data_1VJQ # _entry.id 1VJQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1VJQ pdb_00001vjq 10.2210/pdb1vjq/pdb RCSB RCSB001927 ? ? WWPDB D_1000001927 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-03-30 2 'Structure model' 1 1 2008-04-26 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-04 5 'Structure model' 1 4 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.entry_id 1VJQ _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2004-03-19 _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id DBsf000001AYE _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Merritt, E.A.' 1 'Baker, D.' 2 'Structural Genomics of Pathogenic Protozoa Consortium (SGPP)' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Designed protein based on backbone conformation of procarboxypeptidase-A (1AYE) with sidechains chosen for maximal predicted stability. ; 'To be Published' ? ? ? ? ? ? ? 0353 ? ? ? 1 'A large scale test of computational protein design: folding and stability of nine completely redesigned globular proteins.' J.Mol.Biol. 332 449 460 2003 JMOBAK UK 0022-2836 0070 ? 12948494 '10.1016/S0022-2836(03)00888-X' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kuhlman, B.' 1 ? primary 'Dantas, G.' 2 ? primary 'Merritt, E.A.' 3 ? primary 'Baker, D.' 4 ? 1 'Dantas, G.' 5 ? 1 'Kuhlman, B.' 6 ? 1 'Callender, D.' 7 ? 1 'Wong, M.' 8 ? 1 'Baker, D.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'designed protein' 9144.039 2 ? ? ? ? 2 water nat water 18.015 66 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;KTIFVIVPTNEEQVAFLEALAKQDELNFDWQNPPTEPGQPVVILIPSD(MSE)VEWFLE(MSE)LKAKGIPFTVYVEEGG SENKYFQ ; _entity_poly.pdbx_seq_one_letter_code_can KTIFVIVPTNEEQVAFLEALAKQDELNFDWQNPPTEPGQPVVILIPSDMVEWFLEMLKAKGIPFTVYVEEGGSENKYFQ _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier DBsf000001AYE # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 THR n 1 3 ILE n 1 4 PHE n 1 5 VAL n 1 6 ILE n 1 7 VAL n 1 8 PRO n 1 9 THR n 1 10 ASN n 1 11 GLU n 1 12 GLU n 1 13 GLN n 1 14 VAL n 1 15 ALA n 1 16 PHE n 1 17 LEU n 1 18 GLU n 1 19 ALA n 1 20 LEU n 1 21 ALA n 1 22 LYS n 1 23 GLN n 1 24 ASP n 1 25 GLU n 1 26 LEU n 1 27 ASN n 1 28 PHE n 1 29 ASP n 1 30 TRP n 1 31 GLN n 1 32 ASN n 1 33 PRO n 1 34 PRO n 1 35 THR n 1 36 GLU n 1 37 PRO n 1 38 GLY n 1 39 GLN n 1 40 PRO n 1 41 VAL n 1 42 VAL n 1 43 ILE n 1 44 LEU n 1 45 ILE n 1 46 PRO n 1 47 SER n 1 48 ASP n 1 49 MSE n 1 50 VAL n 1 51 GLU n 1 52 TRP n 1 53 PHE n 1 54 LEU n 1 55 GLU n 1 56 MSE n 1 57 LEU n 1 58 LYS n 1 59 ALA n 1 60 LYS n 1 61 GLY n 1 62 ILE n 1 63 PRO n 1 64 PHE n 1 65 THR n 1 66 VAL n 1 67 TYR n 1 68 VAL n 1 69 GLU n 1 70 GLU n 1 71 GLY n 1 72 GLY n 1 73 SER n 1 74 GLU n 1 75 ASN n 1 76 LYS n 1 77 TYR n 1 78 PHE n 1 79 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name ? _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id ? _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector plasmid _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET3a _entity_src_gen.plasmid_details 'Designed protein Cloned as fusion with structural genomics target Lmaj000047AAA' _entity_src_gen.pdbx_description 'Cloned as fusion with structural genomics target Lmaj000047AAA' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 1 1 LYS LYS A . n A 1 2 THR 2 2 2 THR THR A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 PHE 4 4 4 PHE PHE A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 GLN 13 13 13 GLN GLN A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 PHE 16 16 16 PHE PHE A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 GLN 23 23 23 GLN GLN A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 PHE 28 28 28 PHE PHE A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 TRP 30 30 30 TRP TRP A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 ASN 32 32 32 ASN ASN A . n A 1 33 PRO 33 33 33 PRO PRO A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 GLN 39 39 39 GLN GLN A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 ILE 43 43 43 ILE ILE A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 MSE 49 49 49 MSE MSE A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 TRP 52 52 52 TRP TRP A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 MSE 56 56 56 MSE MSE A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 PRO 63 63 63 PRO PRO A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 TYR 67 67 67 TYR TYR A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 SER 73 73 73 SER SER A . n A 1 74 GLU 