HEADER HYDROLASE 01-DEC-03 1VIX TITLE CRYSTAL STRUCTURE OF A PUTATIVE PEPTIDASE T COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDASE T; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TRIPEPTIDE AMINOPEPTIDASE, AMINOTRIPEPTIDASE, TRIPEPTIDASE; COMPND 5 EC: 3.4.11.14; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: PEPT, B1127; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRUCTURAL GENOMICS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR STRUCTURAL GENOMIX REVDAT 5 27-DEC-23 1VIX 1 REMARK LINK REVDAT 4 04-OCT-17 1VIX 1 REMARK REVDAT 3 24-FEB-09 1VIX 1 VERSN REVDAT 2 30-AUG-05 1VIX 1 JRNL REVDAT 1 30-DEC-03 1VIX 0 JRNL AUTH J.BADGER,J.M.SAUDER,J.M.ADAMS,S.ANTONYSAMY,K.BAIN, JRNL AUTH 2 M.G.BERGSEID,S.G.BUCHANAN,M.D.BUCHANAN,Y.BATIYENKO, JRNL AUTH 3 J.A.CHRISTOPHER,S.EMTAGE,A.EROSHKINA,I.FEIL,E.B.FURLONG, JRNL AUTH 4 K.S.GAJIWALA,X.GAO,D.HE,J.HENDLE,A.HUBER,K.HODA,P.KEARINS, JRNL AUTH 5 C.KISSINGER,B.LAUBERT,H.A.LEWIS,J.LIN,K.LOOMIS,D.LORIMER, JRNL AUTH 6 G.LOUIE,M.MALETIC,C.D.MARSH,I.MILLER,J.MOLINARI, JRNL AUTH 7 H.J.MULLER-DIECKMANN,J.M.NEWMAN,B.W.NOLAND,B.PAGARIGAN, JRNL AUTH 8 F.PARK,T.S.PEAT,K.W.POST,S.RADOJICIC,A.RAMOS,R.ROMERO, JRNL AUTH 9 M.E.RUTTER,W.E.SANDERSON,K.D.SCHWINN,J.TRESSER,J.WINHOVEN, JRNL AUTH10 T.A.WRIGHT,L.WU,J.XU,T.J.HARRIS JRNL TITL STRUCTURAL ANALYSIS OF A SET OF PROTEINS RESULTING FROM A JRNL TITL 2 BACTERIAL GENOMICS PROJECT JRNL REF PROTEINS V. 60 787 2005 JRNL REFN ISSN 0887-3585 JRNL PMID 16021622 JRNL DOI 10.1002/PROT.20541 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 4.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 34894 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.256 REMARK 3 FREE R VALUE : 0.303 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1773 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6313 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 121 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.07600 REMARK 3 B22 (A**2) : -1.08600 REMARK 3 B33 (A**2) : 0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.007 ; NULL REMARK 3 ANGLE DISTANCE (A) : 1.042 ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : 0.003 ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : 0.068 ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : 5.380 ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 0.579 ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.080 ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : 1.079 ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : 1.886 ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1VIX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-DEC-03. REMARK 100 THE DEPOSITION ID IS D_1000001908. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 32-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM, TRUNCATE REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA, TRUNCATE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34894 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 32.690 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 77.0 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 62.