data_1VPW # _entry.id 1VPW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1VPW pdb_00001vpw 10.2210/pdb1vpw/pdb RCSB PDT063 ? ? WWPDB D_1000177093 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-06-17 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-02-15 5 'Structure model' 1 4 2021-11-03 6 'Structure model' 1 5 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Source and taxonomy' 4 4 'Structure model' 'Structure summary' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 6 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' database_2 2 5 'Structure model' struct_ref_seq_dif 3 5 'Structure model' struct_site 4 6 'Structure model' chem_comp_atom 5 6 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_ref_seq_dif.details' 4 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1VPW _pdbx_database_status.recvd_initial_deposition_date 1998-02-27 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site NDB _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Arvidson, D.N.' 1 'Lu, F.' 2 'Faber, C.' 3 'Zalkin, H.' 4 'Brennan, R.G.' 5 # _citation.id primary _citation.title 'The structure of PurR mutant L54M shows an alternative route to DNA kinking.' _citation.journal_abbrev Nat.Struct.Biol. _citation.journal_volume 5 _citation.page_first 436 _citation.page_last 441 _citation.year 1998 _citation.journal_id_ASTM NSBIEW _citation.country US _citation.journal_id_ISSN 1072-8368 _citation.journal_id_CSD 2024 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9628480 _citation.pdbx_database_id_DOI 10.1038/nsb0698-436 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Arvidson, D.N.' 1 ? primary 'Lu, F.' 2 ? primary 'Faber, C.' 3 ? primary 'Zalkin, H.' 4 ? primary 'Brennan, R.G.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*TP*AP*CP*GP*CP*AP*AP*AP*CP*GP*TP*TP*TP*GP*CP*GP*T )-3') ; 5202.384 1 ? ? ? ? 2 polymer man 'PURINE REPRESSOR' 38109.633 1 ? L54M ? ? 3 non-polymer syn HYPOXANTHINE 136.111 1 ? ? ? ? 4 water nat water 18.015 50 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PURF OPERATOR' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DA)(DC)(DG)(DC)(DA)(DA)(DA)(DC)(DG)(DT)(DT)(DT)(DG)(DC)(DG)(DT)' TACGCAAACGTTTGCGT B ? 2 'polypeptide(L)' no no ;ATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSMKVNHTKSIGLLATSSEAAYFAEIIEAV EKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDN AFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPT AVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEV HPRLIERRSVADGPFRDYRR ; ;ATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSMKVNHTKSIGLLATSSEAAYFAEIIEAV EKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDN AFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPT AVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEV HPRLIERRSVADGPFRDYRR ; A ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 HYPOXANTHINE HPA 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DA n 1 3 DC n 1 4 DG n 1 5 DC n 1 6 DA n 1 7 DA n 1 8 DA n 1 9 DC n 1 10 DG n 1 11 DT n 1 12 DT n 1 13 DT n 1 14 DG n 1 15 DC n 1 16 DG n 1 17 DT n 2 1 ALA n 2 2 THR n 2 3 ILE n 2 4 LYS n 2 5 ASP n 2 6 VAL n 2 7 ALA n 2 8 LYS n 2 9 ARG n 2 10 ALA n 2 11 ASN n 2 12 VAL n 2 13 SER n 2 14 THR n 2 15 THR n 2 16 THR n 2 17 VAL n 2 18 SER n 2 19 HIS n 2 20 VAL n 2 21 ILE n 2 22 ASN n 2 23 LYS n 2 24 THR n 2 25 ARG n 2 26 PHE n 2 27 VAL n 2 28 ALA n 2 29 GLU n 2 30 GLU n 2 31 THR n 2 32 ARG n 2 33 ASN n 2 34 ALA n 2 35 VAL n 2 36 TRP n 2 37 ALA n 2 38 ALA n 2 39 ILE n 2 40 LYS n 2 41 GLU n 2 42 LEU n 2 43 HIS n 2 44 TYR n 2 45 SER n 2 46 PRO n 2 47 SER n 2 48 ALA n 2 49 VAL n 2 50 ALA n 2 51 ARG n 2 52 SER n 2 53 MET n 2 54 LYS n 2 55 VAL n 2 56 ASN n 2 57 HIS n 2 58 THR n 2 59 LYS n 2 60 SER n 2 61 ILE n 2 62 GLY n 2 63 LEU n 2 64 LEU n 2 65 ALA n 2 66 THR n 2 67 SER n 2 68 SER n 2 69 GLU n 2 70 ALA n 2 71 ALA n 2 72 TYR n 2 73 PHE n 2 74 ALA n 2 75 GLU n 2 76 ILE n 2 77 ILE n 2 78 GLU n 2 79 ALA n 2 80 VAL n 2 81 GLU n 2 82 LYS n 2 83 ASN n 2 84 CYS n 2 85 PHE n 2 86 GLN n 2 87 LYS n 2 88 GLY n 2 89 TYR n 2 90 THR n 2 91 LEU n 2 92 ILE n 2 93 LEU n 2 94 GLY n 2 95 ASN n 2 96 ALA n 2 97 TRP n 2 98 ASN n 2 99 ASN n 2 100 LEU n 2 101 GLU n 2 102 LYS n 2 103 GLN n 2 104 ARG n 2 105 ALA n 2 106 TYR n 2 107 LEU n 2 108 SER n 2 109 MET n 2 110 MET n 2 111 ALA n 2 112 GLN n 2 113 LYS n 2 114 ARG n 2 115 VAL n 2 116 ASP n 2 117 GLY n 2 118 LEU n 2 119 LEU n 2 120 VAL n 2 121 MET n 2 122 CYS n 2 123 SER n 2 124 GLU n 2 125 TYR n 2 126 PRO n 2 127 GLU n 2 128 PRO n 2 129 LEU n 2 130 LEU n 2 131 ALA n 2 132 MET n 2 133 LEU n 2 134 GLU n 2 135 GLU n 2 136 TYR n 2 137 ARG n 2 138 HIS n 2 139 ILE n 2 140 PRO n 2 141 MET n 2 142 VAL n 2 143 VAL n 2 144 MET n 2 145 ASP n 2 146 TRP n 2 147 GLY n 2 148 GLU n 2 149 ALA n 2 150 LYS n 2 151 ALA n 2 152 ASP n 2 153 PHE n 2 154 THR n 2 155 ASP n 2 156 ALA n 2 157 VAL n 2 158 ILE n 2 159 ASP n 2 160 ASN n 2 161 ALA n 2 162 PHE n 2 163 GLU n 2 164 GLY n 2 165 GLY n 2 166 TYR n 2 167 MET n 2 168 ALA n 2 169 GLY n 2 170 ARG n 2 171 TYR n 2 172 LEU n 2 173 ILE n 2 174 GLU n 2 175 ARG n 2 176 GLY n 2 177 HIS n 2 178 ARG n 2 179 GLU n 2 180 ILE n 2 181 GLY n 2 182 VAL n 2 183 ILE n 2 184 PRO n 2 185 GLY n 2 186 PRO n 2 187 LEU n 2 188 GLU n 2 189 ARG n 2 190 ASN n 2 191 THR n 2 192 GLY n 2 193 ALA n 2 194 GLY n 2 195 ARG n 2 196 LEU n 2 197 ALA n 2 198 GLY n 2 199 PHE n 2 200 MET n 2 201 LYS n 2 202 ALA n 2 203 MET n 2 204 GLU n 2 205 GLU n 2 206 ALA n 2 207 MET n 2 208 ILE n 2 209 LYS n 2 210 VAL n 2 211 PRO n 2 212 GLU n 2 213 SER n 2 214 TRP n 2 215 ILE n 2 216 VAL n 2 217 GLN n 2 218 GLY n 2 219 ASP n 2 220 PHE n 2 221 GLU n 2 222 PRO n 2 223 GLU n 2 224 SER n 2 225 GLY n 2 226 TYR n 2 227 ARG n 2 228 ALA n 2 229 MET n 2 230 GLN n 2 231 GLN n 2 232 ILE n 2 233 LEU n 2 234 SER n 2 235 GLN n 2 236 PRO n 2 237 HIS n 2 238 ARG n 2 239 PRO n 2 240 THR n 2 241 ALA n 2 242 VAL n 2 243 PHE n 2 244 CYS n 2 245 GLY n 2 246 GLY n 2 247 ASP n 2 248 ILE n 2 249 MET n 2 250 ALA n 2 251 MET n 2 252 GLY n 2 253 ALA n 2 254 LEU n 2 255 CYS n 2 256 ALA n 2 257 ALA n 2 258 ASP n 2 259 GLU n 2 260 MET n 2 261 GLY n 2 262 LEU n 2 263 ARG n 2 264 VAL n 2 265 PRO n 2 266 GLN n 2 267 ASP n 2 268 VAL n 2 