data_1VI3 # _entry.id 1VI3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1VI3 pdb_00001vi3 10.2210/pdb1vi3/pdb RCSB RCSB001893 ? ? WWPDB D_1000001893 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-12-30 2 'Structure model' 1 1 2008-04-26 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-04 5 'Structure model' 1 4 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' struct_conn 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.name' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1VI3 _pdbx_database_status.recvd_initial_deposition_date 2003-12-01 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Structural GenomiX' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Structural analysis of a set of proteins resulting from a bacterial genomics project' _citation.journal_abbrev Proteins _citation.journal_volume 60 _citation.page_first 787 _citation.page_last 796 _citation.year 2005 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16021622 _citation.pdbx_database_id_DOI 10.1002/prot.20541 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Badger, J.' 1 ? primary 'Sauder, J.M.' 2 ? primary 'Adams, J.M.' 3 ? primary 'Antonysamy, S.' 4 ? primary 'Bain, K.' 5 ? primary 'Bergseid, M.G.' 6 ? primary 'Buchanan, S.G.' 7 ? primary 'Buchanan, M.D.' 8 ? primary 'Batiyenko, Y.' 9 ? primary 'Christopher, J.A.' 10 ? primary 'Emtage, S.' 11 ? primary 'Eroshkina, A.' 12 ? primary 'Feil, I.' 13 ? primary 'Furlong, E.B.' 14 ? primary 'Gajiwala, K.S.' 15 ? primary 'Gao, X.' 16 ? primary 'He, D.' 17 ? primary 'Hendle, J.' 18 ? primary 'Huber, A.' 19 ? primary 'Hoda, K.' 20 ? primary 'Kearins, P.' 21 ? primary 'Kissinger, C.' 22 ? primary 'Laubert, B.' 23 ? primary 'Lewis, H.A.' 24 ? primary 'Lin, J.' 25 ? primary 'Loomis, K.' 26 ? primary 'Lorimer, D.' 27 ? primary 'Louie, G.' 28 ? primary 'Maletic, M.' 29 ? primary 'Marsh, C.D.' 30 ? primary 'Miller, I.' 31 ? primary 'Molinari, J.' 32 ? primary 'Muller-Dieckmann, H.J.' 33 ? primary 'Newman, J.M.' 34 ? primary 'Noland, B.W.' 35 ? primary 'Pagarigan, B.' 36 ? primary 'Park, F.' 37 ? primary 'Peat, T.S.' 38 ? primary 'Post, K.W.' 39 ? primary 'Radojicic, S.' 40 ? primary 'Ramos, A.' 41 ? primary 'Romero, R.' 42 ? primary 'Rutter, M.E.' 43 ? primary 'Sanderson, W.E.' 44 ? primary 'Schwinn, K.D.' 45 ? primary 'Tresser, J.' 46 ? primary 'Winhoven, J.' 47 ? primary 'Wright, T.A.' 48 ? primary 'Wu, L.' 49 ? primary 'Xu, J.' 50 ? primary 'Harris, T.J.' 51 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein ybhB' 18697.980 1 ? ? ? ? 2 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 3 water nat water 18.015 224 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)SLKLISNDLRDGDKLPHRHVFNG(MSE)GYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLP ADTRVLPQGFGSGLVA(MSE)PDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGA(MSE)VGFN VHFHSLASASITA(MSE)FSEGGSHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MSLKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQ GFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMFS EGGSHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ACETATE ION' ACT 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 SER n 1 3 LEU n 1 4 LYS n 1 5 LEU n 1 6 ILE n 1 7 SER n 1 8 ASN n 1 9 ASP n 1 10 LEU n 1 11 ARG n 1 12 ASP n 1 13 GLY n 1 14 ASP n 1 15 LYS n 1 16 LEU n 1 17 PRO n 1 18 HIS n 1 19 ARG n 1 20 HIS n 1 21 VAL n 1 22 PHE n 1 23 ASN n 1 24 GLY n 1 25 MSE n 1 26 GLY n 1 27 TYR n 1 28 ASP n 1 29 GLY n 1 30 ASP n 1 31 ASN n 1 32 ILE n 1 33 SER n 1 34 PRO n 1 35 HIS n 1 36 LEU n 1 37 ALA n 1 38 TRP n 1 39 ASP n 1 40 ASP n 1 41 VAL n 1 42 PRO n 1 43 ALA n 1 44 GLY n 1 45 THR n 1 46 LYS n 1 47 SER n 1 48 PHE n 1 49 VAL n 1 50 VAL n 1 51 THR n 1 52 CYS n 1 53 TYR n 1 54 ASP n 1 55 PRO n 1 56 ASP n 1 57 ALA n 1 58 PRO n 1 59 THR n 1 60 GLY n 1 61 SER n 1 62 GLY n 1 63 TRP n 1 64 TRP n 1 65 HIS n 1 66 TRP n 1 67 VAL n 1 68 VAL n 1 69 VAL n 1 70 ASN n 1 71 LEU n 1 72 PRO n 1 73 ALA n 1 74 ASP n 1 75 THR n 1 76 ARG n 1 77 VAL n 1 78 LEU n 1 79 PRO n 1 80 GLN n 1 81 GLY n 1 82 PHE n 1 83 GLY n 1 84 SER n 1 85 GLY n 1 86 LEU n 1 87 VAL n 1 88 ALA n 1 89 MSE n 1 90 PRO n 1 91 ASP n 1 92 GLY n 1 93 VAL n 1 94 LEU n 1 95 GLN n 1 96 THR n 1 97 ARG n 1 98 THR n 1 99 ASP n 1 100 PHE n 1 101 GLY n 1 102 LYS n 1 103 THR n 1 104 GLY n 1 105 TYR n 1 106 ASP n 1 107 GLY n 1 108 ALA n 1 109 ALA n 1 110 PRO n 1 111 PRO n 1 112 LYS n 1 113 GLY n 1 114 GLU n 1 115 THR n 1 116 HIS n 1 117 ARG n 1 118 TYR n 1 119 ILE n 1 120 PHE n 1 121 THR n 1 122 VAL n 1 123 HIS n 1 124 ALA n 1 125 LEU n 1 126 ASP n 1 127 ILE n 1 128 GLU n 1 129 ARG n 1 130 ILE n 1 131 ASP n 1 132 VAL n 1 133 ASP n 1 134 GLU n 1 135 GLY n 1 136 ALA n 1 137 SER n 1 138 GLY n 1 139 ALA n 1 140 MSE n 1 141 VAL n 1 142 GLY n 1 143 PHE n 1 144 ASN n 1 145 VAL n 1 146 HIS n 1 147 PHE n 1 148 HIS n 1 149 SER n 1 150 LEU n 1 151 ALA n 1 152 SER n 1 153 ALA n 1 154 SER n 1 155 ILE n 1 156 THR n 1 157 ALA n 1 158 MSE n 1 159 PHE n 1 160 SER n 1 161 GLU n 1 162 GLY n 1 163 GLY n 1 164 SER n 1 165 HIS n 1 166 HIS n 1 167 HIS n 1 168 HIS n 1 169 HIS n 1 170 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene 'YBHB, B0773' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -1 ? ? ? A . n A 1 2 SER 2 0 0 SER SER A . n A 1 3 LEU 3 1 1 LEU LEU A . n A 1 4 LYS 4 2 2 LYS LYS A . n A 1 5 LEU 5 3 3 LEU LEU A . n A 1 6 ILE 6 4 4 ILE ILE A . n A 1 7 SER 7 5 5 SER SER A . n A 1 8 ASN 8 6 6 ASN ASN A . n A 1 9 ASP 9 7 7 ASP ASP A . n A 1 10 LEU 10 8 8 LEU LEU A . n A 1 11 ARG 11 9 9 ARG ARG A . n A 1 12 ASP 12 10 10 ASP ASP A . n A 1 13 GLY 13 11 11 GLY GLY A . n A 1 14 ASP 14 12 12 ASP ASP A . n A 1 15 LYS 15 13 13 LYS LYS A . n A 1 16 LEU 16 14 14 LEU LEU A . n A 1 17 PRO 17 15 15 PRO PRO A . n A 1 18 HIS 18 16 16 HIS HIS A . n A 1 19 ARG 19 17 17 ARG ARG A . n A 1 20 HIS 20 18 18 HIS HIS A . n A 1 21 VAL 21 19 19 VAL VAL A . n A 1 22 PHE 22 20 20 PHE PHE A . n A 1 23 ASN 23 21 21 ASN ASN A . n A 1 24 GLY 24 22 22 GLY GLY A . n A 1 25 MSE 25 23 23 MSE MSE A . n A 1 26 GLY 26 24 24 GLY GLY A . n A 1 27 TYR 27 25 25 TYR TYR A . n A 1 28 ASP 28 26 26 ASP ASP A . n A 1 29 GLY 29 27 27 GLY GLY A . n A 1 30 ASP 30 28 28 ASP ASP A . n A 1 31 ASN 31 29 29 ASN ASN A . n A 1 32 ILE 32 30 30 ILE ILE A . n A 1 33 SER 33 31 31 SER SER A . n A 1 34 PRO 34 32 32 PRO PRO A . n A 1 35 HIS 35 33 33 HIS HIS A . n A 1 36 LEU 36 34 34 LEU LEU A . n A 1 37 ALA 37 35 35 ALA ALA A . n A 1 38 TRP 38 36 36 TRP TRP A . n A 1 39 ASP 39 37 37 ASP ASP A . n A 1 40 ASP 40 38 38 ASP ASP A . n A 1 41 VAL 41 39 39 VAL VAL A . n A 1 42 PRO 42 40 40 PRO PRO A . n A 1 43 ALA 43 41 41 ALA ALA A . n A 1 44 GLY 44 42 42 GLY GLY A . n A 1 45 THR 45 43 43 THR THR A . n A 1 46 LYS 46 44 44 LYS LYS A . n A 1 47 SER 47 45 45 SER SER A . n A 1 48 PHE 48 46 46 PHE PHE A . n A 1 49 VAL 49 47 47 VAL VAL A . n A 1 50 VAL 50 48 48 VAL VAL A . n A 1 51 THR 51 49 49 THR THR A . n A 1 52 CYS 52 50 50 CYS CYS A . n A 1 53 TYR 53 51 51 TYR TYR A . n A 1 54 ASP 54 52 52 ASP ASP A . n A 1 55 PRO 55 53 53 PRO PRO A . n A 1 56 ASP 56 54 54 ASP ASP A . n A 1 57 ALA 57 55 55 ALA ALA A . n A 1 58 PRO 58 56 56 PRO PRO A . n A 1 59 THR 59 57 57 THR THR A . n A 1 60 GLY 60 58 58 GLY GLY A . n A 1 61 SER 61 59 59 SER SER A . n A 1 62 GLY 62 60 60 GLY GLY A . n A 1 63 TRP 63 61 61 TRP TRP A . n A 1 64 TRP 64 62 62 TRP TRP A . n A 1 65 HIS 65 63 63 HIS HIS A . n A 1 66 TRP 66 64 64 TRP TRP A . n A 1 67 VAL 67 65 65 VAL VAL A . n A 1 68 VAL 68 66 66 VAL VAL A . n A 1 69 VAL 69 67 67 VAL VAL A . n A 1 70 ASN 70 68 68 ASN ASN A . n A 1 71 LEU 71 69 69 LEU LEU A . n A 1 72 PRO 72 70 70 PRO PRO A . n A 1 73 ALA 73 71 71 ALA ALA A . n A 1 74 ASP 74 72 72 ASP ASP A . n A 1 75 THR 75 73 73 THR THR A . n A 1 76 ARG 76 74 74 ARG ARG A . n A 1 77 VAL 77 75 75 VAL VAL A . n A 1 78 LEU 78 76 76 LEU LEU A . n A 1 79 PRO 79 77 77 PRO PRO A . n A 1 80 GLN 80 78 78 GLN GLN A . n A 1 81 GLY 81 79 79 GLY GLY A . n A 1 82 PHE 82 80 80 PHE PHE A . n A 1 83 GLY 83 81 81 GLY GLY A . n A 1 84 SER 84 82 82 SER SER A . n A 1 85 GLY 85 83 83 GLY GLY A . n A 1 86 LEU 86 84 84 LEU LEU A . n A 1 87 VAL 87 85 85 VAL VAL A . n A 1 88 ALA 88 86 86 ALA ALA A . n A 1 89 MSE 89 87 87 MSE MSE A . n A 1 90 PRO 90 88 88 PRO PRO A . n A 1 91 ASP 91 89 89 ASP ASP A . n A 1 92 GLY 92 90 90 GLY GLY A . n A 1 93 VAL 93 91 91 VAL VAL A . n A 1 94 LEU 94 92 92 LEU LEU A . n A 1 95 GLN 95 93 93 GLN GLN A . n A 1 96 THR 96 94 94 THR THR A . n A 1 97 ARG 97 95 95 ARG ARG A . n A 1 98 THR 98 96 96 THR THR A . n A 1 99 ASP 99 97 97 ASP ASP A . n A 1 100 PHE 100 98 98 PHE PHE A . n A 1 101 GLY 101 99 99 GLY GLY A . n A 1 102 LYS 102 100 100 LYS LYS A . n A 1 103 THR 103 101 101 THR THR A . n A 1 104 GLY 104 102 102 GLY GLY A . n A 1 105 TYR 105 103 103 TYR TYR A . n A 1 106 ASP 106 104 104 ASP ASP A . n A 1 107 GLY 107 105 105 GLY GLY A . n A 1 108 ALA 108 106 106 ALA ALA A . n A 1 109 ALA 109 107 107 ALA ALA A . n A 1 110 PRO 110 108 108 PRO PRO A . n A 1 111 PRO 111 109 109 PRO PRO A . n A 1 112 LYS 112 110 110 LYS LYS A . n A 1 113 GLY 113 111 111 GLY GLY A . n A 1 114 GLU 114 112 112 GLU GLU A . n A 1 115 THR 115 113 113 THR THR A . n A 1 116 HIS 116 114 114 HIS HIS A . n A 1 117 ARG 117 115 115 ARG ARG A . n A 1 118 TYR 118 116 116 TYR TYR A . n A 1 119 ILE 119 117 117 ILE ILE A . n A 1 120 PHE 120 118 118 PHE PHE A . n A 1 121 THR 121 119 119 THR THR A . n A 1 122 VAL 122 120 120 VAL VAL A . n A 1 123 HIS 123 121 121 HIS HIS A . n A 1 124 ALA 124 122 122 ALA ALA A . n A 1 125 LEU 125 123 123 LEU LEU A . n A 1 126 ASP 126 124 124 ASP ASP A . n A 1 127 ILE 127 125 125 ILE ILE A . n A 1 128 GLU 128 126 126 GLU GLU A . n A 1 129 ARG 129 127 127 ARG ARG A . n A 1 130 ILE 130 128 128 ILE ILE A . n A 1 131 ASP 131 129 129 ASP ASP A . n A 1 132 VAL 132 130 130 VAL VAL A . n A 1 133 ASP 133 131 131 ASP ASP A . n A 1 134 GLU 134 132 132 GLU GLU A . n A 1 135 GLY 135 133 133 GLY GLY A . n A 1 136 ALA 136 134 134 ALA ALA A . n A 1 137 SER 137 135 135 SER SER A . n A 1 138 GLY 138 136 136 GLY GLY A . n A 1 139 ALA 139 137 137 ALA ALA A . n A 1 140 MSE 140 138 138 MSE MSE A . n A 1 141 VAL 141 139 139 VAL VAL A . n A 1 142 GLY 142 140 140 GLY GLY A . n A 1 143 PHE 143 141 141 PHE PHE A . n A 1 144 ASN 144 142 142 ASN ASN A . n A 1 145 VAL 145 143 143 VAL VAL