data_1VRL # _entry.id 1VRL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1VRL pdb_00001vrl 10.2210/pdb1vrl/pdb NDB PD0634 ? ? RCSB RCSB002089 ? ? WWPDB D_1000002089 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-03-22 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_conn_type 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.value' 21 4 'Structure model' '_struct_conn.conn_type_id' 22 4 'Structure model' '_struct_conn.id' 23 4 'Structure model' '_struct_conn.pdbx_dist_value' 24 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 25 4 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 26 4 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 27 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 28 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 29 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 31 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 32 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 33 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 34 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 35 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 36 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 37 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 38 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 39 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 40 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 41 4 'Structure model' '_struct_conn_type.id' 42 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 43 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 44 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2005-03-22 _pdbx_database_PDB_obs_spr.pdb_id 1VRL _pdbx_database_PDB_obs_spr.replace_pdb_id 1RRT _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1VRL _pdbx_database_status.recvd_initial_deposition_date 2005-03-08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1RRQ . unspecified PDB 1RRS . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fromme, J.C.' 1 'Banerjee, A.' 2 'Huang, S.J.' 3 'Verdine, G.L.' 4 # _citation.id primary _citation.title 'Structural basis for removal of adenine mispaired with 8-oxoguanine by MutY adenine DNA glycosylase' _citation.journal_abbrev Nature _citation.journal_volume 427 _citation.page_first 652 _citation.page_last 656 _citation.year 2004 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14961129 _citation.pdbx_database_id_DOI 10.1038/nature02306 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fromme, J.C.' 1 ? primary 'Banerjee, A.' 2 ? primary 'Huang, S.J.' 3 ? primary 'Verdine, G.L.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*AP*AP*GP*AP*CP*(8OG)P*TP*GP*GP*AP*C)-3'" 3423.249 1 ? ? ? ? 2 polymer syn "5'-D(*TP*GP*TP*CP*CP*AP*(HPD)P*GP*TP*CP*T)-3'" 3209.088 1 ? ? ? ? 3 polymer man MutY 42091.914 1 3.2.2.- 'D144N, F347S, K357E' ? ? 4 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 5 non-polymer syn 'IRON/SULFUR CLUSTER' 351.640 1 ? ? ? ? 6 non-polymer syn ADENINE 135.127 1 ? ? ? ? 7 water nat water 18.015 55 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DA)(DA)(DG)(DA)(DC)(8OG)(DT)(DG)(DG)(DA)(DC)' AAGACGTGGAC B ? 2 polydeoxyribonucleotide no yes '(DT)(DG)(DT)(DC)(DC)(DA)(HPD)(DG)(DT)(DC)(DT)' TGTCCAXGTCT C ? 3 'polypeptide(L)' no no ;GSHMTRETERFPAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADED EVLKAWEGLGYYSRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVNGNVMRVLSRLFLV TDDIAKPSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKMKKTAVKQV PLAVAVLADDEGRVLIRKRDSTGLLANLWEFPSCETDGADGKEKLEQMVGEQYGLQVELTEPIVSFEHAFSHLVWQLTVF PGRLVHGGPVEEPYRLAPEDELKAYAFPVSHQRVWREYKEWASGVRPPP ; ;GSHMTRETERFPAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADED EVLKAWEGLGYYSRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVNGNVMRVLSRLFLV TDDIAKPSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKMKKTAVKQV PLAVAVLADDEGRVLIRKRDSTGLLANLWEFPSCETDGADGKEKLEQMVGEQYGLQVELTEPIVSFEHAFSHLVWQLTVF PGRLVHGGPVEEPYRLAPEDELKAYAFPVSHQRVWREYKEWASGVRPPP ; A ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'CALCIUM ION' CA 5 'IRON/SULFUR CLUSTER' SF4 6 ADENINE ADE 7 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DA n 1 3 DG n 1 4 DA n 1 5 DC n 1 6 8OG n 1 7 DT n 1 8 DG n 1 9 DG n 1 10 DA n 1 11 DC n 2 1 DT n 2 2 DG n 2 3 DT n 2 4 DC n 2 5 DC n 2 6 DA n 2 7 HPD n 2 8 DG n 2 9 DT n 2 10 DC n 2 11 DT n 3 1 GLY n 3 2 SER n 3 3 HIS n 3 4 MET n 3 5 THR n 3 6 ARG n 3 7 GLU n 3 8 THR n 3 9 GLU n 3 10 ARG n 3 11 PHE n 3 12 PRO n 3 13 ALA n 3 14 ARG n 3 15 GLU n 3 16 PHE n 3 17 GLN n 3 18 ARG n 3 19 ASP n 3 20 LEU n 3 21 LEU n 3 22 ASP n 3 23 TRP n 3 24 PHE n 3 25 ALA n 3 26 ARG n 3 27 GLU n 3 28 ARG n 3 29 ARG n 3 30 ASP n 3 31 LEU n 3 32 PRO n 3 33 TRP n 3 34 ARG n 3 35 LYS n 3 36 ASP n 3 37 ARG n 3 38 ASP n 3 39 PRO n 3 40 TYR n 3 41 LYS n 3 42 VAL n 3 43 TRP n 3 44 VAL n 3 45 SER n 3 46 GLU n 3 47 VAL n 3 48 MET n 3 49 LEU n 3 50 GLN n 3 51 GLN n 3 52 THR n 3 53 ARG n 3 54 VAL n 3 55 GLU n 3 56 THR n 3 57 VAL n 3 58 ILE n 3 59 PRO n 3 60 TYR n 3 61 PHE n 3 62 GLU n 3 63 GLN n 3 64 PHE n 3 65 ILE n 3 66 ASP n 3 67 ARG n 3 68 PHE n 3 69 PRO n 3 70 THR n 3 71 LEU n 3 72 GLU n 3 73 ALA n 3 74 LEU n 3 75 ALA n 3 76 ASP n 3 77 ALA n 3 78 ASP n 3 79 GLU n 3 80 ASP n 3 81 GLU n 3 82 VAL n 3 83 LEU n 3 84 LYS n 3 85 ALA n 3 86 TRP n 3 87 GLU n 3 88 GLY n 3 89 LEU n 3 90 GLY n 3 91 TYR n 3 92 TYR n 3 93 SER n 3 94 ARG n 3 95 VAL n 3 96 ARG n 3 97 ASN n 3 98 LEU n 3 99 HIS n 3 100 ALA n 3 101 ALA n 3 102 VAL n 3 103 LYS n 3 104 GLU n 3 105 VAL n 3 106 LYS n 3 107 THR n 3 108 ARG n 3 109 TYR n 3 110 GLY n 3 111 GLY n 3 112 LYS n 3 113 VAL n 3 114 PRO n 3 115 ASP n 3 116 ASP n 3 117 PRO n 3 118 ASP n 3 119 GLU n 3 120 PHE n 3 121 SER n 3 122 ARG n 3 123 LEU n 3 124 LYS n 3 125 GLY n 3 126 VAL n 3 127 GLY n 3 128 PRO n 3 129 TYR n 3 130 THR n 3 131 VAL n 3 132 GLY n 3 133 ALA n 3 134 VAL n 3 135 LEU n 3 136 SER n 3 137 LEU n 3 138 ALA n 3 139 TYR n 3 140 GLY n 3 141 VAL n 3 142 PRO n 3 143 GLU n 3 144 PRO n 3 145 ALA n 3 146 VAL n 3 147 ASN n 3 148 GLY n 3 149 ASN n 3 150 VAL n 3 151 MET n 3 152 ARG n 3 153 VAL n 3 154 LEU n 3 155 SER n 3 156 ARG n 3 157 LEU n 3 158 PHE n 3 159 LEU n 3 160 VAL n 3 161 THR n 3 162 ASP n 3 163 ASP n 3 164 ILE n 3 165 ALA n 3 166 LYS n 3 167 PRO n 3 168 SER n 3 169 THR n 3 170 ARG n 3 171 LYS n 3 172 ARG n 3 173 PHE n 3 174 GLU n 3 175 GLN n 3 176 ILE n 3 177 VAL n 3 178 ARG n 3 179 GLU n 3 180 ILE n 3 181 MET n 3 182 ALA n 3 183 TYR n 3 184 GLU n 3 185 ASN n 3 186 PRO n 3 187 GLY n 3 188 ALA n 3 189 PHE n 3 190 ASN n 3 191 GLU n 3 192 ALA n 3 193 LEU n 3 194 ILE n 3 195 GLU n 3 196 LEU n 3 197 GLY n 3 198 ALA n 3 199 LEU n 3 200 VAL n 3 201 CYS n 3 202 THR n 3 203 PRO n 3 204 ARG n 3 205 ARG n 3 206 PRO n 3 207 SER n 3 208 CYS n 3 209 LEU n 3 210 LEU n 3 211 CYS n 3 212 PRO n 3 213 VAL n 3 214 GLN n 3 215 ALA n 3 216 TYR n 3 217 CYS n 3 218 GLN n 3 219 ALA n 3 220 PHE n 3 221 ALA n 3 222 GLU n 3 223 GLY n 3 224 VAL n 3 225 ALA n 3 226 GLU n 3 227 GLU n 3 228 LEU n 3 229 PRO n 3 230 VAL n 3 231 LYS n 3 232 MET n 3 233 LYS n 3 234 LYS n 3 235 THR n 3 236 ALA n 3 237 VAL n 3 238 LYS n 3 239 GLN n 3 240 VAL n 3 241 PRO n 3 242 LEU n 3 243 ALA n 3 244 VAL n 3 245 ALA n 3 246 VAL n 3 247 LEU n 3 248 ALA n 3 249 ASP n 3 250 ASP n 3 251 GLU n 3 252 GLY n 3 253 ARG n 3 254 VAL n 3 255 LEU n 3 256 ILE n 3 257 ARG n 3 258 LYS n 3 259 ARG n 3 260 ASP n 3 261 SER n 3 262 THR n 3 263 GLY n 3 264 LEU n 3 265 LEU n 3 266 ALA n 3 267 ASN n 3 268 LEU n 3 269 TRP n 3 270 GLU n 3 271 PHE n 3 272 PRO n 3 273 SER n 3 274 CYS n 3 275 GLU n 3 276 THR n 3 277 ASP n 3 278 GLY n 3 279 ALA n 3 280 ASP n 3 281 GLY n 3 282 LYS n 3 283 GLU n 3 284 LYS n 3 285 LEU n 3 286 GLU n 3 