HEADER UNKNOWN FUNCTION 16-NOV-04 1VPQ TITLE CRYSTAL STRUCTURE OF A DUF72 FAMILY PROTEIN (TM1631) FROM THERMOTOGA TITLE 2 MARITIMA MSB8 AT 2.20 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN TM1631; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 243274; SOURCE 4 STRAIN: MSB8; SOURCE 5 GENE: TM1631; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 25-JAN-23 1VPQ 1 REMARK SEQADV REVDAT 5 13-JUL-11 1VPQ 1 VERSN REVDAT 4 28-JUL-10 1VPQ 1 HEADER TITLE KEYWDS REVDAT 3 24-FEB-09 1VPQ 1 VERSN REVDAT 2 29-MAR-05 1VPQ 1 REMARK REVDAT 1 23-NOV-04 1VPQ 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF HYPOTHETICAL PROTEIN (TM1631) FROM JRNL TITL 2 THERMOTOGA MARITIMA AT 2.20 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.63 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 87.6 REMARK 3 NUMBER OF REFLECTIONS : 12722 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 656 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 697 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 66.91 REMARK 3 BIN R VALUE (WORKING SET) : 0.3510 REMARK 3 BIN FREE R VALUE SET COUNT : 37 REMARK 3 BIN FREE R VALUE : 0.4660 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2180 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 91 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 37.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.77000 REMARK 3 B22 (A**2) : -2.85000 REMARK 3 B33 (A**2) : -0.92000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.386 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.260 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.228 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.974 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2270 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1940 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3088 ; 1.050 ; 1.944 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4493 ; 0.739 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 259 ; 5.854 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 119 ;31.379 ;23.445 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 353 ;14.154 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;19.712 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 313 ; 0.060 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2514 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 531 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 433 ; 0.189 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1967 ; 0.186 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1093 ; 0.189 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1104 ; 0.082 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 95 ; 0.173 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 19 ; 0.152 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 58 ; 0.173 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.303 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1399 ; 0.526 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 519 ; 0.054 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2113 ; 0.604 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1107 ; 0.896 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 975 ; 1.302 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 59 REMARK 3 ORIGIN FOR THE GROUP (A): 16.8550 11.4400 6.6220 REMARK 3 T TENSOR REMARK 3 T11: -0.0145 T22: 0.0031 REMARK 3 T33: 0.0211 T12: 0.0415 REMARK 3 T13: 0.0369 T23: 0.0394 REMARK 3 L TENSOR REMARK 3 L11: 1.4689 L22: 6.2529 REMARK 3 L33: 3.0614 L12: 1.2279 REMARK 3 L13: 0.1853 L23: 1.3399 REMARK 3 S TENSOR REMARK 3 S11: -0.0194 S12: -0.2910 S13: -0.0346 REMARK 3 S21: 0.7462 S22: -0.0935 S23: 0.4829 REMARK 3 S31: -0.2740 S32: -0.3680 S33: 0.1129 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 60 A 259 REMARK 3 ORIGIN FOR THE GROUP (A): 26.0160 23.1690 -4.0450 REMARK 3 T TENSOR REMARK 3 T11: -0.2049 T22: -0.0713 REMARK 3 T33: -0.1103 T12: 0.0000 REMARK 3 T13: 0.0072 T23: 0.0219 REMARK 3 L TENSOR REMARK 3 L11: 1.4059 L22: 3.1227 REMARK 3 L33: 1.7808 L12: -0.1482 REMARK 3 L13: 0.0987 L23: -0.0221 REMARK 3 S TENSOR REMARK 3 S11: -0.0036 S12: -0.1490 S13: -0.0588 REMARK 3 S21: 0.1898 S22: 0.0229 S23: 0.0343 REMARK 3 S31: 0.0216 S32: -0.0318 S33: -0.0193 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1).HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS 2).A SO4 ANION IS LOCATED AT THE TWO-FOLD REMARK 3 CRYSTALLOGRAPHIC SYMMETRY AXIS AT THE INTERFACE BETWEEN TWO REMARK 3 MONOMERS. THE S AND O ATOMS ON THESE RESIDUES WERE MODELED WITH REMARK 3 OCCUPANCIES OF 0.50. REMARK 4 REMARK 4 1VPQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-NOV-04. REMARK 100 THE DEPOSITION ID IS D_1000002043. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-FEB-02; 15-NOV-03 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SSRL; APS REMARK 200 BEAMLINE : BL11-1; 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033169; 0.98036, 0.98014, REMARK 200 0.96427 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(311) BENT REMARK 200 MONOCHROMATOR; ROSENBAUM-ROCK REMARK 200 DOUBLE-CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : FLAT MIRROR; ROSENBAUM-ROCK REMARK 200 VERTICAL FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315; APS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 4.2), CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13378 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 49.630 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.4 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 67.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.40000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD + MOLECULAR REMARK 200 REPLACEMENT REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: DATA FROM A SE-MET CONTAINING CRYSTAL IN SPACEGROUP P32 REMARK 200 WAS USED FOR THE MAD PHASING EXPERIMENTS AT 2.8 ANGSTROMS REMARK 200 RESOLUTION. THIS MAD STRUCTURE WAS USED AS A MOLECULAR REMARK 200 REPLACEMENT MODEL TO PHASE THE STRUCTURE AT A RESOLUTION OF 2.2 REMARK 200 ANGSTROMS IN THE C222(1) SPACEGROUP. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.26M (NH4)2SO4, 0.2M NACL 0.1M CHES REMARK 280 PH9.5 , VAPOR DIFFUSION,SITTING DROP,NANODROP, TEMPERATURE 277K. REMARK 280 0.2M K3CITRATE, 20.0% PEG-3350, NO BUFFER PH 8.3, VAPOR REMARK 280 DIFFUSION,SITTING DROP,NANODROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.23050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.23050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 26.64300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 68.11900 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 26.64300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 68.11900 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.23050 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 26.64300 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 68.11900 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 40.23050 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 26.64300 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 68.11900 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 3060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -115.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 53.28600 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -40.23050 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A 264 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 305 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 ASP A -8 REMARK 465 LYS A -7 REMARK 465 ILE A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 ARG A 260 REMARK 465 VAL A 261 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 15 NZ REMARK 470 LYS A 24 CD CE NZ REMARK 470 GLN A 27 CG CD OE1 NE2 REMARK 470 ARG A 54 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 61 CD NE CZ NH1 NH2 REMARK 470 LYS A 62 CE NZ REMARK 470 LYS A 89 CG CD CE NZ REMARK 470 ARG A 97 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 124 CG CD CE NZ REMARK 470 ARG A 198 NE CZ NH1 NH2 REMARK 470 GLU A 214 CG CD OE1 OE2 REMARK 470 LYS A 218 CG CD CE NZ REMARK 470 GLU A 222 CG CD OE1 OE2 REMARK 470 GLU A 226 CG CD OE1 OE2 REMARK 470 ARG A 229 NE CZ NH1 NH2 REMARK 470 ARG A 230 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OH TYR A 47 OE1 GLU A 156 8455 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 13 -38.52 -36.22 REMARK 500 VAL A 17 -78.53 -131.08 REMARK 500 VAL A 35 -61.61 -104.81 REMARK 500 ASP A 66 39.65 -92.70 REMARK 500 VAL A 80 -64.30 -130.