data_1VJF # _entry.id 1VJF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1VJF pdb_00001vjf 10.2210/pdb1vjf/pdb RCSB RCSB001916 ? ? WWPDB D_1000001916 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 355823 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 1VJF _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2004-02-11 _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of putative DNA-binding protein from Caulobacter crescentus at 1.62 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.length_a 50.891 _cell.length_b 50.891 _cell.length_c 121.430 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.entry_id 1VJF _cell.pdbx_unique_axis ? _cell.Z_PDB 8 # _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.entry_id 1VJF _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 96 _symmetry.cell_setting ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA-binding protein, putative' 20031.133 1 ? ? ? ? 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 4 water nat water 18.015 172 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MGSDKIHHHHHH(MSE)KTRADLFAFFDAHGVDHKTLDHPPVFRVEEGLEIKAA(MSE)PGGHTKNLFLKDAKGQLWLIS ALGETTIDLKKLHHVIGSGRLSFGPQE(MSE)(MSE)LETLGVTPGSVTAFGLINDTEKRVRFVLDKALADSDPVNFHPL KNDATTAVSQAGLRRFLAALGVEP(MSE)IVDFAA(MSE)EVVG ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSDKIHHHHHHMKTRADLFAFFDAHGVDHKTLDHPPVFRVEEGLEIKAAMPGGHTKNLFLKDAKGQLWLISALGETTID LKKLHHVIGSGRLSFGPQEMMLETLGVTPGSVTAFGLINDTEKRVRFVLDKALADSDPVNFHPLKNDATTAVSQAGLRRF LAALGVEPMIVDFAAMEVVG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 355823 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 ASP n 1 5 LYS n 1 6 ILE n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 HIS n 1 12 HIS n 1 13 MSE n 1 14 LYS n 1 15 THR n 1 16 ARG n 1 17 ALA n 1 18 ASP n 1 19 LEU n 1 20 PHE n 1 21 ALA n 1 22 PHE n 1 23 PHE n 1 24 ASP n 1 25 ALA n 1 26 HIS n 1 27 GLY n 1 28 VAL n 1 29 ASP n 1 30 HIS n 1 31 LYS n 1 32 THR n 1 33 LEU n 1 34 ASP n 1 35 HIS n 1 36 PRO n 1 37 PRO n 1 38 VAL n 1 39 PHE n 1 40 ARG n 1 41 VAL n 1 42 GLU n 1 43 GLU n 1 44 GLY n 1 45 LEU n 1 46 GLU n 1 47 ILE n 1 48 LYS n 1 49 ALA n 1 50 ALA n 1 51 MSE n 1 52 PRO n 1 53 GLY n 1 54 GLY n 1 55 HIS n 1 56 THR n 1 57 LYS n 1 58 ASN n 1 59 LEU n 1 60 PHE n 1 61 LEU n 1 62 LYS n 1 63 ASP n 1 64 ALA n 1 65 LYS n 1 66 GLY n 1 67 GLN n 1 68 LEU n 1 69 TRP n 1 70 LEU n 1 71 ILE n 1 72 SER n 1 73 ALA n 1 74 LEU n 1 75 GLY n 1 76 GLU n 1 77 THR n 1 78 THR n 1 79 ILE n 1 80 ASP n 1 81 LEU n 1 82 LYS n 1 83 LYS n 1 84 LEU n 1 85 HIS n 1 86 HIS n 1 87 VAL n 1 88 ILE n 1 89 GLY n 1 90 SER n 1 91 GLY n 1 92 ARG n 1 93 LEU n 1 94 SER n 1 95 PHE n 1 96 GLY n 1 97 PRO n 1 98 GLN n 1 99 GLU n 1 100 MSE n 1 101 MSE n 1 102 LEU n 1 103 GLU n 1 104 THR n 1 105 LEU n 1 106 GLY n 1 107 VAL n 1 108 THR n 1 109 PRO n 1 110 GLY n 1 111 SER n 1 112 VAL n 1 113 THR n 1 114 ALA n 1 115 PHE n 1 116 GLY n 1 117 LEU n 1 118 ILE n 1 119 ASN n 1 120 ASP n 1 121 THR n 1 122 GLU n 1 123 LYS n 1 124 ARG n 1 125 VAL n 1 126 ARG n 1 127 PHE n 1 128 VAL n 1 129 LEU n 1 130 ASP n 1 131 LYS n 1 132 ALA n 1 133 LEU n 1 134 ALA n 1 135 ASP n 1 136 SER n 1 137 ASP n 1 138 PRO n 1 139 VAL n 1 140 ASN n 1 141 PHE n 1 142 HIS n 1 143 PRO n 1 144 LEU n 1 145 LYS n 1 146 ASN n 1 147 ASP n 1 148 ALA n 1 149 THR n 1 150 THR n 1 151 ALA n 1 152 VAL n 1 153 SER n 1 154 GLN n 1 155 ALA n 1 156 GLY n 1 157 LEU n 1 158 ARG n 1 159 ARG n 1 160 PHE n 1 161 LEU n 1 162 ALA n 1 163 ALA n 1 164 LEU n 1 165 GLY n 1 166 VAL n 1 167 GLU n 1 168 PRO n 1 169 MSE n 1 170 ILE n 1 171 VAL n 1 172 ASP n 1 173 PHE n 1 174 ALA n 1 175 ALA n 1 176 MSE n 1 177 GLU n 1 178 VAL n 1 179 VAL n 1 180 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Caulobacter _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species 'Caulobacter