74 74 ? ? ? A . n A 1 75 ASN 75 75 ? ? ? A . n A 1 76 LYS 76 76 ? ? ? A . n A 1 77 TYR 77 77 ? ? ? A . n A 1 78 PHE 78 78 ? ? ? A . n A 1 79 GLN 79 79 ? ? ? A . n B 1 1 LYS 1 1 1 LYS LYS B . n B 1 2 THR 2 2 2 THR THR B . n B 1 3 ILE 3 3 3 ILE ILE B . n B 1 4 PHE 4 4 4 PHE PHE B . n B 1 5 VAL 5 5 5 VAL VAL B . n B 1 6 ILE 6 6 6 ILE ILE B . n B 1 7 VAL 7 7 7 VAL VAL B . n B 1 8 PRO 8 8 8 PRO PRO B . n B 1 9 THR 9 9 9 THR THR B . n B 1 10 ASN 10 10 10 ASN ASN B . n B 1 11 GLU 11 11 11 GLU GLU B . n B 1 12 GLU 12 12 12 GLU GLU B . n B 1 13 GLN 13 13 13 GLN GLN B . n B 1 14 VAL 14 14 14 VAL VAL B . n B 1 15 ALA 15 15 15 ALA ALA B . n B 1 16 PHE 16 16 16 PHE PHE B . n B 1 17 LEU 17 17 17 LEU LEU B . n B 1 18 GLU 18 18 18 GLU GLU B . n B 1 19 ALA 19 19 19 ALA ALA B . n B 1 20 LEU 20 20 20 LEU LEU B . n B 1 21 ALA 21 21 21 ALA ALA B . n B 1 22 LYS 22 22 22 LYS LYS B . n B 1 23 GLN 23 23 23 GLN GLN B . n B 1 24 ASP 24 24 24 ASP ASP B . n B 1 25 GLU 25 25 25 GLU GLU B . n B 1 26 LEU 26 26 26 LEU LEU B . n B 1 27 ASN 27 27 27 ASN ASN B . n B 1 28 PHE 28 28 28 PHE PHE B . n B 1 29 ASP 29 29 29 ASP ASP B . n B 1 30 TRP 30 30 30 TRP TRP B . n B 1 31 GLN 31 31 31 GLN GLN B . n B 1 32 ASN 32 32 32 ASN ASN B . n B 1 33 PRO 33 33 33 PRO PRO B . n B 1 34 PRO 34 34 34 PRO PRO B . n B 1 35 THR 35 35 35 THR THR B . n B 1 36 GLU 36 36 36 GLU GLU B . n B 1 37 PRO 37 37 37 PRO PRO B . n B 1 38 GLY 38 38 38 GLY GLY B . n B 1 39 GLN 39 39 39 GLN GLN B . n B 1 40 PRO 40 40 40 PRO PRO B . n B 1 41 VAL 41 41 41 VAL VAL B . n B 1 42 VAL 42 42 42 VAL VAL B . n B 1 43 ILE 43 43 43 ILE ILE B . n B 1 44 LEU 44 44 44 LEU LEU B . n B 1 45 ILE 45 45 45 ILE ILE B . n B 1 46 PRO 46 46 46 PRO PRO B . n B 1 47 SER 47 47 47 SER SER B . n B 1 48 ASP 48 48 48 ASP ASP B . n B 1 49 MSE 49 49 49 MSE MSE B . n B 1 50 VAL 50 50 50 VAL VAL B . n B 1 51 GLU 51 51 51 GLU GLU B . n B 1 52 TRP 52 52 52 TRP TRP B . n B 1 53 PHE 53 53 53 PHE PHE B . n B 1 54 LEU 54 54 54 LEU LEU B . n B 1 55 GLU 55 55 55 GLU GLU B . n B 1 56 MSE 56 56 56 MSE MSE B . n B 1 57 LEU 57 57 57 LEU LEU B . n B 1 58 LYS 58 58 58 LYS LYS B . n B 1 59 ALA 59 59 59 ALA ALA B . n B 1 60 LYS 60 60 60 LYS LYS B . n B 1 61 GLY 61 61 61 GLY GLY B . n B 1 62 ILE 62 62 62 ILE ILE B . n B 1 63 PRO 63 63 63 PRO PRO B . n B 1 64 PHE 64 64 64 PHE PHE B . n B 1 65 THR 65 65 65 THR THR B . n B 1 66 VAL 66 66 66 VAL VAL B . n B 1 67 TYR 67 67 67 TYR TYR B . n B 1 68 VAL 68 68 68 VAL VAL B . n B 1 69 GLU 69 69 69 GLU GLU B . n B 1 70 GLU 70 70 70 GLU GLU B . n B 1 71 GLY 71 71 71 GLY GLY B . n B 1 72 GLY 72 72 72 GLY GLY B . n B 1 73 SER 73 73 73 SER SER B . n B 1 74 GLU 74 74 ? ? ? B . n B 1 75 ASN 75 75 ? ? ? B . n B 1 76 LYS 76 76 ? ? ? B . n B 1 77 TYR 77 77 ? ? ? B . n B 1 78 PHE 78 78 ? ? ? B . n B 1 79 GLN 79 79 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 80 1 HOH HOH A . C 2 HOH 2 81 2 HOH HOH A . C 2 HOH 3 82 5 HOH HOH A . C 2 HOH 4 83 6 HOH HOH A . C 2 HOH 5 84 9 HOH HOH A . C 2 HOH 6 85 10 HOH HOH A . C 2 HOH 7 86 11 HOH HOH A . C 2 HOH 8 87 12 HOH HOH A . C 2 HOH 9 88 13 HOH HOH A . C 2 HOH 10 89 16 HOH HOH A . C 2 HOH 11 90 17 HOH HOH A . C 2 HOH 12 91 20 HOH HOH A . C 2 HOH 13 92 25 HOH HOH A . C 2 HOH 14 93 26 HOH HOH A . C 2 HOH 15 94 28 HOH HOH A . C 2 HOH 16 95 30 HOH HOH A . C 2 HOH 17 96 31 HOH HOH A . C 2 HOH 18 97 33 HOH HOH A . C 2 HOH 19 98 35 HOH HOH A . C 2 HOH 20 99 36 HOH HOH A . C 2 HOH 21 100 37 HOH HOH A . C 2 HOH 22 101 41 HOH HOH A . C 2 HOH 23 102 43 HOH HOH A . C 2 HOH 24 103 47 HOH HOH A . C 2 HOH 25 104 50 HOH HOH A . C 2 HOH 26 105 54 HOH HOH A . C 2 HOH 27 106 56 HOH HOH A . C 2 HOH 28 107 59 HOH HOH A . C 2 HOH 29 108 61 HOH HOH A . C 2 HOH 30 109 66 HOH HOH A . D 2 HOH 1 80 3 HOH HOH B . D 2 HOH 2 81 4 HOH HOH B . D 2 HOH 3 82 7 HOH HOH B . D 2 HOH 4 83 8 HOH HOH B . D 2 HOH 5 84 14 HOH HOH B . D 2 HOH 6 85 15 HOH HOH B . D 2 HOH 7 86 18 HOH HOH B . D 2 HOH 8 87 19 HOH HOH B . D 2 HOH 9 88 21 HOH HOH B . D 2 HOH 10 89 22 HOH HOH B . D 2 HOH 11 90 23 HOH HOH B . D 2 HOH 12 91 24 HOH HOH B . D 2 HOH 13 92 27 HOH HOH B . D 2 HOH 14 93 29 HOH HOH B . D 2 HOH 15 94 32 HOH HOH B . D 2 HOH 16 95 34 HOH HOH B . D 2 HOH 17 96 38 HOH HOH B . D 2 HOH 18 97 39 HOH HOH B . D 2 HOH 19 98 40 HOH HOH B . D 2 HOH 20 99 42 HOH HOH B . D 2 HOH 21 100 44 HOH HOH B . D 2 HOH 22 101 45 HOH HOH B . D 2 HOH 23 102 48 HOH HOH B . D 2 HOH 24 103 49 HOH HOH B . D 2 HOH 25 104 51 HOH HOH B . D 2 HOH 26 105 52 HOH HOH B . D 2 HOH 27 106 53 HOH HOH B . D 2 HOH 28 107 55 HOH HOH B . D 2 HOH 29 108 57 HOH HOH B . D 2 HOH 30 109 58 HOH HOH B . D 2 HOH 31 110 60 HOH HOH B . D 2 HOH 32 111 62 HOH HOH B . D 2 HOH 33 112 63 HOH HOH B . D 2 HOH 34 113 64 HOH HOH B . D 2 HOH 35 114 65 HOH HOH B . D 2 HOH 36 115 67 HOH HOH B . # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 SOLVE 2.06 28-Dec-2003 program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran ? 