287 GLN n 3 288 MET n 3 289 VAL n 3 290 GLY n 3 291 GLU n 3 292 GLN n 3 293 TYR n 3 294 GLY n 3 295 LEU n 3 296 GLN n 3 297 VAL n 3 298 GLU n 3 299 LEU n 3 300 THR n 3 301 GLU n 3 302 PRO n 3 303 ILE n 3 304 VAL n 3 305 SER n 3 306 PHE n 3 307 GLU n 3 308 HIS n 3 309 ALA n 3 310 PHE n 3 311 SER n 3 312 HIS n 3 313 LEU n 3 314 VAL n 3 315 TRP n 3 316 GLN n 3 317 LEU n 3 318 THR n 3 319 VAL n 3 320 PHE n 3 321 PRO n 3 322 GLY n 3 323 ARG n 3 324 LEU n 3 325 VAL n 3 326 HIS n 3 327 GLY n 3 328 GLY n 3 329 PRO n 3 330 VAL n 3 331 GLU n 3 332 GLU n 3 333 PRO n 3 334 TYR n 3 335 ARG n 3 336 LEU n 3 337 ALA n 3 338 PRO n 3 339 GLU n 3 340 ASP n 3 341 GLU n 3 342 LEU n 3 343 LYS n 3 344 ALA n 3 345 TYR n 3 346 ALA n 3 347 PHE n 3 348 PRO n 3 349 VAL n 3 350 SER n 3 351 HIS n 3 352 GLN n 3 353 ARG n 3 354 VAL n 3 355 TRP n 3 356 ARG n 3 357 GLU n 3 358 TYR n 3 359 LYS n 3 360 GLU n 3 361 TRP n 3 362 ALA n 3 363 SER n 3 364 GLY n 3 365 VAL n 3 366 ARG n 3 367 PRO n 3 368 PRO n 3 369 PRO n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Geobacillus _entity_src_gen.pdbx_gene_src_gene muty _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Geobacillus stearothermophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1422 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8OG 'DNA linking' n "8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" "8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 'C10 H14 N5 O8 P' 363.221 ADE non-polymer . ADENINE ? 'C5 H5 N5' 135.127 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 HPD non-polymer . 1-HYDROXY-PENTANE-3,4-DIOL-5-PHOSPHATE ;OPEN FORM OF 2'-DEOXY-RIBOFURANOSE-5'-PHOSPHATE ; 'C5 H13 O7 P' 216.126 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SF4 non-polymer . 'IRON/SULFUR CLUSTER' ? 'Fe4 S4' 351.640 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA A B . n A 1 2 DA 2 2 2 DA A B . n A 1 3 DG 3 3 3 DG G B . n A 1 4 DA 4 4 4 DA A B . n A 1 5 DC 5 5 5 DC C B . n A 1 6 8OG 6 6 6 8OG 8OG B . n A 1 7 DT 7 7 7 DT T B . n A 1 8 DG 8 8 8 DG G B . n A 1 9 DG 9 9 9 DG G B . n A 1 10 DA 10 10 10 DA A B . n A 1 11 DC 11 11 11 DC C B . n B 2 1 DT 1 12 ? ? ? C . n B 2 2 DG 2 13 13 DG G C . n B 2 3 DT 3 14 14 DT T C . n B 2 4 DC 4 15 15 DC C C . n B 2 5 DC 5 16 16 DC C C . n B 2 6 DA 6 17 17 DA A C . n B 2 7 HPD 7 18 18 HPD HPD C . n B 2 8 DG 8 19 19 DG G C . n B 2 9 DT 9 20 20 DT T C . n B 2 10 DC 10 21 21 DC C C . n B 2 11 DT 11 22 22 DT T C . n C 3 1 GLY 1 -2 ? ? ? A . n C 3 2 SER 2 -1 ? ? ? A . n C 3 3 HIS 3 0 ? ? ? A . n C 3 4 MET 4 1 ? ? ? A . n C 3 5 THR 5 2 ? ? ? A . n C 3 6 ARG 6 3 ? ? ? A . n C 3 7 GLU 7 4 ? ? ? A . n C 3 8 THR 8 5 ? ? ? A . n C 3 9 GLU 9 6 ? ? ? A . n C 3 10 ARG 10 7 ? ? ? A . n C 3 11 PHE 11 8 ? ? ? A . n C 3 12 PRO 12 9 9 PRO PRO A . n C 3 13 ALA 13 10 10 ALA ALA A . n C 3 14 ARG 14 11 11 ARG ARG A . n C 3 15 GLU 15 12 12 GLU GLU A . n C 3 16 PHE 16 13 13 PHE PHE A . n C 3 17 GLN 17 14 14 GLN GLN A . n C 3 18 ARG 18 15 15 ARG ARG A . n C 3 19 ASP 19 16 16 ASP ASP A . n C 3 20 LEU 20 17 17 LEU LEU A . n C 3 21 LEU 21 18 18 LEU LEU A . n C 3 22 ASP 22 19 19 ASP ASP A . n C 3 23 TRP 23 20 20 TRP TRP A . n C 3 24 PHE 24 21 21 PHE PHE A . n C 3 25 ALA 25 22 22 ALA ALA A . n C 3 26 ARG 26 23 23 ARG ARG A . n C 3 27 GLU 27 24 24 GLU GLU A . n C 3 28 ARG 28 25 25 ARG ARG A . n C 3 29 ARG 29 26 26 ARG ARG A . n C 3 30 ASP 30 27 27 ASP ASP A . n C 3 31 LEU 31 28 28 LEU LEU A . n C 3 32 PRO 32 29 29 PRO PRO A . n C 3 33 TRP 33 30 30 TRP TRP A . n C 3 34 ARG 34 31 31 ARG ARG A . n C 3 35 LYS 35 32 32 LYS LYS A . n C 3 36 ASP 36 33 33 ASP ASP A . n C 3 37 ARG 37 34 34 ARG ARG A . n C 3 38 ASP 38 35 35 ASP ASP A . n C 3 39 PRO 39 36 36 PRO PRO A . n C 3 40 TYR 40 37 37 TYR TYR A . n C 3 41 LYS 41 38 38 LYS LYS A . n C 3 42 VAL 42 39 39 VAL VAL A . n C 3 43 TRP 43 40 40 TRP TRP A . n C 3 44 VAL 44 41 41 VAL VAL A . n C 3 45 SER 45 42 42 SER SER A . n C 3 46 GLU 46 43 43 GLU GLU A . n C 3 47 VAL 47 44 44 VAL VAL A . n C 3 48 MET 48 45 45 MET MET A . n C 3 49 LEU 49 46 46 LEU LEU A . n C 3 50 GLN 50 47 47 GLN GLN A . n C 3 51 GLN 51 48 48 GLN GLN A . n C 3 52 THR 52 49 49 THR THR A . n C 3 53 ARG 53 50 50 ARG ARG A . n C 3 54 VAL 54 51 51 VAL VAL A . n C 3 55 GLU 55 52 52 GLU GLU A . n C 3 56 THR 56 53 53 THR THR A . n C 3 57 VAL 57 54 54 VAL VAL A . n C 3 58 ILE 58 55 55 ILE ILE A . n C 3 59 PRO 59 56 56 PRO PRO A . n C 3 60 TYR 60 57 57 TYR TYR A . n C 3 61 PHE 61 58 58 PHE PHE A . n C 3 62 GLU 62 59 59 GLU GLU A . n C 3 63 GLN 63 60 60 GLN GLN A . n C 3 64 PHE 64 61 61 PHE PHE A . n C 3 65 ILE 65 62 62 ILE ILE A . n C 3 66 ASP 66 63 63 ASP ASP A . n C 3 67 ARG 67 64 64 ARG ARG A . n C 3 68 PHE 68 65 65 PHE PHE A . n C 3 69 PRO 69 66 66 PRO PRO A . n C 3 70 THR 70 67 67 THR THR A . n C 3 71 LEU 71 68 68 LEU LEU A . n C 3 72 GLU 72 69 69 GLU GLU A . n C 3 73 ALA 73 70 70 ALA ALA A . n C 3 74 LEU 74 71 71 LEU LEU A . n C 3 75 ALA 75 72 72 ALA ALA A . n C 3 76 ASP 76 73 73 ASP ASP A . n C 3 77 ALA 77 74 74 ALA ALA A . n C 3 78 ASP 78 75 75 ASP ASP A . n C 3 79 GLU 79 76 76 GLU GLU A . n C 3 80 ASP 80 77 77 ASP ASP A . n C 3 81 GLU 81 78 78 GLU GLU A . n C 3 82 VAL 82 79 79 VAL VAL A . n C 3 83 LEU 83 80 80 LEU LEU A . n C 3 84 LYS 84 81 81 LYS LYS A . n C 3 85 ALA 85 82 82 ALA ALA A . n C 3 86 TRP 86 83 83 TRP TRP A . n C 3 87 GLU 87 84 84 GLU GLU A . n C 3 88 GLY 88 85 85 GLY GLY A . n C 3 89 LEU 89 86 86 LEU LEU A . n C 3 90 GLY 90 87 87 GLY GLY A . n C 3 91 TYR 91 88 88 TYR TYR A . n C 3 92 TYR 92 89 89 TYR TYR A . n C 3 93 SER 93 90 90 SER SER A . n C 3 94 ARG 94 91 91 ARG ARG A . n C 3 95 VAL 95 92 92 VAL VAL A . n C 3 96 ARG 96 93 93 ARG ARG A . n C 3 97 ASN 97 94 94 ASN ASN A . n C 3 98 LEU 98 95 95 LEU LEU A . n C 3 99 HIS 99 96 96 HIS HIS A . n C 3 100 ALA 100 97 97 ALA ALA A . n C 3 101 ALA 101 98 98 ALA ALA A . n C 3 102 VAL 102 99 99 VAL VAL A . n C 3 103 LYS 103 100 100 LYS LYS A . n C 3 104 GLU 104 101 101 GLU GLU A . n C 3 105 VAL 105 102 102 VAL VAL A . n C 3 106 LYS 106 103 103 LYS LYS A . n C 3 107 THR 107 104 104 THR THR A . n C 3 108 ARG 108 105 105 ARG ARG A . n C 3 109 TYR 109 106 106 TYR TYR A . n C 3 110 GLY 110 107 107 GLY GLY A . n C 3 111 GLY 111 108 108 GLY GLY A . n C 3 112 LYS 112 109 109 LYS LYS A . n C 3 113 VAL 113 110 110 VAL VAL A . n C 3 114 PRO 114 111 111 PRO PRO A . n C 3 115 ASP 115 112 112 ASP ASP A . n C 3 116 ASP 116 113 113 ASP ASP A . n C 3 117 PRO 117 114 114 PRO PRO A . n C 3 118 ASP 118 115 115 ASP ASP A . n C 3 119 GLU 119 116 116 GLU GLU A . n C 3 120 PHE 120 117 117 PHE PHE A . n C 3 121 SER 121 118 118 SER SER A . n C 3 122 ARG 122 119 119 ARG ARG A . n C 3 123 LEU 123 120 120 LEU LEU A . n C 3 124 LYS 124 121 121 LYS LYS A . n C 3 125 GLY 125 122 122 GLY GLY A . n C 3 126 VAL 126 123 123 VAL VAL A . n C 3 127 GLY 127 124 124 GLY GLY A . n C 3 128 PRO 128 125 125 PRO PRO A . n C 3 129 TYR 129 126 126 TYR TYR A . n C 3 130 THR 130 127 127 THR THR A . n C 3 131 VAL 131 128 128 VAL VAL A . n C 3 132 GLY 132 129 129 GLY GLY A . n C 3 133 ALA 133 130 130 ALA ALA A . n C 3 134 VAL 134 131 131 VAL VAL A . n C 3 135 LEU 135 132 132 LEU LEU A . n C 3 136 SER 136 133 133 SER SER A . n C 3 137 LEU 137 134 134 LEU LEU A . n C 3 138 ALA 138 135 135 ALA ALA A . n C 3 139 TYR 139 136 136 TYR TYR A . n C 3 140 GLY 140 137 137 GLY GLY A . n C 3 141 VAL 141 138 138 VAL VAL A . n C 3 142 PRO 142 139 139 PRO PRO A . n C 3 143 GLU 143 140 140 GLU GLU A . n C 3 144 PRO 144 141 141 PRO PRO A . n C 3 145 ALA 145 142 142 ALA ALA A . n C 3 146 VAL 146 143 143 VAL VAL A . n C 3 147 ASN 147 144 144 ASN ASN A . n C 3 148 GLY 148 145 145 GLY GLY A . n C 3 149 ASN 149 146 146 ASN ASN A . n C 3 150 VAL 150 147 147 VAL VAL A . n C 3 151 MET 151 148 