A . n A 1 146 HIS 146 144 144 HIS HIS A . n A 1 147 PHE 147 145 145 PHE PHE A . n A 1 148 HIS 148 146 146 HIS HIS A . n A 1 149 SER 149 147 147 SER SER A . n A 1 150 LEU 150 148 148 LEU LEU A . n A 1 151 ALA 151 149 149 ALA ALA A . n A 1 152 SER 152 150 150 SER SER A . n A 1 153 ALA 153 151 151 ALA ALA A . n A 1 154 SER 154 152 152 SER SER A . n A 1 155 ILE 155 153 153 ILE ILE A . n A 1 156 THR 156 154 154 THR THR A . n A 1 157 ALA 157 155 155 ALA ALA A . n A 1 158 MSE 158 156 156 MSE MSE A . n A 1 159 PHE 159 157 157 PHE PHE A . n A 1 160 SER 160 158 158 SER SER A . n A 1 161 GLU 161 159 159 GLU GLU A . n A 1 162 GLY 162 160 ? ? ? A . n A 1 163 GLY 163 161 ? ? ? A . n A 1 164 SER 164 162 ? ? ? A . n A 1 165 HIS 165 163 ? ? ? A . n A 1 166 HIS 166 164 ? ? ? A . n A 1 167 HIS 167 165 ? ? ? A . n A 1 168 HIS 168 166 ? ? ? A . n A 1 169 HIS 169 167 ? ? ? A . n A 1 170 HIS 170 168 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT 1 169 1 ACT ACT A . C 3 HOH 1 170 2 HOH HOH A . C 3 HOH 2 171 3 HOH HOH A . C 3 HOH 3 172 4 HOH HOH A . C 3 HOH 4 173 5 HOH HOH A . C 3 HOH 5 174 6 HOH HOH A . C 3 HOH 6 175 7 HOH HOH A . C 3 HOH 7 176 8 HOH HOH A . C 3 HOH 8 177 9 HOH HOH A . C 3 HOH 9 178 10 HOH HOH A . C 3 HOH 10 179 11 HOH HOH A . C 3 HOH 11 180 12 HOH HOH A . C 3 HOH 12 181 13 HOH HOH A . C 3 HOH 13 182 14 HOH HOH A . C 3 HOH 14 183 15 HOH HOH A . C 3 HOH 15 184 16 HOH HOH A . C 3 HOH 16 185 17 HOH HOH A . C 3 HOH 17 186 18 HOH HOH A . C 3 HOH 18 187 19 HOH HOH A . C 3 HOH 19 188 20 HOH HOH A . C 3 HOH 20 189 21 HOH HOH A . C 3 HOH 21 190 22 HOH HOH A . C 3 HOH 22 191 23 HOH HOH A . C 3 HOH 23 192 24 HOH HOH A . C 3 HOH 24 193 25 HOH HOH A . C 3 HOH 25 194 26 HOH HOH A . C 3 HOH 26 195 27 HOH HOH A . C 3 HOH 27 196 28 HOH HOH A . C 3 HOH 28 197 29 HOH HOH A . C 3 HOH 29 198 30 HOH HOH A . C 3 HOH 30 199 31 HOH HOH A . C 3 HOH 31 200 32 HOH HOH A . C 3 HOH 32 201 33 HOH HOH A . C 3 HOH 33 202 34 HOH HOH A . C 3 HOH 34 203 35 HOH HOH A . C 3 HOH 35 204 36 HOH HOH A . C 3 HOH 36 205 37 HOH HOH A . C 3 HOH 37 206 38 HOH HOH A . C 3 HOH 38 207 39 HOH HOH A . C 3 HOH 39 208 40 HOH HOH A . C 3 HOH 40 209 41 HOH HOH A . C 3 HOH 41 210 42 HOH HOH A . C 3 HOH 42 211 43 HOH HOH A . C 3 HOH 43 212 44 HOH HOH A . C 3 HOH 44 213 45 HOH HOH A . C 3 HOH 45 214 46 HOH HOH A . C 3 HOH 46 215 47 HOH HOH A . C 3 HOH 47 216 48 HOH HOH A . C 3 HOH 48 217 49 HOH HOH A . C 3 HOH 49 218 50 HOH HOH A . C 3 HOH 50 219 51 HOH HOH A . C 3 HOH 51 220 52 HOH HOH A . C 3 HOH 52 221 53 HOH HOH A . C 3 HOH 53 222 54 HOH HOH A . C 3 HOH 54 223 55 HOH HOH A . C 3 HOH 55 224 56 HOH HOH A . C 3 HOH 56 225 57 HOH HOH A . C 3 HOH 57 226 58 HOH HOH A . C 3 HOH 58 227 59 HOH HOH A . C 3 HOH 59 228 60 HOH HOH A . C 3 HOH 60 229 61 HOH HOH A . C 3 HOH 61 230 62 HOH HOH A . C 3 HOH 62 231 63 HOH HOH A . C 3 HOH 63 232 64 HOH HOH A . C 3 HOH 64 233 65 HOH HOH A . C 3 HOH 65 234 66 HOH HOH A . C 3 HOH 66 235 67 HOH HOH A . C 3 HOH 67 236 68 HOH HOH A . C 3 HOH 68 237 69 HOH HOH A . C 3 HOH 69 238 70 HOH HOH A . C 3 HOH 70 239 71 HOH HOH A . C 3 HOH 71 240 72 HOH HOH A . C 3 HOH 72 241 73 HOH HOH A . C 3 HOH 73 242 74 HOH HOH A . C 3 HOH 74 243 75 HOH HOH A . C 3 HOH 75 244 76 HOH HOH A . C 3 HOH 76 245 77 HOH HOH A . C 3 HOH 77 246 78 HOH HOH A . C 3 HOH 78 247 79 HOH HOH A . C 3 HOH 79 248 80 HOH HOH A . C 3 HOH 80 249 81 HOH HOH A . C 3 HOH 81 250 82 HOH HOH A . C 3 HOH 82 251 83 HOH HOH A . C 3 HOH 83 252 84 HOH HOH A . C 3 HOH 84 253 85 HOH HOH A . C 3 HOH 85 254 86 HOH HOH A . C 3 HOH 86 255 87 HOH HOH A . C 3 HOH 87 256 88 HOH HOH A . C 3 HOH 88 257 89 HOH HOH A . C 3 HOH 89 258 90 HOH HOH A . C 3 HOH 90 259 91 HOH HOH A . C 3 HOH 91 260 92 HOH HOH A . C 3 HOH 92 261 93 HOH HOH A . C 3 HOH 93 262 94 HOH HOH A . C 3 HOH 94 263 95 HOH HOH A . C 3 HOH 95 264 96 HOH HOH A . C 3 HOH 96 265 97 HOH HOH A . C 3 HOH 97 266 98 HOH HOH A . C 3 HOH 98 267 99 HOH HOH A . C 3 HOH 99 268 100 HOH HOH A . C 3 HOH 100 269 101 HOH HOH A . C 3 HOH 101 270 102 HOH HOH A . C 3 HOH 102 271 103 HOH HOH A . C 3 HOH 103 272 104 HOH HOH A . C 3 HOH 104 273 105 HOH HOH A . C 3 HOH 105 274 106 HOH HOH A . C 3 HOH 106 275 107 HOH HOH A . C 3 HOH 107 276 108 HOH HOH A . C 3 HOH 108 277 109 HOH HOH A . C 3 HOH 109 278 110 HOH HOH A . C 3 HOH 110 279 111 HOH HOH A . C 3 HOH 111 280 112 HOH HOH A . C 3 HOH 112 281 113 HOH HOH A . C 3 HOH 113 282 114 HOH HOH A . C 3 HOH 114 283 115 HOH HOH A . C 3 HOH 115 284 116 HOH HOH A . C 3 HOH 116 285 117 HOH HOH A . C 3 HOH 117 286 118 HOH HOH A . C 3 HOH 118 287 119 HOH HOH A . C 3 HOH 119 288 120 HOH HOH A . C 3 HOH 120 289 121 HOH HOH A . C 3 HOH 121 290 122 HOH HOH A . C 3 HOH 122 291 123 HOH HOH A . C 3 HOH 123 292 124 HOH HOH A . C 3 HOH 124 293 125 HOH HOH A . C 3 HOH 125 294 126 HOH HOH A . C 3 HOH 126 295 127 HOH HOH A . C 3 HOH 127 296 128 HOH HOH A . C 3 HOH 128 297 129 HOH HOH A . C 3 HOH 129 298 130 HOH HOH A . C 3 HOH 130 299 131 HOH HOH A . C 3 HOH 131 300 132 HOH HOH A . C 3 HOH 132 301 133 HOH HOH A . C 3 HOH 133 302 134 HOH HOH A . C 3 HOH 134 303 135 HOH HOH A . C 3 HOH 135 304 136 HOH HOH A . C 3 HOH 136 305 137 HOH HOH A . C 3 HOH 137 306 138 HOH