vibrioides' _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Caulobacter crescentus CB15' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 190650 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9ABV9_CAUCR _struct_ref.pdbx_db_accession Q9ABV9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKTRADLFAFFDAHGVDHKTLDHPPVFRVEEGLEIKAAMPGGHTKNLFLKDAKGQLWLISALGETTIDLKKLHHVIGSGR LSFGPQEMMLETLGVTPGSVTAFGLINDTEKRVRFVLDKALADSDPVNFHPLKNDATTAVSQAGLRRFLAALGVEPMIVD FAAMEVVG ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1VJF _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 13 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 180 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9ABV9 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 168 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 168 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1VJF MET A 1 ? UNP Q9ABV9 ? ? 'expression tag' -11 1 1 1VJF GLY A 2 ? UNP Q9ABV9 ? ? 'expression tag' -10 2 1 1VJF SER A 3 ? UNP Q9ABV9 ? ? 'expression tag' -9 3 1 1VJF ASP A 4 ? UNP Q9ABV9 ? ? 'expression tag' -8 4 1 1VJF LYS A 5 ? UNP Q9ABV9 ? ? 'expression tag' -7 5 1 1VJF ILE A 6 ? UNP Q9ABV9 ? ? 'expression tag' -6 6 1 1VJF HIS A 7 ? UNP Q9ABV9 ? ? 'expression tag' -5 7 1 1VJF HIS A 8 ? UNP Q9ABV9 ? ? 'expression tag' -4 8 1 1VJF HIS A 9 ? UNP Q9ABV9 ? ? 'expression tag' -3 9 1 1VJF HIS A 10 ? UNP Q9ABV9 ? ? 'expression tag' -2 10 1 1VJF HIS A 11 ? UNP Q9ABV9 ? ? 'expression tag' -1 11 1 1VJF HIS A 12 ? UNP Q9ABV9 ? ? 'expression tag' 0 12 1 1VJF MSE A 13 ? UNP Q9ABV9 MET ? 'modified residue' 1 13 1 1VJF MSE A 51 ? UNP Q9ABV9 MET 39 'modified residue' 39 14 1 1VJF MSE A 100 ? UNP Q9ABV9 MET 88 'modified residue' 88 15 1 1VJF MSE A 101 ? UNP Q9ABV9 MET 89 'modified residue' 89 16 1 1VJF MSE A 169 ? UNP Q9ABV9 MET 157 'modified residue' 157 17 1 1VJF MSE A 176 ? UNP Q9ABV9 MET 164 'modified residue' 164 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 1VJF # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 33.73 _exptl_crystal.density_Matthews 1.87 _exptl_crystal.density_meas ? _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION,SITTING DROP,NANODROP' _exptl_crystal_grow.pH 7.8 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '1.0M sodium citrate, 0.1M Tris pH 7.0, 0.2M NaCl, pH 7.8, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ADSC _diffrn_detector.details ? _diffrn_detector.pdbx_collection_date 2003-10-01 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double Crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.0000 1.0 2 0.9796 1.0 3 0.9794 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.pdbx_wavelength_list '1.0000, 0.9796, 0.9794' _diffrn_source.pdbx_wavelength ? # _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 1.620 _reflns.d_resolution_low 60.72 _reflns.number_obs 20981 _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_netI_over_sigmaI 19.3 _reflns.B_iso_Wilson_estimate 25.41 _reflns.pdbx_redundancy 7.7 _reflns.pdbx_Rsym_value 0.059 _reflns.entry_id 1VJF _reflns.number_all ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.62 _reflns_shell.d_res_low 1.66 _reflns_shell.percent_possible_all 98.6 _reflns_shell.pdbx_Rsym_value 0.562 _reflns_shell.pdbx_redundancy 7.9 _reflns_shell.number_unique_all 1498 _reflns_shell.meanI_over_sigI_obs 3.