4 RESOLVE 2.06 02-Jan-2004 program 'Terwilliger, T. C' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 5 REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran ? 6 SHELXD . ? ? ? ? phasing ? ? ? 7 # _cell.length_a 61.442 _cell.length_b 65.041 _cell.length_c 39.201 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 1VJQ _cell.pdbx_unique_axis ? _cell.Z_PDB 8 # _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.entry_id 1VJQ _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 18 _symmetry.cell_setting ? # _exptl.entry_id 1VJQ _exptl.crystals_number ? _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 42.52 _exptl_crystal.density_Matthews 2.14 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 290 _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_details ;1 ul protein 6.87 mg/ml 1 ul crystallization buffer 20% PEG 1000, 40 mM CaCl, 100 mM NaAc 1 ul micro-seeds of sulfur-Met protein in crystallization buffer, pH 5.0, VAPOR DIFFUSION, SITTING DROP, temperature 290K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2004-01-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97954 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.pdbx_wavelength 0.97954 _diffrn_source.pdbx_wavelength_list ? _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.1 # _reflns.entry_id 1VJQ _reflns.d_resolution_high 2.098 _reflns.d_resolution_low 44.721 _reflns.limit_h_max 29 _reflns.limit_h_min 0 _reflns.limit_k_max 30 _reflns.limit_k_min 0 _reflns.limit_l_max 18 _reflns.limit_l_min 0 _reflns.number_all ? _reflns.number_obs 8236 _reflns.percent_possible_obs 85.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.pdbx_Rmerge_I_obs 0.108 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_I_obs _reflns_shell.percent_possible_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_redundancy _reflns_shell.number_unique_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.10 2.18 32.900 0.375 ? ? ? ? ? 1 1 2.18 2.26 53.300 0.393 ? ? ? ? ? 2 1 2.26 2.37 71.900 0.362 ? ? ? ? ? 3 1 2.37 2.49 89.100 0.34 ? ? ? ? ? 4 1 2.49 2.65 99.600 0.301 ? ? ? ? ? 5 1 2.65 2.85 100.000 0.255 ? ? ? ? ? 6 1 2.85 3.14 100.000 0.17 ? ? ? ? ? 7 1 3.14 3.59 100.000 0.102 ? ? ? ? ? 8 1 3.59 4.52 100.000 0.071 ? ? ? ? ? 9 1 4.52 50.00 100.000 0.066 ? ? ? ? ? 10 1 # _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.B_iso_mean 27.261 _refine.aniso_B[1][1] -1.098 _refine.aniso_B[2][2] 3.071 _refine.aniso_B[3][3] -1.973 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details 'BABINET MODEL PLUS MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_d_res_high 2.098 _refine.ls_d_res_low 44.721 _refine.ls_number_reflns_R_free 386 _refine.ls_R_factor_R_work 0.1991 _refine.ls_R_factor_R_free 0.2906 _refine.ls_R_factor_all 0.203 _refine.ls_percent_reflns_R_free 4.779 _refine.correlation_coeff_Fo_to_Fc 0.943 _refine.correlation_coeff_Fo_to_Fc_free 0.880 _refine.overall_SU_R_Cruickshank_DPI 0.306 _refine.pdbx_overall_ESU_R_Free 0.265 _refine.overall_SU_ML 0.164 _refine.overall_SU_B 12.164 _refine.entry_id 1VJQ _refine.ls_R_factor_obs ? _refine.ls_number_reflns_obs 8077 _refine.ls_percent_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_overall_ESU_R 0.306 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1162 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 66 _refine_hist.number_atoms_total 1228 _refine_hist.d_res_high 2.098 _refine_hist.d_res_low 44.721 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1211 0.014 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1094 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1657 1.411 1.954 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2577 0.890 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 144 5.902 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 57 42.045 27.193 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 202 19.789 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 187 0.098 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1320 0.004 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 208 