HOH A . C 3 HOH 138 307 139 HOH HOH A . C 3 HOH 139 308 140 HOH HOH A . C 3 HOH 140 309 141 HOH HOH A . C 3 HOH 141 310 142 HOH HOH A . C 3 HOH 142 311 143 HOH HOH A . C 3 HOH 143 312 144 HOH HOH A . C 3 HOH 144 313 145 HOH HOH A . C 3 HOH 145 314 146 HOH HOH A . C 3 HOH 146 315 147 HOH HOH A . C 3 HOH 147 316 148 HOH HOH A . C 3 HOH 148 317 149 HOH HOH A . C 3 HOH 149 318 150 HOH HOH A . C 3 HOH 150 319 151 HOH HOH A . C 3 HOH 151 320 152 HOH HOH A . C 3 HOH 152 321 153 HOH HOH A . C 3 HOH 153 322 154 HOH HOH A . C 3 HOH 154 323 155 HOH HOH A . C 3 HOH 155 324 156 HOH HOH A . C 3 HOH 156 325 157 HOH HOH A . C 3 HOH 157 326 158 HOH HOH A . C 3 HOH 158 327 159 HOH HOH A . C 3 HOH 159 328 160 HOH HOH A . C 3 HOH 160 329 161 HOH HOH A . C 3 HOH 161 330 162 HOH HOH A . C 3 HOH 162 331 163 HOH HOH A . C 3 HOH 163 332 164 HOH HOH A . C 3 HOH 164 333 165 HOH HOH A . C 3 HOH 165 334 166 HOH HOH A . C 3 HOH 166 335 167 HOH HOH A . C 3 HOH 167 336 168 HOH HOH A . C 3 HOH 168 337 169 HOH HOH A . C 3 HOH 169 338 170 HOH HOH A . C 3 HOH 170 339 171 HOH HOH A . C 3 HOH 171 340 172 HOH HOH A . C 3 HOH 172 341 173 HOH HOH A . C 3 HOH 173 342 174 HOH HOH A . C 3 HOH 174 343 175 HOH HOH A . C 3 HOH 175 344 176 HOH HOH A . C 3 HOH 176 345 177 HOH HOH A . C 3 HOH 177 346 178 HOH HOH A . C 3 HOH 178 347 179 HOH HOH A . C 3 HOH 179 348 180 HOH HOH A . C 3 HOH 180 349 181 HOH HOH A . C 3 HOH 181 350 182 HOH HOH A . C 3 HOH 182 351 183 HOH HOH A . C 3 HOH 183 352 184 HOH HOH A . C 3 HOH 184 353 185 HOH HOH A . C 3 HOH 185 354 186 HOH HOH A . C 3 HOH 186 355 187 HOH HOH A . C 3 HOH 187 356 188 HOH HOH A . C 3 HOH 188 357 189 HOH HOH A . C 3 HOH 189 358 190 HOH HOH A . C 3 HOH 190 359 191 HOH HOH A . C 3 HOH 191 360 192 HOH HOH A . C 3 HOH 192 361 193 HOH HOH A . C 3 HOH 193 362 194 HOH HOH A . C 3 HOH 194 363 195 HOH HOH A . C 3 HOH 195 364 196 HOH HOH A . C 3 HOH 196 365 197 HOH HOH A . C 3 HOH 197 366 198 HOH HOH A . C 3 HOH 198 367 199 HOH HOH A . C 3 HOH 199 368 200 HOH HOH A . C 3 HOH 200 369 201 HOH HOH A . C 3 HOH 201 370 202 HOH HOH A . C 3 HOH 202 371 203 HOH HOH A . C 3 HOH 203 372 204 HOH HOH A . C 3 HOH 204 373 205 HOH HOH A . C 3 HOH 205 374 206 HOH HOH A . C 3 HOH 206 375 207 HOH HOH A . C 3 HOH 207 376 208 HOH HOH A . C 3 HOH 208 377 209 HOH HOH A . C 3 HOH 209 378 210 HOH HOH A . C 3 HOH 210 379 211 HOH HOH A . C 3 HOH 211 380 212 HOH HOH A . C 3 HOH 212 381 213 HOH HOH A . C 3 HOH 213 382 214 HOH HOH A . C 3 HOH 214 383 215 HOH HOH A . C 3 HOH 215 384 216 HOH HOH A . C 3 HOH 216 385 217 HOH HOH A . C 3 HOH 217 386 218 HOH HOH A . C 3 HOH 218 387 219 HOH HOH A . C 3 HOH 219 388 220 HOH HOH A . C 3 HOH 220 389 221 HOH HOH A . C 3 HOH 221 390 222 HOH HOH A . C 3 HOH 222 391 223 HOH HOH A . C 3 HOH 223 392 224 HOH HOH A . C 3 HOH 224 393 225 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 9 ? CD ? A ARG 11 CD 2 1 Y 1 A ARG 9 ? NE ? A ARG 11 NE 3 1 Y 1 A ARG 9 ? CZ ? A ARG 11 CZ 4 1 Y 1 A ARG 9 ? NH1 ? A ARG 11 NH1 5 1 Y 1 A ARG 9 ? NH2 ? A ARG 11 NH2 6 1 Y 1 A LYS 13 ? CD ? A LYS 15 CD 7 1 Y 1 A LYS 13 ? CE ? A LYS 15 CE 8 1 Y 1 A LYS 13 ? NZ ? A LYS 15 NZ 9 1 Y 1 A LYS 110 ? CG ? A LYS 112 CG 10 1 Y 1 A LYS 110 ? CD ? A LYS 112 CD 11 1 Y 1 A LYS 110 ? CE ? A LYS 112 CE 12 1 Y 1 A LYS 110 ? NZ ? A LYS 112 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MOSFLM 'data reduction' . ? 1 SCALA 'data scaling' . ? 2 TRUNCATE 'data reduction' . ? 3 REFMAC refinement 4.0 ? 4 CCP4 'data scaling' '(SCALA' ? 5 TRUNCATE 'data scaling' . ? 6 # _cell.entry_id 1VI3 _cell.length_a 85.418 _cell.length_b 85.418 _cell.length_c 73.243 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VI3 _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.Int_Tables_number 154 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? # _exptl.entry_id 1VI3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.13 _exptl_crystal.density_percent_sol 70.18 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.crystal_id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 32-ID' _diffrn_source.pdbx_wavelength_list 0.9795 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 32-ID _diffrn_source.pdbx_wavelength ? # _reflns.entry_id 1VI3 _reflns.number_all 30552 _reflns.number_obs 30552 _reflns.d_resolution_low 36.99 _reflns.d_resolution_high 1.76 _reflns.percent_possible_obs 99.2 _reflns.pdbx_redundancy 19.5 _reflns.pdbx_Rmerge_I_obs 0.077 _reflns.pdbx_netI_over_sigmaI 19.7 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? # _reflns_shell.d_res_low 1.86 _reflns_shell.d_res_high 1.76 _reflns_shell.meanI_over_sigI_obs 3.1 _reflns_shell.Rmerge_I_obs 0.741 _reflns_shell.percent_possible_all 94.9 _reflns_shell.pdbx_redundancy 11.2 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_Rsym_value ? # _refine.entry_id 1VI3 _refine.pdbx_method_to_determine_struct 'Se-Met SAD phasing' _refine.ls_d_res_low 36.99 _refine.ls_d_res_high 1.76 _refine.solvent_model_details 'Babinet bulk solvent correction' _refine.solvent_model_param_ksol 0.992 _refine.solvent_model_param_bsol 284.844 _refine.aniso_B[1][1] 1.794 _refine.aniso_B[1][2] 0.897 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][2] 