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.percent_possible_obs ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.ls_d_res_high 1.62 _refine.ls_d_res_low 46.94 _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_obs 19865 _refine.ls_number_reflns_R_free 1077 _refine.ls_percent_reflns_R_free 5.1 _refine.ls_percent_reflns_obs 99.15 _refine.ls_R_factor_obs 0.146 _refine.ls_R_factor_R_work 0.14488 _refine.ls_R_factor_R_free 0.16673 _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.B_iso_mean 17.787 _refine.aniso_B[1][1] 0.24 _refine.aniso_B[2][2] 0.24 _refine.aniso_B[3][3] -0.49 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_overall_ESU_R 0.079 _refine.pdbx_overall_ESU_R_Free 0.076 _refine.overall_SU_ML 0.047 _refine.overall_SU_B 2.609 _refine.correlation_coeff_Fo_to_Fc 0.972 _refine.correlation_coeff_Fo_to_Fc_free 0.967 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.entry_id 1VJF _refine.ls_R_factor_all ? _refine.ls_number_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1270 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.number_atoms_solvent 172 _refine_hist.number_atoms_total 1455 _refine_hist.d_res_high 1.62 _refine_hist.d_res_low 46.94 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1350 0.015 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1282 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1828 1.568 1.956 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2977 0.819 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 168 6.329 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 58 35.746 24.310 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 236 12.469 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 7 15.666 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 214 0.097 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1473 0.007 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 261 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 240 0.218 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1233 0.172 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 807 0.084 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 118 0.150 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 15 0.165 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 46 0.220 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 22 0.141 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 900 2.375 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 344 0.541 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1362 2.678 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 541 4.431 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 465 5.989 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.620 _refine_ls_shell.d_res_low 1.662 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.number_reflns_R_work 1424 _refine_ls_shell.R_factor_R_work 0.185 _refine_ls_shell.percent_reflns_R_free 4.75 _refine_ls_shell.number_reflns_R_free 71 _refine_ls_shell.R_factor_R_free 0.249 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1VJF _struct.title 'CRYSTAL STRUCTURE OF A PUTATIVE DNA-BINDING PROTEIN (CC_0111) FROM CAULOBACTER CRESCENTUS CB15 AT 1.62 A RESOLUTION' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'DNA BINDING PROTEIN, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' _struct_keywords.entry_id 1VJF # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 15 ? GLY A 27 ? THR A 3 GLY A 15 1 ? 13 HELX_P HELX_P2 2 ARG A 40 ? MSE A 51 ? ARG A 28 MSE A 39 1 ? 12 HELX_P HELX_P3 3 LYS A 83 ? GLY A 89 ? LYS A 71 GLY A 77 1 ? 7 HELX_P HELX_P4 4 PRO A 97 ? GLY A 106 ? PRO A 85 GLY A 94 1 ? 10 HELX_P HELX_P5 5 THR A 113 ? ASP A 120 ? THR A 101 ASP A 108 5 ? 8 HELX_P HELX_P6 6 LYS A 131 ? ASP A 135 ? LYS A 119 ASP A 123 1 ? 5 HELX_P HELX_P7 7 SER A 153 ? LEU A 164 ? SER A 141 LEU A 152 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 13 C ? ? ? 1_555 A LYS 14 N ? ? A MSE 1 A LYS 2 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale2 covale both ? A ALA 50 C ? ? ? 1_555 A MSE 51 N ? ? A ALA 38 A MSE 39 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale3 covale both ? A MSE 51 C ? ? ? 1_555 A PRO 52 N ? ? A MSE 39 A PRO 40 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale4 covale both ? A GLU 99 C ? ? ? 1_555 A MSE 100 N ? ? A GLU 87 A MSE 88 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale5 covale both ? A MSE 100 C ? ? ? 