HEADER TRANSFERASE 07-MAY-04 1VKB TITLE CRYSTAL STRUCTURE OF AN AIG2-LIKE PROTEIN (A2LD1, GGACT, MGC7867) FROM TITLE 2 MUS MUSCULUS AT 1.90 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS GAMMA-GLUTAMYL CYCLOTRANSFERASE-LIKE FOLD, STRUCTURAL GENOMICS, JOINT KEYWDS 2 CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, KEYWDS 3 PSI, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 9 25-JAN-23 1VKB 1 REMARK SEQADV REVDAT 8 04-OCT-17 1VKB 1 REMARK REVDAT 7 13-JUL-11 1VKB 1 VERSN REVDAT 6 23-MAR-11 1VKB 1 HEADER TITLE KEYWDS REVDAT 5 24-FEB-09 1VKB 1 VERSN REVDAT 4 03-OCT-06 1VKB 1 JRNL REVDAT 3 28-MAR-06 1VKB 1 JRNL REVDAT 2 18-JAN-05 1VKB 1 AUTHOR KEYWDS REMARK REVDAT 1 18-MAY-04 1VKB 0 JRNL AUTH H.E.KLOCK,R.SCHWARZENBACHER,Q.XU,D.MCMULLAN,P.ABDUBEK, JRNL AUTH 2 E.AMBING,H.AXELROD,T.BIORAC,J.M.CANAVES,H.J.CHIU,A.M.DEACON, JRNL AUTH 3 M.DIDONATO,M.A.ELSLIGER,A.GODZIK,C.GRITTINI,S.K.GRZECHNIK, JRNL AUTH 4 J.HALE,E.HAMPTON,G.W.HAN,J.HAUGEN,M.HORNSBY,L.JAROSZEWSKI, JRNL AUTH 5 E.KOESEMA,A.KREUSCH,P.KUHN,M.D.MILLER,K.MOY,E.NIGOGHOSSIAN, JRNL AUTH 6 J.PAULSEN,K.QUIJANO,R.REYES,C.RIFE,E.SIMS,G.SPRAGGON, JRNL AUTH 7 R.C.STEVENS,H.VAN DEN BEDEM,J.VELASQUEZ,J.VINCENT,A.WHITE, JRNL AUTH 8 G.WOLF,K.O.HODGSON,J.WOOLEY,S.A.LESLEY,I.A.WILSON JRNL TITL CRYSTAL STRUCTURE OF A CONSERVED HYPOTHETICAL PROTEIN (GI: JRNL TITL 2 13879369) FROM MOUSE AT 1.90 A RESOLUTION REVEALS A NEW JRNL TITL 3 FOLD. JRNL REF PROTEINS V. 61 1132 2005 JRNL REFN ISSN 0887-3585 JRNL PMID 16224779 JRNL DOI 10.1002/PROT.20610 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0001 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.87 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 13625 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.136 REMARK 3 R VALUE (WORKING SET) : 0.134 REMARK 3 FREE R VALUE : 0.171 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 720 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1036 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1050 REMARK 3 BIN FREE R VALUE SET COUNT : 43 REMARK 3 BIN FREE R VALUE : 0.1880 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1188 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 9 REMARK 3 SOLVENT ATOMS : 108 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 26.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.15000 REMARK 3 B22 (A**2) : 0.15000 REMARK 3 B33 (A**2) : -0.22000 REMARK 3 B12 (A**2) : 0.07000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.104 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.103 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.059 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.733 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1258 ; 0.015 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1075 ; 0.008 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1708 ; 1.605 ; 1.924 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2507 ; 0.941 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 145 ; 6.264 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 64 ;30.633 ;23.438 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 195 ;11.468 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;13.450 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 178 ; 0.109 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1388 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 268 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 207 ; 0.199 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1053 ; 0.190 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 680 ; 0.084 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 88 ; 0.156 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 12 ; 0.166 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 46 ; 0.237 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.259 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 761 ; 2.227 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 301 ; 0.634 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1207 ; 3.168 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 567 ; 4.950 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 501 ; 6.652 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -1 A 149 REMARK 3 ORIGIN FOR THE GROUP (A): 26.4660 26.0700 -0.0840 REMARK 3 T TENSOR REMARK 3 T11: -0.0332 T22: -0.0305 REMARK 3 T33: -0.0198 T12: 0.0110 REMARK 3 T13: 0.0061 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 0.7270 L22: 1.3781 REMARK 3 L33: 0.9496 L12: -0.1209 REMARK 3 L13: -0.0688 L23: 0.5684 REMARK 3 S TENSOR REMARK 3 S11: -0.0430 S12: -0.0205 S13: -0.0447 REMARK 3 S21: 0.0076 S22: 0.0064 S23: 0.0671 REMARK 3 S31: 0.0852 S32: -0.0009 S33: 0.0366 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1). HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS 2). SS BOND BETWEEN CYS 35 AND CYS 62 IS REMARK 3 MODELLED AS HALF OCCUPANCY. REMARK 4 REMARK 4 1VKB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-MAY-04. REMARK 100 THE DEPOSITION ID IS D_1000001945. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-NOV-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.742575 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14364 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 60.45 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04800 REMARK 200 FOR THE DATA SET : 86.2100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 0.78 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.12200 REMARK 200 FOR SHELL : 27.43 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSHARP, SOLOMON, SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4.1 ACETATE, 2.4 NAFORMATE, VAPOR REMARK 280 DIFFUSION,SITTING DROP,NANODROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.57200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 14.28600 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 21.42900 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 7.14300 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 35.71500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 ASP A -8 REMARK 465 LYS A -7 REMARK 465 ILE A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 GLY A 102 REMARK 465 ASP A 103 REMARK 465 GLY A 104 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A -1 CG ND1 CD2 CE1 NE2 REMARK 470 LEU A 27 CD1 CD2 REMARK 470 ASP A 105 N CA CB CG OD1 OD2 REMARK 470 GLU A 147 OE1 OE2 REMARK 470 ARG A 149 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 134 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 1 -169.58 -123.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 150 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 151 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 152 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 354528 RELATED DB: TARGETDB DBREF 1VKB A 1 149 UNP Q923B0 Q923B0_MOUSE 1 149 SEQADV 1VKB MET A -11 UNP Q923B0 EXPRESSION TAG SEQADV 1VKB GLY A -10 UNP Q923B0 EXPRESSION TAG SEQADV 1VKB SER A -9 UNP Q923B0 EXPRESSION TAG SEQADV 1VKB ASP A -8 UNP Q923B0 EXPRESSION TAG SEQADV 1VKB LYS A -7 UNP Q923B0 EXPRESSION TAG SEQADV 1VKB ILE A -6 UNP Q923B0 EXPRESSION TAG SEQADV 1VKB HIS A -5 UNP Q923B0 EXPRESSION TAG SEQADV 1VKB HIS A -4 UNP Q923B0 EXPRESSION TAG SEQADV 1VKB HIS A -3 UNP Q923B0 EXPRESSION TAG SEQADV 1VKB HIS A -2 UNP Q923B0 EXPRESSION TAG SEQADV 1VKB HIS A -1 UNP Q923B0 EXPRESSION TAG SEQADV 1VKB HIS A 0 UNP Q923B0 EXPRESSION TAG SEQRES 1 A 161 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MET SEQRES 2 A 161 ALA HIS ILE PHE VAL TYR GLY THR LEU LYS ARG GLY GLN SEQRES 3 A 161 PRO ASN HIS LYS VAL MET LEU ASP HIS SER HIS GLY LEU SEQRES 4 A 161 ALA ALA PHE ARG GLY ARG GLY CYS THR VAL GLU SER PHE SEQRES 5 A 161 PRO LEU VAL ILE ALA GLY GLU HIS ASN ILE PRO TRP LEU SEQRES 6 A 161 LEU TYR LEU PRO GLY LYS GLY HIS CYS VAL THR GLY GLU SEQRES 7 A 161 ILE TYR GLU VAL ASP GLU GLN MET LEU ARG PHE LEU ASP SEQRES 8 A 161 ASP PHE GLU ASP CYS PRO SER MET TYR GLN ARG THR ALA SEQRES 9 A 161 LEU GLN VAL GLN VAL LEU GLU TRP GLU GLY ASP GLY ASP SEQRES 10 A 161 PRO GLY ASP SER VAL GLN CYS PHE VAL TYR THR THR ALA SEQRES 11 A 161 THR TYR ALA PRO GLU TRP LEU PHE LEU PRO TYR HIS GLU SEQRES 12 A 161 SER TYR ASP SER GLU GLY PRO HIS GLY LEU ARG TYR ASN SEQRES 13 A 161 PRO ARG GLU ASN ARG HET FMT A 150 3 HET FMT A 151 3 HET FMT A 152 3 HETNAM FMT FORMIC ACID FORMUL 2 FMT 3(C H2 O2) FORMUL 5 HOH *108(H2 O) HELIX 1 1 HIS A 17 ASP A 22 1 6 HELIX 2 2 HIS A 23 GLY A 26 5 4 HELIX 3 3 ASP A 71 GLU A 82 1 12 HELIX 4 4 ALA A 121 LEU A 127 5 7 SHEET 1 A 8 LEU A 42 ALA A 45 0 SHEET 2 A 8 ILE A 50 LEU A 54 -1 O TRP A 52 N VAL A 43 SHEET 3 A 8 SER A 109 THR A 117 1 O THR A 117 N LEU A 53 SHEET 4 A 8 GLN A 89 TRP A 100 -1 N THR A 91 O VAL A 114 SHEET 5 A 8 ALA A 28 THR A 36 -1 N CYS A 35 O GLN A 96 SHEET 6 A 8 THR A 64 VAL A 70 -1 O ILE A 67 N ARG A 31 SHEET 7 A 8 ALA A 2 VAL A 6 -1 N ALA A 2 O VAL A 70 SHEET 8 A 8 SER A 109 THR A 117 1 O PHE A 113 N PHE A 5 SSBOND 1 CYS A 35 CYS A 62 1555 1555 2.06 CISPEP 1 CYS A 84 PRO A 85 0 1.75 SITE 1 AC1 5 ASN A 16 GLU A 82 TYR A 143 ARG A 146 SITE 2 AC1 5 HOH A 164 SITE 1 AC2 7 VAL A 6 TYR A 7 GLY A 8 THR A 9 SITE 2 AC2 7 LEU A 10 HOH A 154 HOH A 167 SITE 1 AC3 4 ARG A 12 HIS A 17 LEU A 21 HOH A 193 CRYST1 85.745 85.745 42.858 90.00 90.00 120.00 P 65 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011662 0.006733 0.000000 0.00000 SCALE2 0.000000 0.013467 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023333 0.00000