1.794 _refine.aniso_B[2][3] 0.000 _refine.aniso_B[3][3] -2.691 _refine.B_iso_mean 30.117 _refine.ls_number_reflns_obs 30551 _refine.ls_number_reflns_R_free 1542 _refine.ls_R_factor_R_work 0.192 _refine.ls_R_factor_R_free 0.217 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1215 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 224 _refine_hist.number_atoms_total 1443 _refine_hist.d_res_high 1.76 _refine_hist.d_res_low 36.99 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.pdbx_refine_id _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function p_bond_d 0.013 'X-RAY DIFFRACTION' ? ? ? ? p_angle_d 2.271 'X-RAY DIFFRACTION' ? ? ? ? p_planar_tor 3.015 'X-RAY DIFFRACTION' ? ? ? ? p_chiral_restr 0.165 'X-RAY DIFFRACTION' ? ? ? ? p_plane_restr 0.013 'X-RAY DIFFRACTION' ? ? ? ? p_mcbond_it 1.606 'X-RAY DIFFRACTION' ? ? ? ? p_mcangle_it 2.801 'X-RAY DIFFRACTION' ? ? ? ? p_scbond_it 2.972 'X-RAY DIFFRACTION' ? ? ? ? p_scangle_it 4.406 'X-RAY DIFFRACTION' ? ? ? ? # _struct.entry_id 1VI3 _struct.title 'Crystal structure of an hypothetical protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1VI3 _struct_keywords.pdbx_keywords 'Structural genomics, unknown function' _struct_keywords.text 'structural genomics, unknown function' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name UNP _struct_ref.db_code YBHB_ECOLI _struct_ref.pdbx_db_accession P12994 _struct_ref.pdbx_seq_one_letter_code ;MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGF GSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMFS ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1VI3 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 160 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P12994 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 158 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 158 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1VI3 MSE A 1 ? UNP P12994 ? ? 'cloning artifact' -1 1 1 1VI3 SER A 2 ? UNP P12994 ? ? 'cloning artifact' 0 2 1 1VI3 LEU A 3 ? UNP P12994 ? ? 'cloning artifact' 1 3 1 1VI3 MSE A 25 ? UNP P12994 MET 23 'modified residue' 23 4 1 1VI3 MSE A 89 ? UNP P12994 MET 87 'modified residue' 87 5 1 1VI3 MSE A 140 ? UNP P12994 MET 138 'modified residue' 138 6 1 1VI3 MSE A 158 ? UNP P12994 MET 156 'modified residue' 156 7 1 1VI3 GLU A 161 ? UNP P12994 ? ? 'cloning artifact' 159 8 1 1VI3 GLY A 162 ? UNP P12994 ? ? 'cloning artifact' 160 9 1 1VI3 GLY A 163 ? UNP P12994 ? ? 'cloning artifact' 161 10 1 1VI3 SER A 164 ? UNP P12994 ? ? 'cloning artifact' 162 11 1 1VI3 HIS A 165 ? UNP P12994 ? ? 'cloning artifact' 163 12 1 1VI3 HIS A 166 ? UNP P12994 ? ? 'cloning artifact' 164 13 1 1VI3 HIS A 167 ? UNP P12994 ? ? 'cloning artifact' 165 14 1 1VI3 HIS A 168 ? UNP P12994 ? ? 'cloning artifact' 166 15 1 1VI3 HIS A 169 ? UNP P12994 ? ? 'cloning artifact' 167 16 1 1VI3 HIS A 170 ? UNP P12994 ? ? 'cloning artifact' 168 17 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 17 ? VAL A 21 ? PRO A 15 VAL A 19 5 ? 5 HELX_P HELX_P2 2 SER A 137 ? HIS A 148 ? SER A 135 HIS A 146 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 24 C ? ? ? 1_555 A MSE 25 N ? ? A GLY 22 A MSE 23 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale2 covale both ? A MSE 25 C ? ? ? 1_555 A GLY 26 N ? ? A MSE 23 A GLY 24 1_555 ? ? ? ? ? ? ? 1.353 ? ? covale3 covale both ? A ALA 88 C ? ? ? 1_555 A MSE 89 N ? ? A ALA 86 A MSE 87 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale4 covale both ? A MSE 89 C ? ? ? 1_555 A PRO 90 N ? ? A MSE 87 A PRO 88 1_555 ? ? ? ? ? ? ? 1.315 ? ? covale5 covale both ? A ALA 139 C ? ? ? 1_555 A MSE 140 N ? ? A ALA 137 A MSE 138 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale6 covale both ? A MSE 140 C ? ? ? 1_555 A VAL 141 N ? ? A MSE 138 A VAL 139 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale7 covale both ? A ALA 157 C ? ? ? 1_555 A MSE 158 N ? ? A ALA 155 A MSE 156 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale8 covale both ? A MSE 158 C ? ? ? 1_555 A PHE 159 N ? ? A MSE 156 A PHE 157 1_555 ? ? ? ? ? ? ? 1.325 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 4 ? ILE A 6 ? LYS A 2 ILE A 4 A 2 LEU A 36 ? ASP A 39 ? LEU A 34 ASP A 37 A 3 VAL A 77 ? LEU A 78 ? VAL A 75 LEU A 76 B 1 LEU A 94 ? GLN A 95 ? LEU A 92 GLN A 93 B 2 TRP A 63 ? PRO A 72 ? TRP A 61 PRO A 70 B 3 SER A 47 ? ASP A 54 ? SER A 45 ASP A 52 B 4 THR A 115 ? LEU A 125 ? THR A 113 LEU A 123 B 5 SER A 149 ? SER A 160 ? SER A 147 SER A 158 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 6 ? N ILE A 4 O ALA A 37 ? O ALA A 35 A 2 3 N LEU A 36 ? N LEU A 34 O LEU A 78 ? O LEU A 76 B 1 2 O LEU A 94 ? O LEU A 92 N VAL A 69 ? N VAL A 67 B 2 3 O VAL A 68 ? O VAL A 66 N VAL A 50 ? N VAL A 48 B 3 4 N SER A 47 ? N SER A 45 O LEU A 125 ? O LEU A 123 B 4 5 N ALA A 124 ? N ALA A 122 O LEU A 150 ? O LEU A 148 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id ACT _struct_site.pdbx_auth_seq_id 169 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 7 _struct_site.details 'BINDING SITE FOR RESIDUE ACT A 169' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 ASP A 54 ? ASP A 52 . ? 1_555 ? 