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.61400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 57.63500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.56050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 72.89350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 38.56050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 57.63500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 72.89350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 410 REMARK 465 GLY A 411 REMARK 465 SER A 412 REMARK 465 HIS A 413 REMARK 465 HIS A 414 REMARK 465 HIS A 415 REMARK 465 HIS A 416 REMARK 465 HIS A 417 REMARK 465 HIS A 418 REMARK 465 GLU B 409 REMARK 465 GLY B 410 REMARK 465 GLY B 411 REMARK 465 SER B 412 REMARK 465 HIS B 413 REMARK 465 HIS B 414 REMARK 465 HIS B 415 REMARK 465 HIS B 416 REMARK 465 HIS B 417 REMARK 465 HIS B 418 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 157 CG CD OE1 NE2 REMARK 470 LYS A 159 CG CD CE NZ REMARK 470 LYS A 303 CD CE NZ REMARK 470 LYS A 408 CG CD CE NZ REMARK 470 GLU A 409 CG CD OE1 OE2 REMARK 470 ARG B 23 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 408 CB CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN A 31 O PRO A 171 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 15 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP A 109 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 132 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP A 283 CB - CG - OD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP B 15 CB - CG - OD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 ASP B 102 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 0 94.80 64.41 REMARK 500 ASN A 89 54.09 38.14 REMARK 500 ASN A 91 76.51 -117.52 REMARK 500 ASN A 97 65.64 37.54 REMARK 500 ASP A 196 23.86 -151.42 REMARK 500 PRO A 307 -19.21 -46.15 REMARK 500 CYS A 368 74.99 -154.92 REMARK 500 HIS A 379 49.84 71.79 REMARK 500 ARG A 407 52.45 -95.29 REMARK 500 LYS A 408 96.24 -68.37 REMARK 500 LYS B 159 58.61 32.77 REMARK 500 ASP B 196 27.68 -145.47 REMARK 500 VAL B 230 -50.93 -139.14 REMARK 500 PRO B 246 100.13 -46.47 REMARK 500 PRO B 307 -33.14 -33.62 REMARK 500 PRO B 330 -37.13 -37.04 REMARK 500 CYS B 368 87.60 -151.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 419 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 78 NE2 REMARK 620 2 ASP A 140 OD2 93.6 REMARK 620 3 ASP A 196 OD1 105.1 89.2 REMARK 620 4 ASP A 196 OD2 100.4 148.5 60.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 420 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 140 OD1 REMARK 620 2 GLU A 174 OE1 121.0 REMARK 620 3 HIS A 379 NE2 82.0 88.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 419 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 78 NE2 REMARK 620 2 ASP B 140 OD1 136.8 REMARK 620 3 ASP B 140 OD2 122.8 49.3 REMARK 620 4 ASP B 196 OD1 99.1 66.7 115.8 REMARK 620 5 ASP B 196 OD2 82.1 114.8 155.1 55.