269 SER n 2 270 LEU n 2 271 ILE n 2 272 GLY n 2 273 TYR n 2 274 ASP n 2 275 ASN n 2 276 VAL n 2 277 ARG n 2 278 ASN n 2 279 ALA n 2 280 ARG n 2 281 TYR n 2 282 PHE n 2 283 THR n 2 284 PRO n 2 285 ALA n 2 286 LEU n 2 287 THR n 2 288 THR n 2 289 ILE n 2 290 HIS n 2 291 GLN n 2 292 PRO n 2 293 LYS n 2 294 ASP n 2 295 SER n 2 296 LEU n 2 297 GLY n 2 298 GLU n 2 299 THR n 2 300 ALA n 2 301 PHE n 2 302 ASN n 2 303 MET n 2 304 LEU n 2 305 LEU n 2 306 ASP n 2 307 ARG n 2 308 ILE n 2 309 VAL n 2 310 ASN n 2 311 LYS n 2 312 ARG n 2 313 GLU n 2 314 GLU n 2 315 PRO n 2 316 GLN n 2 317 SER n 2 318 ILE n 2 319 GLU n 2 320 VAL n 2 321 HIS n 2 322 PRO n 2 323 ARG n 2 324 LEU n 2 325 ILE n 2 326 GLU n 2 327 ARG n 2 328 ARG n 2 329 SER n 2 330 VAL n 2 331 ALA n 2 332 ASP n 2 333 GLY n 2 334 PRO n 2 335 PHE n 2 336 ARG n 2 337 ASP n 2 338 TYR n 2 339 ARG n 2 340 ARG n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 HPA non-polymer . HYPOXANTHINE ? 'C5 H4 N4 O' 136.111 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 699 699 DT T B . n A 1 2 DA 2 700 700 DA A B . n A 1 3 DC 3 701 701 DC C B . n A 1 4 DG 4 702 702 DG G B . n A 1 5 DC 5 703 703 DC C B . n A 1 6 DA 6 704 704 DA A B . n A 1 7 DA 7 705 705 DA A B . n A 1 8 DA 8 706 706 DA A B . n A 1 9 DC 9 707 707 DC C B . n A 1 10 DG 10 708 708 DG G B . n A 1 11 DT 11 709 709 DT T B . n A 1 12 DT 12 710 710 DT T B . n A 1 13 DT 13 711 711 DT T B . n A 1 14 DG 14 712 712 DG G B . n A 1 15 DC 15 713 713 DC C B . n A 1 16 DG 16 714 714 DG G B . n A 1 17 DT 17 715 715 DT T B . n B 2 1 ALA 1 2 ? ? ? A . n B 2 2 THR 2 3 3 THR THR A . n B 2 3 ILE 3 4 4 ILE ILE A . n B 2 4 LYS 4 5 5 LYS LYS A . n B 2 5 ASP 5 6 6 ASP ASP A . n B 2 6 VAL 6 7 7 VAL VAL A . n B 2 7 ALA 7 8 8 ALA ALA A . n B 2 8 LYS 8 9 9 LYS LYS A . n B 2 9 ARG 9 10 10 ARG ARG A . n B 2 10 ALA 10 11 11 ALA ALA A . n B 2 11 ASN 11 12 12 ASN ASN A . n B 2 12 VAL 12 13 13 VAL VAL A . n B 2 13 SER 13 14 14 SER SER A . n B 2 14 THR 14 15 15 THR THR A . n B 2 15 THR 15 16 16 THR THR A . n B 2 16 THR 16 17 17 THR THR A . n B 2 17 VAL 17 18 18 VAL VAL A . n B 2 18 SER 18 19 19 SER SER A . n B 2 19 HIS 19 20 20 HIS HIS A . n B 2 20 VAL 20 21 21 VAL VAL A . n B 2 21 ILE 21 22 22 ILE ILE A . n B 2 22 ASN 22 23 23 ASN ASN A . n B 2 23 LYS 23 24 24 LYS LYS A . n B 2 24 THR 24 25 25 THR THR A . n B 2 25 ARG 25 26 26 ARG ARG A . n B 2 26 PHE 26 27 27 PHE PHE A . n B 2 27 VAL 27 28 28 VAL VAL A . n B 2 28 ALA 28 29 29 ALA ALA A . n B 2 29 GLU 29 30 30 GLU GLU A . n B 2 30 GLU 30 31 31 GLU GLU A . n B 2 31 THR 31 32 32 THR THR A . n B 2 32 ARG 32 33 33 ARG ARG A . n B 2 33 ASN 33 34 34 ASN ASN A . n B 2 34 ALA 34 35 35 ALA ALA A . n B 2 35 VAL 35 36 36 VAL VAL A . n B 2 36 TRP 36 37 37 TRP TRP A . n B 2 37 ALA 37 38 38 ALA ALA A . n B 2 38 ALA 38 39 39 ALA ALA A . n B 2 39 ILE 39 40 40 ILE ILE A . n B 2 40 LYS 40 41 41 LYS LYS A . n B 2 41 GLU 41 42 42 GLU GLU A . n B 2 42 LEU 42 43 43 LEU LEU A . n B 2 43 HIS 43 44 44 HIS HIS A . n B 2 44 TYR 44 45 45 TYR TYR A . n B 2 45 SER 45 46 46 SER SER A . n B 2 46 PRO 46 47 47 PRO PRO A . n B 2 47 SER 47 48 48 SER SER A . n B 2 48 ALA 48 49 49 ALA ALA A . n B 2 49 VAL 49 50 50 VAL VAL A . n B 2 50 ALA 50 51 51 ALA ALA A . n B 2 51 ARG 51 52 52 ARG ARG A . n B 2 52 SER 52 53 53 SER SER A . n B 2 53 MET 53 54 54 MET MET A . n B 2 54 LYS 54 55 55 LYS LYS A . n B 2 55 VAL 55 56 56 VAL VAL A . n B 2 56 ASN 56 57 57 ASN ASN A . n B 2 57 HIS 57 58 58 HIS HIS A . n B 2 58 THR 58 59 59 THR THR A . n B 2 59 LYS 59 60 60 LYS LYS A . n B 2 60 SER 60 61 61 SER SER A . n B 2 61 ILE 61 62 62 ILE ILE A . n B 2 62 GLY 62 63 63 GLY GLY A . n B 2 63 LEU 63 64 64 LEU LEU A . n B 2 64 LEU 64 65 65 LEU LEU A . n B 2 65 ALA 65 66 66 ALA ALA A . n B 2 66 THR 66 67 67 THR THR A . n B 2 67 SER 67 68 68 SER SER A . n B 2 68 SER 68 69 69 SER SER A . n B 2 69 GLU 69 70 70 GLU GLU A . n B 2 70 ALA 70 71 71 ALA ALA A . n B 2 71 ALA 71 72 72 ALA ALA A . n B 2 72 TYR 72 73 73 TYR TYR A . n B 2 73 PHE 73 74 74 PHE PHE A . n B 2 74 ALA 74 75 75 ALA ALA A . n B 2 75 GLU 75 76 76 GLU GLU A . n B 2 76 ILE 76 77 77 ILE ILE A . n B 2 77 ILE 77 78 78 ILE ILE A . n B 2 78 GLU 78 79 79 GLU GLU A . n B 2 79 ALA 79 80 80 ALA ALA A . n B 2 80 VAL 80 81 81 VAL VAL A . n B 2 81 GLU 81 82 82 GLU GLU A . n B 2 82 LYS 82 83 83 LYS LYS A . n B 2 83 ASN 83 84 84 ASN ASN A . n B 2 84 CYS 84 85 85 CYS CYS A . n B 2 85 PHE 85 86 86 PHE PHE A . n B 2 86 GLN 86 87 87 GLN GLN A . n B 2 87 LYS 87 88 88 LYS LYS A . n B 2 88 GLY 88 89 89 GLY GLY A . n B 2 89 TYR 89 90 90 TYR TYR A . n B 2 90 THR 90 91 91 THR THR A . n B 2 91 LEU 91 92 92 LEU LEU A . n B 2 92 ILE 92 93 93 ILE ILE A . n B 2 93 LEU 93 94 94 LEU LEU A . n B 2 94 GLY 94 95 95 GLY GLY A . n B 2 95 ASN 95 96 96 ASN ASN A . n B 2 96 ALA 96 97 97 ALA ALA A . n B 2 97 TRP 97 98 98 TRP TRP A . n B 2 98 ASN 98 99 99 ASN ASN A . n B 2 99 ASN 99 100 100 ASN ASN A . n B 2 100 LEU 100 101 101 LEU LEU A . n B 2 101 GLU 101 102 102 GLU GLU A . n B 2 102 LYS 102 103 103 LYS LYS A . n B 2 103 GLN 103 104 104 GLN GLN A . n B 2 104 ARG 104 105 105 ARG ARG A . n B 2 105 ALA 105 106 106 ALA ALA A . n B 2 106 TYR 106 107 107 TYR TYR A . n B 2 107 LEU 107 108 108 LEU LEU A . n B 2 108 SER 108 109 109 SER SER A . n B 2 109 MET 109 110 110 MET MET A . n B 2 110 MET 110 111 111 MET MET A . n B 2 111 ALA 111 112 112 ALA ALA A . n B 2 112 GLN 112 113 113 GLN GLN A . n B 2 113 LYS 113 114 114 LYS LYS A . n B 2 114 ARG 114 115 115 ARG ARG A . n B 2 115 VAL 115 116 116 VAL VAL A . n B 2 116 ASP 116 117 117 ASP ASP A . n B 2 117 GLY 117 118 118 GLY GLY A . n B 2 118 LEU 118 119 119 LEU LEU A . n B 2 119 LEU 119 120 120 LEU LEU A . n B 2 120 VAL 120 121 121 VAL VAL A . n B 2 121 MET 121 122 122 MET MET A . n B 2 122 CYS 122 123 123 CYS CYS A . n B 2 123 SER 123 124 124 SER SER A . n B 2 124 GLU 124 125 125 GLU GLU A . n B 2 125 TYR 125 126 126 TYR TYR A . n B 2 126 PRO 126 127 127 PRO PRO A . n B 2 127 GLU 127 128 128 GLU GLU A . n B 2 128 PRO 128 129 129 PRO PRO A . n B 2 129 LEU 129 130 130 LEU LEU A . n B 2 130 LEU 130 131 131 LEU LEU A . n B 2 131 ALA 131 132 132 ALA ALA A . n B 2 132 MET 132 133 133 MET MET A . n B 2 133 LEU 133 134 134 LEU LEU A . n B 2 134 GLU 