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 238 0.195 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1085 0.184 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 602 0.178 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 671 0.091 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 52 0.415 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 9 0.148 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 39 0.196 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 3 0.232 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 888 1.857 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 290 0.408 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1219 2.381 4.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_other 999 1.490 4.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 542 1.087 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_other 1010 0.219 2.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 438 1.730 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_other 1578 0.780 3.000 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_low _refine_ls_shell.d_res_high _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.percent_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.R_factor_all 2.1521 2.098 674 172 0.238 8 0.17 . 20 . . . . 'X-RAY DIFFRACTION' . 2.2110 2.152 688 268 0.232 13 0.344 . 20 . . . . 'X-RAY DIFFRACTION' . 2.2749 2.211 658 345 0.185 21 0.312 . 20 . . . . 'X-RAY DIFFRACTION' . 2.3447 2.275 637 390 0.212 26 0.353 . 20 . . . . 'X-RAY DIFFRACTION' . 2.4214 2.345 623 480 0.219 30 0.317 . 20 . . . . 'X-RAY DIFFRACTION' . 2.5061 2.421 615 550 0.199 18 0.23 . 20 . . . . 'X-RAY DIFFRACTION' . 2.6004 2.506 587 553 0.204 32 0.37 . 20 . . . . 'X-RAY DIFFRACTION' . 2.7062 2.600 563 528 0.211 34 0.381 . 20 . . . . 'X-RAY DIFFRACTION' . 2.8261 2.706 551 528 0.216 23 0.422 . 20 . . . . 'X-RAY DIFFRACTION' . 2.9634 2.826 514 487 0.207 27 0.342 . 20 . . . . 'X-RAY DIFFRACTION' . 3.1230 2.963 486 464 0.203 22 0.253 . 20 . . . . 'X-RAY DIFFRACTION' . 3.3114 3.123 494 470 0.202 24 0.285 . 20 . . . . 'X-RAY DIFFRACTION' . 3.5387 3.311 433 414 0.196 19 0.255 . 20 . . . . 'X-RAY DIFFRACTION' . 3.8202 3.539 425 410 0.171 15 0.27 . 20 . . . . 'X-RAY DIFFRACTION' . 4.1818 3.820 380 363 0.18 17 0.238 . 20 . . . . 'X-RAY DIFFRACTION' . 4.6702 4.182 365 348 0.158 17 0.199 . 20 . . . . 'X-RAY DIFFRACTION' . 5.3830 4.670 316 305 0.167 11 0.237 . 20 . . . . 'X-RAY DIFFRACTION' . 6.5690 5.383 281 271 0.245 10 0.254 . 20 . . . . 'X-RAY DIFFRACTION' . 9.1913 6.569 220 208 0.22 12 0.319 . 20 . . . . 'X-RAY DIFFRACTION' . 44.7214 9.191 144 137 0.283 7 0.382 . 20 . . . . 'X-RAY DIFFRACTION' . # _struct.entry_id 1VJQ _struct.title ;Designed protein based on backbone conformation of procarboxypeptidase-A (1AYE) with sidechains chosen for maximal predicted stability. ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, DE NOVO PROTEIN' _struct_keywords.text ;STRUCTURAL GENOMICS, ENGINEERED PROTEIN, PSI, Protein Structure Initiative, Structural Genomics of Pathogenic Protozoa Consortium, SGPP, DE NOVO PROTEIN ; _struct_keywords.entry_id 1VJQ # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1VJQ _struct_ref.pdbx_db_accession 1VJQ _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1VJQ A 1 ? 79 ? 1VJQ 1 ? 79 ? 1 79 2 1 1VJQ B 1 ? 79 ? 1VJQ 1 ? 79 ? 1 79 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1480 ? 1 MORE -11 ? 1 'SSA (A^2)' 7940 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 10 ? LYS A 22 ? ASN A 10 LYS A 22 1 ? 13 HELX_P HELX_P2 2 PRO A 46 ? ASP A 48 ? PRO A 46 ASP A 48 5 ? 3 HELX_P HELX_P3 3 MSE A 49 ? LYS A 60 ? MSE A 49 LYS A 60 1 ? 12 HELX_P HELX_P4 4 ASN B 10 ? ALA B 21 ? ASN B 10 ALA B 21 1 ? 12 HELX_P HELX_P5 5 LYS B 22 ? ASN B 27 ? LYS B 22 ASN B 27 5 ? 6 HELX_P HELX_P6 6 PRO B 46 ? ASP B 48 ? PRO B 46 ASP B 48 5 ? 3 HELX_P HELX_P7 7 MSE B 49 ? GLY B 61 ? MSE B 49 GLY B 61 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASP 48 C ? ? ? 1_555 A MSE 49 N ? ? A ASP 48 A MSE 49 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale2 covale both ? A MSE 49 C ? ? ? 1_555 A VAL 50 N ? ? A MSE 49 A VAL 50 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale3 covale both ? A GLU 55 C ? ? ? 1_555 A MSE 56 N ? ? A GLU 55 A MSE 56 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale4 covale both ? A MSE 56 C ? ? ? 1_555 A LEU 57 N ? ? A MSE 56 A LEU 57 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale5 covale both ? B ASP 48 C ? ? ? 