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 420 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 140 OD2 REMARK 620 2 HIS B 379 NE2 110.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 419 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 420 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 419 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 420 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 421 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 422 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 423 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 421 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 422 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 424 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 423 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 424 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 425 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 425 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 426 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 426 DBREF 1VIX A 2 408 UNP P29745 PEPT_ECOLI 2 408 DBREF 1VIX B 2 408 UNP P29745 PEPT_ECOLI 2 408 SEQADV 1VIX MET A -1 UNP P29745 CLONING ARTIFACT SEQADV 1VIX SER A 0 UNP P29745 CLONING ARTIFACT SEQADV 1VIX LEU A 1 UNP P29745 CLONING ARTIFACT SEQADV 1VIX GLU A 409 UNP P29745 CLONING ARTIFACT SEQADV 1VIX GLY A 410 UNP P29745 CLONING ARTIFACT SEQADV 1VIX GLY A 411 UNP P29745 CLONING ARTIFACT SEQADV 1VIX SER A 412 UNP P29745 CLONING ARTIFACT SEQADV 1VIX HIS A 413 UNP P29745 CLONING ARTIFACT SEQADV 1VIX HIS A 414 UNP P29745 CLONING ARTIFACT SEQADV 1VIX HIS A 415 UNP P29745 CLONING ARTIFACT SEQADV 1VIX HIS A 416 UNP P29745 CLONING ARTIFACT SEQADV 1VIX HIS A 417 UNP P29745 CLONING ARTIFACT SEQADV 1VIX HIS A 418 UNP P29745 CLONING ARTIFACT SEQADV 1VIX MET B -1 UNP P29745 CLONING ARTIFACT SEQADV 1VIX SER B 0 UNP P29745 CLONING ARTIFACT SEQADV 1VIX LEU B 1 UNP P29745 CLONING ARTIFACT SEQADV 1VIX GLU B 409 UNP P29745 CLONING ARTIFACT SEQADV 1VIX GLY B 410 UNP P29745 CLONING ARTIFACT SEQADV 1VIX GLY B 411 UNP P29745 CLONING ARTIFACT SEQADV 1VIX SER B 412 UNP P29745 CLONING ARTIFACT SEQADV 1VIX HIS B 413 UNP P29745 CLONING ARTIFACT SEQADV 1VIX HIS B 414 UNP P29745 CLONING ARTIFACT SEQADV 1VIX HIS B 415 UNP P29745 CLONING ARTIFACT SEQADV 1VIX HIS B 416 UNP P29745 CLONING ARTIFACT SEQADV 1VIX HIS B 417 UNP P29745 CLONING ARTIFACT SEQADV 1VIX HIS B 418 UNP P29745 CLONING ARTIFACT SEQRES 1 A 420 MET SER LEU ASP LYS LEU LEU GLU ARG PHE LEU ASN TYR SEQRES 2 A 420 VAL SER LEU ASP THR GLN SER LYS ALA GLY VAL ARG GLN SEQRES 3 A 420 VAL PRO SER THR GLU GLY GLN TRP LYS LEU LEU HIS LEU SEQRES 4 A 420 LEU LYS GLU GLN LEU GLU GLU MET GLY LEU ILE ASN VAL SEQRES 5 A 420 THR LEU SER GLU LYS GLY THR LEU MET ALA THR LEU PRO SEQRES 6 A 420 ALA ASN VAL PRO GLY ASP ILE PRO ALA ILE GLY PHE ILE SEQRES 7 A 420 SER HIS VAL ASP THR SER PRO ASP CYS SER GLY LYS ASN SEQRES 8 A 420 VAL ASN PRO GLN ILE