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 262 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 263 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 264 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 283488 RELATED DB: TARGETDB DBREF 1VPQ A 1 261 UNP Q9X1W6 Q9X1W6_THEMA 1 261 SEQADV 1VPQ MET A -11 UNP Q9X1W6 EXPRESSION TAG SEQADV 1VPQ GLY A -10 UNP Q9X1W6 EXPRESSION TAG SEQADV 1VPQ SER A -9 UNP Q9X1W6 EXPRESSION TAG SEQADV 1VPQ ASP A -8 UNP Q9X1W6 EXPRESSION TAG SEQADV 1VPQ LYS A -7 UNP Q9X1W6 EXPRESSION TAG SEQADV 1VPQ ILE A -6 UNP Q9X1W6 EXPRESSION TAG SEQADV 1VPQ HIS A -5 UNP Q9X1W6 EXPRESSION TAG SEQADV 1VPQ HIS A -4 UNP Q9X1W6 EXPRESSION TAG SEQADV 1VPQ HIS A -3 UNP Q9X1W6 EXPRESSION TAG SEQADV 1VPQ HIS A -2 UNP Q9X1W6 EXPRESSION TAG SEQADV 1VPQ HIS A -1 UNP Q9X1W6 EXPRESSION TAG SEQADV 1VPQ HIS A 0 UNP Q9X1W6 EXPRESSION TAG SEQRES 1 A 273 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MET SEQRES 2 A 273 VAL TYR VAL GLY THR SER GLY PHE SER PHE GLU ASP TRP SEQRES 3 A 273 LYS GLY VAL VAL TYR PRO GLU HIS LEU LYS PRO SER GLN SEQRES 4 A 273 PHE LEU LYS TYR TYR TRP ALA VAL LEU GLY PHE ARG ILE SEQRES 5 A 273 VAL GLU LEU ASN PHE THR TYR TYR THR GLN PRO SER TRP SEQRES 6 A 273 ARG SER PHE VAL GLN MET LEU ARG LYS THR PRO PRO ASP SEQRES 7 A 273 PHE TYR PHE THR VAL LYS THR PRO GLY SER VAL THR HIS SEQRES 8 A 273 VAL LEU TRP LYS GLU GLY LYS ASP PRO LYS GLU ASP MET SEQRES 9 A 273 GLU ASN PHE THR ARG GLN ILE GLU PRO LEU ILE GLU GLU SEQRES 10 A 273 GLN ARG LEU LYS MET THR LEU ALA GLN PHE PRO PHE SER SEQRES 11 A 273 PHE LYS PHE SER ARG LYS ASN VAL GLU TYR LEU GLU LYS SEQRES 12 A 273 LEU ARG GLU SER TYR PRO TYR GLU LEU ALA VAL GLU PHE SEQRES 13 A 273 ARG HIS TYR SER TRP ASP ARG GLU GLU THR TYR GLU PHE SEQRES 14 A 273 LEU ARG ASN HIS GLY ILE THR PHE VAL VAL VAL ASP GLU SEQRES 15 A 273 PRO LYS LEU PRO GLY LEU PHE PRO TYR ARG PRO ILE THR SEQRES 16 A 273 THR THR ASP TYR ALA TYR PHE ARG PHE HIS GLY ARG ASN SEQRES 17 A 273 GLU ARG TRP PHE GLU ALA GLU GLY GLU GLU ARG TYR ASP SEQRES 18 A 273 TYR LEU TYR SER GLU GLU GLU LEU LYS THR LEU PHE GLU SEQRES 19 A 273 ASP VAL VAL GLU LEU SER ARG ARG VAL LYS GLU THR TYR SEQRES 20 A 273 VAL PHE PHE ASN ASN CYS TYR LYS GLY GLN ALA ALA ILE SEQRES 21 A 273 ASN ALA LEU GLN PHE LYS LYS MET LEU GLU GLU ARG VAL HET SO4 A 262 5 HET SO4 A 263 5 HET SO4 A 264 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 3(O4 S 2-) FORMUL 5 HOH *91(H2 O) HELIX 1 1 LYS A 24 SER A 26 5 3 HELIX 2 2 GLN A 27 VAL A 35 1 9 HELIX 3 3 SER A 52 ARG A 61 1 10 HELIX 4 4 PRO A 74 VAL A 80 1 7 HELIX 5 5 VAL A 80 GLY A 85 1 6 HELIX 6 6 PRO A 88 GLU A 105 1 18 HELIX 7 7 SER A 122 TYR A 136 1 15 HELIX 8 8 HIS A 146 ASP A 150 5 5 HELIX 9 9 ARG A 151 HIS A 161 1 11 HELIX 10 10 GLU A 203 ARG A 207 5 5 HELIX 11 11 SER A 213 ARG A 229 1 17 HELIX 12 12 CYS A 241 LYS A 243 5 3 HELIX 13 13 GLY A 244 GLU A 259 1 16 SHEET 1 A 8 MET A 1 THR A 6 0 SHEET 2 A 8 GLU A 233 PHE A 238 1 O THR A 234 N TYR A 3 SHEET 3 A 8 TYR A 187 PHE A 192 1 N PHE A 190 O TYR A 235 SHEET 4 A 8 THR A 164 ASP A 169 1 N VAL A 167 O TYR A 189 SHEET 5 A 8 LEU A 140 GLU A 143 1 N LEU A 140 O THR A 164 SHEET 6 A 8 LEU A 108 GLN A 114 1 N ALA A 113 O ALA A 141 SHEET 7 A 8 TYR A 68 LYS A 72 1 N VAL A 71 O LEU A 112 SHEET 8 A 8 ILE A 40 LEU A 43 1 N LEU A 43 O THR A 70 CISPEP 1 GLN A 50 PRO A 51 0 2.56 SITE 1 AC1 7 LYS A 72 GLN A 114 ARG A 145 ARG A 191 SITE 2 AC1 7 HIS A 193 TYR A 208 ASN A 239 SITE 1 AC2 6 PRO A 116 PHE A 117 ARG A 145 ARG A 207 SITE 2 AC2 6 HOH A 266 HOH A 310 SITE 1 AC3 4 LYS A 172 PRO A 178 TYR A 179 ARG A 180 CRYST1 53.286 136.238 80.461 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018767 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007340 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012428 0.00000