148 MET MET A . n C 3 152 ARG 152 149 149 ARG ARG A . n C 3 153 VAL 153 150 150 VAL VAL A . n C 3 154 LEU 154 151 151 LEU LEU A . n C 3 155 SER 155 152 152 SER SER A . n C 3 156 ARG 156 153 153 ARG ARG A . n C 3 157 LEU 157 154 154 LEU LEU A . n C 3 158 PHE 158 155 155 PHE PHE A . n C 3 159 LEU 159 156 156 LEU LEU A . n C 3 160 VAL 160 157 157 VAL VAL A . n C 3 161 THR 161 158 158 THR THR A . n C 3 162 ASP 162 159 159 ASP ASP A . n C 3 163 ASP 163 160 160 ASP ASP A . n C 3 164 ILE 164 161 161 ILE ILE A . n C 3 165 ALA 165 162 162 ALA ALA A . n C 3 166 LYS 166 163 163 LYS LYS A . n C 3 167 PRO 167 164 164 PRO PRO A . n C 3 168 SER 168 165 165 SER SER A . n C 3 169 THR 169 166 166 THR THR A . n C 3 170 ARG 170 167 167 ARG ARG A . n C 3 171 LYS 171 168 168 LYS LYS A . n C 3 172 ARG 172 169 169 ARG ARG A . n C 3 173 PHE 173 170 170 PHE PHE A . n C 3 174 GLU 174 171 171 GLU GLU A . n C 3 175 GLN 175 172 172 GLN GLN A . n C 3 176 ILE 176 173 173 ILE ILE A . n C 3 177 VAL 177 174 174 VAL VAL A . n C 3 178 ARG 178 175 175 ARG ARG A . n C 3 179 GLU 179 176 176 GLU GLU A . n C 3 180 ILE 180 177 177 ILE ILE A . n C 3 181 MET 181 178 178 MET MET A . n C 3 182 ALA 182 179 179 ALA ALA A . n C 3 183 TYR 183 180 180 TYR TYR A . n C 3 184 GLU 184 181 181 GLU GLU A . n C 3 185 ASN 185 182 182 ASN ASN A . n C 3 186 PRO 186 183 183 PRO PRO A . n C 3 187 GLY 187 184 184 GLY GLY A . n C 3 188 ALA 188 185 185 ALA ALA A . n C 3 189 PHE 189 186 186 PHE PHE A . n C 3 190 ASN 190 187 187 ASN ASN A . n C 3 191 GLU 191 188 188 GLU GLU A . n C 3 192 ALA 192 189 189 ALA ALA A . n C 3 193 LEU 193 190 190 LEU LEU A . n C 3 194 ILE 194 191 191 ILE ILE A . n C 3 195 GLU 195 192 192 GLU GLU A . n C 3 196 LEU 196 193 193 LEU LEU A . n C 3 197 GLY 197 194 194 GLY GLY A . n C 3 198 ALA 198 195 195 ALA ALA A . n C 3 199 LEU 199 196 196 LEU LEU A . n C 3 200 VAL 200 197 197 VAL VAL A . n C 3 201 CYS 201 198 198 CYS CYS A . n C 3 202 THR 202 199 199 THR THR A . n C 3 203 PRO 203 200 200 PRO PRO A . n C 3 204 ARG 204 201 201 ARG ARG A . n C 3 205 ARG 205 202 202 ARG ARG A . n C 3 206 PRO 206 203 203 PRO PRO A . n C 3 207 SER 207 204 204 SER SER A . n C 3 208 CYS 208 205 205 CYS CYS A . n C 3 209 LEU 209 206 206 LEU LEU A . n C 3 210 LEU 210 207 207 LEU LEU A . n C 3 211 CYS 211 208 208 CYS CYS A . n C 3 212 PRO 212 209 209 PRO PRO A . n C 3 213 VAL 213 210 210 VAL VAL A . n C 3 214 GLN 214 211 211 GLN GLN A . n C 3 215 ALA 215 212 212 ALA ALA A . n C 3 216 TYR 216 213 213 TYR TYR A . n C 3 217 CYS 217 214 214 CYS CYS A . n C 3 218 GLN 218 215 215 GLN GLN A . n C 3 219 ALA 219 216 216 ALA ALA A . n C 3 220 PHE 220 217 217 PHE PHE A . n C 3 221 ALA 221 218 218 ALA ALA A . n C 3 222 GLU 222 219 219 GLU GLU A . n C 3 223 GLY 223 220 220 GLY GLY A . n C 3 224 VAL 224 221 221 VAL VAL A . n C 3 225 ALA 225 222 222 ALA ALA A . n C 3 226 GLU 226 223 223 GLU GLU A . n C 3 227 GLU 227 224 224 GLU GLU A . n C 3 228 LEU 228 225 225 LEU LEU A . n C 3 229 PRO 229 226 226 PRO PRO A . n C 3 230 VAL 230 227 227 VAL VAL A . n C 3 231 LYS 231 228 228 LYS LYS A . n C 3 232 MET 232 229 229 MET MET A . n C 3 233 LYS 233 230 230 LYS LYS A . n C 3 234 LYS 234 231 231 LYS LYS A . n C 3 235 THR 235 232 232 THR THR A . n C 3 236 ALA 236 233 233 ALA ALA A . n C 3 237 VAL 237 234 234 VAL VAL A . n C 3 238 LYS 238 235 235 LYS LYS A . n C 3 239 GLN 239 236 236 GLN GLN A . n C 3 240 VAL 240 237 237 VAL VAL A . n C 3 241 PRO 241 238 238 PRO PRO A . n C 3 242 LEU 242 239 239 LEU LEU A . n C 3 243 ALA 243 240 240 ALA ALA A . n C 3 244 VAL 244 241 241 VAL VAL A . n C 3 245 ALA 245 242 242 ALA ALA A . n C 3 246 VAL 246 243 243 VAL VAL A . n C 3 247 LEU 247 244 244 LEU LEU A . n C 3 248 ALA 248 245 245 ALA ALA A . n C 3 249 ASP 249 246 246 ASP ASP A . n C 3 250 ASP 250 247 247 ASP ASP A . n C 3 251 GLU 251 248 248 GLU GLU A . n C 3 252 GLY 252 249 249 GLY GLY A . n C 3 253 ARG 253 250 250 ARG ARG A . n C 3 254 VAL 254 251 251 VAL VAL A . n C 3 255 LEU 255 252 252 LEU LEU A . n C 3 256 ILE 256 253 253 ILE ILE A . n C 3 257 ARG 257 254 254 ARG ARG A . n C 3 258 LYS 258 255 255 LYS LYS A . n C 3 259 ARG 259 256 256 ARG ARG A . n C 3 260 ASP 260 257 257 ASP ASP A . n C 3 261 SER 261 258 258 SER SER A . n C 3 262 THR 262 259 259 THR THR A . n C 3 263 GLY 263 260 260 GLY GLY A . n C 3 264 LEU 264 261 261 LEU LEU A . n C 3 265 LEU 265 262 262 LEU LEU A . n C 3 266 ALA 266 263 263 ALA ALA A . n C 3 267 ASN 267 264 264 ASN ASN A . n C 3 268 LEU 268 265 265 LEU LEU A . n C 3 269 TRP 269 266 266 TRP TRP A . n C 3 270 GLU 270 267 267 GLU GLU A . n C 3 271 PHE 271 268 268 PHE PHE A . n C 3 272 PRO 272 269 269 PRO PRO A . n C 3 273 SER 273 270 270 SER SER A . n C 3 274 CYS 274 271 271 CYS CYS A . n C 3 275 GLU 275 272 272 GLU GLU A . n C 3 276 THR 276 273 273 THR THR A . n C 3 277 ASP 277 274 274 ASP ASP A . n C 3 278 GLY 278 275 ? ? ? A . n C 3 279 ALA 279 276 ? ? ? A . n C 3 280 ASP 280 277 277 ASP ASP A . n C 3 281 GLY 281 278 278 GLY GLY A . n C 3 282 LYS 282 279 279 LYS LYS A . n C 3 283 GLU 283 280 280 GLU GLU A . n C 3 284 LYS 284 281 281 LYS LYS A . n C 3 285 LEU 285 282 282 LEU LEU A . n C 3 286 GLU 286 283 283 GLU GLU A . n C 3 287 GLN 287 284 284 GLN GLN A . n C 3 288 MET 288 285 285 MET MET A . n C 3 289 VAL 289 286 286 VAL VAL A . n C 3 290 GLY 290 287 287 GLY GLY A . n C 3 291 GLU 291 288 ? ? ? A . n C 3 292 GLN 292 289 ? ? ? A . n C 3 293 TYR 293 290 ? ? ? A . n C 3 294 GLY 294 291 ? ? ? A . n C 3 295 LEU 295 292 292 LEU LEU A . n C 3 296 GLN 296 293 293 GLN GLN A . n C 3 297 VAL 297 294 294 VAL VAL A . n C 3 298 GLU 298 295 295 GLU GLU A . n C 3 299 LEU 299 296 296 LEU LEU A . n C 3 300 THR 300 297 297 THR THR A . n C 3 301 GLU 301 298 298 GLU GLU A . n C 3 302 PRO 302 299 299 PRO PRO A . n C 3 303 ILE 303 300 300 ILE ILE A . n C 3 304 VAL 304 301 301 VAL VAL A . n C 3 305 SER 305 302 302 SER SER A . n C 3 306 PHE 306 303 303 PHE PHE A . n C 3 307 GLU 307 304 304 GLU GLU A . n C 3 308 HIS 308 305 305 HIS HIS A . n C 3 309 ALA 309 306 306 ALA ALA A . n C 3 310 PHE 310 307 307 PHE PHE A . n C 3 311 SER 311 308 308 SER SER A . n C 3 312 HIS 312 309 309 HIS HIS A . n C 3 313 LEU 313 310 310 LEU LEU A . n C 3 314 VAL 314 311 311 VAL VAL A . n C 3 315 TRP 315 312 312 TRP TRP A . n C 3 316 GLN 316 313 313 GLN GLN A . n C 3 317 LEU 317 314 314 LEU LEU A . n C 3 318 THR 318 315 315 THR THR A . n C 3 319 VAL 319 316 316 VAL VAL A . n C 3 320 PHE 320 317 317 PHE PHE A . n C 3 321 PRO 321 318 318 PRO PRO A . n C 3 322 GLY 322 319 319 GLY GLY A . n C 3 323 ARG 323 320 320 ARG ARG A . n C 3 324 LEU 324 321 321 LEU LEU A . n C 3 325 VAL 325 322 322 VAL VAL A . n C 3 326 HIS 326 323 323 HIS HIS A . n C 3 327 GLY 327 324 324 GLY GLY A . n C 3 328 GLY 328 325 325 GLY GLY A . n C 3 329 PRO 329 326 326 PRO PRO A . n C 3 330 VAL 330 327 327 VAL VAL A . n C 3 331 GLU 331 328 328 GLU GLU A . n C 3 332 GLU 332 329 329 GLU GLU A . n C 3 333 PRO 333 330 330 PRO PRO A . n C 3 334 TYR 334 331 331 TYR TYR A . n C 3 335 ARG 335 332 332 ARG ARG A . n C 3 336 LEU 336 333 333 LEU LEU A . n C 3 337 ALA 337 334 334 ALA ALA A . n C 3 338 PRO 338 335 335 PRO PRO A . n C 3 339 GLU 339 336 336 GLU GLU A . n C 3 340 ASP 340 337 337 ASP ASP A . n C 3 341 GLU 341 338 338 GLU GLU A . n C 3 342 LEU 342 339 339 LEU LEU A . n C 3 343 LYS 343 340 340 LYS LYS A . n C 3 344 ALA 344 341 341 ALA ALA A . n C 3 345 TYR 345 342 342 TYR TYR A . n C 3 346 ALA 346 343 343 ALA ALA A . n C 3 347 PHE 347 344 344 PHE PHE A . n C 3 348 PRO 348 345 345 PRO PRO A . n C 3 349 VAL 349 346 346 VAL VAL A . n C 3 350 SER 350 347 347 SER SER A . n C 3 351 HIS 351 348 348 HIS HIS A . n C 3 352 GLN 352 349 349 GLN GLN A . n C 3 353 ARG 353 350 350 ARG ARG A . n C 3 354 VAL 354 