VAL GLU ASN TYR ARG GLY GLY ASP SEQRES 9 A 420 ILE ALA LEU GLY ILE GLY ASP GLU VAL LEU SER PRO VAL SEQRES 10 A 420 MET PHE PRO VAL LEU HIS GLN LEU LEU GLY GLN THR LEU SEQRES 11 A 420 ILE THR THR ASP GLY LYS THR LEU LEU GLY ALA ASP ASP SEQRES 12 A 420 LYS ALA GLY ILE ALA GLU ILE MET THR ALA LEU ALA VAL SEQRES 13 A 420 LEU GLN GLN LYS LYS ILE PRO HIS GLY ASP ILE ARG VAL SEQRES 14 A 420 ALA PHE THR PRO ASP GLU GLU VAL GLY LYS GLY ALA LYS SEQRES 15 A 420 HIS PHE ASP VAL ASP ALA PHE ASP ALA ARG TRP ALA TYR SEQRES 16 A 420 THR VAL ASP GLY GLY GLY VAL GLY GLU LEU GLU PHE GLU SEQRES 17 A 420 ASN PHE ASN ALA ALA SER VAL ASN ILE LYS ILE VAL GLY SEQRES 18 A 420 ASN ASN VAL HIS PRO GLY THR ALA LYS GLY VAL MET VAL SEQRES 19 A 420 ASN ALA LEU SER LEU ALA ALA ARG ILE HIS ALA GLU VAL SEQRES 20 A 420 PRO ALA ASP GLU SER PRO GLU MET THR GLU GLY TYR GLU SEQRES 21 A 420 GLY PHE TYR HIS LEU ALA SER MET LYS GLY THR VAL GLU SEQRES 22 A 420 ARG ALA ASP MET HIS TYR ILE ILE ARG ASP PHE ASP ARG SEQRES 23 A 420 LYS GLN PHE GLU ALA ARG LYS ARG LYS MET MET GLU ILE SEQRES 24 A 420 ALA LYS LYS VAL GLY LYS GLY LEU HIS PRO ASP CYS TYR SEQRES 25 A 420 ILE GLU LEU VAL ILE GLU ASP SER TYR TYR ASN MET ARG SEQRES 26 A 420 GLU LYS VAL VAL GLU HIS PRO HIS ILE LEU ASP ILE ALA SEQRES 27 A 420 GLN GLN ALA MET ARG ASP CYS ASP ILE GLU PRO GLU LEU SEQRES 28 A 420 LYS PRO ILE ARG GLY GLY THR ASP GLY ALA GLN LEU SER SEQRES 29 A 420 PHE MET GLY LEU PRO CYS PRO ASN LEU PHE THR GLY GLY SEQRES 30 A 420 TYR ASN TYR HIS GLY LYS HIS GLU PHE VAL THR LEU GLU SEQRES 31 A 420 GLY MET GLU LYS ALA VAL GLN VAL ILE VAL ARG ILE ALA SEQRES 32 A 420 GLU LEU THR ALA GLN ARG LYS GLU GLY GLY SER HIS HIS SEQRES 33 A 420 HIS HIS HIS HIS SEQRES 1 B 420 MET SER LEU ASP LYS LEU LEU GLU ARG PHE LEU ASN TYR SEQRES 2 B 420 VAL SER LEU ASP THR GLN SER LYS ALA GLY VAL ARG GLN SEQRES 3 B 420 VAL PRO SER THR GLU GLY GLN TRP LYS LEU LEU HIS LEU SEQRES 4 B 420 LEU LYS GLU GLN LEU GLU GLU MET GLY LEU ILE ASN VAL SEQRES 5 B 420 THR LEU SER GLU LYS GLY THR LEU MET ALA THR LEU PRO SEQRES 6 B 420 ALA ASN VAL PRO GLY ASP ILE PRO ALA ILE GLY PHE ILE SEQRES 7 B 420 SER HIS VAL ASP THR SER PRO ASP CYS SER GLY LYS ASN SEQRES 8 B 420 VAL ASN PRO GLN ILE VAL GLU ASN TYR ARG GLY GLY ASP SEQRES 9 B 420 ILE ALA LEU GLY ILE GLY ASP GLU VAL LEU SER PRO VAL SEQRES 10 B 420 MET PHE PRO VAL LEU HIS GLN LEU LEU GLY GLN THR LEU SEQRES 11 B 420 ILE THR THR ASP GLY LYS THR LEU LEU GLY ALA ASP ASP SEQRES 12 B 420 LYS ALA GLY ILE ALA GLU ILE MET THR ALA LEU ALA VAL SEQRES 13 B 420 LEU GLN GLN LYS LYS ILE PRO HIS GLY ASP ILE ARG VAL SEQRES 14 B 420 ALA PHE THR PRO ASP GLU GLU VAL GLY LYS GLY ALA LYS SEQRES 15 B 420 HIS PHE ASP VAL ASP ALA PHE ASP ALA ARG TRP ALA TYR SEQRES 16 B 420 THR VAL ASP GLY GLY GLY VAL GLY GLU LEU GLU PHE GLU SEQRES 17 B 420 ASN PHE ASN ALA ALA SER VAL ASN ILE LYS ILE VAL GLY SEQRES 18 B 420 ASN ASN VAL HIS PRO GLY THR ALA LYS GLY VAL MET VAL SEQRES 19 B 420 ASN ALA LEU SER LEU ALA ALA ARG ILE HIS ALA GLU VAL SEQRES 20 B 420 PRO ALA