1_555 A MSE 101 N ? ? A MSE 88 A MSE 89 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale6 covale both ? A MSE 101 C ? ? ? 1_555 A LEU 102 N ? ? A MSE 89 A LEU 90 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale7 covale both ? A PRO 168 C ? ? ? 1_555 A MSE 169 N ? ? A PRO 156 A MSE 157 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale8 covale both ? A MSE 169 C ? ? ? 1_555 A ILE 170 N ? ? A MSE 157 A ILE 158 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale9 covale both ? A ALA 175 C ? ? ? 1_555 A MSE 176 N ? ? A ALA 163 A MSE 164 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale10 covale both ? A MSE 176 C ? ? ? 1_555 A GLU 177 N ? ? A MSE 164 A GLU 165 1_555 ? ? ? ? ? ? ? 1.336 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASP _struct_mon_prot_cis.label_seq_id 137 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASP _struct_mon_prot_cis.auth_seq_id 125 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 138 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 126 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -9.21 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? parallel B 6 7 ? parallel B 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 31 ? ASP A 34 ? LYS A 19 ASP A 22 A 2 ALA A 148 ? VAL A 152 ? ALA A 136 VAL A 140 A 3 VAL A 139 ? PHE A 141 ? VAL A 127 PHE A 129 A 4 GLY A 54 ? ASP A 63 ? GLY A 42 ASP A 51 A 5 LEU A 93 ? PHE A 95 ? LEU A 81 PHE A 83 B 1 LYS A 31 ? ASP A 34 ? LYS A 19 ASP A 22 B 2 ALA A 148 ? VAL A 152 ? ALA A 136 VAL A 140 B 3 VAL A 139 ? PHE A 141 ? VAL A 127 PHE A 129 B 4 GLY A 54 ? ASP A 63 ? GLY A 42 ASP A 51 B 5 LEU A 68 ? LEU A 74 ? LEU A 56 LEU A 62 B 6 VAL A 125 ? ASP A 130 ? VAL A 113 ASP A 118 B 7 MSE A 169 ? ASP A 172 ? MSE A 157 ASP A 160 B 8 GLU A 177 ? VAL A 179 ? GLU A 165 VAL A 167 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 31 ? N LYS A 19 O ALA A 151 ? O ALA A 139 A 2 3 O THR A 150 ? O THR A 138 N PHE A 141 ? N PHE A 129 A 3 4 O ASN A 140 ? O ASN A 128 N GLY A 54 ? N GLY A 42 A 4 5 N LYS A 62 ? N LYS A 50 O SER A 94 ? O SER A 82 B 1 2 N LYS A 31 ? N LYS A 19 O ALA A 151 ? O ALA A 139 B 2 3 O THR A 150 ? O THR A 138 N PHE A 141 ? N PHE A 129 B 3 4 O ASN A 140 ? O ASN A 128 N GLY A 54 ? N GLY A 42 B 4 5 N LEU A 61 ? N LEU A 49 O TRP A 69 ? O TRP A 57 B 5 6 N SER A 72 ? N SER A 60 O ASP A 130 ? O ASP A 118 B 6 7 N LEU A 129 ? N LEU A 117 O MSE A 169 ? O MSE A 157 B 7 8 N ILE A 170 ? N ILE A 158 O VAL A 179 ? O VAL A 167 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 169 ? 4 'BINDING SITE FOR RESIDUE CL A 169' AC2 Software A GOL 170 ? 8 'BINDING SITE FOR RESIDUE GOL A 170' AC3 Software A GOL 171 ? 8 'BINDING SITE FOR RESIDUE GOL A 171' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 SER A 153 ? SER A 141 . ? 1_555 ? 2 AC1 4 ARG A 159 ? ARG A 147 . ? 1_555 ? 3 AC1 4 HOH E . ? HOH A 179 . ? 6_556 ? 4 AC1 4 HOH E . ? HOH A 196 . ? 1_555 ? 5 AC2 8 LYS A 48 ? LYS A 36 . ? 1_555 ? 6 AC2 8 HIS A 142 ? HIS A 130 . ? 1_555 ? 7 AC2 8 HOH E . ? HOH A 177 . ? 1_555 ? 8 AC2 8 HOH E . ? HOH A 190 . ? 1_555 ? 9 AC2 8 HOH E . ? HOH A 193 . ? 1_555 ? 10 AC2 8 HOH E . ? HOH A 204 . ? 6_456 ? 11 AC2 8 HOH E . ? HOH A 254 . ? 1_555 ? 12 AC2 8 HOH E . ? HOH A 255 . ? 1_555 ? 13 AC3 8 LYS A 123 ? LYS A 111 . ? 1_555 ? 14 AC3 8 VAL A 125 ? VAL A 113 . ? 1_555 ? 15 AC3 8 ARG A 126 ? ARG A 114 . ? 1_555 ? 16 AC3 8 GLY A 165 ? GLY A 153 . ? 1_555 ? 17 AC3 8 VAL A 166 ? VAL A 154 . ? 1_555 ? 18 AC3 8 GLU A 167 ? GLU A 155 . ? 1_555 ? 19 AC3 8 HOH E . ? HOH A 211 . ? 1_555 ? 20 AC3 8 HOH E . ? HOH A 218 . ? 