351 351 VAL VAL A . n C 3 355 TRP 355 352 352 TRP TRP A . n C 3 356 ARG 356 353 353 ARG ARG A . n C 3 357 GLU 357 354 354 GLU GLU A . n C 3 358 TYR 358 355 355 TYR TYR A . n C 3 359 LYS 359 356 356 LYS LYS A . n C 3 360 GLU 360 357 357 GLU GLU A . n C 3 361 TRP 361 358 358 TRP TRP A . n C 3 362 ALA 362 359 359 ALA ALA A . n C 3 363 SER 363 360 360 SER SER A . n C 3 364 GLY 364 361 ? ? ? A . n C 3 365 VAL 365 362 ? ? ? A . n C 3 366 ARG 366 363 ? ? ? A . n C 3 367 PRO 367 364 ? ? ? A . n C 3 368 PRO 368 365 ? ? ? A . n C 3 369 PRO 369 366 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CA 1 367 101 CA CA A . E 5 SF4 1 400 400 SF4 FS4 A . F 6 ADE 1 500 500 ADE ADE A . G 7 HOH 1 12 3 HOH HOH B . G 7 HOH 2 13 8 HOH HOH B . G 7 HOH 3 14 9 HOH HOH B . G 7 HOH 4 15 11 HOH HOH B . G 7 HOH 5 16 13 HOH HOH B . G 7 HOH 6 17 15 HOH HOH B . G 7 HOH 7 18 18 HOH HOH B . G 7 HOH 8 19 31 HOH HOH B . G 7 HOH 9 20 32 HOH HOH B . G 7 HOH 10 21 38 HOH HOH B . G 7 HOH 11 22 45 HOH HOH B . G 7 HOH 12 23 56 HOH HOH B . H 7 HOH 1 23 5 HOH HOH C . H 7 HOH 2 24 10 HOH HOH C . H 7 HOH 3 25 16 HOH HOH C . H 7 HOH 4 26 17 HOH HOH C . H 7 HOH 5 27 22 HOH HOH C . H 7 HOH 6 28 23 HOH HOH C . H 7 HOH 7 29 26 HOH HOH C . H 7 HOH 8 30 30 HOH HOH C . H 7 HOH 9 31 33 HOH HOH C . H 7 HOH 10 32 39 HOH HOH C . H 7 HOH 11 33 52 HOH HOH C . H 7 HOH 12 34 53 HOH HOH C . I 7 HOH 1 501 1 HOH HOH A . I 7 HOH 2 502 2 HOH HOH A . I 7 HOH 3 503 4 HOH HOH A . I 7 HOH 4 504 6 HOH HOH A . I 7 HOH 5 505 7 HOH HOH A . I 7 HOH 6 506 12 HOH HOH A . I 7 HOH 7 507 14 HOH HOH A . I 7 HOH 8 508 20 HOH HOH A . I 7 HOH 9 509 21 HOH HOH A . I 7 HOH 10 510 24 HOH HOH A . I 7 HOH 11 511 25 HOH HOH A . I 7 HOH 12 512 27 HOH HOH A . I 7 HOH 13 513 28 HOH HOH A . I 7 HOH 14 514 29 HOH HOH A . I 7 HOH 15 515 34 HOH HOH A . I 7 HOH 16 516 35 HOH HOH A . I 7 HOH 17 517 36 HOH HOH A . I 7 HOH 18 518 37 HOH HOH A . I 7 HOH 19 519 40 HOH HOH A . I 7 HOH 20 520 41 HOH HOH A . I 7 HOH 21 521 42 HOH HOH A . I 7 HOH 22 522 43 HOH HOH A . I 7 HOH 23 523 44 HOH HOH A . I 7 HOH 24 524 46 HOH HOH A . I 7 HOH 25 525 47 HOH HOH A . I 7 HOH 26 526 48 HOH HOH A . I 7 HOH 27 527 49 HOH HOH A . I 7 HOH 28 528 50 HOH HOH A . I 7 HOH 29 529 51 HOH HOH A . I 7 HOH 30 530 54 HOH HOH A . I 7 HOH 31 531 55 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 C DG 13 ? P ? B DG 2 P 2 1 Y 1 C DG 13 ? OP1 ? B DG 2 OP1 3 1 Y 1 C DG 13 ? OP2 ? B DG 2 OP2 4 1 Y 1 A ALA 10 ? CB ? C ALA 13 CB 5 1 Y 1 A GLU 12 ? CG ? C GLU 15 CG 6 1 Y 1 A GLU 12 ? CD ? C GLU 15 CD 7 1 Y 1 A GLU 12 ? OE1 ? C GLU 15 OE1 8 1 Y 1 A GLU 12 ? OE2 ? C GLU 15 OE2 9 1 Y 1 A ARG 15 ? CG ? C ARG 18 CG 10 1 Y 1 A ARG 15 ? CD ? C ARG 18 CD 11 1 Y 1 A ARG 15 ? NE ? C ARG 18 NE 12 1 Y 1 A ARG 15 ? CZ ? C ARG 18 CZ 13 1 Y 1 A ARG 15 ? NH1 ? C ARG 18 NH1 14 1 Y 1 A ARG 15 ? NH2 ? C ARG 18 NH2 15 1 Y 1 A ARG 50 ? CD ? C ARG 53 CD 16 1 Y 1 A ARG 50 ? NE ? C ARG 53 NE 17 1 Y 1 A ARG 50 ? CZ ? C ARG 53 CZ 18 1 Y 1 A ARG 50 ? NH1 ? C ARG 53 NH1 19 1 Y 1 A ARG 50 ? NH2 ? C ARG 53 NH2 20 1 Y 1 A GLN 60 ? CG ? C GLN 63 CG 21 1 Y 1 A GLN 60 ? CD ? C GLN 63 CD 22 1 Y 1 A GLN 60 ? OE1 ? C GLN 63 OE1 23 1 Y 1 A GLN 60 ? NE2 ? C GLN 63 NE2 24 1 Y 1 A ASP 63 ? CG ? C ASP 66 CG 25 1 Y 1 A ASP 63 ? OD1 ? C ASP 66 OD1 26 1 Y 1 A ASP 63 ? OD2 ? C ASP 66 OD2 27 1 Y 1 A ARG 64 ? CD ? C ARG 67 CD 28 1 Y 1 A ARG 64 ? NE ? C ARG 67 NE 29 1 Y 1 A ARG 64 ? CZ ? C ARG 67 CZ 30 1 Y 1 A ARG 64 ? NH1 ? C ARG 67 NH1 31 1 Y 1 A ARG 64 ? NH2 ? C ARG 67 NH2 32 1 Y 1 A GLU 69 ? CG ? C GLU 72 CG 33 1 Y 1 A GLU 69 ? CD ? C GLU 72 CD 34 1 Y 1 A GLU 69 ? OE1 ? C GLU 72 OE1 35 1 Y 1 A GLU 69 ? OE2 ? C GLU 72 OE2 36 1 Y 1 A ARG 119 ? CG ? C ARG 122 CG 37 1 Y 1 A ARG 119 ? CD ? C ARG 122 CD 38 1 Y 1 A ARG 119 ? NE ? C ARG 122 NE 39 1 Y 1 A ARG 119 ? CZ ? C ARG 122 CZ 40 1 Y 1 A ARG 119 ? NH1 ? C ARG 122 NH1 41 1 Y 1 A ARG 119 ? NH2 ? C ARG 122 NH2 42 1 Y 1 A LYS 121 ? CD ? C LYS 124 CD 43 1 Y 1 A LYS 121 ? CE ? C LYS 124 CE 44 1 Y 1 A LYS 121 ? NZ ? C LYS 124 NZ 45 1 Y 1 A GLU 140 ? CD ? C GLU 143 CD 46 1 Y 1 A GLU 140 ? OE1 ? C GLU 143 OE1 47 1 Y 1 A GLU 140 ? OE2 ? C GLU 143 OE2 48 1 Y 1 A LYS 163 ? CE ? C LYS 166 CE 49 1 Y 1 A LYS 163 ? NZ ? C LYS 166 NZ 50 1 Y 1 A SER 165 ? OG ? C SER 168 OG 51 1 Y 1 A ARG 169 ? CD ? C ARG 172 CD 52 1 Y 1 A ARG 169 ? NE ? C ARG 172 NE 53 1 Y 1 A ARG 169 ? CZ ? C ARG 172 CZ 54 1 Y 1 A ARG 169 ? NH1 ? C ARG 172 NH1 55 1 Y 1 A ARG 169 ? NH2 ? C ARG 172 NH2 56 1 Y 1 A GLN 172 ? CG ? C GLN 175 CG 57 1 Y 1 A GLN 172 ? CD ? C GLN 175 CD 58 1 Y 1 A GLN 172 ? OE1 ? C GLN 175 OE1 59 1 Y 1 A GLN 172 ? NE2 ? C GLN 175 NE2 60 1 Y 1 A GLU 181 ? CB ? C GLU 184 CB 61 1 Y 1 A GLU 181 ? CG ? C GLU 184 CG 62 1 Y 1 A GLU 181 ? CD ? C GLU 184 CD 63 1 Y 1 A GLU 181 ? OE1 ? C GLU 184 OE1 64 1 Y 1 A GLU 181 ? OE2 ? C GLU 184 OE2 65 1 Y 1 A ARG 201 ? CD ? C ARG 204 CD 66 1 Y 1 A ARG 201 ? NE ? C ARG 204 NE 67 1 Y 1 A ARG 201 ? CZ ? C ARG 204 CZ 68 1 Y 1 A ARG 201 ? NH1 ? C ARG 204 NH1 69 1 Y 1 A ARG 201 ? NH2 ? C ARG 204 NH2 70 1 Y 1 A ARG 202 ? CG ? C ARG 205 CG 71 1 Y 1 A ARG 202 ? CD ? C ARG 205 CD 72 1 Y 1 A ARG 202 ? NE ? C ARG 205 NE 73 1 Y 1 A ARG 202 ? CZ ? C ARG 205 CZ 74 1 Y 1 A ARG 202 ? NH1 ? C ARG 205 NH1 75 1 Y 1 A ARG 202 ? NH2 ? C ARG 205 NH2 76 1 Y 1 A LEU 207 ? CG ? C LEU 210 CG 77 1 Y 1 A LEU 207 ? CD1 ? C LEU 210 CD1 78 1 Y 1 A LEU 207 ? CD2 ? C LEU 210 CD2 79 1 Y 1 A GLU 219 ? CD ? C GLU 222 CD 80 1 Y 1 A GLU 219 ? OE1 ? C GLU 222 OE1 81 1 Y 1 A GLU 219 ? OE2 ? C GLU 222 OE2 82 1 Y 1 A GLU 223 ? CG ? C GLU 226 CG 83 1 Y 1 A GLU 223 ? CD ? C GLU 226 CD 84 1 Y 1 A GLU 223 ? OE1 ? C GLU 226 OE1 85 1 Y 1 A GLU 223 ? OE2 ? C GLU 226 OE2 86 1 Y 1 A MET 229 ? CG ? C MET 232 CG 87 1 Y 1 A MET 229 ? SD ? C MET 232 SD 88 1 Y 1 A MET 229 ? CE ? C MET 232 CE 89 1 Y 1 A LYS 230 ? CG ? C LYS 233 CG 90 1 Y 1 A LYS 230 ? CD ? C LYS 233 CD 91 1 Y 1 A LYS 230 ? CE ? C LYS 233 CE 92 1 Y 1 A LYS 230 ? NZ ? C LYS 233 NZ 93 1 Y 1 A LYS 231 ? CB ? C LYS 234 CB 94 1 Y 1 A LYS 231 ? CG ? C LYS 234 CG 95 1 Y 1 A LYS 231 ? CD ? C LYS 234 CD 96 1 Y 1 A LYS 231 ? CE ? C LYS 234 CE 97 1 Y 1 A LYS 231 ? NZ ? C LYS 234 NZ 98 1 Y 1 A THR 232 ? CB ? C THR 235 CB 99 1 Y 1 A THR 232 ? OG1 ? C THR 235 OG1 100 1 Y 1 A THR 232 ? CG2 ? C THR 235 CG2 101 1 Y 1 A ALA 233 ? CB ? C ALA 236 CB 102 1 Y 1 A LYS 235 ? CE ? C LYS 238 CE 103 1 Y 1 A LYS 235 ? NZ ? C LYS 238 NZ 104 1 Y 1 A GLN 236 ? CD ? C GLN 239 CD 105 1 Y 1 A GLN 236 ? OE1 ? C GLN 239 OE1 106 1 Y 1 A GLN 236 ? NE2 ? C GLN 239 NE2 107 1 Y 1 A ASP 247 ? CG ? C ASP 250 CG 108 1 Y 1 A ASP 247 ? OD1 ? C ASP 250 OD1 109 1 Y 1 A ASP 247 ? OD2 ? C ASP 250 OD2 110 1 Y 1 A GLU 248 ? CB ? C GLU 251 CB 111 1 Y 1 A GLU 248 ? CG ? C GLU 251 CG 112 1 Y 1 A GLU 248 ? CD ? C GLU 251 CD 113 1 Y 1 A GLU 248 ? OE1 ? C GLU 251 OE1 114 1 Y 1 A GLU 248 ? OE2 ? C GLU 251 OE2 115 1 Y 1 A SER 258 ? OG ? C SER 261 OG 116 1 Y 1 A GLU 272 ? CG ? C GLU 275 CG 117 1 Y 1 A GLU 272 ? CD ? C GLU 275 CD 118 1 Y 1 A GLU 272 ? OE1 ? C GLU 275 OE1 119 1 Y 1 A GLU 272 ? OE2 ? C GLU 275 OE2 120 1 Y 1 A ASP 274 ? CG ? C ASP 277 CG 121 1 Y 1 A ASP 274 ? OD1 ? C ASP 277 OD1 122 1 Y 1 A ASP 274 ? OD2 ? C ASP 277 OD2 123 1 Y 1 A ASP 277 ? CB ? C ASP 280 CB 124 1 Y 1 A ASP 277 ? CG ? C ASP 280 CG 125 1 Y 1 A ASP 277 ? OD1 ? C ASP 280 OD1 126 1 Y 1 A ASP 277 ? OD2 ? C ASP 280 OD2 127 1 Y 1 A LYS 279 ? CG ? C LYS 282 CG 128 1 Y 1 A LYS 279 ? CD ? C LYS 282 CD 129 1 Y 1 A LYS 279 ? CE ? C LYS 282 CE 130 1 Y 1 A LYS 279 ? NZ ? C LYS 282 NZ 131 1 Y 1 A GLU 280 ? CG ? C GLU 283 CG 132 1 Y 1 A GLU 280 ? CD ? C GLU 283 CD 133 1 Y 1 A GLU 280 ? OE1 ? C GLU 283 OE1 134 1 Y 1 A GLU 280 ? OE2 ? C GLU 283 OE2 135 1 Y 1 A LYS 281 ? CG ? C LYS 284 CG 136 1 Y 1 A LYS 281 ? CD ? C LYS 284 CD 137 1 Y 1 A LYS 