134 135 135 GLU GLU A . n B 2 135 GLU 135 136 136 GLU GLU A . n B 2 136 TYR 136 137 137 TYR TYR A . n B 2 137 ARG 137 138 138 ARG ARG A . n B 2 138 HIS 138 139 139 HIS HIS A . n B 2 139 ILE 139 140 140 ILE ILE A . n B 2 140 PRO 140 141 141 PRO PRO A . n B 2 141 MET 141 142 142 MET MET A . n B 2 142 VAL 142 143 143 VAL VAL A . n B 2 143 VAL 143 144 144 VAL VAL A . n B 2 144 MET 144 145 145 MET MET A . n B 2 145 ASP 145 146 146 ASP ASP A . n B 2 146 TRP 146 147 147 TRP TRP A . n B 2 147 GLY 147 148 148 GLY GLY A . n B 2 148 GLU 148 149 149 GLU GLU A . n B 2 149 ALA 149 150 150 ALA ALA A . n B 2 150 LYS 150 151 151 LYS LYS A . n B 2 151 ALA 151 152 152 ALA ALA A . n B 2 152 ASP 152 153 153 ASP ASP A . n B 2 153 PHE 153 154 154 PHE PHE A . n B 2 154 THR 154 155 155 THR THR A . n B 2 155 ASP 155 156 156 ASP ASP A . n B 2 156 ALA 156 157 157 ALA ALA A . n B 2 157 VAL 157 158 158 VAL VAL A . n B 2 158 ILE 158 159 159 ILE ILE A . n B 2 159 ASP 159 160 160 ASP ASP A . n B 2 160 ASN 160 161 161 ASN ASN A . n B 2 161 ALA 161 162 162 ALA ALA A . n B 2 162 PHE 162 163 163 PHE PHE A . n B 2 163 GLU 163 164 164 GLU GLU A . n B 2 164 GLY 164 165 165 GLY GLY A . n B 2 165 GLY 165 166 166 GLY GLY A . n B 2 166 TYR 166 167 167 TYR TYR A . n B 2 167 MET 167 168 168 MET MET A . n B 2 168 ALA 168 169 169 ALA ALA A . n B 2 169 GLY 169 170 170 GLY GLY A . n B 2 170 ARG 170 171 171 ARG ARG A . n B 2 171 TYR 171 172 172 TYR TYR A . n B 2 172 LEU 172 173 173 LEU LEU A . n B 2 173 ILE 173 174 174 ILE ILE A . n B 2 174 GLU 174 175 175 GLU GLU A . n B 2 175 ARG 175 176 176 ARG ARG A . n B 2 176 GLY 176 177 177 GLY GLY A . n B 2 177 HIS 177 178 178 HIS HIS A . n B 2 178 ARG 178 179 179 ARG ARG A . n B 2 179 GLU 179 180 180 GLU GLU A . n B 2 180 ILE 180 181 181 ILE ILE A . n B 2 181 GLY 181 182 182 GLY GLY A . n B 2 182 VAL 182 183 183 VAL VAL A . n B 2 183 ILE 183 184 184 ILE ILE A . n B 2 184 PRO 184 185 185 PRO PRO A . n B 2 185 GLY 185 186 186 GLY GLY A . n B 2 186 PRO 186 187 187 PRO PRO A . n B 2 187 LEU 187 188 188 LEU LEU A . n B 2 188 GLU 188 189 189 GLU GLU A . n B 2 189 ARG 189 190 190 ARG ARG A . n B 2 190 ASN 190 191 191 ASN ASN A . n B 2 191 THR 191 192 192 THR THR A . n B 2 192 GLY 192 193 193 GLY GLY A . n B 2 193 ALA 193 194 194 ALA ALA A . n B 2 194 GLY 194 195 195 GLY GLY A . n B 2 195 ARG 195 196 196 ARG ARG A . n B 2 196 LEU 196 197 197 LEU LEU A . n B 2 197 ALA 197 198 198 ALA ALA A . n B 2 198 GLY 198 199 199 GLY GLY A . n B 2 199 PHE 199 200 200 PHE PHE A . n B 2 200 MET 200 201 201 MET MET A . n B 2 201 LYS 201 202 202 LYS LYS A . n B 2 202 ALA 202 203 203 ALA ALA A . n B 2 203 MET 203 204 204 MET MET A . n B 2 204 GLU 204 205 205 GLU GLU A . n B 2 205 GLU 205 206 206 GLU GLU A . n B 2 206 ALA 206 207 207 ALA ALA A . n B 2 207 MET 207 208 208 MET MET A . n B 2 208 ILE 208 209 209 ILE ILE A . n B 2 209 LYS 209 210 210 LYS LYS A . n B 2 210 VAL 210 211 211 VAL VAL A . n B 2 211 PRO 211 212 212 PRO PRO A . n B 2 212 GLU 212 213 213 GLU GLU A . n B 2 213 SER 213 214 214 SER SER A . n B 2 214 TRP 214 215 215 TRP TRP A . n B 2 215 ILE 215 216 216 ILE ILE A . n B 2 216 VAL 216 217 217 VAL VAL A . n B 2 217 GLN 217 218 218 GLN GLN A . n B 2 218 GLY 218 219 219 GLY GLY A . n B 2 219 ASP 219 220 220 ASP ASP A . n B 2 220 PHE 220 221 221 PHE PHE A . n B 2 221 GLU 221 222 222 GLU GLU A . n B 2 222 PRO 222 223 223 PRO PRO A . n B 2 223 GLU 223 224 224 GLU GLU A . n B 2 224 SER 224 225 225 SER SER A . n B 2 225 GLY 225 226 226 GLY GLY A . n B 2 226 TYR 226 227 227 TYR TYR A . n B 2 227 ARG 227 228 228 ARG ARG A . n B 2 228 ALA 228 229 229 ALA ALA A . n B 2 229 MET 229 230 230 MET MET A . n B 2 230 GLN 230 231 231 GLN GLN A . n B 2 231 GLN 231 232 232 GLN GLN A . n B 2 232 ILE 232 233 233 ILE ILE A . n B 2 233 LEU 233 234 234 LEU LEU A . n B 2 234 SER 234 235 235 SER SER A . n B 2 235 GLN 235 236 236 GLN GLN A . n B 2 236 PRO 236 237 237 PRO PRO A . n B 2 237 HIS 237 238 238 HIS HIS A . n B 2 238 ARG 238 239 239 ARG ARG A . n B 2 239 PRO 239 240 240 PRO PRO A . n B 2 240 THR 240 241 241 THR THR A . n B 2 241 ALA 241 242 242 ALA ALA A . n B 2 242 VAL 242 243 243 VAL VAL A . n B 2 243 PHE 243 244 244 PHE PHE A . n B 2 244 CYS 244 245 245 CYS CYS A . n B 2 245 GLY 245 246 246 GLY GLY A . n B 2 246 GLY 246 247 247 GLY GLY A . n B 2 247 ASP 247 248 248 ASP ASP A . n B 2 248 ILE 248 249 249 ILE ILE A . n B 2 249 MET 249 250 250 MET MET A . n B 2 250 ALA 250 251 251 ALA ALA A . n B 2 251 MET 251 252 252 MET MET A . n B 2 252 GLY 252 253 253 GLY GLY A . n B 2 253 ALA 253 254 254 ALA ALA A . n B 2 254 LEU 254 255 255 LEU LEU A . n B 2 255 CYS 255 256 256 CYS CYS A . n B 2 256 ALA 256 257 257 ALA ALA A . n B 2 257 ALA 257 258 258 ALA ALA A . n B 2 258 ASP 258 259 259 ASP ASP A . n B 2 259 GLU 259 260 260 GLU GLU A . n B 2 260 MET 260 261 261 MET MET A . n B 2 261 GLY 261 262 262 GLY GLY A . n B 2 262 LEU 262 263 263 LEU LEU A . n B 2 263 ARG 263 264 264 ARG ARG A . n B 2 264 VAL 264 265 265 VAL VAL A . n B 2 265 PRO 265 266 266 PRO PRO A . n B 2 266 GLN 266 267 267 GLN GLN A . n B 2 267 ASP 267 268 268 ASP ASP A . n B 2 268 VAL 268 269 269 VAL VAL A . n B 2 269 SER 269 270 270 SER SER A . n B 2 270 LEU 270 271 271 LEU LEU A . n B 2 271 ILE 271 272 272 ILE ILE A . n B 2 272 GLY 272 273 273 GLY GLY A . n B 2 273 TYR 273 274 274 TYR TYR A . n B 2 274 ASP 274 275 275 ASP ASP A . n B 2 275 ASN 275 276 276 ASN ASN A . n B 2 276 VAL 276 277 277 VAL VAL A . n B 2 277 ARG 277 278 278 ARG ARG A . n B 2 278 ASN 278 279 279 ASN ASN A . n B 2 279 ALA 279 280 280 ALA ALA A . n B 2 280 ARG 280 281 281 ARG ARG A . n B 2 281 TYR 281 282 282 TYR TYR A . n B 2 282 PHE 282 283 283 PHE PHE A . n B 2 283 THR 283 284 284 THR THR A . n B 2 284 PRO 284 285 285 PRO PRO A . n B 2 285 ALA 285 286 286 ALA ALA A . n B 2 286 LEU 286 287 287 LEU LEU A . n B 2 287 THR 287 288 288 THR THR A . n B 2 288 THR 288 289 289 THR THR A . n B 2 289 ILE 289 290 290 ILE ILE A . n B 2 290 HIS 290 291 291 HIS HIS A . n B 2 291 GLN 291 292 292 GLN GLN A . n B 2 292 PRO 292 293 293 PRO PRO A . n B 2 293 LYS 293 294 294 LYS LYS A . n B 2 294 ASP 294 295 295 ASP ASP A . n B 2 295 SER 295 296 296 SER SER A . n B 2 296 LEU 296 297 297 LEU