1_555 ? # _atom_sites.entry_id 1VJF _atom_sites.fract_transf_matrix[1][1] 0.019650 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019650 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008235 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -11 ? ? ? A . n A 1 2 GLY 2 -10 ? ? ? A . n A 1 3 SER 3 -9 ? ? ? A . n A 1 4 ASP 4 -8 ? ? ? A . n A 1 5 LYS 5 -7 ? ? ? A . n A 1 6 ILE 6 -6 ? ? ? A . n A 1 7 HIS 7 -5 ? ? ? A . n A 1 8 HIS 8 -4 ? ? ? A . n A 1 9 HIS 9 -3 ? ? ? A . n A 1 10 HIS 10 -2 ? ? ? A . n A 1 11 HIS 11 -1 ? ? ? A . n A 1 12 HIS 12 0 ? ? ? A . n A 1 13 MSE 13 1 1 MSE MSE A . n A 1 14 LYS 14 2 2 LYS LYS A . n A 1 15 THR 15 3 3 THR THR A . n A 1 16 ARG 16 4 4 ARG ARG A . n A 1 17 ALA 17 5 5 ALA ALA A . n A 1 18 ASP 18 6 6 ASP ASP A . n A 1 19 LEU 19 7 7 LEU LEU A . n A 1 20 PHE 20 8 8 PHE PHE A . n A 1 21 ALA 21 9 9 ALA ALA A . n A 1 22 PHE 22 10 10 PHE PHE A . n A 1 23 PHE 23 11 11 PHE PHE A . n A 1 24 ASP 24 12 12 ASP ASP A . n A 1 25 ALA 25 13 13 ALA ALA A . n A 1 26 HIS 26 14 14 HIS HIS A . n A 1 27 GLY 27 15 15 GLY GLY A . n A 1 28 VAL 28 16 16 VAL VAL A . n A 1 29 ASP 29 17 17 ASP ASP A . n A 1 30 HIS 30 18 18 HIS HIS A . n A 1 31 LYS 31 19 19 LYS LYS A . n A 1 32 THR 32 20 20 THR THR A . n A 1 33 LEU 33 21 21 LEU LEU A . n A 1 34 ASP 34 22 22 ASP ASP A . n A 1 35 HIS 35 23 23 HIS HIS A . n A 1 36 PRO 36 24 24 PRO PRO A . n A 1 37 PRO 37 25 25 PRO PRO A . n A 1 38 VAL 38 26 26 VAL VAL A . n A 1 39 PHE 39 27 27 PHE PHE A . n A 1 40 ARG 40 28 28 ARG ARG A . n A 1 41 VAL 41 29 29 VAL VAL A . n A 1 42 GLU 42 30 30 GLU GLU A . n A 1 43 GLU 43 31 31 GLU GLU A . n A 1 44 GLY 44 32 32 GLY GLY A . n A 1 45 LEU 45 33 33 LEU LEU A . n A 1 46 GLU 46 34 34 GLU GLU A . n A 1 47 ILE 47 35 35 ILE ILE A . n A 1 48 LYS 48 36 36 LYS LYS A . n A 1 49 ALA 49 37 37 ALA ALA A . n A 1 50 ALA 50 38 38 ALA ALA A . n A 1 51 MSE 51 39 39 MSE MSE A . n A 1 52 PRO 52 40 40 PRO PRO A . n A 1 53 GLY 53 41 41 GLY GLY A . n A 1 54 GLY 54 42 42 GLY GLY A . n A 1 55 HIS 55 43 43 HIS HIS A . n A 1 56 THR 56 44 44 THR THR A . n A 1 57 LYS 57 45 45 LYS LYS A . n A 1 58 ASN 58 46 46 ASN ASN A . n A 1 59 LEU 59 47 47 LEU LEU A . n A 1 60 PHE 60 48 48 PHE PHE A . n A 1 61 LEU 61 49 49 LEU LEU A . n A 1 62 LYS 62 50 50 LYS LYS A . n A 1 63 ASP 63 51 51 ASP ASP A . n A 1 64 ALA 64 52 52 ALA ALA A . n A 1 65 LYS 65 53 53 LYS LYS A . n A 1 66 GLY 66 54 54 GLY GLY A . n A 1 67 GLN 67 55 55 GLN GLN A . n A 1 68 LEU 68 56 56 LEU LEU A . n A 1 69 TRP 69 57 57 TRP TRP A . n A 1 70 LEU 70 58 58 LEU LEU A . n A 1 71 ILE 71 59 59 ILE ILE A . n A 1 72 SER 72 60 60 SER SER A . n A 1 73 ALA 73 61 61 ALA ALA A . n A 1 74 LEU 74 62 62 LEU LEU A . n A 1 75 GLY 75 63 63 GLY GLY A . n A 1 76 GLU 76 64 64 GLU GLU A . n A 1 77 THR 77 65 65 THR THR A . n A 1 78 THR 78 66 66 THR THR A . n A 1 79 ILE 79 67 67 ILE ILE A . n A 1 80 ASP 80 68 68 ASP ASP A . n A 1 81 LEU 81 69 69 LEU LEU A . n A 1 82 LYS 82 70 70 LYS LYS A . n A 1 83 LYS 83 71 71 LYS LYS A . n A 1 84 LEU 84 72 72 LEU LEU A . n A 1 85 HIS 85 73 73 HIS HIS A . n A 1 86 HIS 86 74 74 HIS HIS A . n A 1 87 VAL 87 75 75 VAL VAL A . n A 1 88 ILE 88 76 76 ILE ILE A . n A 1 89 GLY 89 77 77 GLY GLY A . n A 1 90 SER 90 78 78 SER SER A . n A 1 91 GLY 91 79 79 GLY GLY A . n A 1 92 ARG 92 80 80 ARG ARG A . n A 1 93 LEU 93 81 81 LEU LEU A . n A 1 94 SER 94 82 82 SER SER A . n A 1 95 PHE 95 83 83 PHE PHE A . n A 1 96 GLY 96 84 84 GLY GLY A . n A 1 97 PRO 97 85 85 PRO PRO A . n A 1 98 GLN 98 86 86 GLN GLN A . n A 1 99 GLU 99 87 87 GLU GLU A . n A 1 100 MSE 100 88 88 MSE MSE A . n A 1 101 MSE 101 89 89 MSE MSE A . n A 1 102 LEU 102 90 90 LEU LEU A . n A 1 103 GLU 103 91 91 GLU GLU A . n A 1 104 THR 104 92 92 THR THR A . n A 1 105 LEU 105 93 93 LEU LEU A . n A 1 106 GLY 106 94 94 GLY GLY A . n A 1 107 VAL 107 95 95 VAL VAL A . n A 1 108 THR 108 96 96 THR THR A . n A 1 109 PRO 109 97 97 PRO PRO A . n A 1 110 GLY 110 98 98 GLY GLY A . n A 1 111 SER 111 99 99 SER SER A . n A 1 112 VAL 112 100 100 VAL VAL A . n A 1 113 THR 113 101 101 THR THR A . n A 1 114 ALA 114 102 102 ALA ALA A . n A 1 115 PHE 115 103 103 PHE PHE A . n A 1 116 GLY 116 104 104 GLY GLY A . n A 1 117 LEU 117 105 105 LEU LEU A . n A 1 118 ILE 118 106 106 ILE ILE A . n A 1 119 ASN 119 107 107 ASN ASN A . n A 1 120 ASP 120 108 108 ASP ASP A . n A 1 121 THR 121 109 109 THR THR A . n A 1 122 GLU 122 110 110 GLU GLU A . n A 1 123 LYS 123 111 111 LYS LYS A . n A 1 124 ARG 124 112 112 ARG ARG A . n A 1 125 VAL 125 113 113 VAL VAL A . n A 1 126 ARG 126 114 114 ARG ARG A . n A 1 127 PHE 127 115 115 PHE PHE A . n A 1 128 VAL 128 116 116 VAL VAL A . n A 1 129 LEU 129 117 117 LEU LEU A . n A 1 130 ASP 130 118 118 ASP ASP A . n A 1 131 LYS 131 119 119 LYS LYS A . n A 1 132 ALA 132 120 120 ALA ALA A . n A 1 133 LEU 133 121 121 LEU LEU A . n A 1 134 ALA 134 122 122 ALA ALA A . n A 1 135 ASP 135 123 123 ASP ASP A . n A 1 136 SER 136 124 124 SER SER A . n A 1 137 ASP 137 125 125 ASP ASP A . n A 1 138 PRO 138 126 126 PRO PRO A . n A 1 139 VAL 139 127 127 VAL VAL A . n A 1 140 ASN 140 128 128 ASN ASN A . n A 1 141 PHE 141 129 129 PHE PHE A . n A 1 142 HIS 142 130 130 HIS HIS A . n A 1 143 PRO 143 131 131 PRO PRO A . n A 1 144 LEU 144 132 132 LEU LEU A . n A 1 145 LYS 145 133 133 LYS LYS A . n A 1 146 ASN 146 134 134 ASN ASN A . n A 1 147 ASP 147 135 135 ASP ASP A . n A 1 148 ALA 148 136 136 ALA ALA A . n A 1 149 THR 149 137 137 THR THR A . n A 1 150 THR 150 138 138 THR THR A . n A 1 151 ALA 151 139 139 ALA ALA A . n A 1 152 VAL 152 140 140 VAL VAL A . n A 1 153 SER 153 141 141 SER SER A . n A 1 154 GLN 154 142 142 GLN GLN A . n A 1 155 ALA 155 143 143 ALA ALA A . n A 1 156 GLY 156 144 144 GLY GLY A . n A 1 157 LEU 157 145 145 LEU LEU A . n A 1 158 ARG 158 146 146 ARG ARG A . n A 1 159 ARG 159 147 147 ARG ARG A . n A 1 160 PHE 160 148 148 PHE PHE A . n A 1 161 LEU 161 149 149 LEU LEU A . n A 1 162 ALA 162 150 150 ALA ALA A . n A 1 163 ALA 163 151 151 ALA ALA A . n A 1 164 LEU 164 152 152 LEU LEU A . n A 1 165 GLY 165 153 153 GLY GLY A . n A 1 166 VAL 166 154 154 VAL VAL A . n A 1 167 GLU 167 155 155 GLU GLU A . n A 1 168 PRO 168 156 156 PRO PRO A . n A 1 169 MSE 169 157 157 MSE MSE A . n A 1 170 ILE 170 158 158 ILE ILE A . n A 1 171 VAL 171 159 159 VAL VAL A . n A 1 172 ASP 172 160 160 ASP ASP A . n A 1 173 PHE 173 161 161 PHE PHE A . n A 1 174 ALA 174 162 162 ALA ALA A . n A 1 175 ALA 175 163 163 ALA ALA A . n A 1 176 MSE 176 164 164 MSE MSE A . n A 1 177 GLU 177 165 165 GLU GLU A . n A 1 178 VAL 178 166 166 VAL VAL A . n A 1 179 VAL 179 167 167 VAL VAL A . n A 1 180 GLY 180 168 168 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 169 1 CL CL A . C 3 GOL 1 170 2 GOL GOL A . D 3 GOL 1 171 3 GOL GOL A . E 4 HOH 1 172 4 HOH HOH A . E 4 HOH 2 173 5 HOH HOH A . E 4 HOH 3 174 6 HOH HOH A . E 4 HOH 4 175 7 HOH HOH A . E 4 HOH 5 176 8 HOH HOH A . E 4 HOH 6 177 9 HOH HOH A . E 4 HOH 7 178 10 HOH HOH A . E 4 HOH 8 179 11 HOH HOH A . E 4 HOH 9 180 12 HOH HOH A . E 4 HOH 10 181 13 HOH HOH A . E 4 HOH 11 182 14 HOH HOH A . E 4 HOH 12 183 15 HOH HOH A . E 4 HOH 13 184 16 HOH HOH A . E 4 HOH 14 185 17 HOH HOH A . E 4 HOH 15 186 18 HOH HOH A . E 4 HOH 16 187 19 HOH HOH A . E 4 HOH 17 188 20 HOH HOH A . E 4 HOH 18 189 21 HOH HOH A . E 4 HOH 19 190 22 HOH HOH A . E 4 HOH 20 191 23 HOH HOH A . E 4 HOH 21 192 24 HOH HOH A . E 4 HOH 22 193 25 HOH HOH A . E 4 HOH 23 194 26 HOH HOH A . E 4 HOH 24 195 27 HOH HOH A . E 4 HOH 25 196 28 HOH HOH A . E 4 HOH 26 197 29 HOH HOH A . E 4 HOH 27 198 30 HOH HOH A . E 4 HOH 28 199 31 HOH HOH A . E 4 HOH 29 200 32 HOH HOH A . E 4 HOH 30 201 33 HOH HOH A . E 4 HOH 31 202 34 HOH HOH A . E 4 HOH 32 203 35 HOH HOH A . E 4 HOH 33 204 36 HOH HOH A . E 4 HOH 34 205 37 HOH HOH A . E 4 HOH 35 206 38 HOH HOH A . E 4 HOH 36 207 39 HOH HOH A . E 4 HOH 37 208 40 HOH HOH A . E 4 HOH 38 209 41 HOH HOH A . E 4 HOH 39 210 42 HOH HOH A . E 4 HOH 