281 ? CE ? C LYS 284 CE 138 1 Y 1 A LYS 281 ? NZ ? C LYS 284 NZ 139 1 Y 1 A GLN 284 ? CD ? C GLN 287 CD 140 1 Y 1 A GLN 284 ? OE1 ? C GLN 287 OE1 141 1 Y 1 A GLN 284 ? NE2 ? C GLN 287 NE2 142 1 Y 1 A VAL 286 ? CG1 ? C VAL 289 CG1 143 1 Y 1 A VAL 286 ? CG2 ? C VAL 289 CG2 144 1 Y 1 A LEU 292 ? CB ? C LEU 295 CB 145 1 Y 1 A LEU 292 ? CG ? C LEU 295 CG 146 1 Y 1 A LEU 292 ? CD1 ? C LEU 295 CD1 147 1 Y 1 A LEU 292 ? CD2 ? C LEU 295 CD2 148 1 Y 1 A GLN 293 ? CB ? C GLN 296 CB 149 1 Y 1 A GLN 293 ? CG ? C GLN 296 CG 150 1 Y 1 A GLN 293 ? CD ? C GLN 296 CD 151 1 Y 1 A GLN 293 ? OE1 ? C GLN 296 OE1 152 1 Y 1 A GLN 293 ? NE2 ? C GLN 296 NE2 153 1 Y 1 A VAL 294 ? CB ? C VAL 297 CB 154 1 Y 1 A VAL 294 ? CG1 ? C VAL 297 CG1 155 1 Y 1 A VAL 294 ? CG2 ? C VAL 297 CG2 156 1 Y 1 A GLU 295 ? CG ? C GLU 298 CG 157 1 Y 1 A GLU 295 ? CD ? C GLU 298 CD 158 1 Y 1 A GLU 295 ? OE1 ? C GLU 298 OE1 159 1 Y 1 A GLU 295 ? OE2 ? C GLU 298 OE2 160 1 Y 1 A THR 297 ? OG1 ? C THR 300 OG1 161 1 Y 1 A THR 297 ? CG2 ? C THR 300 CG2 162 1 Y 1 A GLU 298 ? CB ? C GLU 301 CB 163 1 Y 1 A GLU 298 ? CG ? C GLU 301 CG 164 1 Y 1 A GLU 298 ? CD ? C GLU 301 CD 165 1 Y 1 A GLU 298 ? OE1 ? C GLU 301 OE1 166 1 Y 1 A GLU 298 ? OE2 ? C GLU 301 OE2 167 1 Y 1 A ILE 300 ? CB ? C ILE 303 CB 168 1 Y 1 A ILE 300 ? CG1 ? C ILE 303 CG1 169 1 Y 1 A ILE 300 ? CG2 ? C ILE 303 CG2 170 1 Y 1 A ILE 300 ? CD1 ? C ILE 303 CD1 171 1 Y 1 A VAL 301 ? CG1 ? C VAL 304 CG1 172 1 Y 1 A VAL 301 ? CG2 ? C VAL 304 CG2 173 1 Y 1 A GLN 313 ? CG ? C GLN 316 CG 174 1 Y 1 A GLN 313 ? CD ? C GLN 316 CD 175 1 Y 1 A GLN 313 ? OE1 ? C GLN 316 OE1 176 1 Y 1 A GLN 313 ? NE2 ? C GLN 316 NE2 177 1 Y 1 A VAL 316 ? CG1 ? C VAL 319 CG1 178 1 Y 1 A VAL 316 ? CG2 ? C VAL 319 CG2 179 1 Y 1 A ARG 320 ? CG ? C ARG 323 CG 180 1 Y 1 A ARG 320 ? CD ? C ARG 323 CD 181 1 Y 1 A ARG 320 ? NE ? C ARG 323 NE 182 1 Y 1 A ARG 320 ? CZ ? C ARG 323 CZ 183 1 Y 1 A ARG 320 ? NH1 ? C ARG 323 NH1 184 1 Y 1 A ARG 320 ? NH2 ? C ARG 323 NH2 185 1 Y 1 A VAL 322 ? CG1 ? C VAL 325 CG1 186 1 Y 1 A VAL 322 ? CG2 ? C VAL 325 CG2 187 1 Y 1 A GLU 328 ? CG ? C GLU 331 CG 188 1 Y 1 A GLU 328 ? CD ? C GLU 331 CD 189 1 Y 1 A GLU 328 ? OE1 ? C GLU 331 OE1 190 1 Y 1 A GLU 328 ? OE2 ? C GLU 331 OE2 191 1 Y 1 A GLU 329 ? CB ? C GLU 332 CB 192 1 Y 1 A GLU 329 ? CG ? C GLU 332 CG 193 1 Y 1 A GLU 329 ? CD ? C GLU 332 CD 194 1 Y 1 A GLU 329 ? OE1 ? C GLU 332 OE1 195 1 Y 1 A GLU 329 ? OE2 ? C GLU 332 OE2 196 1 Y 1 A LYS 340 ? CD ? C LYS 343 CD 197 1 Y 1 A LYS 340 ? CE ? C LYS 343 CE 198 1 Y 1 A LYS 340 ? NZ ? C LYS 343 NZ 199 1 Y 1 A LYS 356 ? CG ? C LYS 359 CG 200 1 Y 1 A LYS 356 ? CD ? C LYS 359 CD 201 1 Y 1 A LYS 356 ? CE ? C LYS 359 CE 202 1 Y 1 A LYS 356 ? NZ ? C LYS 359 NZ 203 1 Y 1 A SER 360 ? OG ? C SER 363 OG # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 CNS phasing . ? 4 # _cell.entry_id 1VRL _cell.length_a 37.977 _cell.length_b 85.730 _cell.length_c 141.635 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VRL _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1VRL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.35 _exptl_crystal.density_percent_sol 47.73 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details 'Tris, PEG 8000, calcium acetate, adenine, 2-mercaptoethanol, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 Tris ? ? ? 1 2 1 'PEG 8000' ? ? ? 1 3 1 'calcium acetate' ? ? ? 1 4 1 adenine ? ? ? 1 5 1 2-mercaptoethanol ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2003-05-21 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator NULL _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1VRL _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.5 _reflns.number_obs 16721 _reflns.number_all 16749 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs 0.07 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.7 _reflns.B_iso_Wilson_estimate 39.4 _reflns.pdbx_redundancy 3.9 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.448 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.8 _reflns_shell.pdbx_redundancy 4.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1VRL _refine.ls_number_reflns_obs 16009 _refine.ls_number_reflns_all 16730 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F .0 _refine.pdbx_data_cutoff_high_absF 324540.14 _refine.pdbx_data_cutoff_low_absF .000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 33.72 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 95.7 _refine.ls_R_factor_obs 0.229 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.229 _refine.ls_R_factor_R_free 0.278 _refine.ls_R_factor_R_free_error .008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.4 _refine.ls_number_reflns_R_free 1190 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 45.8 _refine.aniso_B[1][1] -1.15 _refine.aniso_B[2][2] -.74 _refine.aniso_B[3][3] 1.89 _refine.aniso_B[1][2] .00 _refine.aniso_B[1][3] .00 _refine.aniso_B[2][3] .00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol .34454 _refine.solvent_model_param_bsol 44.7908 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1VRL _refine_analyze.Luzzati_coordinate_error_obs .33 _refine_analyze.Luzzati_sigma_a_obs .36 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free .42 _refine_analyze.Luzzati_sigma_a_free .46 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2588 _refine_hist.pdbx_number_atoms_nucleic_acid 474 _refine_hist.pdbx_number_atoms_ligand 19 _refine_hist.number_atoms_solvent 55 _refine_hist.number_atoms_total 3136 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 33.72 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d .009 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 21.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.00 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.25 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.10 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 11.44 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 13.79 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 2.50 _refine_ls_shell.d_res_low 2.59 _refine_ls_shell.number_reflns_R_work 1305 _refine_ls_shell.R_factor_R_work 0.309 _refine_ls_shell.percent_reflns_obs 87.2 _refine_ls_shell.R_factor_R_free 0.389 _refine_ls_shell.R_factor_R_free_error .036 _refine_ls_shell.percent_reflns_R_free 8.2 _refine_ls_shell.number_reflns_R_free 117 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA_REP.PARAM DNA-RNA.TOP 'X-RAY DIFFRACTION' 3 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' 4 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 5 FS4_OXOG_HPD.PARAM FS4_OXOG_HPD.TOP 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1VRL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1VRL _struct.title 'MutY adenine glycosylase in complex with DNA and soaked adenine free base' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1VRL _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text 'DNA repair, DNA glycosylase, 8-oxoguanine, protein-DNA complex, HYDROLASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 7 ? I N N 7 ? # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 1 PDB 1VRL 1VRL ? ? ? 2 2 PDB 1VRL 1VRL ? ? ? 3 3 UNP P83847_BACST P83847 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1VRL B 1 ? 11 ? 1VRL 1 ? 11 ? 1 11 2 2 1VRL C 1 ? 11 ? 1VRL 12 ? 22 ? 12 22 3 3 1VRL A 4 ? 369 ? P83847 1 ? 366 ? 1 366 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO C 12 ? ARG C 28 ? PRO A 9 ARG A 25 1 ? 17 HELX_P HELX_P2 2 LEU C 31 ? LYS C 35 ? LEU A 28 LYS A 32 5 ? 5 HELX_P HELX_P3 3 ASP C 38 ? LEU C 49 ? ASP A 35 LEU A 46 1 ? 12 HELX_P HELX_P4 4 ARG C 53 ? PHE C 68 ? ARG A 50 PHE A 65 1 ? 16 HELX_P HELX_P5 5 THR C 70 ? ALA C 77 ? THR A 67 ALA A 74 1 ? 