LEU A . n B 2 297 GLY 297 298 298 GLY GLY A . n B 2 298 GLU 298 299 299 GLU GLU A . n B 2 299 THR 299 300 300 THR THR A . n B 2 300 ALA 300 301 301 ALA ALA A . n B 2 301 PHE 301 302 302 PHE PHE A . n B 2 302 ASN 302 303 303 ASN ASN A . n B 2 303 MET 303 304 304 MET MET A . n B 2 304 LEU 304 305 305 LEU LEU A . n B 2 305 LEU 305 306 306 LEU LEU A . n B 2 306 ASP 306 307 307 ASP ASP A . n B 2 307 ARG 307 308 308 ARG ARG A . n B 2 308 ILE 308 309 309 ILE ILE A . n B 2 309 VAL 309 310 310 VAL VAL A . n B 2 310 ASN 310 311 311 ASN ASN A . n B 2 311 LYS 311 312 312 LYS LYS A . n B 2 312 ARG 312 313 313 ARG ARG A . n B 2 313 GLU 313 314 314 GLU GLU A . n B 2 314 GLU 314 315 315 GLU GLU A . n B 2 315 PRO 315 316 316 PRO PRO A . n B 2 316 GLN 316 317 317 GLN GLN A . n B 2 317 SER 317 318 318 SER SER A . n B 2 318 ILE 318 319 319 ILE ILE A . n B 2 319 GLU 319 320 320 GLU GLU A . n B 2 320 VAL 320 321 321 VAL VAL A . n B 2 321 HIS 321 322 322 HIS HIS A . n B 2 322 PRO 322 323 323 PRO PRO A . n B 2 323 ARG 323 324 324 ARG ARG A . n B 2 324 LEU 324 325 325 LEU LEU A . n B 2 325 ILE 325 326 326 ILE ILE A . n B 2 326 GLU 326 327 327 GLU GLU A . n B 2 327 ARG 327 328 328 ARG ARG A . n B 2 328 ARG 328 329 329 ARG ARG A . n B 2 329 SER 329 330 330 SER SER A . n B 2 330 VAL 330 331 331 VAL VAL A . n B 2 331 ALA 331 332 332 ALA ALA A . n B 2 332 ASP 332 333 333 ASP ASP A . n B 2 333 GLY 333 334 334 GLY GLY A . n B 2 334 PRO 334 335 335 PRO PRO A . n B 2 335 PHE 335 336 336 PHE PHE A . n B 2 336 ARG 336 337 337 ARG ARG A . n B 2 337 ASP 337 338 338 ASP ASP A . n B 2 338 TYR 338 339 339 TYR TYR A . n B 2 339 ARG 339 340 340 ARG ARG A . n B 2 340 ARG 340 341 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HPA 1 599 599 HPA HPA A . D 4 HOH 1 9 9 HOH HOH B . D 4 HOH 2 11 11 HOH HOH B . D 4 HOH 3 16 16 HOH HOH B . D 4 HOH 4 29 29 HOH HOH B . D 4 HOH 5 46 46 HOH HOH B . E 4 HOH 1 600 1 HOH HOH A . E 4 HOH 2 601 2 HOH HOH A . E 4 HOH 3 602 3 HOH HOH A . E 4 HOH 4 603 4 HOH HOH A . E 4 HOH 5 604 5 HOH HOH A . E 4 HOH 6 605 6 HOH HOH A . E 4 HOH 7 606 7 HOH HOH A . E 4 HOH 8 607 8 HOH HOH A . E 4 HOH 9 608 10 HOH HOH A . E 4 HOH 10 609 12 HOH HOH A . E 4 HOH 11 610 13 HOH HOH A . E 4 HOH 12 611 14 HOH HOH A . E 4 HOH 13 612 15 HOH HOH A . E 4 HOH 14 613 17 HOH HOH A . E 4 HOH 15 614 18 HOH HOH A . E 4 HOH 16 615 19 HOH HOH A . E 4 HOH 17 616 20 HOH HOH A . E 4 HOH 18 617 21 HOH HOH A . E 4 HOH 19 618 22 HOH HOH A . E 4 HOH 20 619 23 HOH HOH A . E 4 HOH 21 620 25 HOH HOH A . E 4 HOH 22 621 26 HOH HOH A . E 4 HOH 23 622 27 HOH HOH A . E 4 HOH 24 623 28 HOH HOH A . E 4 HOH 25 624 30 HOH HOH A . E 4 HOH 26 625 31 HOH HOH A . E 4 HOH 27 626 32 HOH HOH A . E 4 HOH 28 627 33 HOH HOH A . E 4 HOH 29 628 34 HOH HOH A . E 4 HOH 30 629 36 HOH HOH A . E 4 HOH 31 630 37 HOH HOH A . E 4 HOH 32 631 38 HOH HOH A . E 4 HOH 33 632 39 HOH HOH A . E 4 HOH 34 633 43 HOH HOH A . E 4 HOH 35 634 45 HOH HOH A . E 4 HOH 36 635 49 HOH HOH A . E 4 HOH 37 636 50 HOH HOH A . E 4 HOH 38 637 51 HOH HOH A . E 4 HOH 39 638 53 HOH HOH A . E 4 HOH 40 639 54 HOH HOH A . E 4 HOH 41 640 58 HOH HOH A . E 4 HOH 42 641 62 HOH HOH A . E 4 HOH 43 642 63 HOH HOH A . E 4 HOH 44 643 64 HOH HOH A . E 4 HOH 45 644 66 HOH HOH A . # _software.name TNT _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 1VPW _cell.length_a 175.890 _cell.length_b 94.930 _cell.length_c 81.900 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1VPW _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1VPW _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 68.83 _exptl_crystal.density_Matthews 3.95 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.crystal_id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source ? _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1VPW _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high 2.700 _reflns.number_obs 18486 _reflns.number_all ? _reflns.percent_possible_obs 98.000 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 8.8000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.700 _reflns_shell.d_res_low 2.900 _reflns_shell.percent_possible_all 79.00 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1VPW _refine.ls_number_reflns_obs 18486 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.300 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.000 _refine.ls_d_res_high 2.700 _refine.ls_percent_reflns_obs 98.000 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1740000 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol 0.800 _refine.solvent_model_param_bsol 150.0 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model TNT _refine.pdbx_stereochemistry_target_values 'ENGH AND HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_phase_error ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2652 _refine_hist.pdbx_number_atoms_nucleic_acid 345 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 50 _refine_hist.number_atoms_total 3057 _refine_hist.d_res_high 2.700 _refine_hist.d_res_low 10.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.013 ? 2.500 3103 'X-RAY DIFFRACTION' ? t_angle_deg 1.280 ? 4.000 4252 'X-RAY DIFFRACTION' ? t_dihedral_angle_d 20.93 ? 0.000 1757 'X-RAY DIFFRACTION' ? t_incorr_chiral_ct 0 ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes 0.017 ? 3.000 67 'X-RAY DIFFRACTION' ? t_gen_planes 0.010 ? 5.000 414 'X-RAY DIFFRACTION' ? t_it 5.827 ? 2.500 2706 'X-RAY DIFFRACTION' ? t_nbd 0.065 ? 15.00 312 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.70 _refine_ls_shell.d_res_low 2.90 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work ? _refine_ls_shell.percent_reflns_obs 79.00 _refine_ls_shell.R_factor_R_free ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1VPW _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1VPW _struct.title 'STRUCTURE OF THE PURR MUTANT, L54M, BOUND TO HYPOXANTHINE AND PURF OPERATOR DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1VPW _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'COMPLEX (DNA-BINDING PROTEIN-DNA), DNA-BINDING REGULATORY PROTEIN, MINOR GROOVE BENDING, TRANSCRIPTION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP PURR_ECOLI 2 ? ? P0ACP7 ? 2 PDB 1VPW 1 ? ? 