40 211 43 HOH HOH A . E 4 HOH 41 212 44 HOH HOH A . E 4 HOH 42 213 45 HOH HOH A . E 4 HOH 43 214 46 HOH HOH A . E 4 HOH 44 215 47 HOH HOH A . E 4 HOH 45 216 48 HOH HOH A . E 4 HOH 46 217 49 HOH HOH A . E 4 HOH 47 218 50 HOH HOH A . E 4 HOH 48 219 51 HOH HOH A . E 4 HOH 49 220 52 HOH HOH A . E 4 HOH 50 221 53 HOH HOH A . E 4 HOH 51 222 54 HOH HOH A . E 4 HOH 52 223 55 HOH HOH A . E 4 HOH 53 224 56 HOH HOH A . E 4 HOH 54 225 57 HOH HOH A . E 4 HOH 55 226 58 HOH HOH A . E 4 HOH 56 227 59 HOH HOH A . E 4 HOH 57 228 60 HOH HOH A . E 4 HOH 58 229 61 HOH HOH A . E 4 HOH 59 230 62 HOH HOH A . E 4 HOH 60 231 63 HOH HOH A . E 4 HOH 61 232 64 HOH HOH A . E 4 HOH 62 233 65 HOH HOH A . E 4 HOH 63 234 66 HOH HOH A . E 4 HOH 64 235 67 HOH HOH A . E 4 HOH 65 236 68 HOH HOH A . E 4 HOH 66 237 69 HOH HOH A . E 4 HOH 67 238 70 HOH HOH A . E 4 HOH 68 239 71 HOH HOH A . E 4 HOH 69 240 72 HOH HOH A . E 4 HOH 70 241 73 HOH HOH A . E 4 HOH 71 242 74 HOH HOH A . E 4 HOH 72 243 75 HOH HOH A . E 4 HOH 73 244 76 HOH HOH A . E 4 HOH 74 245 77 HOH HOH A . E 4 HOH 75 246 78 HOH HOH A . E 4 HOH 76 247 79 HOH HOH A . E 4 HOH 77 248 80 HOH HOH A . E 4 HOH 78 249 81 HOH HOH A . E 4 HOH 79 250 82 HOH HOH A . E 4 HOH 80 251 83 HOH HOH A . E 4 HOH 81 252 84 HOH HOH A . E 4 HOH 82 253 85 HOH HOH A . E 4 HOH 83 254 86 HOH HOH A . E 4 HOH 84 255 87 HOH HOH A . E 4 HOH 85 256 88 HOH HOH A . E 4 HOH 86 257 89 HOH HOH A . E 4 HOH 87 258 90 HOH HOH A . E 4 HOH 88 259 91 HOH HOH A . E 4 HOH 89 260 92 HOH HOH A . E 4 HOH 90 261 93 HOH HOH A . E 4 HOH 91 262 94 HOH HOH A . E 4 HOH 92 263 95 HOH HOH A . E 4 HOH 93 264 96 HOH HOH A . E 4 HOH 94 265 97 HOH HOH A . E 4 HOH 95 266 98 HOH HOH A . E 4 HOH 96 267 99 HOH HOH A . E 4 HOH 97 268 100 HOH HOH A . E 4 HOH 98 269 101 HOH HOH A . E 4 HOH 99 270 102 HOH HOH A . E 4 HOH 100 271 103 HOH HOH A . E 4 HOH 101 272 104 HOH HOH A . E 4 HOH 102 273 105 HOH HOH A . E 4 HOH 103 274 106 HOH HOH A . E 4 HOH 104 275 107 HOH HOH A . E 4 HOH 105 276 108 HOH HOH A . E 4 HOH 106 277 109 HOH HOH A . E 4 HOH 107 278 110 HOH HOH A . E 4 HOH 108 279 111 HOH HOH A . E 4 HOH 109 280 112 HOH HOH A . E 4 HOH 110 281 113 HOH HOH A . E 4 HOH 111 282 114 HOH HOH A . E 4 HOH 112 283 115 HOH HOH A . E 4 HOH 113 284 116 HOH HOH A . E 4 HOH 114 285 117 HOH HOH A . E 4 HOH 115 286 118 HOH HOH A . E 4 HOH 116 287 119 HOH HOH A . E 4 HOH 117 288 120 HOH HOH A . E 4 HOH 118 289 121 HOH HOH A . E 4 HOH 119 290 122 HOH HOH A . E 4 HOH 120 291 123 HOH HOH A . E 4 HOH 121 292 124 HOH HOH A . E 4 HOH 122 293 125 HOH HOH A . E 4 HOH 123 294 126 HOH HOH A . E 4 HOH 124 295 127 HOH HOH A . E 4 HOH 125 296 128 HOH HOH A . E 4 HOH 126 297 129 HOH HOH A . E 4 HOH 127 298 130 HOH HOH A . E 4 HOH 128 299 131 HOH HOH A . E 4 HOH 129 300 132 HOH HOH A . E 4 HOH 130 301 133 HOH HOH A . E 4 HOH 131 302 134 HOH HOH A . E 4 HOH 132 303 135 HOH HOH A . E 4 HOH 133 304 136 HOH HOH A . E 4 HOH 134 305 137 HOH HOH A . E 4 HOH 135 306 138 HOH HOH A . E 4 HOH 136 307 139 HOH HOH A . E 4 HOH 137 308 140 HOH HOH A . E 4 HOH 138 309 141 HOH HOH A . E 4 HOH 139 310 142 HOH HOH A . E 4 HOH 140 311 143 HOH HOH A . E 4 HOH 141 312 144 HOH HOH A . E 4 HOH 142 313 145 HOH HOH A . E 4 HOH 143 314 146 HOH HOH A . E 4 HOH 144 315 147 HOH HOH A . E 4 HOH 145 316 148 HOH HOH A . E 4 HOH 146 317 149 HOH HOH A . E 4 HOH 147 318 150 HOH HOH A . E 4 HOH 148 319 151 HOH HOH A . E 4 HOH 149 320 152 HOH HOH A . E 4 HOH 150 321 153 HOH HOH A . E 4 HOH 151 322 154 HOH HOH A . E 4 HOH 152 323 155 HOH HOH A . E 4 HOH 153 324 156 HOH HOH A . E 4 HOH 154 325 157 HOH HOH A . E 4 HOH 155 326 158 HOH HOH A . E 4 HOH 156 327 159 HOH HOH A . E 4 HOH 157 328 160 HOH HOH A . E 4 HOH 158 329 161 HOH HOH A . E 4 HOH 159 330 162 HOH HOH A . E 4 HOH 160 331 163 HOH HOH A . E 4 HOH 161 332 164 HOH HOH A . E 4 HOH 162 333 165 HOH HOH A . E 4 HOH 163 