8 HELX_P HELX_P6 6 ASP C 78 ? GLU C 87 ? ASP A 75 GLU A 84 1 ? 10 HELX_P HELX_P7 7 TYR C 92 ? GLY C 110 ? TYR A 89 GLY A 107 1 ? 19 HELX_P HELX_P8 8 ASP C 116 ? ARG C 122 ? ASP A 113 ARG A 119 1 ? 7 HELX_P HELX_P9 9 GLY C 127 ? GLY C 140 ? GLY A 124 GLY A 137 1 ? 14 HELX_P HELX_P10 10 ASN C 147 ? PHE C 158 ? ASN A 144 PHE A 155 1 ? 12 HELX_P HELX_P11 11 LYS C 166 ? MET C 181 ? LYS A 163 MET A 178 1 ? 16 HELX_P HELX_P12 12 ASN C 185 ? VAL C 200 ? ASN A 182 VAL A 197 1 ? 16 HELX_P HELX_P13 13 SER C 207 ? CYS C 211 ? SER A 204 CYS A 208 5 ? 5 HELX_P HELX_P14 14 CYS C 217 ? GLU C 222 ? CYS A 214 GLU A 219 1 ? 6 HELX_P HELX_P15 15 VAL C 224 ? LEU C 228 ? VAL A 221 LEU A 225 5 ? 5 HELX_P HELX_P16 16 ASP C 280 ? VAL C 289 ? ASP A 277 VAL A 286 1 ? 10 HELX_P HELX_P17 17 ASP C 340 ? TYR C 345 ? ASP A 337 TYR A 342 5 ? 6 HELX_P HELX_P18 18 PRO C 348 ? ALA C 362 ? PRO A 345 ALA A 359 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DC 5 "O3'" ? ? ? 1_555 A 8OG 6 P ? ? B DC 5 B 8OG 6 1_555 ? ? ? ? ? ? ? 1.579 ? ? covale2 covale both ? A 8OG 6 "O3'" ? ? ? 1_555 A DT 7 P ? ? B 8OG 6 B DT 7 1_555 ? ? ? ? ? ? ? 1.578 ? ? covale3 covale one ? B DA 6 "O3'" A ? ? 1_555 B HPD 7 P A ? C DA 17 C HPD 18 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale4 covale one ? B DA 6 "O3'" B ? ? 1_555 B HPD 7 P B ? C DA 17 C HPD 18 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale5 covale one ? B HPD 7 "O3'" A ? ? 1_555 B DG 8 P A ? C HPD 18 C DG 19 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale6 covale one ? B HPD 7 "O3'" B ? ? 1_555 B DG 8 P B ? C HPD 18 C DG 19 1_555 ? ? ? ? ? ? ? 1.603 ? ? metalc1 metalc ? ? C SER 121 O ? ? ? 1_555 D CA . CA ? ? A SER 118 A CA 367 1_555 ? ? ? ? ? ? ? 2.531 ? ? metalc2 metalc ? ? C SER 121 OG ? ? ? 1_555 D CA . CA ? ? A SER 118 A CA 367 1_555 ? ? ? ? ? ? ? 3.000 ? ? metalc3 metalc ? ? C VAL 126 O ? ? ? 1_555 D CA . CA ? ? A VAL 123 A CA 367 1_555 ? ? ? ? ? ? ? 2.693 ? ? metalc4 metalc ? ? C CYS 201 SG ? ? ? 1_555 E SF4 . FE2 ? ? A CYS 198 A SF4 400 1_555 ? ? ? ? ? ? ? 2.410 ? ? metalc5 metalc ? ? C CYS 208 SG ? ? ? 1_555 E SF4 . FE3 ? ? A CYS 205 A SF4 400 1_555 ? ? ? ? ? ? ? 2.390 ? ? metalc6 metalc ? ? C CYS 211 SG ? ? ? 1_555 E SF4 . FE1 ? ? A CYS 208 A SF4 400 1_555 ? ? ? ? ? ? ? 2.543 ? ? metalc7 metalc ? ? C CYS 217 SG ? ? ? 1_555 E SF4 . FE4 ? ? A CYS 214 A SF4 400 1_555 ? ? ? ? ? ? ? 2.523 ? ? metalc8 metalc ? ? D CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 367 A HOH 504 1_555 ? ? ? ? ? ? ? 2.698 ? ? metalc9 metalc ? ? D CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 367 A HOH 505 1_555 ? ? ? ? ? ? ? 2.737 ? ? hydrog1 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 11 N3 ? ? B DA 2 C DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 11 O4 ? ? B DA 2 C DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 10 N3 ? ? B DG 3 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 10 O2 ? ? B DG 3 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 10 N4 ? ? B DG 3 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 9 N3 ? ? B DA 4 C DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 9 O4 ? ? B DA 4 C DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 8 N1 A ? B DC 5 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 8 O6 A ? B DC 5 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 8 N2 A ? B DC 5 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 6 N1 A ? B DT 7 C DA 17 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog12 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B DC 5 N3 ? ? B DG 8 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 5 O2 ? ? B DG 8 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B DC 5 N4 ? ? B DG 8 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 4 N3 ? ? B DG 9 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 4 O2 ? ? B DG 9 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 4 N4 ? ? B DG 9 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 10 N1 ? ? ? 1_555 B DT 3 N3 ? ? B DA 10 C DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DT 3 O4 ? ? B DA 10 C DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 2 N1 ? ? B DC 11 C DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 2 O6 ? ? B DC 11 C DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 2 N2 ? ? B DC 11 C DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? C SER 121 ? A SER 118 ? 1_555 CA ? D CA . ? A CA 367 ? 1_555 OG ? C SER 121 ? A SER 118 ? 1_555 62.3 ? 2 O ? C SER 121 ? A SER 118 ? 1_555 CA ? D CA . ? A CA 367 ? 1_555 O ? C VAL 126 ? A VAL 123 ? 1_555 82.3 ? 3 OG ? C SER 121 ? A SER 118 ? 1_555 CA ? D CA . ? A CA 367 ? 1_555 O ? C VAL 126 ? A VAL 123 ? 1_555 86.7 ? 4 O ? C SER 121 ? A SER 118 ? 1_555 CA ? D CA . ? A CA 367 ? 1_555 O ? I HOH . ? A HOH 504 ? 1_555 70.0 ? 5 OG ? C SER 121 ? A SER 118 ? 1_555 CA ? D CA . ? A CA 367 ? 1_555 O ? I HOH . ? A HOH 504 ? 1_555 131.9 ? 6 O ? C VAL 126 ? A VAL 123 ? 1_555 CA ? D CA . ? A CA 367 ? 1_555 O ? I HOH . ? A HOH 504 ? 1_555 81.1 ? 7 O ? C SER 121 ? A SER 118 ? 1_555 CA ? D CA . ? A CA 367 ? 1_555 O ? I HOH . ? A HOH 505 ? 1_555 134.3 ? 8 OG ? C SER 121 ? A SER 118 ? 1_555 CA ? D CA . ? A CA 367 ? 1_555 O ? I HOH . ? A HOH 505 ? 1_555 72.3 ? 9 O ? C VAL 126 ? A VAL 123 ? 1_555 CA ? D CA . ? A CA 367 ? 1_555 O ? I HOH . ? A HOH 505 ? 1_555 90.4 ? 10 O ? I HOH . ? A HOH 504 ? 1_555 CA ? D CA . ? A CA 367 ? 1_555 O ? I HOH . ? A HOH 505 ? 1_555 153.1 ? 11 SG ? C CYS 201 ? A CYS 198 ? 1_555 FE2 ? E SF4 . ? A SF4 400 ? 1_555 S1 ? E SF4 . ? A SF4 400 ? 1_555 109.9 ? 12 SG ? C CYS 201 ? A CYS 198 ? 1_555 FE2 ? E SF4 . ? A SF4 400 ? 1_555 S3 ? E SF4 . ? A SF4 400 ? 1_555 116.4 ? 13 S1 ? E SF4 . ? A SF4 400 ? 1_555 FE2 ? E SF4 . ? A SF4 400 ? 1_555 S3 ? E SF4 . ? A SF4 400 ? 1_555 111.9 ? 14 SG ? C CYS 201 ? A CYS 198 ? 1_555 FE2 ? E SF4 . ? A SF4 400 ? 1_555 S4 ? E SF4 . ? A SF4 400 ? 1_555 113.9 ? 15 S1 ? E SF4 . ? A SF4 400 ? 1_555 FE2 ? E SF4 . ? A SF4 400 ? 1_555 S4 ? E SF4 . ? A SF4 400 ? 1_555 98.3 ? 16 S3 ? E SF4 . ? A SF4 400 ? 1_555 FE2 ? E SF4 . ? A SF4 400 ? 1_555 S4 ? E SF4 . ? A SF4 400 ? 1_555 105.0 ? 17 SG ? C CYS 208 ? A CYS 205 ? 1_555 FE3 ? E SF4 . ? A SF4 400 ? 1_555 S1 ? E SF4 . ? A SF4 400 ? 1_555 104.4 ? 18 SG ? C CYS 208 ? A CYS 205 ? 1_555 FE3 ? E SF4 . ? A SF4 400 ? 1_555 S2 ? E SF4 . ? A SF4 400 ? 1_555 120.7 ? 19 S1 ? E SF4 . ? A SF4 400 ? 1_555 FE3 ? E SF4 . ? A SF4 400 ? 1_555 S2 ? E SF4 . ? A SF4 400 ? 1_555 103.7 ? 20 SG ? C CYS 208 ? A CYS 205 ? 1_555 FE3 ? E SF4 . ? A SF4 400 ? 1_555 S4 ? E SF4 . ? A SF4 400 ? 1_555 118.2 ? 21 S1 ? E SF4 . ? A SF4 400 ? 1_555 FE3 ? E SF4 . ? A SF4 400 ? 1_555 S4 ? E SF4 . ? A SF4 400 ? 1_555 103.1 ? 22 S2 ? E SF4 . ? A SF4 400 ? 1_555 FE3 ? E SF4 . ? A SF4 400 ? 1_555 S4 ? E SF4 . ? A SF4 400 ? 1_555 104.4 ? 23 SG ? C CYS 211 ? A CYS 208 ? 1_555 FE1 ? E SF4 . ? A SF4 400 ? 1_555 S2 ? E SF4 . ? A SF4 400 ? 1_555 124.1 ? 24 SG ? C CYS 211 ? A CYS 208 ? 1_555 FE1 ? E SF4 . ? A SF4 400 ? 1_555 S3 ? E SF4 . ? A SF4 400 ? 1_555 114.2 ? 25 S2 ? E SF4 . ? A SF4 400 ? 1_555 FE1 ? E SF4 . ? A SF4 400 ? 1_555 S3 ? E SF4 . ? A SF4 400 ? 1_555 100.2 ? 26 SG ? C CYS 211 ? A CYS 208 ? 1_555 FE1 ? E SF4 . ? A SF4 400 ? 1_555 S4 ? E SF4 . ? A SF4 400 ? 1_555 114.0 ? 27 S2 ? E SF4 . ? A SF4 400 ? 1_555 FE1 ? E SF4 . ? A SF4 400 ? 1_555 S4 ? E SF4 . ? A SF4 400 ? 1_555 98.7 ? 28 S3 ? E SF4 . ? A SF4 400 ? 1_555 FE1 ? E SF4 . ? A SF4 400 ? 1_555 S4 ? E SF4 . ? A SF4 400 ? 1_555 102.4 ? 29 SG ? C CYS 217 ? A CYS 214 ? 1_555 FE4 ? E SF4 . ? A SF4 400 ? 1_555 S1 ? E SF4 . ? A SF4 400 ? 1_555 108.9 ? 30 SG ? C CYS 217 ? A CYS 214 ? 1_555 FE4 ? E SF4 . ? A SF4 400 ? 1_555 S2 ? E SF4 . ? A SF4 400 ? 1_555 107.2 ? 31 S1 ? E SF4 . ? A SF4 400 ? 