ASP GLU SER PRO GLU MET THR GLU GLY TYR GLU SEQRES 21 B 420 GLY PHE TYR HIS LEU ALA SER MET LYS GLY THR VAL GLU SEQRES 22 B 420 ARG ALA ASP MET HIS TYR ILE ILE ARG ASP PHE ASP ARG SEQRES 23 B 420 LYS GLN PHE GLU ALA ARG LYS ARG LYS MET MET GLU ILE SEQRES 24 B 420 ALA LYS LYS VAL GLY LYS GLY LEU HIS PRO ASP CYS TYR SEQRES 25 B 420 ILE GLU LEU VAL ILE GLU ASP SER TYR TYR ASN MET ARG SEQRES 26 B 420 GLU LYS VAL VAL GLU HIS PRO HIS ILE LEU ASP ILE ALA SEQRES 27 B 420 GLN GLN ALA MET ARG ASP CYS ASP ILE GLU PRO GLU LEU SEQRES 28 B 420 LYS PRO ILE ARG GLY GLY THR ASP GLY ALA GLN LEU SER SEQRES 29 B 420 PHE MET GLY LEU PRO CYS PRO ASN LEU PHE THR GLY GLY SEQRES 30 B 420 TYR ASN TYR HIS GLY LYS HIS GLU PHE VAL THR LEU GLU SEQRES 31 B 420 GLY MET GLU LYS ALA VAL GLN VAL ILE VAL ARG ILE ALA SEQRES 32 B 420 GLU LEU THR ALA GLN ARG LYS GLU GLY GLY SER HIS HIS SEQRES 33 B 420 HIS HIS HIS HIS HET ZN A 419 1 HET ZN A 420 1 HET SO4 A 421 5 HET SO4 A 422 5 HET SO4 A 423 5 HET SO4 A 424 5 HET SO4 A 425 5 HET SO4 A 426 5 HET ZN B 419 1 HET ZN B 420 1 HET SO4 B 421 5 HET SO4 B 422 5 HET SO4 B 423 5 HET SO4 B 424 5 HET SO4 B 425 5 HET SO4 B 426 5 HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION FORMUL 3 ZN 4(ZN 2+) FORMUL 5 SO4 12(O4 S 2-) FORMUL 19 HOH *121(H2 O) HELIX 1 1 SER A 0 LEU A 14 1 15 HELIX 2 2 GLU A 29 GLU A 44 1 16 HELIX 3 3 PHE A 117 LEU A 123 5 7 HELIX 4 4 GLY A 138 LYS A 158 1 21 HELIX 5 5 ASP A 172 GLY A 176 5 5 HELIX 6 6 ASP A 183 ASP A 188 1 6 HELIX 7 7 HIS A 223 ALA A 227 5 5 HELIX 8 8 ASN A 233 VAL A 245 1 13 HELIX 9 9 ASP A 283 LYS A 303 1 21 HELIX 10 10 MET A 322 GLU A 328 1 7 HELIX 11 11 PRO A 330 CYS A 343 1 14 HELIX 12 12 THR A 356 SER A 362 1 7 HELIX 13 13 LEU A 387 ARG A 407 1 21 HELIX 14 14 SER B 0 SER B 13 1 14 HELIX 15 15 GLU B 29 GLY B 46 1 18 HELIX 16 16 PHE B 117 LEU B 123 5 7 HELIX 17 17 GLY B 138 LYS B 158 1 21 HELIX 18 18 ASP B 172 GLY B 176 5 5 HELIX 19 19 ASP B 183 ASP B 188 1 6 HELIX 20 20 HIS B 223 ALA B 227 5 5 HELIX 21 21 ASN B 233 VAL B 245 1 13 HELIX 22 22 SER B 250 THR B 254 5 5 HELIX 23 23 ASP B 283 LYS B 303 1 21 HELIX 24 24 MET B 322 GLU B 328 1 7 HELIX 25 25 PRO B 330 CYS B 343 1 14 HELIX 26 26 THR B 356 PHE B 363 1 8 HELIX 27 27 LEU B 387 ARG B 407 1 21 SHEET 1 A 8 ILE A 48 LEU A 52 0 SHEET 2 A 8 LEU A 58 LEU A 62 -1 O THR A 61 N ILE A 48 SHEET 3 A 8 ILE A 165 THR A 170 -1 O ILE A 165 N LEU A 62 SHEET 4 A 8 ILE A 73 HIS A 78 1 N ILE A 73 O ARG A 166 SHEET 5 A 8 TRP A 191 VAL A 195 1 O VAL A 195 N ILE A 76 SHEET 6 A 8 ASN A 370 LEU A 371 1 O LEU A 371 N THR A 194 SHEET 7 A 8 GLU A 202 GLU A 204 -1 N GLU A 204 O ASN A 370 SHEET 8 A 8 GLU A 348 LEU A 349 1 O GLU A 348 N LEU A 203 SHEET 1 B 4 GLN A 93 VAL A 95 0 SHEET 2 B 4 LEU A 128 THR A 130 -1 O LEU A 128 N VAL A 95 SHEET 3 B 4 PHE A 384 THR A 386 -1 O VAL A 385 N ILE A 129 SHEET 4 B 4 GLY A 375 TYR A 376 -1 N TYR A 376 O PHE A 384 SHEET 1 C 2 ILE A 103 LEU A 105 0 SHEET 2 C 2 GLU A 110 LEU A 112 -1 O LEU A 112 N ILE A 103 SHEET 1 D 8 TYR A 310 TYR A 319 0 