2 AC1 7 TRP A 63 ? TRP A 61 . ? 1_555 ? 3 AC1 7 HIS A 65 ? HIS A 63 . ? 1_555 ? 4 AC1 7 ALA A 109 ? ALA A 107 . ? 1_555 ? 5 AC1 7 PRO A 110 ? PRO A 108 . ? 1_555 ? 6 AC1 7 TYR A 118 ? TYR A 116 . ? 1_555 ? 7 AC1 7 HOH C . ? HOH A 260 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 38 ? ? 61.71 60.47 2 1 SER A 59 ? ? -147.10 22.57 3 1 ALA A 107 ? ? -161.31 64.00 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id ASP _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 7 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 10.26 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 25 A MSE 23 ? MET SELENOMETHIONINE 2 A MSE 89 A MSE 87 ? MET SELENOMETHIONINE 3 A MSE 140 A MSE 138 ? MET SELENOMETHIONINE 4 A MSE 158 A MSE 156 ? MET SELENOMETHIONINE # _refine_B_iso.class all _refine_B_iso.treatment isotropic _refine_B_iso.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_B_iso.details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -1 ? A MSE 1 2 1 Y 1 A GLY 160 ? A GLY 162 3 1 Y 1 A GLY 161 ? A GLY 163 4 1 Y 1 A SER 162 ? A SER 164 5 1 Y 1 A HIS 163 ? A HIS 165 6 1 Y 1 A HIS 164 ? A HIS 166 7 1 Y 1 A HIS 165 ? A HIS 167 8 1 Y 1 A HIS 166 ? A HIS 168 9 1 Y 1 A HIS 167 ? A HIS 169 10 1 Y 1 A HIS 168 ? A HIS 170 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACT C C N N 1 ACT O O N N 2 ACT OXT O N N 3 ACT CH3 C N N 4 ACT H1 H N N 5 ACT H2 H N N 6 ACT H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 CYS N N N N 81 CYS CA C N R 82 CYS C C N N 83 CYS O O N N 84 CYS CB C N N 85 CYS SG S N N 86 CYS OXT O N N 87 CYS H H N N 88 CYS H2 H N N 89 CYS HA H N N 90 CYS HB2 H N N 91 CYS HB3 H N N 92 CYS HG H N N 93 CYS HXT H N N 94 GLN N N N N 95 GLN CA C N S 96 GLN C C N N 97 GLN O O N N 98 GLN CB C N N 99 GLN CG C N N 100 GLN CD C N N 101 GLN OE1 O N N 102 GLN NE2 N N N 103 GLN OXT O N N 104 GLN H H N N 105 GLN H2 H N N 106 GLN HA H N N 107 GLN HB2 H N N 108 GLN HB3 H N N 109 GLN HG2 H N N 110 GLN HG3 H N N 111 GLN HE21 H N N 112 GLN HE22 H N N 113 GLN HXT H N N 114 GLU N N N N 115 GLU CA C N S 116 GLU C C N N 117 GLU O O N N 118 GLU CB C N N 119 GLU CG C N N 120 GLU CD C N N 121 GLU OE1 O N N 122 GLU OE2 O N N 123 GLU OXT O N N 124 GLU H H N N 125 GLU H2 H N N 126 GLU HA H N N 127 GLU HB2 H N N 128 GLU HB3 H N N 129 GLU HG2 H N N 130 GLU HG3 H N N 131 GLU HE2 H N N 132 GLU HXT H N N 133 GLY N N N N 134 GLY CA C N N 135 GLY C C N N 136 GLY O O N N 137 GLY OXT O N N 138 GLY H H N N 139 GLY H2 H N N 140 GLY HA2 H N N 141 GLY HA3 H N N 142 GLY HXT H N N 143 HIS N N N N 144 HIS CA C N S 145 HIS C C N N 146 HIS O O N N 147 HIS CB C N N 148 HIS CG C Y N 149 HIS ND1 N Y N 150 HIS CD2 C Y N 151 HIS CE1 C Y N 152 HIS NE2 N Y N 153 HIS OXT O N N 154 HIS H H N N 155 HIS H2 H N N 156 HIS HA H N N 157 HIS HB2 H N N 158 HIS HB3 H N N 159 HIS HD1 H N N 160 HIS HD2 H N N 161 HIS HE1 H N N 162 HIS HE2 H N N 163 HIS HXT H N N 164 HOH O O N N 165 HOH H1 H N N 166 HOH H2 H N N 167 ILE N N N N 168 ILE CA C N S 169 ILE C C N N 170 ILE O O N N 171 ILE CB C N S 172 ILE CG1 C N N 173 ILE CG2 C N N 174 ILE CD1 C N N 175 ILE OXT O N N 176 ILE H H N N 177 ILE H2 H N N 178 ILE HA H N N 179 ILE HB H N N 180 ILE HG12 H N N 181 ILE HG13 H N N 182 ILE HG21 H N N 183 ILE HG22 H N N 184 ILE HG23 H N N 185 ILE HD11 H N N 186 ILE HD12 H N N 187 ILE HD13 H N N 188 ILE HXT H N N 189 LEU N N N N 190 LEU CA C N S 191 LEU C C N N 192 LEU O O N N 193 LEU CB C N N 194 LEU CG C N N 195 LEU CD1 C N N 196 LEU CD2 C N N 197 LEU OXT O N N 198 LEU H H N N 199 LEU H2 H N N 200 LEU HA H N N 201 LEU HB2 H N N 202 LEU HB3 H N N 203 LEU HG H N N 204 LEU HD11 H N N 205 LEU HD12 H N N 206 LEU HD13 H N N 207 LEU HD21 H N N 208 LEU HD22 H N N 209 LEU HD23 H N N 210 LEU HXT H N N 211 LYS N N N N 212 LYS CA C N S 213 LYS C C N N 214 LYS O O N N 215 LYS CB C N N 216 LYS CG C N N 217 LYS CD C N N 218 LYS CE C N N 219 LYS NZ N N N 220 LYS OXT O N N 221 LYS H H N N 222 LYS H2 H N N 223 LYS HA H N N 224 LYS HB2 H N N 225 LYS HB3 H N N 226 LYS HG2 H N N 227 LYS HG3 H N N 228 LYS HD2 H N N 229 LYS HD3 H N N 230 LYS HE2 H N N 231 LYS HE3 H N N 232 LYS HZ1 H N N 233 LYS HZ2 H N N 234 LYS HZ3 H N N 235 LYS HXT H N N 236 MET N N N N 237 MET CA C N S 238 MET C C N N 239 MET O O N N 240 MET CB C N N 241 MET CG C N N 242 MET SD S N N 243 MET CE C N N 244 MET OXT O N N 245 MET H H N N 246 MET H2 H N N 247 MET HA H N N 248 MET HB2 H N N 249 MET HB3 H N N 250 MET HG2 H N N 251 MET HG3 H N N 252 MET HE1 H N N 253 MET HE2 H N N 254 MET HE3 H N N 255 MET HXT H N N 256 MSE N N N N 257 MSE CA C N S 258 MSE C C N N 259 MSE O O N N 260 MSE OXT O N N 261 MSE CB C N N 262 MSE CG C N N 263 MSE SE SE N N 264 MSE CE C N N 265 MSE H H N N 266 MSE H2 H N N 267 MSE HA H N N 268 MSE HXT H N N 269 MSE HB2 H N N 270 MSE HB3 H N N 271 MSE HG2 H N N 272 MSE HG3 H N N 273 MSE HE1 H N N 274 MSE HE2 H N N 275 MSE HE3 H N N 276 PHE N N N N 277 PHE CA C N S 278 PHE C C N N 279 PHE O O N N 280 PHE CB C N N 281 PHE CG C Y N 282 PHE CD1 C Y N 283 PHE CD2 C Y N 284 PHE CE1 C Y N 285 PHE CE2 C Y N 286 PHE CZ C Y N 287 PHE OXT O N N 288 PHE H H N N 289 PHE H2 H N N 290 PHE HA H N N 291 PHE HB2 H N N 292 PHE HB3 H N N 293 PHE