1_555 FE4 ? E SF4 . ? A SF4 400 ? 1_555 S2 ? E SF4 . ? A SF4 400 ? 1_555 97.7 ? 32 SG ? C CYS 217 ? A CYS 214 ? 1_555 FE4 ? E SF4 . ? A SF4 400 ? 1_555 S3 ? E SF4 . ? A SF4 400 ? 1_555 129.2 ? 33 S1 ? E SF4 . ? A SF4 400 ? 1_555 FE4 ? E SF4 . ? A SF4 400 ? 1_555 S3 ? E SF4 . ? A SF4 400 ? 1_555 105.4 ? 34 S2 ? E SF4 . ? A SF4 400 ? 1_555 FE4 ? E SF4 . ? A SF4 400 ? 1_555 S3 ? E SF4 . ? A SF4 400 ? 1_555 103.9 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LEU _struct_mon_prot_cis.label_seq_id 228 _struct_mon_prot_cis.label_asym_id C _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LEU _struct_mon_prot_cis.auth_seq_id 225 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 229 _struct_mon_prot_cis.pdbx_label_asym_id_2 C _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 226 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.54 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER C 273 ? GLU C 275 ? SER A 270 GLU A 272 A 2 LYS C 238 ? ALA C 248 ? LYS A 235 ALA A 245 A 3 LEU C 313 ? LEU C 324 ? LEU A 310 LEU A 321 A 4 VAL C 297 ? LEU C 299 ? VAL A 294 LEU A 296 B 1 SER C 273 ? GLU C 275 ? SER A 270 GLU A 272 B 2 LYS C 238 ? ALA C 248 ? LYS A 235 ALA A 245 B 3 LEU C 313 ? LEU C 324 ? LEU A 310 LEU A 321 B 4 VAL C 304 ? ALA C 309 ? VAL A 301 ALA A 306 C 1 TRP C 269 ? GLU C 270 ? TRP A 266 GLU A 267 C 2 ARG C 253 ? LYS C 258 ? ARG A 250 LYS A 255 C 3 TYR C 334 ? PRO C 338 ? TYR A 331 PRO A 335 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O CYS C 274 ? O CYS A 271 N ALA C 243 ? N ALA A 240 A 2 3 N LEU C 242 ? N LEU A 239 O GLN C 316 ? O GLN A 313 A 3 4 O ARG C 323 ? O ARG A 320 N GLU C 298 ? N GLU A 295 B 1 2 O CYS C 274 ? O CYS A 271 N ALA C 243 ? N ALA A 240 B 2 3 N LEU C 242 ? N LEU A 239 O GLN C 316 ? O GLN A 313 B 3 4 O VAL C 319 ? O VAL A 316 N VAL C 304 ? N VAL A 301 C 1 2 O GLU C 270 ? O GLU A 267 N ARG C 257 ? N ARG A 254 C 2 3 N VAL C 254 ? N VAL A 251 O ALA C 337 ? O ALA A 334 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CA 367 ? 4 'BINDING SITE FOR RESIDUE CA A 367' AC2 Software A SF4 400 ? 7 'BINDING SITE FOR RESIDUE SF4 A 400' AC3 Software A ADE 500 ? 7 'BINDING SITE FOR RESIDUE ADE A 500' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 SER C 121 ? SER A 118 . ? 1_555 ? 2 AC1 4 VAL C 126 ? VAL A 123 . ? 1_555 ? 3 AC1 4 HOH I . ? HOH A 504 . ? 1_555 ? 4 AC1 4 HOH I . ? HOH A 505 . ? 1_555 ? 5 AC2 7 ARG C 156 ? ARG A 153 . ? 1_555 ? 6 AC2 7 VAL C 200 ? VAL A 197 . ? 1_555 ? 7 AC2 7 CYS C 201 ? CYS A 198 . ? 1_555 ? 8 AC2 7 CYS C 208 ? CYS A 205 . ? 1_555 ? 9 AC2 7 CYS C 211 ? CYS A 208 . ? 1_555 ? 10 AC2 7 CYS C 217 ? CYS A 214 . ? 1_555 ? 11 AC2 7 ALA C 225 ? ALA A 222 . ? 1_555 ? 12 AC3 7 TRP C 33 ? TRP A 30 . ? 1_555 ? 13 AC3 7 ARG C 34 ? ARG A 31 . ? 1_555 ? 14 AC3 7 GLU C 46 ? GLU A 43 . ? 1_555 ? 15 AC3 7 LEU C 49 ? LEU A 46 . ? 1_555 ? 16 AC3 7 TYR C 129 ? TYR A 126 . ? 1_555 ? 17 AC3 7 GLU C 191 ? GLU A 188 . ? 1_555 ? 18 AC3 7 HPD B 7 ? HPD C 18 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TRP A 30 ? ? -68.35 2.30 2 1 PRO A 139 ? ? -62.55 19.39 3 1 ASN A 144 ? ? -124.00 -161.58 4 1 VAL A 197 ? ? -125.11 -67.90 5 1 ALA A 212 ? ? -41.09 -83.52 6 1 TYR A 213 ? ? -48.85 7.43 7 1 ASP A 246 ? ? -79.42 -167.44 8 1 LEU A 262 ? ? 32.12 43.98 9 1 PRO A 269 ? ? -38.38 124.85 10 1 GLN A 293 ? ? 123.91 58.36 11 1 THR A 297 ? ? -123.03 -159.71 12 1 HIS A 305 ? ? -175.80 105.06 13 1 GLU A 328 ? ? -113.79 -146.51 14 1 GLU A 329 ? ? 54.31 -143.98 15 1 ASP A 337 ? ? -79.73 20.94 16 1 LYS A 340 ? ? -58.53 -2.29 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DA _pdbx_validate_planes.auth_asym_id B _pdbx_validate_planes.auth_seq_id 1 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.055 _pdbx_validate_planes.type 'SIDE CHAIN' # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id 8OG _pdbx_struct_mod_residue.label_seq_id 6 _pdbx_struct_mod_residue.auth_asym_id B _pdbx_struct_mod_residue.auth_comp_id 8OG _pdbx_struct_mod_residue.auth_seq_id 6 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DG _pdbx_struct_mod_residue.details ? # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE THE SEQUENCE OF THE PROTEIN HAS NOT YET BEEN DEPOSITED IN ANY REFERENCE SEQUENCE DATABASE. AUTHORS INFORMED THAT THE FOLLOWING MUTATIONS ARE PRESENT IN THE SEQUENCE: D144N, F347S, K357E. RESIDUES -2 TO 0 ARE CLONING ARTIFACTS. ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C DT 12 ? B DT 1 2 1 Y 1 A GLY -2 ? C GLY 1 3 1 Y 1 A SER -1 ? C SER 2 4 1 Y 1 A HIS 0 ? C HIS 3 5 1 Y 1 A MET 1 ? C MET 4 6 1 Y 1 A THR 2 ? C THR 5 7 1 Y 1 A ARG 3 ? C ARG 6 8 1 Y 1 A GLU 4 ? C GLU 7 9 1 Y 1 A THR 5 ? C THR 8 10 1 Y 1 A GLU 6 ? C GLU 9 11 1 Y 1 A ARG 7 ? C ARG 10 12 1 Y 1 A PHE 8 ? C PHE 11 13 1 Y 1 A GLY 275 ? C GLY 278 14 1 Y 1 A ALA 276 ? C ALA 279 15 1 Y 1 A GLU 288 ? C GLU 291 16 1 Y 1 A GLN 289 ? C GLN 292 17 1 Y 1 A TYR 290 ? C TYR 293 18 1 Y 1 A GLY 291 ? C GLY 294 19 1 Y 1 A GLY 361 ? C GLY 364 20 1 Y 1 A VAL 362 ? C VAL 365 21 1 Y 1 A ARG 363 ? C ARG 366 22 1 Y 1 A PRO 364 ? C PRO 367 23 1 Y 1 A PRO 365 ? C PRO 368 24 1 Y 1 A PRO 366 ? C PRO 369 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8OG OP3 O N N 1 8OG P P N N 2 8OG OP1 O N N 3 8OG OP2 O N N 4 8OG "O5'" O N N 5 8OG "C5'" C N N 6 8OG "C4'" C N R 7 8OG "O4'" O N N 8 8OG "C3'" C N S 9 8OG "O3'" O N N 10 8OG "C2'" C N N 11 8OG "C1'" C N R 12 8OG N9 N N N 13 8OG C8 C N N 14 8OG N7 N N N 15 8OG C5 C N N 16 8OG C6 C N N 17 8OG O6 O N N 18 8OG N1 N N N 19 8OG C2 C N N 20 8OG N2 N N N 21 8OG N3 N N N 22 8OG C4 C N N 23 8OG O8 O N N 24 8OG HOP3 H N N 25 8OG HOP2 H N N 26 8OG "H5'" H N N 27 8OG "H5''" H N N 28 8OG "H4'" H N N 29 8OG "H3'" H N N 30 8OG "HO3'" H N N 31 8OG "H2'" H N N 32 8OG "H2''" H N N 33 8OG "H1'" H N N 34 8OG H7 H N N 35 8OG H1 H N N 36 8OG H21 H N N 37 8OG H22 H N N 38 ADE N9 N Y N 39 ADE C8 C Y N 40 ADE N7 N Y N 41 ADE C5 C Y N 42 ADE C6 C Y N 43 ADE N6 N N N 44 ADE N1 N Y N 45 ADE C2 C Y N 46 ADE N3 N Y N 47 ADE C4 C Y N 48 ADE HN9 H N N 49 ADE H8 H N N 50 ADE HN61 H N N 51 ADE HN62 H N N 52 ADE H2 H N N 53 ALA N N N N 54 ALA CA C N S 55 ALA C C N N 56 ALA O O N N 57 ALA CB C N N 58 ALA OXT O N N 59 ALA H H N N 60 ALA H2 H N N 61 ALA HA H N N 62 ALA HB1 H N N 63 ALA HB2 H N N 64 ALA HB3 H N N 65 ALA HXT H N N 66 ARG N N N N 67 ARG CA C N S 68 ARG C C N N 69 ARG O O N N 70 ARG CB C N N 71 ARG CG C N N 72 ARG CD C N N 73 ARG NE N N N 74 ARG CZ C N N 75 ARG NH1 N N N 76 ARG NH2 N N N 77 ARG OXT O N N 78 ARG H H N N 79 ARG H2 H N N 80 ARG HA H N N 81 ARG HB2 H N N 82 ARG HB3 H N N 83 ARG HG2 H N N 84 ARG HG3 H N N 85 ARG HD2 H N N 86 ARG HD3 H N N 87 ARG HE H N N 88 ARG HH11 H N N 89 ARG HH12 H N N 90 ARG HH21 H N N 91 ARG HH22 H N N 92 ARG HXT H N N 93 ASN N N N N 94 ASN CA C N S 95 ASN C C N N 96 ASN O O N N 97 ASN CB C N N 98 ASN CG C N N 99 ASN OD1 O N N 100 ASN ND2 N N N 101 ASN OXT O N N 102 ASN H H N N 103 ASN H2 H N N 104 ASN HA H N N 105 ASN HB2 H N N 106 ASN HB3 H N N 107 ASN HD21 H N N 108 ASN HD22 H N N 109 ASN HXT H N N 110 ASP N N N N 111 ASP CA C N S 112 ASP C C N N 113 ASP O O N N 114 ASP CB C N N 115 ASP CG C N N 116 ASP OD1 O N N 117 ASP OD2 O N N 118 ASP OXT O N N 119 ASP H H N N 120 ASP H2 H N N 121 ASP HA H N N 122 ASP HB2 H N N 123 ASP HB3 H N N 124 ASP HD2 H N N 125 ASP HXT H N N 126 CA CA CA N N 127 CYS N N N N 128 CYS CA C N R 129 CYS C C N N 130 CYS O O N N 131 CYS CB C N N 132 CYS SG S N N 133 CYS OXT O N N 134 CYS H H N N 135 CYS H2 H N N 136 CYS HA H N N 137 CYS HB2 H N N 138 CYS HB3 H N N 139 CYS HG H N N 140 CYS HXT H N N 141 DA OP3 O N N 142 DA P P N N 143 DA OP1 O N N 144 DA OP2 O N N 145 DA "O5'" O N N 146 DA "C5'" C N N 147 DA "C4'" C N R 148 DA "O4'" O N N 149 DA "C3'" C N S 150 DA "O3'" O