1VPW ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1VPW A 1 ? 340 ? P0ACP7 1 ? 340 ? 2 341 2 2 1VPW B 1 ? 17 ? 1VPW 699 ? 715 ? 699 715 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1VPW _struct_ref_seq_dif.mon_id MET _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 53 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P0ACP7 _struct_ref_seq_dif.db_mon_id LEU _struct_ref_seq_dif.pdbx_seq_db_seq_num 53 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 54 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_555 x,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ;THE COMPLEX LIES ON A CRYSTALLOGRAPHIC TWO-FOLD AXIS, AND ONLY ONE MONOMER-DNA HALF-SITE CONSTITUTES THE ASYMMETRIC UNIT. THE COORDINATES COMPRISE ONE REPRESSOR MONOMER AND ONE DNA STRAND FOR THE ENTIRE SITE. THE FULL COMPLEX CAN BE CONSTRUCTED BY GENERATING THE SECOND HALF USING THE CRYSTALLOGRAPHIC SYMMETRY OPERATION (X, -Y, -Z). ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ILE B 3 ? ARG B 9 ? ILE A 4 ARG A 10 1 ? 7 HELX_P HELX_P2 2 THR B 14 ? ILE B 21 ? THR A 15 ILE A 22 1 ? 8 HELX_P HELX_P3 3 GLU B 29 ? GLU B 41 ? GLU A 30 GLU A 42 1 ? 13 HELX_P HELX_P4 4 ALA B 48 ? VAL B 55 ? ALA A 49 VAL A 56 1 ? 8 HELX_P HELX_P5 5 ALA B 71 ? GLN B 86 ? ALA A 72 GLN A 87 1 ? 16 HELX_P HELX_P6 6 LEU B 100 ? GLN B 112 ? LEU A 101 GLN A 113 1 ? 13 HELX_P HELX_P7 7 GLU B 127 ? TYR B 136 ? GLU A 128 TYR A 137 1 ? 10 HELX_P HELX_P8 8 ALA B 161 ? GLU B 174 ? ALA A 162 GLU A 175 1 ? 14 HELX_P HELX_P9 9 ASN B 190 ? ALA B 206 ? ASN A 191 ALA A 207 1 ? 17 HELX_P HELX_P10 10 GLU B 212 ? TRP B 214 ? GLU A 213 TRP A 215 5 ? 3 HELX_P HELX_P11 11 PRO B 222 ? LEU B 233 ? PRO A 223 LEU A 234 1 ? 12 HELX_P HELX_P12 12 ASP B 247 ? MET B 260 ? ASP A 248 MET A 261 1 ? 14 HELX_P HELX_P13 13 ALA B 279 ? TYR B 281 ? ALA A 280 TYR A 282 5 ? 3 HELX_P HELX_P14 14 ASP B 294 ? VAL B 309 ? ASP A 295 VAL A 310 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DA 2 N1 ? ? ? 1_555 A DT 17 N3 ? ? B DA 700 B DT 715 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 2 N6 ? ? ? 1_555 A DT 17 O4 ? ? B DA 700 B DT 715 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 3 N3 ? ? ? 1_555 A DG 16 N1 ? ? B DC 701 B DG 714 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 3 N4 ? ? ? 1_555 A DG 16 O6 ? ? B DC 701 B DG 714 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 3 O2 ? ? ? 1_555 A DG 16 N2 ? ? B DC 701 B DG 714 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DC 15 N3 ? ? B DG 702 B DC 713 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DC 15 O2 ? ? B DG 702 B DC 713 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DC 15 N4 ? ? B DG 702 B DC 713 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 5 N3 ? ? ? 1_555 A DG 14 N1 ? ? B DC 703 B DG 712 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 5 N4 ? ? ? 1_555 A DG 14 O6 ? ? B DC 703 B DG 712 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 5 O2 ? ? ? 1_555 A DG 14 N2 ? ? B DC 703 B DG 712 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 6 N1 ? ? ? 1_555 A DT 13 N3 ? ? B DA 704 B DT 711 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 6 N6 ? ? ? 1_555 A DT 13 O4 ? ? B DA 704 B DT 711 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 7 N1 ? ? ? 1_555 A DT 12 N3 ? ? B DA 705 B DT 710 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 7 N6 ? ? ? 1_555 A DT 12 O4 ? ? B DA 705 B DT 710 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 8 N1 ? ? ? 1_555 A DT 11 N3 ? ? B DA 706 B DT 709 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 8 N6 ? ? ? 1_555 A DT 11 O4 ? ? B DA 706 B DT 709 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 9 N3 ? ? ? 1_555 A DG 10 N1 ? ? B DC 707 B DG 708 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 9 N4 ? ? ? 1_555 A DG 10 O6 ? ? B DC 707 B DG 708 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 9 O2 ? ? ? 1_555 A DG 10 N2 ? ? B DC 707 B DG 708 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DC 9 N3 ? ? B DG 708 B DC 707 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DC 9 O2 ? ? B DG 708 B DC 707 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 10 O6 ? ? ? 1_555 A DC 9 N4 ? ? B DG 708 B DC 707 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 11 N3 ? ? ? 1_555 A DA 8 N1 ? ? B DT 709 B DA 706 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DT 11 O4 ? ? ? 1_555 A DA 8 N6 ? ? B DT 709 B DA 706 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DT 12 N3 ? ? ? 1_555 A DA 7 N1 ? ? B DT 710 B DA 705 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DT 12 O4 ? ? ? 1_555 A DA 7 N6 ? ? B DT 710 B DA 705 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DT 13 N3 ? ? ? 1_555 A DA 6 N1 ? ? B DT 711 B DA 704 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DT 13 O4 ? ? ? 1_555 A DA 6 N6 ? ? B DT 711 B DA 704 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 14 N1 ? ? ? 1_555 A DC 5 N3 ? ? B DG 712 B DC 703 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 14 N2 ? ? ? 1_555 A DC 5 O2 ? ? B DG 712 B DC 703 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 14 O6 ? ? ? 1_555 A DC 5 N4 ? ? B DG 712 B DC 703 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DC 15 N3 ? ? ? 1_555 A DG 4 N1 ? ? B DC 713 B DG 702 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DC 15 N4 ? ? ? 1_555 A DG 4 O6 ? ? B DC 713 B DG 702 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DC 15 O2 ? ? ? 1_555 A DG 4 N2 ? ? B DC 713 B DG 702 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DG 16 N1 ? ? ? 1_555 A DC 3 N3 ? ? B DG 714 B DC 701 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DG 16 N2 ? ? ? 1_555 A DC 3 O2 ? ? B DG 714 B DC 701 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DG 16 O6 ? ? ? 1_555 A DC 3 N4 ? ? B DG 714 B DC 701 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DT 17 N3 ? ? ? 1_555 A DA 2 N1 ? ? B DT 715 B DA 700 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DT 17 O4 ? ? ? 