1_555 B MSE 49 N ? ? B ASP 48 B MSE 49 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale6 covale both ? B MSE 49 C ? ? ? 1_555 B VAL 50 N ? ? B MSE 49 B VAL 50 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale7 covale both ? B GLU 55 C ? ? ? 1_555 B MSE 56 N ? ? B GLU 55 B MSE 56 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale8 covale both ? B MSE 56 C ? ? ? 1_555 B LEU 57 N ? ? B MSE 56 B LEU 57 1_555 ? ? ? ? ? ? ? 1.325 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 29 ? TRP A 30 ? ASP A 29 TRP A 30 A 2 VAL A 41 ? ILE A 45 ? VAL A 41 ILE A 45 A 3 THR A 2 ? ILE A 6 ? THR A 2 ILE A 6 A 4 PHE A 64 ? GLY A 72 ? PHE A 64 GLY A 72 A 5 PHE B 64 ? GLU B 69 ? PHE B 64 GLU B 69 A 6 THR B 2 ? ILE B 6 ? THR B 2 ILE B 6 A 7 VAL B 41 ? ILE B 45 ? VAL B 41 ILE B 45 A 8 ASP B 29 ? TRP B 30 ? ASP B 29 TRP B 30 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASP A 29 ? N ASP A 29 O LEU A 44 ? O LEU A 44 A 2 3 O VAL A 41 ? O VAL A 41 N ILE A 6 ? N ILE A 6 A 3 4 N ILE A 3 ? N ILE A 3 O TYR A 67 ? O TYR A 67 A 4 5 N GLY A 71 ? N GLY A 71 O VAL B 66 ? O VAL B 66 A 5 6 O TYR B 67 ? O TYR B 67 N ILE B 3 ? N ILE B 3 A 6 7 N ILE B 6 ? N ILE B 6 O VAL B 41 ? O VAL B 41 A 7 8 O LEU B 44 ? O LEU B 44 N ASP B 29 ? N ASP B 29 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 27 ? ? 67.16 -3.10 2 1 THR A 35 ? ? -128.95 -76.03 3 1 THR B 35 ? ? -126.75 -72.18 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Structural Genomics of Pathogenic Protozoa Consortium' _pdbx_SG_project.initial_of_center SGPP # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 49 A MSE 49 ? MET SELENOMETHIONINE 2 A MSE 56 A MSE 56 ? MET SELENOMETHIONINE 3 B MSE 49 B MSE 49 ? MET SELENOMETHIONINE 4 B MSE 56 B MSE 56 ? MET SELENOMETHIONINE # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 . refined 34.2840 16.1800 33.9090 -0.0678 -0.0477 -0.0312 -0.0112 0.0266 -0.0094 0.4873 2.3596 4.2372 0.3681 0.6741 -2.1134 -0.0187 0.0086 0.0101 -0.0142 0.0501 0.1101 0.0732 0.0800 -0.0504 'X-RAY DIFFRACTION' 2 . refined 27.8220 14.5420 14.7810 -0.0524 -0.0498 -0.0288 0.0234 -0.0143 0.0076 2.0772 1.7858 1.3914 0.6172 0.3848 0.4839 0.0021 0.0109 -0.0130 0.0714 -0.0144 -0.0119 -0.0422 -0.0510 0.0386 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 1 A 73 ALL A 1 A 73 'X-RAY DIFFRACTION' ? 2 2 B 1 B 73 ALL B 1 B 73 'X-RAY DIFFRACTION' ? # loop_ _pdbx_phasing_MAD_set_site.id _pdbx_phasing_MAD_set_site.atom_type_symbol _pdbx_phasing_MAD_set_site.Cartn_x _pdbx_phasing_MAD_set_site.Cartn_y _pdbx_phasing_MAD_set_site.Cartn_z _pdbx_phasing_MAD_set_site.occupancy _pdbx_phasing_MAD_set_site.b_iso 1 SE 35.285 17.791 3.209 0.55 32.4 2 SE 36.357 16.060 6.552 0.54 36.6 3 SE 26.134 23.112 0.222 0.71 60.0 4 SE 25.924 14.199 4.814 0.51 52.1 # loop_ _pdbx_phasing_MAD_shell.d_res_low _pdbx_phasing_MAD_shell.d_res_high _pdbx_phasing_MAD_shell.reflns _pdbx_phasing_MAD_shell.fom 50.000 8.33 391 0.78 8.33 5.24 642 0.79 5.24 4.09 806 0.74 4.09 3.47 930 0.66 3.47 3.06 1049 0.53 3.06 2.77 1146 0.36 2.77 2.55 1174 0.25 2.55 2.37 931 0.12 # _pdbx_phasing_dm.entry_id 1VJQ _pdbx_phasing_dm.fom_acentric 0.70 _pdbx_phasing_dm.fom_centric 0.68 _pdbx_phasing_dm.fom 0.69 _pdbx_phasing_dm.reflns_acentric 5858 _pdbx_phasing_dm.reflns_centric 1212 _pdbx_phasing_dm.reflns 7070 # loop_ _pdbx_phasing_dm_shell.d_res_low _pdbx_phasing_dm_shell.d_res_high _pdbx_phasing_dm_shell.fom_acentric _pdbx_phasing_dm_shell.fom_centric _pdbx_phasing_dm_shell.fom _pdbx_phasing_dm_shell.reflns_acentric _pdbx_phasing_dm_shell.reflns_centric _pdbx_phasing_dm_shell.reflns 44.853 6.6 0.96 0.88 0.96 217 153 370 6.6 4.1 0.94 0.86 0.92 788 247 1035 4.1 3.3 0.89 0.78 0.87 1033 240 1273 3.3 2.9 0.77 0.70 0.76 1074 199 1273 2.9 2.5 0.56 0.45 0.54 1866 281 2147 2.5 2.3 0.40 0.34 0.39 880 92 972 # _phasing.method MAD # _phasing_MAD.entry_id 1VJQ _phasing_MAD.pdbx_d_res_high 2.300 _phasing_MAD.pdbx_d_res_low 50.000 _phasing_MAD.pdbx_reflns 7069 _phasing_MAD.pdbx_fom 0.48 # _phasing_MAD_clust.id 1 _phasing_MAD_clust.expt_id 1 _phasing_MAD_clust.number_set ? # _phasing_MAD_expt.id 1 _phasing_MAD_expt.mean_fom ? # loop_ _phasing_MAD_set.set_id _phasing_MAD_set.wavelength _phasing_MAD_set.pdbx_f_prime_refined _phasing_MAD_set.pdbx_f_double_prime_refined _phasing_MAD_set.expt_id _phasing_MAD_set.clust_id 1 0.9795 -7.10 8.20 1 1 2 0.9797 -12.40 3.00 1 1 3 0.9787 -5.20 5.20 1 1 # loop_ _phasing_set.id _phasing_set.pdbx_d_res_high _phasing_set.pdbx_d_res_low 1 . . 2 . . 