SHEET 2 D 8 ASN A 209 VAL A 218 -1 N ALA A 210 O SER A 318 SHEET 3 D 8 ARG A 272 ASP A 281 -1 O ILE A 279 N ALA A 211 SHEET 4 D 8 PHE A 260 THR A 269 -1 N SER A 265 O HIS A 276 SHEET 5 D 8 PHE B 260 THR B 269 -1 O MET B 266 N GLY A 268 SHEET 6 D 8 ARG B 272 ASP B 281 -1 O ASP B 274 N LYS B 267 SHEET 7 D 8 ASN B 209 VAL B 218 -1 N ILE B 217 O ALA B 273 SHEET 8 D 8 TYR B 310 TYR B 319 -1 O TYR B 319 N ALA B 210 SHEET 1 E 8 ILE B 48 LEU B 52 0 SHEET 2 E 8 LEU B 58 LEU B 62 -1 O THR B 61 N ILE B 48 SHEET 3 E 8 ILE B 165 THR B 170 -1 O VAL B 167 N ALA B 60 SHEET 4 E 8 ILE B 73 HIS B 78 1 N ILE B 73 O ARG B 166 SHEET 5 E 8 TRP B 191 VAL B 195 1 O TYR B 193 N ILE B 76 SHEET 6 E 8 ASN B 370 LEU B 371 1 O LEU B 371 N THR B 194 SHEET 7 E 8 GLU B 202 GLU B 204 -1 N GLU B 204 O ASN B 370 SHEET 8 E 8 GLU B 348 LEU B 349 1 O GLU B 348 N LEU B 203 SHEET 1 F 4 GLN B 93 VAL B 95 0 SHEET 2 F 4 LEU B 128 THR B 130 -1 O LEU B 128 N VAL B 95 SHEET 3 F 4 PHE B 384 THR B 386 -1 O VAL B 385 N ILE B 129 SHEET 4 F 4 GLY B 375 TYR B 376 -1 N TYR B 376 O PHE B 384 SHEET 1 G 2 ILE B 103 ALA B 104 0 SHEET 2 G 2 VAL B 111 LEU B 112 -1 O LEU B 112 N ILE B 103 LINK NE2 HIS A 78 ZN ZN A 419 1555 1555 2.06 LINK OD2 ASP A 140 ZN ZN A 419 1555 1555 2.06 LINK OD1 ASP A 140 ZN ZN A 420 1555 1555 2.16 LINK OE1 GLU A 174 ZN ZN A 420 1555 1555 2.04 LINK OD1 ASP A 196 ZN ZN A 419 1555 1555 2.08 LINK OD2 ASP A 196 ZN ZN A 419 1555 1555 2.18 LINK NE2 HIS A 379 ZN ZN A 420 1555 1555 2.52 LINK NE2 HIS B 78 ZN ZN B 419 1555 1555 2.15 LINK OD1 ASP B 140 ZN ZN B 419 1555 1555 2.59 LINK OD2 ASP B 140 ZN ZN B 419 1555 1555 2.61 LINK OD2 ASP B 140 ZN ZN B 420 1555 1555 1.98 LINK OD1 ASP B 196 ZN ZN B 419 1555 1555 2.23 LINK OD2 ASP B 196 ZN ZN B 419 1555 1555 2.41 LINK NE2 HIS B 379 ZN ZN B 420 1555 1555 2.54 CISPEP 1 VAL A 25 PRO A 26 0 -1.05 CISPEP 2 ASP A 140 ASP A 141 0 4.30 CISPEP 3 VAL B 25 PRO B 26 0 -4.43 CISPEP 4 ASP B 140 ASP B 141 0 -0.92 SITE 1 AC1 6 HIS A 78 ASP A 140 GLU A 173 GLU A 174 SITE 2 AC1 6 ASP A 196 ZN A 420 SITE 1 AC2 4 ASP A 140 GLU A 174 HIS A 379 ZN A 419 SITE 1 AC3 5 HIS B 78 ASP B 140 GLU B 173 ASP B 196 SITE 2 AC3 5 ZN B 420 SITE 1 AC4 4 ASP B 140 GLU B 174 HIS B 379 ZN B 419 SITE 1 AC5 5 HIS A 306 PRO A 307 PRO A 330 HIS A 331 SITE 2 AC5 5 ARG A 407 SITE 1 AC6 3 GLY A 380 LYS A 381 HIS A 382 SITE 1 AC7 2 LYS A 216 ARG A 272 SITE 1 AC8 5 LYS A 88 SO4 A 424 HOH A 435 LYS B 88 SITE 2 AC8 5 SO4 B 425 SITE 1 AC9 2 LYS B 216 ARG B 272 SITE 1 BC1 4 LYS A 88 SO4 A 425 LYS B 88 SO4 B 421 SITE 1 BC2 4 HIS A 223 ARG B 280 TYR B 319 GLY B 354 SITE 1 BC3 3 PRO B 330 HIS B 331 ARG B 407 SITE 1 BC4 5 ASP A 15 GLN A 17 LYS A 88 HOH A 471 SITE 2 BC4 5 SO4 B 421 SITE 1 BC5 3 SO4 A 424 ASP B 15 HOH B 433 SITE 1 BC6 3 GLU A 29 TRP A 32 HIS A 36 SITE 1 BC7 2 TRP B 32 HIS B 36 CRYST1 115.270 145.787 77.121 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008675 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006859 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012967 0.00000