1_555 A DA 2 N6 ? ? B DT 715 B DA 700 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 VAL 264 B . ? VAL 265 A PRO 265 B ? PRO 266 A 1 9.02 2 THR 283 B . ? THR 284 A PRO 284 B ? PRO 285 A 1 -3.93 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? C ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel B 1 2 ? parallel C 1 2 ? parallel C 2 3 ? parallel C 3 4 ? parallel C 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR B 90 ? ASN B 95 ? THR A 91 ASN A 96 A 2 SER B 60 ? ALA B 65 ? SER A 61 ALA A 66 A 3 GLY B 117 ? MET B 121 ? GLY A 118 MET A 122 A 4 MET B 141 ? VAL B 143 ? MET A 142 VAL A 144 B 1 ALA B 156 ? ILE B 158 ? ALA A 157 ILE A 159 B 2 SER B 317 ? GLU B 319 ? SER A 318 GLU A 320 C 1 ILE B 180 ? ILE B 183 ? ILE A 181 ILE A 184 C 2 ALA B 241 ? CYS B 244 ? ALA A 242 CYS A 245 C 3 SER B 269 ? ASP B 274 ? SER A 270 ASP A 275 C 4 THR B 287 ? HIS B 290 ? THR A 288 HIS A 291 C 5 ARG B 323 ? ILE B 325 ? ARG A 324 ILE A 326 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR B 90 ? O THR A 91 N ILE B 61 ? N ILE A 62 A 2 3 O GLY B 62 ? O GLY A 63 N GLY B 117 ? N GLY A 118 A 3 4 O LEU B 118 ? O LEU A 119 N VAL B 142 ? N VAL A 143 B 1 2 O ALA B 156 ? O ALA A 157 N ILE B 318 ? N ILE A 319 C 1 2 O GLY B 181 ? O GLY A 182 N ALA B 241 ? N ALA A 242 C 2 3 O VAL B 242 ? O VAL A 243 N SER B 269 ? N SER A 270 C 3 4 O GLY B 272 ? O GLY A 273 N THR B 287 ? N THR A 288 C 4 5 O THR B 288 ? O THR A 289 N ILE B 325 ? N ILE A 326 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id HPA _struct_site.pdbx_auth_seq_id 599 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 9 _struct_site.details 'BINDING SITE FOR RESIDUE HPA A 599' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 TYR B 72 ? TYR A 73 . ? 1_555 ? 2 AC1 9 PHE B 73 ? PHE A 74 . ? 1_555 ? 3 AC1 9 ARG B 189 ? ARG A 190 . ? 1_555 ? 4 AC1 9 THR B 191 ? THR A 192 . ? 1_555 ? 5 AC1 9 ARG B 195 ? ARG A 196 . ? 1_555 ? 6 AC1 9 PHE B 220 ? PHE A 221 . ? 1_555 ? 7 AC1 9 ASP B 274 ? ASP A 275 . ? 1_555 ? 8 AC1 9 HOH E . ? HOH A 618 . ? 1_555 ? 9 AC1 9 HOH E . ? HOH A 628 . ? 1_555 ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 ARG _pdbx_validate_rmsd_bond.auth_seq_id_1 340 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 O _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 ARG _pdbx_validate_rmsd_bond.auth_seq_id_2 340 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.409 _pdbx_validate_rmsd_bond.bond_target_value 1.229 _pdbx_validate_rmsd_bond.bond_deviation 0.180 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.019 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C A TYR 126 ? ? N A PRO 127 ? ? CD A PRO 127 ? ? 115.68 128.40 -12.72 2.10 Y 2 1 NE A ARG 340 ? ? CZ A ARG 340 ? ? NH2 A ARG 340 ? ? 123.99 120.30 3.69 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 24 ? ? 39.86 48.54 2 1 HIS A 58 ? ? 172.61 133.74 3 1 SER A 124 ? ? 71.89 -67.28 4 1 ASP A 146 ? ? -144.17 31.23 5 1 ARG A 179 ? ? -140.42 -4.79 6 1 PHE A 221 ? ? 83.34 -5.08 7 1 ASP A 275 ? ? 139.01 -39.84 8 1 ARG A 278 ? ? -34.45 -35.41 9 1 ILE A 309 ? ? -64.61 -83.24 10 1 LYS A 312 ? ? 31.94 42.65 11 1 ARG A 328 ? ? -125.30 -128.99 # _pdbx_entry_details.entry_id 1VPW _pdbx_entry_details.compound_details ;THE LEUCINE 54 LEVERS INTERDIGITATE FROM THE MINOR GROOVE SIDE BETWEEN THE CENTRAL C.G:G.C BASE PAIR STEP OF PURF OPERATOR DNA. THE OPERATOR DNA IS THUS KINKED BY 50 DEGREES. SUBSTITUTING LEU 54 WITH MET YIELDS A MUTANT PURR THAT BINDS AND BENDS DNA SIMILARLY TO WILD TYPE. HOWEVER, THE ROUTES OF THE SIDE CHAINS AND THEIR CONTACTS TO THE C-G:G-C BASE PAIR STEP DIFFER. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 2 ? B ALA 1 2 1 Y 1 A ARG 341 ? B ARG 340 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 HPA N1 N Y N 304 HPA C2 C Y N 305 HPA N3 N Y N 306 HPA C4 C Y N 307 HPA C5 C Y N 308 HPA C6 C Y N 309 HPA O6 O N N 310 HPA N7 N Y N 311 HPA C8 C Y N 312 HPA N9 N Y N 313 HPA HN1 H N N 314 HPA H2 H N N 315 HPA HN7 H N N 316 HPA H8 H N N 317 ILE N N N N 318 ILE CA C N S 319 ILE C C N N 320 ILE O O N N 321 ILE CB C N S 322 ILE CG1 C N N 323 ILE CG2 C N N 324 ILE CD1 C N N 325 ILE OXT O N N 326 ILE H H N N 327 ILE H2 H N N 328 ILE HA H N N 329 ILE HB H N N 330 ILE HG12 H N N 331 ILE HG13 H N N 332 ILE HG21 H N N 333 ILE HG22 H N N 334 ILE HG23 H N N 335 ILE HD11 H N N 336 ILE HD12 H N N 337 ILE HD13 H N N 338 ILE HXT H N N 339 LEU N N N N 340 LEU CA C N S 341 LEU C C N N 342 LEU O O N N 343 LEU CB C N N 344 LEU CG C N N 345 LEU CD1 C N N 346 LEU CD2 C N N 347 LEU OXT O N N 348 LEU H H N N 349 LEU H2 H N N 350 LEU HA H N N 351 LEU HB2 H N N 352 LEU HB3 H N N 353 LEU HG H N N 354 LEU HD11 H N N 355 LEU HD12 H N N 356 LEU HD13 H N N 357 LEU HD21 H N N 358 LEU HD22 H N N 359 LEU HD23 H N N 360 LEU HXT H N N 361 LYS N N N N 362 LYS CA C N S 363 LYS C C N N 364 LYS O O N N 365 LYS CB C N N 366 LYS CG C N N 367 LYS CD C N N 368 LYS CE C N N 369 LYS NZ N N N 370 LYS OXT O N N 371 LYS H H N N 372 LYS H2 H N N 373 LYS HA H N N 374 LYS HB2 H N N 375 LYS HB3 H N N 376 LYS HG2 H N N 377 LYS HG3 H N N 378 LYS HD2 H N N 379 LYS HD3 H N N 380 LYS HE2 H N N 381 LYS HE3 H N N 382 LYS HZ1 H N N 383 LYS HZ2 H N N 384 LYS HZ3 H N N 385 LYS HXT H N N 386 MET N N N N 387 MET CA C N S 388 MET C C N N 389 MET O O N N 390 MET CB C N N 391 MET CG C N N 392 MET SD S N N 393 MET CE C N N 394 MET OXT O N N 395 MET H H N N 396 MET H2 H N N 397 MET HA H N N 398 MET HB2 H N N 399 MET HB3 H N N 400 MET HG2 H N N 401 MET HG3 H N N 402 MET HE1 H N N 403 MET HE2 H N N 404 MET HE3 H N N 405 MET HXT H N N 406 PHE N N N N 407 PHE CA C N S 408 PHE C C N N 409 PHE O O N N 410 PHE CB C N N 411 PHE CG C Y N 412 PHE CD1 C Y N 413 PHE CD2 C Y N 414 PHE CE1 C Y N 415 PHE CE2 C Y N 416 PHE CZ C Y N 417 PHE OXT O N N 418 PHE H H N N 419 PHE H2 H N N 420 PHE HA H N N 421 PHE HB2 H N N 422 PHE HB3 H N N 423 PHE HD1 H N N 424 PHE HD2 H N N 425 PHE HE1 H N N 426 PHE HE2 H N N 427 PHE HZ H N N 428 PHE HXT H N N 429 PRO N N N N 430 PRO CA C N S 431 PRO C C N N 432 PRO O O N N 433 PRO CB C N N 434 PRO CG C N N 435 PRO CD C N N 436 PRO OXT O N N 437 PRO H H N N 438 PRO HA H N N 439 PRO HB2 H N N 440 PRO HB3 H N N 441 PRO HG2 H N N 442 PRO HG3 H N N 443 PRO HD2 H N N 444 PRO HD3 H N N 445 PRO HXT H N N 446 SER N N N N 447 SER CA C N S 448 SER C C N N 449 SER O O N N 450 SER CB C N N 451 SER OG O N N 452 SER OXT O N N 453 SER H H N N 454 SER H2 H N N 455 SER HA H N N 456 SER HB2 H N N 457 SER HB3 