3 . . # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE DESIGNED PROTEIN BASED ON PROCARBOXYPEPTIDASE-A BACKBONE (1AYE) WITH SIDECHAINS CHOSEN FOR MAXIMAL PREDICTED STABILITY. DESIGNED SEQUENCE TERMINATES AT GLU 70. RESIDUES 71-79 REMAIN AFTER CLEAVAGE FROM ORIGINAL FUSION PROTEIN. ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 74 ? A GLU 74 2 1 Y 1 A ASN 75 ? A ASN 75 3 1 Y 1 A LYS 76 ? A LYS 76 4 1 Y 1 A TYR 77 ? A TYR 77 5 1 Y 1 A PHE 78 ? A PHE 78 6 1 Y 1 A GLN 79 ? A GLN 79 7 1 Y 1 B GLU 74 ? B GLU 74 8 1 Y 1 B ASN 75 ? B ASN 75 9 1 Y 1 B LYS 76 ? B LYS 76 10 1 Y 1 B TYR 77 ? B TYR 77 11 1 Y 1 B PHE 78 ? B PHE 78 12 1 Y 1 B GLN 79 ? B GLN 79 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ASN N N N N 14 ASN CA C N S 15 ASN C C N N 16 ASN O O N N 17 ASN CB C N N 18 ASN CG C N N 19 ASN OD1 O N N 20 ASN ND2 N N N 21 ASN OXT O N N 22 ASN H H N N 23 ASN H2 H N N 24 ASN HA H N N 25 ASN HB2 H N N 26 ASN HB3 H N N 27 ASN HD21 H N N 28 ASN HD22 H N N 29 ASN HXT H N N 30 ASP N N N N 31 ASP CA C N S 32 ASP C C N N 33 ASP O O N N 34 ASP CB C N N 35 ASP CG C N N 36 ASP OD1 O N N 37 ASP OD2 O N N 38 ASP OXT O N N 39 ASP H H N N 40 ASP H2 H N N 41 ASP HA H N N 42 ASP HB2 H N N 43 ASP HB3 H N N 44 ASP HD2 H N N 45 ASP HXT H N N 46 GLN N N N N 47 GLN CA C N S 48 GLN C C N N 49 GLN O O N N 50 GLN CB C N N 51 GLN CG C N N 52 GLN CD C N N 53 GLN OE1 O N N 54 GLN NE2 N N N 55 GLN OXT O N N 56 GLN H H N N 57 GLN H2 H N N 58 GLN HA H N N 59 GLN HB2 H N N 60 GLN HB3 H N N 61 GLN HG2 H N N 62 GLN HG3 H N N 63 GLN HE21 H N N 64 GLN HE22 H N N 65 GLN HXT H N N 66 GLU N N N N 67 GLU CA C N S 68 GLU C C N N 69 GLU O O N N 70 GLU CB C N N 71 GLU CG C N N 72 GLU CD C N N 73 GLU OE1 O N N 74 GLU OE2 O N N 75 GLU OXT O N N 76 GLU H H N N 77 GLU H2 H N N 78 GLU HA H N N 79 GLU HB2 H N N 80 GLU HB3 H N N 81 GLU HG2 H N N 82 GLU HG3 H N N 83 GLU HE2 H N N 84 GLU HXT H N N 85 GLY N N N N 86 GLY CA C N N 87 GLY C C N N 88 GLY O O N N 89 GLY OXT O N N 90 GLY H H N N 91 GLY H2 H N N 92 GLY HA2 H N N 93 GLY HA3 H N N 94 GLY HXT H N N 95 HOH O O N N 96 HOH H1 H N N 97 HOH H2 H N N 98 ILE N N N N 99 ILE CA C N S 100 ILE C C N N 101 ILE O O N N 102 ILE CB C N S 103 ILE CG1 C N N 104 ILE CG2 C N N 105 ILE CD1 C N N 106 ILE OXT O N N 107 ILE H H N N 108 ILE H2 H N N 109 ILE HA H N N 110 ILE HB H N N 111 ILE HG12 H N N 112 ILE HG13 H N N 113 ILE HG21 H N N 114 ILE HG22 H N N 115 ILE HG23 H N N 116 ILE HD11 H N N 117 ILE HD12 H N N 118 ILE HD13 H N N 119 ILE HXT H N N 120 LEU N N N N 121 LEU CA C N S 122 LEU C C N N 123 LEU O O N N 124 LEU CB C N N 125 LEU CG C N N 126 LEU CD1 C N N 127 LEU CD2 C N N 128 LEU OXT O N N 129 LEU H H N N 130 LEU H2 H N N 131 LEU HA H N N 132 LEU HB2 H N N 133 LEU HB3 H N N 134 LEU HG H N N 135 LEU HD11 H N N 136 LEU HD12 H N N 137 LEU HD13 H N N 138 LEU HD21 H N N 139 LEU HD22 H N N 140 LEU HD23 H N N 141 LEU HXT H N N 142 LYS N N N N 143 LYS CA C N S 144 LYS C C N N 145 LYS O O N N 146 LYS CB C N N 147 LYS CG C N N 148 LYS CD C N N 149 LYS CE C N N 150 LYS NZ N N N 151 LYS OXT O N N 152 LYS H H N N 153 LYS H2 H N N 154 LYS HA H N N 155 LYS HB2 H N N 156 LYS HB3 H N N 157 LYS HG2 H N N 158 LYS HG3 H N N 159 LYS HD2 H N N 160 LYS HD3 H N N 161 LYS HE2 H N N 162 LYS HE3 H N N 163 LYS HZ1 H N N 164 LYS HZ2 H N N 165 LYS HZ3 H N N 166 LYS HXT H N N 167 MSE N N N N 168 MSE CA C N S 169 MSE C C N N 170 MSE O O N N 171 MSE OXT O N N 172 MSE CB C N N 173 MSE CG C N N 174 MSE SE SE N N 175 MSE CE C N N 176 MSE H H N N 177 MSE H2 H N N 178 MSE HA H N N 179 MSE HXT H N N 180 MSE HB2 H N N 181 MSE HB3 H N N 182 MSE HG2 H N N 183 MSE HG3 H N N 184 MSE HE1 H N N 185 MSE HE2 H N N 186 MSE HE3 H N N 187 PHE N N N N 188 PHE CA C N S 189 PHE C C N N 190 PHE O O N N 191 PHE CB C N N 192 PHE CG C Y N 193 PHE CD1 C Y N 194 PHE CD2 C Y N 195 PHE CE1 C Y N 196 PHE CE2 C Y N 197 PHE CZ C Y N 198 PHE OXT O N N 199 PHE H H N N 200 PHE H2 H N N 201 PHE HA H N N 202 PHE HB2 H N N 203 PHE HB3 H N N 204 PHE HD1 H N N 205 PHE HD2 H N N 206 PHE HE1 H N N 207 PHE HE2 H N N 208 PHE HZ H N N 209 PHE HXT H N N 210 PRO N N N N 211 PRO CA C N S 212 PRO C C N N 213 PRO O O N N 214 PRO CB C N N 215 PRO CG C N N 216 PRO CD C N N 217 PRO OXT O N N 218 PRO H H N N 219 PRO HA H N N 220 PRO HB2 H N N 221 PRO HB3 H N N 222 PRO HG2 H N N 223 PRO HG3 H N N 224 PRO HD2 H N N 225 PRO HD3 H N N 226 PRO HXT H N N 227 SER N N N N 228 SER CA C N S 229 SER C C N N 230 SER O O N N 231 SER CB C N N 232 SER OG O N N 233 SER OXT O N N 234 SER H H N N 