HD1 H N N 294 PHE HD2 H N N 295 PHE HE1 H N N 296 PHE HE2 H N N 297 PHE HZ H N N 298 PHE HXT H N N 299 PRO N N N N 300 PRO CA C N S 301 PRO C C N N 302 PRO O O N N 303 PRO CB C N N 304 PRO CG C N N 305 PRO CD C N N 306 PRO OXT O N N 307 PRO H H N N 308 PRO HA H N N 309 PRO HB2 H N N 310 PRO HB3 H N N 311 PRO HG2 H N N 312 PRO HG3 H N N 313 PRO HD2 H N N 314 PRO HD3 H N N 315 PRO HXT H N N 316 SER N N N N 317 SER CA C N S 318 SER C C N N 319 SER O O N N 320 SER CB C N N 321 SER OG O N N 322 SER OXT O N N 323 SER H H N N 324 SER H2 H N N 325 SER HA H N N 326 SER HB2 H N N 327 SER HB3 H N N 328 SER HG H N N 329 SER HXT H N N 330 THR N N N N 331 THR CA C N S 332 THR C C N N 333 THR O O N N 334 THR CB C N R 335 THR OG1 O N N 336 THR CG2 C N N 337 THR OXT O N N 338 THR H H N N 339 THR H2 H N N 340 THR HA H N N 341 THR HB H N N 342 THR HG1 H N N 343 THR HG21 H N N 344 THR HG22 H N N 345 THR HG23 H N N 346 THR HXT H N N 347 TRP N N N N 348 TRP CA C N S 349 TRP C C N N 350 TRP O O N N 351 TRP CB C N N 352 TRP CG C Y N 353 TRP CD1 C Y N 354 TRP CD2 C Y N 355 TRP NE1 N Y N 356 TRP CE2 C Y N 357 TRP CE3 C Y N 358 TRP CZ2 C Y N 359 TRP CZ3 C Y N 360 TRP CH2 C Y N 361 TRP OXT O N N 362 TRP H H N N 363 TRP H2 H N N 364 TRP HA H N N 365 TRP HB2 H N N 366 TRP HB3 H N N 367 TRP HD1 H N N 368 TRP HE1 H N N 369 TRP HE3 H N N 370 TRP HZ2 H N N 371 TRP HZ3 H N N 372 TRP HH2 H N N 373 TRP HXT H N N 374 TYR N N N N 375 TYR CA C N S 376 TYR C C N N 377 TYR O O N N 378 TYR CB C N N 379 TYR CG C Y N 380 TYR CD1 C Y N 381 TYR CD2 C Y N 382 TYR CE1 C Y N 383 TYR CE2 C Y N 384 TYR CZ C Y N 385 TYR OH O N N 386 TYR OXT O N N 387 TYR H H N N 388 TYR H2 H N N 389 TYR HA H N N 390 TYR HB2 H N N 391 TYR HB3 H N N 392 TYR HD1 H N N 393 TYR HD2 H N N 394 TYR HE1 H N N 395 TYR HE2 H N N 396 TYR HH H N N 397 TYR HXT H N N 398 VAL N N N N 399 VAL CA C N S 400 VAL C C N N 401 VAL O O N N 402 VAL CB C N N 403 VAL CG1 C N N 404 VAL CG2 C N N 405 VAL OXT O N N 406 VAL H H N N 407 VAL H2 H N N 408 VAL HA H N N 409 VAL HB H N N 410 VAL HG11 H N N 411 VAL HG12 H N N 412 VAL HG13 H N N 413 VAL HG21 H N N 414 VAL HG22 H N N 415 VAL HG23 H N N 416 VAL HXT H N N 417 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACT C O doub N N 1 ACT C OXT sing N N 2 ACT C CH3 sing N N 3 ACT CH3 H1 sing N N 4 ACT CH3 H2 sing N N 5 ACT CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 CYS N CA sing N N 76 CYS N H sing N N 77 CYS N H2 sing N N 78 CYS CA C sing N N 79 CYS CA CB sing N N 80 CYS CA HA sing N N 81 CYS C O doub N N 82 CYS C OXT sing N N 83 CYS CB SG sing N N 84 CYS CB HB2 sing N N 85 CYS CB HB3 sing N N 86 CYS SG HG sing N N 87 CYS OXT HXT sing N N 88 GLN N CA sing N N 89 GLN N H sing N N 90 GLN N H2 sing N N 91 GLN CA C sing N N 92 GLN CA CB sing N N 93 GLN CA HA sing N N 94 GLN C O doub N N 95 GLN C OXT sing N N 96 GLN CB CG sing N N 97 GLN CB HB2 sing N N 98 GLN CB HB3 sing N N 99 GLN CG CD sing N N 100 GLN CG HG2 sing N N 101 GLN CG HG3 sing N N 102 GLN CD OE1 doub N N 103 GLN CD NE2 sing N N 104 GLN NE2 HE21 sing N N 105 GLN NE2 HE22 sing N N 106 GLN OXT HXT sing N N 107 GLU N CA sing N N 108 GLU N H sing N N 109 GLU N H2 sing N N 110 GLU CA C sing N N 111 GLU CA CB sing N N 112 GLU CA HA sing N N 113 GLU C O doub N N 114 GLU C OXT sing N N 115 GLU CB CG sing N N 116 GLU CB HB2 sing N N 117 GLU CB HB3 sing N N 118 GLU CG CD sing N N 119 GLU CG HG2 sing N N 120 GLU CG HG3 sing N N 121 GLU CD OE1 doub N N 122 GLU CD OE2 sing N N 123 GLU OE2 HE2 sing N N 124 GLU OXT HXT sing N N 125 GLY N CA sing N N 126 GLY N H sing N N 127 GLY N H2 sing N N 128 GLY CA C sing N N 129 GLY CA HA2 sing N N 130 GLY CA HA3 sing N N 131 GLY C O doub N N 132 GLY C OXT sing N N 133 GLY OXT HXT sing N N 134 HIS N CA sing N N 135 HIS N H sing N N 136 HIS N H2 sing N N 137 HIS CA C sing N N 138 HIS CA CB sing N N 139 HIS CA HA sing N N 140 HIS C O doub N N 141 HIS C OXT sing N N 142 HIS CB CG sing N N 143 HIS CB HB2 sing N N 144 HIS CB HB3 sing N N 145 HIS CG ND1 sing Y N 146 HIS CG CD2 doub Y N 147 HIS ND1 CE1 doub Y N 148 HIS ND1 HD1 sing N N 149 HIS CD2 NE2 sing Y N 150 HIS CD2 HD2 sing N N 151 HIS CE1 NE2 sing Y N 152 HIS CE1 HE1 sing N N 153 HIS NE2 HE2 sing N N 154 HIS OXT HXT sing N N 155 HOH O H1 sing N N 156 HOH O H2 sing N N 157 ILE N CA sing N N 158 ILE N H sing N N 159 ILE N H2 sing N N 160 ILE CA C sing N N 161 ILE CA CB sing N N 162 ILE CA HA sing N N 163 ILE C O doub N N 164 ILE C OXT sing N N 165 ILE CB CG1 sing N N 166 ILE CB CG2 sing N N 167 ILE CB HB sing N N 168 ILE CG1 CD1 sing N N 169 ILE CG1 HG12 sing N N 170 ILE CG1 HG13 sing N N 171 ILE CG2 HG21 sing N N 172 ILE CG2 HG22 sing N N 173 ILE CG2 HG23 sing N N 174 ILE CD1 HD11 sing N N 175 ILE CD1 HD12 sing N N 176 ILE CD1 HD13 sing N N 177 ILE OXT HXT sing N N 178 LEU N CA sing N N 179 LEU N H sing N N 180 LEU N H2 sing N N 181 LEU CA C sing N N 182 LEU CA CB sing N N 183 LEU CA HA sing N N 184 LEU C O doub N N 185 LEU C OXT sing N N 186 LEU CB CG sing N N 187 LEU CB HB2 sing N N 188 LEU CB HB3 sing N N 189 LEU CG CD1 sing N N 190 LEU CG CD2 sing N N 191 LEU CG HG sing N N 192 LEU CD1 HD11 sing N N 193 LEU CD1 HD12 sing N N 194 LEU