H N N 458 SER HG H N N 459 SER HXT H N N 460 THR N N N N 461 THR CA C N S 462 THR C C N N 463 THR O O N N 464 THR CB C N R 465 THR OG1 O N N 466 THR CG2 C N N 467 THR OXT O N N 468 THR H H N N 469 THR H2 H N N 470 THR HA H N N 471 THR HB H N N 472 THR HG1 H N N 473 THR HG21 H N N 474 THR HG22 H N N 475 THR HG23 H N N 476 THR HXT H N N 477 TRP N N N N 478 TRP CA C N S 479 TRP C C N N 480 TRP O O N N 481 TRP CB C N N 482 TRP CG C Y N 483 TRP CD1 C Y N 484 TRP CD2 C Y N 485 TRP NE1 N Y N 486 TRP CE2 C Y N 487 TRP CE3 C Y N 488 TRP CZ2 C Y N 489 TRP CZ3 C Y N 490 TRP CH2 C Y N 491 TRP OXT O N N 492 TRP H H N N 493 TRP H2 H N N 494 TRP HA H N N 495 TRP HB2 H N N 496 TRP HB3 H N N 497 TRP HD1 H N N 498 TRP HE1 H N N 499 TRP HE3 H N N 500 TRP HZ2 H N N 501 TRP HZ3 H N N 502 TRP HH2 H N N 503 TRP HXT H N N 504 TYR N N N N 505 TYR CA C N S 506 TYR C C N N 507 TYR O O N N 508 TYR CB C N N 509 TYR CG C Y N 510 TYR CD1 C Y N 511 TYR CD2 C Y N 512 TYR CE1 C Y N 513 TYR CE2 C Y N 514 TYR CZ C Y N 515 TYR OH O N N 516 TYR OXT O N N 517 TYR H H N N 518 TYR H2 H N N 519 TYR HA H N N 520 TYR HB2 H N N 521 TYR HB3 H N N 522 TYR HD1 H N N 523 TYR HD2 H N N 524 TYR HE1 H N N 525 TYR HE2 H N N 526 TYR HH H N N 527 TYR HXT H N N 528 VAL N N N N 529 VAL CA C N S 530 VAL C C N N 531 VAL O O N N 532 VAL CB C N N 533 VAL CG1 C N N 534 VAL CG2 C N N 535 VAL OXT O N N 536 VAL H H N N 537 VAL H2 H N N 538 VAL HA H N N 539 VAL HB H N N 540 VAL HG11 H N N 541 VAL HG12 H N N 542 VAL HG13 H N N 543 VAL HG21 H N N 544 VAL HG22 H N N 545 VAL HG23 H N N 546 VAL HXT H N N 547 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 HPA N1 C2 sing Y N 301 HPA N1 C6 sing Y N 302 HPA N1 HN1 sing N N 303 HPA C2 N3 doub Y N 304 HPA C2 H2 sing N N 305 HPA N3 C4 sing Y N 306 HPA C4 C5 doub Y N 307 HPA C4 N9 sing Y N 308 HPA C5 C6 sing Y N 309 HPA C5 N7 sing Y N 310 HPA C6 O6 doub N N 311 HPA N7 C8 sing Y N 312 HPA N7 HN7 sing N N 313 HPA C8 N9 doub Y N 314 HPA C8 H8 sing N N 315 ILE N CA sing N N 316 ILE N H sing N N 317 ILE N H2 sing N N 318 ILE CA C sing N N 319 ILE CA CB sing N N 320 ILE CA HA sing N N 321 ILE C O doub N N 322 ILE C OXT sing N N 323 ILE CB CG1 sing N N 324 ILE CB CG2 sing N N 325 ILE CB HB sing N N 326 ILE CG1 CD1 sing N N 327 ILE CG1 HG12 sing N N 328 ILE CG1 HG13 sing N N 329 ILE CG2 HG21 sing N N 330 ILE CG2 HG22 sing N N 331 ILE CG2 HG23 sing N N 332 ILE CD1 HD11 sing N N 333 ILE CD1 HD12 sing N N 334 ILE CD1 HD13 sing N N 335 ILE OXT HXT sing N N 336 LEU N CA sing N N 337 LEU N H sing N N 338 LEU N H2 sing N N 339 LEU CA C sing N N 340 LEU CA CB sing N N 341 LEU CA HA sing N N 342 LEU C O doub N N 343 LEU C OXT sing N N 344 LEU CB CG sing N N 345 LEU CB HB2 sing N N 346 LEU CB HB3 sing N N 347 LEU CG CD1 sing N N 348 LEU CG CD2 sing N N 349 LEU CG HG sing N N 350 LEU CD1 HD11 sing N N 351 LEU CD1 HD12 sing N N 352 LEU CD1 HD13 sing N N 353 LEU CD2 HD21 sing N N 354 LEU CD2 HD22 sing N N 355 LEU CD2 HD23 sing N N 356 LEU OXT HXT sing N N 357 LYS N CA sing N N 358 LYS N H sing N N 359 LYS N H2 sing N N 360 LYS CA C sing N N 361 LYS CA CB sing N N 362 LYS CA HA sing N N 363 LYS C O doub N N 364 LYS C OXT sing N N 365 LYS CB CG sing N N 366 LYS CB HB2 sing N N 367 LYS CB HB3 sing N N 368 LYS CG CD sing N N 369 LYS CG HG2 sing N N 370 LYS CG HG3 sing N N 371 LYS CD CE sing N N 372 LYS CD HD2 sing N N 373 LYS CD HD3 sing N N 374 LYS CE NZ sing N N 375 LYS CE HE2 sing N N 376 LYS CE HE3 sing N N 377 LYS NZ HZ1 sing N N 378 LYS NZ HZ2 sing N N 379 LYS NZ HZ3 sing N N 380 LYS OXT HXT sing N N 381 MET N CA sing N N 382 MET N H sing N N 383 MET N H2 sing N N 384 MET CA C sing N N 385 MET CA CB sing N N 386 MET CA HA sing N N 387 MET C O doub N N 388 MET C OXT sing N N 389 MET CB CG sing N N 390 MET CB HB2 sing N N 391 MET CB HB3 sing N N 392 MET CG SD sing N N 393 MET CG HG2 sing N N 394 MET CG HG3 sing N N 395 MET SD CE sing N N 396 MET CE HE1 sing N N 397 MET CE HE2 sing N N 398 MET CE HE3 sing N N 399 MET OXT HXT sing N N 400 PHE N CA sing N N 401 PHE N H sing N N 402 PHE N H2 sing N N 403 PHE CA C sing N N 404 PHE CA CB sing N N 405 PHE CA HA sing N N 406 PHE C O doub N N 407 PHE C OXT sing N N 408 PHE CB CG sing N N 409 PHE CB HB2 sing N N 410 PHE CB HB3 sing N N 411 PHE CG CD1 doub Y N 412 PHE CG CD2 sing Y N 413 PHE CD1 CE1 sing Y N 414 PHE CD1 HD1 sing N N 415 PHE CD2 CE2 doub Y N 416 PHE CD2 HD2 sing N N 417 PHE CE1 CZ doub Y N 418 PHE CE1 HE1 sing N N 419 PHE CE2 CZ sing Y N 420 PHE CE2 HE2 sing N N 421 PHE CZ HZ sing N N 422 PHE OXT HXT sing N N 423 PRO N CA sing N N 424 PRO N CD sing N N 425 PRO N H sing N N 426 PRO CA C sing N N 427 PRO CA CB sing N N 428 PRO CA HA sing N N 429 PRO C O doub N N 430 PRO C OXT sing N N 431 PRO CB CG sing N N 432 PRO CB HB2 sing N N 433 PRO CB HB3 sing N N 434 PRO CG CD sing N N 435 PRO CG HG2 sing N N 436 PRO CG HG3 sing N N 437 PRO CD HD2 sing N N 438 PRO CD HD3 sing N N 439 PRO OXT HXT sing N N 440 SER N CA sing N N 441 SER N H sing N N 442 SER N H2 sing N N 443 SER CA C sing N N 444 SER CA CB sing N N 445 SER CA HA sing N N 446 SER C O doub N N 447 SER C OXT sing N N 448 SER CB OG sing N N 449 SER CB HB2 sing N N 450 SER CB HB3 sing N N 451 SER OG HG sing N N 452 SER OXT HXT sing N N 453 THR N CA sing N N 454 THR N H sing N N 455 THR N H2 sing N N 456 THR CA C sing N N 457 THR CA CB sing N N 458 THR CA HA sing N N 459 THR C O doub N N 460 THR C OXT sing N N 461 THR CB OG1 sing N N 462 THR CB CG2 sing N N 463 THR CB HB sing N N 464 THR OG1 HG1 sing N N 465 THR CG2 HG21 sing N N 466 THR CG2 HG22 sing N N 467 THR CG2 HG23 sing N N 468 THR OXT HXT sing N N 469 TRP N CA sing N N 470 TRP N H sing N N 471 TRP N H2 sing N N 472 TRP CA C sing N N 473 TRP CA CB sing N N 474 TRP CA HA sing N N 475 TRP C O doub N N 476 TRP C OXT sing N N 477 TRP CB CG sing N N 478 TRP CB HB2 sing N N 479 TRP CB HB3 sing N N 480 TRP CG CD1 doub Y N 481 TRP CG CD2 sing Y N 482 TRP CD1 NE1 sing Y N 483 TRP CD1 HD1 sing N N 484 TRP CD2 CE2 doub Y N 485 TRP CD2 CE3 sing Y N 486 TRP NE1 CE2 sing Y N 487 TRP NE1 HE1 sing N N 488 TRP CE2 CZ2 sing Y N 489 TRP CE3 CZ3 doub Y N 490 TRP CE3 HE3 sing N N 491 TRP CZ2 CH2 doub Y N 492 TRP CZ2 HZ2 sing N N 493 TRP CZ3 CH2 sing Y N 494 