235 SER H2 H N N 236 SER HA H N N 237 SER HB2 H N N 238 SER HB3 H N N 239 SER HG H N N 240 SER HXT H N N 241 THR N N N N 242 THR CA C N S 243 THR C C N N 244 THR O O N N 245 THR CB C N R 246 THR OG1 O N N 247 THR CG2 C N N 248 THR OXT O N N 249 THR H H N N 250 THR H2 H N N 251 THR HA H N N 252 THR HB H N N 253 THR HG1 H N N 254 THR HG21 H N N 255 THR HG22 H N N 256 THR HG23 H N N 257 THR HXT H N N 258 TRP N N N N 259 TRP CA C N S 260 TRP C C N N 261 TRP O O N N 262 TRP CB C N N 263 TRP CG C Y N 264 TRP CD1 C Y N 265 TRP CD2 C Y N 266 TRP NE1 N Y N 267 TRP CE2 C Y N 268 TRP CE3 C Y N 269 TRP CZ2 C Y N 270 TRP CZ3 C Y N 271 TRP CH2 C Y N 272 TRP OXT O N N 273 TRP H H N N 274 TRP H2 H N N 275 TRP HA H N N 276 TRP HB2 H N N 277 TRP HB3 H N N 278 TRP HD1 H N N 279 TRP HE1 H N N 280 TRP HE3 H N N 281 TRP HZ2 H N N 282 TRP HZ3 H N N 283 TRP HH2 H N N 284 TRP HXT H N N 285 TYR N N N N 286 TYR CA C N S 287 TYR C C N N 288 TYR O O N N 289 TYR CB C N N 290 TYR CG C Y N 291 TYR CD1 C Y N 292 TYR CD2 C Y N 293 TYR CE1 C Y N 294 TYR CE2 C Y N 295 TYR CZ C Y N 296 TYR OH O N N 297 TYR OXT O N N 298 TYR H H N N 299 TYR H2 H N N 300 TYR HA H N N 301 TYR HB2 H N N 302 TYR HB3 H N N 303 TYR HD1 H N N 304 TYR HD2 H N N 305 TYR HE1 H N N 306 TYR HE2 H N N 307 TYR HH H N N 308 TYR HXT H N N 309 VAL N N N N 310 VAL CA C N S 311 VAL C C N N 312 VAL O O N N 313 VAL CB C N N 314 VAL CG1 C N N 315 VAL CG2 C N N 316 VAL OXT O N N 317 VAL H H N N 318 VAL H2 H N N 319 VAL HA H N N 320 VAL HB H N N 321 VAL HG11 H N N 322 VAL HG12 H N N 323 VAL HG13 H N N 324 VAL HG21 H N N 325 VAL HG22 H N N 326 VAL HG23 H N N 327 VAL HXT H N N 328 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ASN N CA sing N N 13 ASN N H sing N N 14 ASN N H2 sing N N 15 ASN CA C sing N N 16 ASN CA CB sing N N 17 ASN CA HA sing N N 18 ASN C O doub N N 19 ASN C OXT sing N N 20 ASN CB CG sing N N 21 ASN CB HB2 sing N N 22 ASN CB HB3 sing N N 23 ASN CG OD1 doub N N 24 ASN CG ND2 sing N N 25 ASN ND2 HD21 sing N N 26 ASN ND2 HD22 sing N N 27 ASN OXT HXT sing N N 28 ASP N CA sing N N 29 ASP N H sing N N 30 ASP N H2 sing N N 31 ASP CA C sing N N 32 ASP CA CB sing N N 33 ASP CA HA sing N N 34 ASP C O doub N N 35 ASP C OXT sing N N 36 ASP CB CG sing N N 37 ASP CB HB2 sing N N 38 ASP CB HB3 sing N N 39 ASP CG OD1 doub N N 40 ASP CG OD2 sing N N 41 ASP OD2 HD2 sing N N 42 ASP OXT HXT sing N N 43 GLN N CA sing N N 44 GLN N H sing N N 45 GLN N H2 sing N N 46 GLN CA C sing N N 47 GLN CA CB sing N N 48 GLN CA HA sing N N 49 GLN C O doub N N 50 GLN C OXT sing N N 51 GLN CB CG sing N N 52 GLN CB HB2 sing N N 53 GLN CB HB3 sing N N 54 GLN CG CD sing N N 55 GLN CG HG2 sing N N 56 GLN CG HG3 sing N N 57 GLN CD OE1 doub N N 58 GLN CD NE2 sing N N 59 GLN NE2 HE21 sing N N 60 GLN NE2 HE22 sing N N 61 GLN OXT HXT sing N N 62 GLU N CA sing N N 63 GLU N H sing N N 64 GLU N H2 sing N N 65 GLU CA C sing N N 66 GLU CA CB sing N N 67 GLU CA HA sing N N 68 GLU C O doub N N 69 GLU C OXT sing N N 70 GLU CB CG sing N N 71 GLU CB HB2 sing N N 72 GLU CB HB3 sing N N 73 GLU CG CD sing N N 74 GLU CG HG2 sing N N 75 GLU CG HG3 sing N N 76 GLU CD OE1 doub N N 77 GLU CD OE2 sing N N 78 GLU OE2 HE2 sing N N 79 GLU OXT HXT sing N N 80 GLY N CA sing N N 81 GLY N H sing N N 82 GLY N H2 sing N N 83 GLY CA C sing N N 84 GLY CA HA2 sing N N 85 GLY CA HA3 sing N N 86 GLY C O doub N N 87 GLY C OXT sing N N 88 GLY OXT HXT sing N N 89 HOH O H1 sing N N 90 HOH O H2 sing N N 91 ILE N CA sing N N 92 ILE N H sing N N 93 ILE N H2 sing N N 94 ILE CA C sing N N 95 ILE CA CB sing N N 96 ILE CA HA sing N N 97 ILE C O doub N N 98 ILE C OXT sing N N 99 ILE CB CG1 sing N N 100 ILE CB CG2 sing N N 101 ILE CB HB sing N N 102 ILE CG1 CD1 sing N N 103 ILE CG1 HG12 sing N N 104 ILE CG1 HG13 sing N N 105 ILE CG2 HG21 sing N N 106 ILE CG2 HG22 sing N N 107 ILE CG2 HG23 sing N N 108 ILE CD1 HD11 sing N N 109 ILE CD1 HD12 sing N N 110 ILE CD1 HD13 sing N N 111 ILE OXT HXT sing N N 112 LEU N CA sing N N 113 LEU N H sing N N 114 LEU N H2 sing N N 115 LEU CA C sing N N 116 LEU CA CB sing N N 117 LEU CA HA sing N N 118 LEU C O doub N N 119 LEU C OXT sing N N 120 LEU CB CG sing N N 121 LEU CB HB2 sing N N 122 LEU CB HB3 sing N N 123 LEU CG CD1 sing N N 124 LEU CG CD2 sing N N 125 LEU CG HG sing N N 126 LEU CD1 HD11 sing N N 127 LEU CD1 HD12 sing N N 128 LEU CD1 HD13 sing N N 129 LEU CD2 HD21 sing N N 130 LEU CD2 HD22 sing N N 131 LEU CD2 HD23 sing N N 132 LEU OXT HXT sing N N 133 LYS N CA sing N N 134 LYS N H sing N N 135 