334 166 HOH HOH A . E 4 HOH 164 335 167 HOH HOH A . E 4 HOH 165 336 168 HOH HOH A . E 4 HOH 166 337 169 HOH HOH A . E 4 HOH 167 338 170 HOH HOH A . E 4 HOH 168 339 172 HOH HOH A . E 4 HOH 169 340 173 HOH HOH A . E 4 HOH 170 341 174 HOH HOH A . E 4 HOH 171 342 175 HOH HOH A . E 4 HOH 172 343 176 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 13 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 51 A MSE 39 ? MET SELENOMETHIONINE 3 A MSE 100 A MSE 88 ? MET SELENOMETHIONINE 4 A MSE 101 A MSE 89 ? MET SELENOMETHIONINE 5 A MSE 169 A MSE 157 ? MET SELENOMETHIONINE 6 A MSE 176 A MSE 164 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 343 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id E _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-03-09 2 'Structure model' 1 1 2008-04-26 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_conn 3 4 'Structure model' struct_ref_seq_dif 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details . _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 11.9160 _pdbx_refine_tls.origin_y 9.9720 _pdbx_refine_tls.origin_z 79.2490 _pdbx_refine_tls.T[1][1] -0.0695 _pdbx_refine_tls.T[2][2] -0.0156 _pdbx_refine_tls.T[3][3] -0.0971 _pdbx_refine_tls.T[1][2] 0.0211 _pdbx_refine_tls.T[1][3] 0.0086 _pdbx_refine_tls.T[2][3] 0.0178 _pdbx_refine_tls.L[1][1] 1.5754 _pdbx_refine_tls.L[2][2] 0.8905 _pdbx_refine_tls.L[3][3] 0.9649 _pdbx_refine_tls.L[1][2] -0.1280 _pdbx_refine_tls.L[1][3] -0.4375 _pdbx_refine_tls.L[2][3] 0.4608 _pdbx_refine_tls.S[1][1] -0.1337 _pdbx_refine_tls.S[2][2] 0.0699 _pdbx_refine_tls.S[3][3] 0.0638 _pdbx_refine_tls.S[1][2] -0.1335 _pdbx_refine_tls.S[1][3] -0.0419 _pdbx_refine_tls.S[2][3] 0.0422 _pdbx_refine_tls.S[2][1] 0.0789 _pdbx_refine_tls.S[3][1] 0.1249 _pdbx_refine_tls.S[3][2] 0.0921 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 13 _pdbx_refine_tls_group.end_label_asym_id B _pdbx_refine_tls_group.end_label_seq_id 1 _pdbx_refine_tls_group.selection ALL _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 169 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MOSFLM 'data reduction' . ? 1 SCALA 'data scaling' '4.2)' ? 2 SOLVE phasing . ? 3 RESOLVE 'model building' . ? 4 REFMAC refinement 5.2.0000 ? 5 CCP4 'data scaling' '(SCALA)' ? 6 RESOLVE phasing . ? 7 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 147 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 147 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 147 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 125.03 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 4.73 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id LEU _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 132 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 75.15 _pdbx_validate_torsion.psi -0.53 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 19 ? CD ? A LYS 31 CD 2 1 Y 1 A LYS 19 ? CE ? A LYS 31 CE 3 1 Y 1 A LYS 19 ? NZ ? A LYS 31 NZ 4 1 Y 1 A LYS 53 ? CE ? A LYS 65 CE 5 1 Y 1 A LYS 53 ? NZ ? A LYS 65 NZ 6 1 Y 1 A LYS 70 ? CE ? A LYS 82 CE 7 1 Y 1 A LYS 70 ? NZ ? A LYS 82 NZ 8 1 Y 1 A LYS 71 ? NZ ? A LYS 83 NZ 9 1 Y 1 A ARG 80 ? NE ? A ARG 92 NE 10 1 Y 1 A ARG 80 ? CZ ? A ARG 92 CZ 11 1 Y 1 A ARG 80 ? NH1 ? A ARG 92 NH1 12 1 Y 1 A ARG 80 ? NH2 ? A ARG 92 NH2 13 1 Y 1 A GLY 168 ? CA ? A GLY 180 CA 14 1 Y 1 A GLY 168 ? C ? A GLY 180 C 15 1 Y 1 A GLY 168 ? O ? A GLY 180 O # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -11 ? A MET 1 2 1 Y 1 A GLY -10 ? A GLY 2 3 1 Y 1 A SER -9 ? A SER 3 4 1 Y 1 A ASP -8 ? A ASP 4 5 1 Y 1 A LYS -7 ? A LYS 5 6 1 Y 1 A ILE -6 ? A ILE 6 7 1 Y 1 A HIS -5 ? A HIS 7 8 1 Y 1 A HIS -4 ? A HIS 8 9 1 Y 1 A HIS -3 ? A HIS 9 10 1 Y 1 A HIS -2 ? A HIS 10 11 1 Y 1 A HIS -1 ? A HIS 11 12 1 Y 1 A HIS 0 ? A HIS 12 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 GLYCEROL GOL 4 water HOH #