TRP CZ3 HZ3 sing N N 495 TRP CH2 HH2 sing N N 496 TRP OXT HXT sing N N 497 TYR N CA sing N N 498 TYR N H sing N N 499 TYR N H2 sing N N 500 TYR CA C sing N N 501 TYR CA CB sing N N 502 TYR CA HA sing N N 503 TYR C O doub N N 504 TYR C OXT sing N N 505 TYR CB CG sing N N 506 TYR CB HB2 sing N N 507 TYR CB HB3 sing N N 508 TYR CG CD1 doub Y N 509 TYR CG CD2 sing Y N 510 TYR CD1 CE1 sing Y N 511 TYR CD1 HD1 sing N N 512 TYR CD2 CE2 doub Y N 513 TYR CD2 HD2 sing N N 514 TYR CE1 CZ doub Y N 515 TYR CE1 HE1 sing N N 516 TYR CE2 CZ sing Y N 517 TYR CE2 HE2 sing N N 518 TYR CZ OH sing N N 519 TYR OH HH sing N N 520 TYR OXT HXT sing N N 521 VAL N CA sing N N 522 VAL N H sing N N 523 VAL N H2 sing N N 524 VAL CA C sing N N 525 VAL CA CB sing N N 526 VAL CA HA sing N N 527 VAL C O doub N N 528 VAL C OXT sing N N 529 VAL CB CG1 sing N N 530 VAL CB CG2 sing N N 531 VAL CB HB sing N N 532 VAL CG1 HG11 sing N N 533 VAL CG1 HG12 sing N N 534 VAL CG1 HG13 sing N N 535 VAL CG2 HG21 sing N N 536 VAL CG2 HG22 sing N N 537 VAL CG2 HG23 sing N N 538 VAL OXT HXT sing N N 539 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1VPW 'double helix' 1VPW 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 2 1_555 A DT 17 4_555 -0.299 -0.057 0.049 -12.586 5.189 -5.549 1 B_DA700:DT715_B B 700 ? B 715 ? 20 1 1 A DC 3 1_555 A DG 16 4_555 0.009 -0.128 0.246 -4.786 6.527 -1.933 2 B_DC701:DG714_B B 701 ? B 714 ? 19 1 1 A DG 4 1_555 A DC 15 4_555 0.606 -0.315 0.217 2.140 -0.655 -3.846 3 B_DG702:DC713_B B 702 ? B 713 ? 19 1 1 A DC 5 1_555 A DG 14 4_555 -0.330 -0.241 0.042 2.167 -18.022 1.516 4 B_DC703:DG712_B B 703 ? B 712 ? 19 1 1 A DA 6 1_555 A DT 13 4_555 -0.014 -0.218 -0.167 1.343 -3.756 1.698 5 B_DA704:DT711_B B 704 ? B 711 ? 20 1 1 A DA 7 1_555 A DT 12 4_555 0.162 -0.180 -0.161 7.015 -13.363 1.057 6 B_DA705:DT710_B B 705 ? B 710 ? 20 1 1 A DA 8 1_555 A DT 11 4_555 0.503 -0.311 0.262 13.722 -10.147 0.282 7 B_DA706:DT709_B B 706 ? B 709 ? 20 1 1 A DC 9 1_555 A DG 10 4_555 -0.187 -0.294 -0.329 17.635 -5.577 -2.709 8 B_DC707:DG708_B B 707 ? B 708 ? 19 1 1 A DG 10 1_555 A DC 9 4_555 0.187 -0.294 -0.329 -17.635 -5.577 -2.709 9 B_DG708:DC707_B B 708 ? B 707 ? 19 1 1 A DT 11 1_555 A DA 8 4_555 -0.503 -0.311 0.262 -13.722 -10.147 0.282 10 B_DT709:DA706_B B 709 ? B 706 ? 20 1 1 A DT 12 1_555 A DA 7 4_555 -0.162 -0.180 -0.161 -7.015 -13.363 1.057 11 B_DT710:DA705_B B 710 ? B 705 ? 20 1 1 A DT 13 1_555 A DA 6 4_555 0.014 -0.218 -0.167 -1.343 -3.756 1.698 12 B_DT711:DA704_B B 711 ? B 704 ? 20 1 1 A DG 14 1_555 A DC 5 4_555 0.330 -0.241 0.042 -2.167 -18.022 1.516 13 B_DG712:DC703_B B 712 ? B 703 ? 19 1 1 A DC 15 1_555 A DG 4 4_555 -0.606 -0.315 0.217 -2.140 -0.655 -3.846 14 B_DC713:DG702_B B 713 ? B 702 ? 19 1 1 A DG 16 1_555 A DC 3 4_555 -0.009 -0.128 0.246 4.786 6.527 -1.933 15 B_DG714:DC701_B B 714 ? B 701 ? 19 1 1 A DT 17 1_555 A DA 2 4_555 0.299 -0.057 0.049 12.586 5.189 -5.549 16 B_DT715:DA700_B B 715 ? B 700 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 2 1_555 A DT 17 4_555 A DC 3 1_555 A DG 16 4_555 0.216 -1.098 3.343 -5.915 4.445 24.671 -3.694 -2.122 2.971 10.115 13.461 25.740 1 BB_DA700DC701:DG714DT715_BB B 700 ? B 715 ? B 701 ? B 714 ? 1 A DC 3 1_555 A DG 16 4_555 A DG 4 1_555 A DC 15 4_555 -1.117 -0.352 3.321 1.041 -6.589 38.193 0.293 1.814 3.304 -9.977 -1.576 38.750 2 BB_DC701DG702:DC713DG714_BB B 701 ? B 714 ? B 702 ? B 713 ? 1 A DG 4 1_555 A DC 15 4_555 A DC 5 1_555 A DG 14 4_555 -0.687 -0.520 3.423 1.457 1.315 29.370 -1.315 1.675 3.360 2.589 -2.870 29.434 3 BB_DG702DC703:DG712DC713_BB B 702 ? B 713 ? B 703 ? B 712 ? 1 A DC 5 1_555 A DG 14 4_555 A DA 6 1_555 A DT 13 4_555 1.082 1.473 3.453 1.309 2.917 38.248 1.848 -1.470 3.585 4.443 -1.994 38.377 4 BB_DC703DA704:DT711DG712_BB B 703 ? B 712 ? B 704 ? B 711 ? 1 A DA 6 1_555 A DT 13 4_555 A DA 7 1_555 A DT 12 4_555 -0.494 0.504 3.267 0.035 1.073 34.306 0.685 0.843 3.280 1.818 -0.059 34.323 5 BB_DA704DA705:DT710DT711_BB B 704 ? B 711 ? B 705 ? B 710 ? 1 A DA 7 1_555 A DT 12 4_555 A DA 8 1_555 A DT 11 4_555 0.412 -0.201 3.236 -6.251 7.115 37.331 -1.167 -1.383 3.043 10.901 9.578 38.472 6 BB_DA705DA706:DT709DT710_BB B 705 ? B 710 ? B 706 ? B 709 ? 1 A DA 8 1_555 A DT 11 4_555 A DC 9 1_555 A DG 10 4_555 -0.730 -0.219 3.420 3.658 -0.788 28.858 -0.258 2.281 3.309 -1.572 -7.301 29.094 7 BB_DA706DC707:DG708DT709_BB B 706 ? B 709 ? B 707 ? B 708 ? 1 A DC 9 1_555 A DG 10 4_555 A DG 10 1_555 A DC 9 4_555 0.000 1.605 5.473 0.000 48.113 17.057 -5.334 0.000 3.396 71.624 0.000 50.877 8 BB_DC707DG708:DC707DG708_BB B 707 ? B 708 ? B 708 ? B 707 ? 1 A DG 10 1_555 A DC 9 4_555 A DT 11 1_555 A DA 8 4_555 0.730 -0.219 3.420 -3.658 -0.788 28.858 -0.258 -2.281 3.309 -1.572 7.301 29.094 9 BB_DG708DT709:DA706DC707_BB B 708 ? B 707 ? B 709 ? B 706 ? 1 A DT 11 1_555 A DA 8 4_555 A DT 12 1_555 A DA 7 4_555 -0.412 -0.201 3.236 6.251 7.115 37.331 -1.167 1.383 3.043 10.901 -9.578 38.472 10 BB_DT709DT710:DA705DA706_BB B 709 ? B 706 ? B 710 ? B 705 ? 1 A DT 12 1_555 A DA 7 4_555 A DT 13 1_555 A DA 6 4_555 0.494 0.504 3.267 -0.035 1.072 34.306 0.685 -0.843 3.280 1.818 0.059 34.323 11 BB_DT710DT711:DA704DA705_BB B 710 ? B 705 ? B 711 ? B 704 ? 1 A DT 13 1_555 A DA 6 4_555 A DG 14 1_555 A DC 5 4_555 -1.082 1.473 3.453 -1.309 2.917 38.248 1.848 1.470 3.585 4.443 1.994 38.377 12 BB_DT711DG712:DC703DA704_BB B 711 ? B 704 ? B 712 ? B 703 ? 1 A DG 14 1_555 A DC 5 4_555 A DC 15 1_555 A DG 4 4_555 0.687 -0.520 3.423 -1.457 1.315 29.370 -1.315 -1.675 3.360 2.589 2.870 29.434 13 BB_DG712DC713:DG702DC703_BB B 712 ? B 703 ? B 713 ? B 702 ? 1 A DC 15 1_555 A DG 4 4_555 A DG 16 1_555 A DC 3 4_555 1.117 -0.352 3.321 -1.041 -6.589 38.193 0.293 -1.814 3.304 -9.977 1.576 38.750 14 BB_DC713DG714:DC701DG702_BB B 713 ? B 702 ? B 714 ? B 701 ? 1 A DG 16 1_555 A DC 3 4_555 A DT 17 1_555 A DA 2 4_555 -0.216 -1.098 3.343 5.915 4.445 24.671 -3.694 2.122 2.971 10.115 -13.461 25.740 15 BB_DG714DT715:DA700DC701_BB B 714 ? B 701 ? B 715 ? B 700 ? # _atom_sites.entry_id 1VPW _atom_sites.fract_transf_matrix[1][1] 0.005685 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010534 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012210 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_