LYS N H2 sing N N 136 LYS CA C sing N N 137 LYS CA CB sing N N 138 LYS CA HA sing N N 139 LYS C O doub N N 140 LYS C OXT sing N N 141 LYS CB CG sing N N 142 LYS CB HB2 sing N N 143 LYS CB HB3 sing N N 144 LYS CG CD sing N N 145 LYS CG HG2 sing N N 146 LYS CG HG3 sing N N 147 LYS CD CE sing N N 148 LYS CD HD2 sing N N 149 LYS CD HD3 sing N N 150 LYS CE NZ sing N N 151 LYS CE HE2 sing N N 152 LYS CE HE3 sing N N 153 LYS NZ HZ1 sing N N 154 LYS NZ HZ2 sing N N 155 LYS NZ HZ3 sing N N 156 LYS OXT HXT sing N N 157 MSE N CA sing N N 158 MSE N H sing N N 159 MSE N H2 sing N N 160 MSE CA C sing N N 161 MSE CA CB sing N N 162 MSE CA HA sing N N 163 MSE C O doub N N 164 MSE C OXT sing N N 165 MSE OXT HXT sing N N 166 MSE CB CG sing N N 167 MSE CB HB2 sing N N 168 MSE CB HB3 sing N N 169 MSE CG SE sing N N 170 MSE CG HG2 sing N N 171 MSE CG HG3 sing N N 172 MSE SE CE sing N N 173 MSE CE HE1 sing N N 174 MSE CE HE2 sing N N 175 MSE CE HE3 sing N N 176 PHE N CA sing N N 177 PHE N H sing N N 178 PHE N H2 sing N N 179 PHE CA C sing N N 180 PHE CA CB sing N N 181 PHE CA HA sing N N 182 PHE C O doub N N 183 PHE C OXT sing N N 184 PHE CB CG sing N N 185 PHE CB HB2 sing N N 186 PHE CB HB3 sing N N 187 PHE CG CD1 doub Y N 188 PHE CG CD2 sing Y N 189 PHE CD1 CE1 sing Y N 190 PHE CD1 HD1 sing N N 191 PHE CD2 CE2 doub Y N 192 PHE CD2 HD2 sing N N 193 PHE CE1 CZ doub Y N 194 PHE CE1 HE1 sing N N 195 PHE CE2 CZ sing Y N 196 PHE CE2 HE2 sing N N 197 PHE CZ HZ sing N N 198 PHE OXT HXT sing N N 199 PRO N CA sing N N 200 PRO N CD sing N N 201 PRO N H sing N N 202 PRO CA C sing N N 203 PRO CA CB sing N N 204 PRO CA HA sing N N 205 PRO C O doub N N 206 PRO C OXT sing N N 207 PRO CB CG sing N N 208 PRO CB HB2 sing N N 209 PRO CB HB3 sing N N 210 PRO CG CD sing N N 211 PRO CG HG2 sing N N 212 PRO CG HG3 sing N N 213 PRO CD HD2 sing N N 214 PRO CD HD3 sing N N 215 PRO OXT HXT sing N N 216 SER N CA sing N N 217 SER N H sing N N 218 SER N H2 sing N N 219 SER CA C sing N N 220 SER CA CB sing N N 221 SER CA HA sing N N 222 SER C O doub N N 223 SER C OXT sing N N 224 SER CB OG sing N N 225 SER CB HB2 sing N N 226 SER CB HB3 sing N N 227 SER OG HG sing N N 228 SER OXT HXT sing N N 229 THR N CA sing N N 230 THR N H sing N N 231 THR N H2 sing N N 232 THR CA C sing N N 233 THR CA CB sing N N 234 THR CA HA sing N N 235 THR C O doub N N 236 THR C OXT sing N N 237 THR CB OG1 sing N N 238 THR CB CG2 sing N N 239 THR CB HB sing N N 240 THR OG1 HG1 sing N N 241 THR CG2 HG21 sing N N 242 THR CG2 HG22 sing N N 243 THR CG2 HG23 sing N N 244 THR OXT HXT sing N N 245 TRP N CA sing N N 246 TRP N H sing N N 247 TRP N H2 sing N N 248 TRP CA C sing N N 249 TRP CA CB sing N N 250 TRP CA HA sing N N 251 TRP C O doub N N 252 TRP C OXT sing N N 253 TRP CB CG sing N N 254 TRP CB HB2 sing N N 255 TRP CB HB3 sing N N 256 TRP CG CD1 doub Y N 257 TRP CG CD2 sing Y N 258 TRP CD1 NE1 sing Y N 259 TRP CD1 HD1 sing N N 260 TRP CD2 CE2 doub Y N 261 TRP CD2 CE3 sing Y N 262 TRP NE1 CE2 sing Y N 263 TRP NE1 HE1 sing N N 264 TRP CE2 CZ2 sing Y N 265 TRP CE3 CZ3 doub Y N 266 TRP CE3 HE3 sing N N 267 TRP CZ2 CH2 doub Y N 268 TRP CZ2 HZ2 sing N N 269 TRP CZ3 CH2 sing Y N 270 TRP CZ3 HZ3 sing N N 271 TRP CH2 HH2 sing N N 272 TRP OXT HXT sing N N 273 TYR N CA sing N N 274 TYR N H sing N N 275 TYR N H2 sing N N 276 TYR CA C sing N N 277 TYR CA CB sing N N 278 TYR CA HA sing N N 279 TYR C O doub N N 280 TYR C OXT sing N N 281 TYR CB CG sing N N 282 TYR CB HB2 sing N N 283 TYR CB HB3 sing N N 284 TYR CG CD1 doub Y N 285 TYR CG CD2 sing Y N 286 TYR CD1 CE1 sing Y N 287 TYR CD1 HD1 sing N N 288 TYR CD2 CE2 doub Y N 289 TYR CD2 HD2 sing N N 290 TYR CE1 CZ doub Y N 291 TYR CE1 HE1 sing N N 292 TYR CE2 CZ sing Y N 293 TYR CE2 HE2 sing N N 294 TYR CZ OH sing N N 295 TYR OH HH sing N N 296 TYR OXT HXT sing N N 297 VAL N CA sing N N 298 VAL N H sing N N 299 VAL N H2 sing N N 300 VAL CA C sing N N 301 VAL CA CB sing N N 302 VAL CA HA sing N N 303 VAL C O doub N N 304 VAL C OXT sing N N 305 VAL CB CG1 sing N N 306 VAL CB CG2 sing N N 307 VAL CB HB sing N N 308 VAL CG1 HG11 sing N N 309 VAL CG1 HG12 sing N N 310 VAL CG1 HG13 sing N N 311 VAL CG2 HG21 sing N N 312 VAL CG2 HG22 sing N N 313 VAL CG2 HG23 sing N N 314 VAL OXT HXT sing N N 315 # _atom_sites.entry_id 1VJQ _atom_sites.fract_transf_matrix[1][1] 0.016276 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015375 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025510 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_