CD1 HD13 sing N N 195 LEU CD2 HD21 sing N N 196 LEU CD2 HD22 sing N N 197 LEU CD2 HD23 sing N N 198 LEU OXT HXT sing N N 199 LYS N CA sing N N 200 LYS N H sing N N 201 LYS N H2 sing N N 202 LYS CA C sing N N 203 LYS CA CB sing N N 204 LYS CA HA sing N N 205 LYS C O doub N N 206 LYS C OXT sing N N 207 LYS CB CG sing N N 208 LYS CB HB2 sing N N 209 LYS CB HB3 sing N N 210 LYS CG CD sing N N 211 LYS CG HG2 sing N N 212 LYS CG HG3 sing N N 213 LYS CD CE sing N N 214 LYS CD HD2 sing N N 215 LYS CD HD3 sing N N 216 LYS CE NZ sing N N 217 LYS CE HE2 sing N N 218 LYS CE HE3 sing N N 219 LYS NZ HZ1 sing N N 220 LYS NZ HZ2 sing N N 221 LYS NZ HZ3 sing N N 222 LYS OXT HXT sing N N 223 MET N CA sing N N 224 MET N H sing N N 225 MET N H2 sing N N 226 MET CA C sing N N 227 MET CA CB sing N N 228 MET CA HA sing N N 229 MET C O doub N N 230 MET C OXT sing N N 231 MET CB CG sing N N 232 MET CB HB2 sing N N 233 MET CB HB3 sing N N 234 MET CG SD sing N N 235 MET CG HG2 sing N N 236 MET CG HG3 sing N N 237 MET SD CE sing N N 238 MET CE HE1 sing N N 239 MET CE HE2 sing N N 240 MET CE HE3 sing N N 241 MET OXT HXT sing N N 242 MSE N CA sing N N 243 MSE N H sing N N 244 MSE N H2 sing N N 245 MSE CA C sing N N 246 MSE CA CB sing N N 247 MSE CA HA sing N N 248 MSE C O doub N N 249 MSE C OXT sing N N 250 MSE OXT HXT sing N N 251 MSE CB CG sing N N 252 MSE CB HB2 sing N N 253 MSE CB HB3 sing N N 254 MSE CG SE sing N N 255 MSE CG HG2 sing N N 256 MSE CG HG3 sing N N 257 MSE SE CE sing N N 258 MSE CE HE1 sing N N 259 MSE CE HE2 sing N N 260 MSE CE HE3 sing N N 261 PHE N CA sing N N 262 PHE N H sing N N 263 PHE N H2 sing N N 264 PHE CA C sing N N 265 PHE CA CB sing N N 266 PHE CA HA sing N N 267 PHE C O doub N N 268 PHE C OXT sing N N 269 PHE CB CG sing N N 270 PHE CB HB2 sing N N 271 PHE CB HB3 sing N N 272 PHE CG CD1 doub Y N 273 PHE CG CD2 sing Y N 274 PHE CD1 CE1 sing Y N 275 PHE CD1 HD1 sing N N 276 PHE CD2 CE2 doub Y N 277 PHE CD2 HD2 sing N N 278 PHE CE1 CZ doub Y N 279 PHE CE1 HE1 sing N N 280 PHE CE2 CZ sing Y N 281 PHE CE2 HE2 sing N N 282 PHE CZ HZ sing N N 283 PHE OXT HXT sing N N 284 PRO N CA sing N N 285 PRO N CD sing N N 286 PRO N H sing N N 287 PRO CA C sing N N 288 PRO CA CB sing N N 289 PRO CA HA sing N N 290 PRO C O doub N N 291 PRO C OXT sing N N 292 PRO CB CG sing N N 293 PRO CB HB2 sing N N 294 PRO CB HB3 sing N N 295 PRO CG CD sing N N 296 PRO CG HG2 sing N N 297 PRO CG HG3 sing N N 298 PRO CD HD2 sing N N 299 PRO CD HD3 sing N N 300 PRO OXT HXT sing N N 301 SER N CA sing N N 302 SER N H sing N N 303 SER N H2 sing N N 304 SER CA C sing N N 305 SER CA CB sing N N 306 SER CA HA sing N N 307 SER C O doub N N 308 SER C OXT sing N N 309 SER CB OG sing N N 310 SER CB HB2 sing N N 311 SER CB HB3 sing N N 312 SER OG HG sing N N 313 SER OXT HXT sing N N 314 THR N CA sing N N 315 THR N H sing N N 316 THR N H2 sing N N 317 THR CA C sing N N 318 THR CA CB sing N N 319 THR CA HA sing N N 320 THR C O doub N N 321 THR C OXT sing N N 322 THR CB OG1 sing N N 323 THR CB CG2 sing N N 324 THR CB HB sing N N 325 THR OG1 HG1 sing N N 326 THR CG2 HG21 sing N N 327 THR CG2 HG22 sing N N 328 THR CG2 HG23 sing N N 329 THR OXT HXT sing N N 330 TRP N CA sing N N 331 TRP N H sing N N 332 TRP N H2 sing N N 333 TRP CA C sing N N 334 TRP CA CB sing N N 335 TRP CA HA sing N N 336 TRP C O doub N N 337 TRP C OXT sing N N 338 TRP CB CG sing N N 339 TRP CB HB2 sing N N 340 TRP CB HB3 sing N N 341 TRP CG CD1 doub Y N 342 TRP CG CD2 sing Y N 343 TRP CD1 NE1 sing Y N 344 TRP CD1 HD1 sing N N 345 TRP CD2 CE2 doub Y N 346 TRP CD2 CE3 sing Y N 347 TRP NE1 CE2 sing Y N 348 TRP NE1 HE1 sing N N 349 TRP CE2 CZ2 sing Y N 350 TRP CE3 CZ3 doub Y N 351 TRP CE3 HE3 sing N N 352 TRP CZ2 CH2 doub Y N 353 TRP CZ2 HZ2 sing N N 354 TRP CZ3 CH2 sing Y N 355 TRP CZ3 HZ3 sing N N 356 TRP CH2 HH2 sing N N 357 TRP OXT HXT sing N N 358 TYR N CA sing N N 359 TYR N H sing N N 360 TYR N H2 sing N N 361 TYR CA C sing N N 362 TYR CA CB sing N N 363 TYR CA HA sing N N 364 TYR C O doub N N 365 TYR C OXT sing N N 366 TYR CB CG sing N N 367 TYR CB HB2 sing N N 368 TYR CB HB3 sing N N 369 TYR CG CD1 doub Y N 370 TYR CG CD2 sing Y N 371 TYR CD1 CE1 sing Y N 372 TYR CD1 HD1 sing N N 373 TYR CD2 CE2 doub Y N 374 TYR CD2 HD2 sing N N 375 TYR CE1 CZ doub Y N 376 TYR CE1 HE1 sing N N 377 TYR CE2 CZ sing Y N 378 TYR CE2 HE2 sing N N 379 TYR CZ OH sing N N 380 TYR OH HH sing N N 381 TYR OXT HXT sing N N 382 VAL N CA sing N N 383 VAL N H sing N N 384 VAL N H2 sing N N 385 VAL CA C sing N N 386 VAL CA CB sing N N 387 VAL CA HA sing N N 388 VAL C O doub N N 389 VAL C OXT sing N N 390 VAL CB CG1 sing N N 391 VAL CB CG2 sing N N 392 VAL CB HB sing N N 393 VAL CG1 HG11 sing N N 394 VAL CG1 HG12 sing N N 395 VAL CG1 HG13 sing N N 396 VAL CG2 HG21 sing N N 397 VAL CG2 HG22 sing N N 398 VAL CG2 HG23 sing N N 399 VAL OXT HXT sing N N 400 # _atom_sites.entry_id 1VI3 _atom_sites.fract_transf_matrix[1][1] 0.011707 _atom_sites.fract_transf_matrix[1][2] 0.006759 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013518 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013653 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_