N N 151 DA "C2'" C N N 152 DA "C1'" C N R 153 DA N9 N Y N 154 DA C8 C Y N 155 DA N7 N Y N 156 DA C5 C Y N 157 DA C6 C Y N 158 DA N6 N N N 159 DA N1 N Y N 160 DA C2 C Y N 161 DA N3 N Y N 162 DA C4 C Y N 163 DA HOP3 H N N 164 DA HOP2 H N N 165 DA "H5'" H N N 166 DA "H5''" H N N 167 DA "H4'" H N N 168 DA "H3'" H N N 169 DA "HO3'" H N N 170 DA "H2'" H N N 171 DA "H2''" H N N 172 DA "H1'" H N N 173 DA H8 H N N 174 DA H61 H N N 175 DA H62 H N N 176 DA H2 H N N 177 DC OP3 O N N 178 DC P P N N 179 DC OP1 O N N 180 DC OP2 O N N 181 DC "O5'" O N N 182 DC "C5'" C N N 183 DC "C4'" C N R 184 DC "O4'" O N N 185 DC "C3'" C N S 186 DC "O3'" O N N 187 DC "C2'" C N N 188 DC "C1'" C N R 189 DC N1 N N N 190 DC C2 C N N 191 DC O2 O N N 192 DC N3 N N N 193 DC C4 C N N 194 DC N4 N N N 195 DC C5 C N N 196 DC C6 C N N 197 DC HOP3 H N N 198 DC HOP2 H N N 199 DC "H5'" H N N 200 DC "H5''" H N N 201 DC "H4'" H N N 202 DC "H3'" H N N 203 DC "HO3'" H N N 204 DC "H2'" H N N 205 DC "H2''" H N N 206 DC "H1'" H N N 207 DC H41 H N N 208 DC H42 H N N 209 DC H5 H N N 210 DC H6 H N N 211 DG OP3 O N N 212 DG P P N N 213 DG OP1 O N N 214 DG OP2 O N N 215 DG "O5'" O N N 216 DG "C5'" C N N 217 DG "C4'" C N R 218 DG "O4'" O N N 219 DG "C3'" C N S 220 DG "O3'" O N N 221 DG "C2'" C N N 222 DG "C1'" C N R 223 DG N9 N Y N 224 DG C8 C Y N 225 DG N7 N Y N 226 DG C5 C Y N 227 DG C6 C N N 228 DG O6 O N N 229 DG N1 N N N 230 DG C2 C N N 231 DG N2 N N N 232 DG N3 N N N 233 DG C4 C Y N 234 DG HOP3 H N N 235 DG HOP2 H N N 236 DG "H5'" H N N 237 DG "H5''" H N N 238 DG "H4'" H N N 239 DG "H3'" H N N 240 DG "HO3'" H N N 241 DG "H2'" H N N 242 DG "H2''" H N N 243 DG "H1'" H N N 244 DG H8 H N N 245 DG H1 H N N 246 DG H21 H N N 247 DG H22 H N N 248 DT OP3 O N N 249 DT P P N N 250 DT OP1 O N N 251 DT OP2 O N N 252 DT "O5'" O N N 253 DT "C5'" C N N 254 DT "C4'" C N R 255 DT "O4'" O N N 256 DT "C3'" C N S 257 DT "O3'" O N N 258 DT "C2'" C N N 259 DT "C1'" C N R 260 DT N1 N N N 261 DT C2 C N N 262 DT O2 O N N 263 DT N3 N N N 264 DT C4 C N N 265 DT O4 O N N 266 DT C5 C N N 267 DT C7 C N N 268 DT C6 C N N 269 DT HOP3 H N N 270 DT HOP2 H N N 271 DT "H5'" H N N 272 DT "H5''" H N N 273 DT "H4'" H N N 274 DT "H3'" H N N 275 DT "HO3'" H N N 276 DT "H2'" H N N 277 DT "H2''" H N N 278 DT "H1'" H N N 279 DT H3 H N N 280 DT H71 H N N 281 DT H72 H N N 282 DT H73 H N N 283 DT H6 H N N 284 GLN N N N N 285 GLN CA C N S 286 GLN C C N N 287 GLN O O N N 288 GLN CB C N N 289 GLN CG C N N 290 GLN CD C N N 291 GLN OE1 O N N 292 GLN NE2 N N N 293 GLN OXT O N N 294 GLN H H N N 295 GLN H2 H N N 296 GLN HA H N N 297 GLN HB2 H N N 298 GLN HB3 H N N 299 GLN HG2 H N N 300 GLN HG3 H N N 301 GLN HE21 H N N 302 GLN HE22 H N N 303 GLN HXT H N N 304 GLU N N N N 305 GLU CA C N S 306 GLU C C N N 307 GLU O O N N 308 GLU CB C N N 309 GLU CG C N N 310 GLU CD C N N 311 GLU OE1 O N N 312 GLU OE2 O N N 313 GLU OXT O N N 314 GLU H H N N 315 GLU H2 H N N 316 GLU HA H N N 317 GLU HB2 H N N 318 GLU HB3 H N N 319 GLU HG2 H N N 320 GLU HG3 H N N 321 GLU HE2 H N N 322 GLU HXT H N N 323 GLY N N N N 324 GLY CA C N N 325 GLY C C N N 326 GLY O O N N 327 GLY OXT O N N 328 GLY H H N N 329 GLY H2 H N N 330 GLY HA2 H N N 331 GLY HA3 H N N 332 GLY HXT H N N 333 HIS N N N N 334 HIS CA C N S 335 HIS C C N N 336 HIS O O N N 337 HIS CB C N N 338 HIS CG C Y N 339 HIS ND1 N Y N 340 HIS CD2 C Y N 341 HIS CE1 C Y N 342 HIS NE2 N Y N 343 HIS OXT O N N 344 HIS H H N N 345 HIS H2 H N N 346 HIS HA H N N 347 HIS HB2 H N N 348 HIS HB3 H N N 349 HIS HD1 H N N 350 HIS HD2 H N N 351 HIS HE1 H N N 352 HIS HE2 H N N 353 HIS HXT H N N 354 HOH O O N N 355 HOH H1 H N N 356 HOH H2 H N N 357 HPD P P N N 358 HPD "O5'" O N N 359 HPD O1P O N N 360 HPD O2P O N N 361 HPD O3P O N N 362 HPD "C5'" C N N 363 HPD "O4'" O N N 364 HPD "O3'" O N N 365 HPD "C1'" C N N 366 HPD "O1'" O N N 367 HPD "C3'" C N S 368 HPD "C4'" C N R 369 HPD "C2'" C N N 370 HPD HOP2 H N N 371 HPD HOP3 H N N 372 HPD "H5'1" H N N 373 HPD "H5'2" H N N 374 HPD "HO'4" H N N 375 HPD "HO'3" H N N 376 HPD "H1'1" H N N 377 HPD "H1'2" H N N 378 HPD "HO'1" H N N 379 HPD "H3'" H N N 380 HPD "H4'" H N N 381 HPD "H2'1" H N N 382 HPD "H2'2" H N N 383 ILE N N N N 384 ILE CA C N S 385 ILE C C N N 386 ILE O O N N 387 ILE CB C N S 388 ILE CG1 C N N 389 ILE CG2 C N N 390 ILE CD1 C N N 391 ILE OXT O N N 392 ILE H H N N 393 ILE H2 H N N 394 ILE HA H N N 395 ILE HB H N N 396 ILE HG12 H N N 397 ILE HG13 H N N 398 ILE HG21 H N N 399 ILE HG22 H N N 400 ILE HG23 H N N 401 ILE HD11 H N N 402 ILE HD12 H N N 403 ILE HD13 H N N 404 ILE HXT H N N 405 LEU N N N N 406 LEU CA C N S 407 LEU C C N N 408 LEU O O N N 409 LEU CB C N N 410 LEU CG C N N 411 LEU CD1 C N N 412 LEU CD2 C N N 413 LEU OXT O N N 414 LEU H H N N 415 LEU H2 H N N 416 LEU HA H N N 417 LEU HB2 H N N 418 LEU HB3 H N N 419 LEU HG H N N 420 LEU HD11 H N N 421 LEU HD12 H N N 422 LEU HD13 H N N 423 LEU HD21 H N N 424 LEU HD22 H N N 425 LEU HD23 H N N 426 LEU HXT H N N 427 LYS N N N N 428 LYS CA C N S 429 LYS C C N N 430 LYS O O N N 431 LYS CB C N N 432 LYS CG C N N 433 LYS CD C N N 434 LYS CE C N N 435 LYS NZ N N N 436 LYS OXT O N N 437 LYS H H N N 438 LYS H2 H N N 439 LYS HA H N N 440 LYS HB2 H N N 441 LYS HB3 H N N 442 LYS HG2 H N N 443 LYS HG3 H N N 444 LYS HD2 H N N 445 LYS HD3 H N N 446 LYS HE2 H N N 447 LYS HE3 H N N 448 LYS HZ1 H N N 449 LYS HZ2 H N N 450 LYS HZ3 H N N 451 LYS HXT H N N 452 MET N N N N 453 MET CA C N S 454 MET C C N N 455 MET O O N N 456 MET CB C N N 457 MET CG C N N 458 MET SD S N N 459 MET CE C N N 460 MET OXT O N N 461 MET H H N N 462 MET H2 H N N 463 MET HA H N N 464 MET HB2 H N N 465 MET HB3 H N N 466 MET HG2 H N N 467 MET HG3 H N N 468 MET HE1 H N N 469 MET HE2 H N N 470 MET HE3 H N N 471 MET HXT H N N 472 PHE N N N N 473 PHE CA C N S 474 PHE C C N N 475 PHE O O N N 476 PHE CB C N N 477 PHE CG C Y N 478 PHE CD1 C Y N 479 PHE CD2 C Y N 480 PHE CE1 C Y N 481 PHE CE2 C Y N 482 PHE CZ C Y N 483 PHE OXT O N N 484 PHE H H N N 485 PHE H2 H N N 486 PHE HA H N N 487 PHE HB2 H N N 488 PHE HB3 H N N 489 PHE HD1 H N N 490 PHE HD2 H N N 491 PHE HE1 H N N 492 PHE HE2 H N N 493 PHE HZ H N N 494 PHE HXT H N N 495 PRO N N N N 496 PRO CA C N S 497 PRO C C N N 498 PRO O O N N 499 PRO CB C N N 500 PRO CG C N N 501 PRO CD C N N 502 PRO OXT O N N 503 PRO H H N N 504 PRO HA H N N 505 PRO HB2 H N N 506 PRO HB3 H N N 507 PRO HG2 H N N 508 PRO HG3 H N N 509 PRO HD2 H N N 510 PRO HD3 H N N 511 PRO HXT H N N 512 SER N N N N 513 SER CA C N S 514 SER C C N N 515 SER O O N N 516 SER CB C N N 517 SER OG O N N 518 SER OXT O N N 519 SER H H N N 520 SER H2 H N N 521 SER HA H N N 522 SER HB2 H N N 523 SER HB3 H N N 524 SER HG H N N 525 SER HXT H N N 526 SF4 FE1 FE N N 527 SF4 FE2 FE N N 528 SF4 FE3 FE N N 529 SF4 FE4 FE N N 530 SF4 S1 S N N 531 SF4 S2 S N N 532 SF4 S3 S N N 533 SF4 S4 S N N 534 THR N N N N 535 THR CA C N S 536 THR C C N N 537 THR O O N N 538 THR CB C N R 539 THR OG1 O N N 540 THR CG2 C N N 541 THR OXT O N N 542 THR H H N N 543 THR H2 H N N 544 THR HA H N N 545 THR HB H N N 546 THR HG1 H N N 547 THR HG21 H N N 548 THR HG22 H N N 549 THR HG23 H N N 550 THR HXT H N N 551 TRP N N N N 552 TRP CA C N S 553 TRP C C N N 554 TRP O O N N 555 TRP CB C N N 556 TRP CG C Y N 557 TRP CD1 C Y N 558 TRP CD2 C Y N 559 TRP NE1 N Y N 560 TRP CE2 C Y N 561 TRP CE3 C Y N 562 TRP CZ2 C Y N 563 TRP CZ3 C Y N 564 TRP CH2 C Y N 565 TRP OXT O N N 566 TRP H H N N 567 TRP H2 H N N 568 TRP HA H N N 569 TRP HB2 H N N 570 TRP HB3 H N N 571 TRP HD1 H N N 572 TRP HE1 H N N 573 TRP HE3 H N N 574 TRP HZ2 H N N 575 TRP HZ3 H N N 576 TRP HH2 H N N 577 TRP HXT H N N 578 TYR N N N N 579 TYR CA C N S 580 TYR C C N N 581 TYR O O N N 582 TYR CB C N N 583 TYR CG C Y N 584 TYR CD1 C Y N 585 TYR CD2 C Y N 586 TYR CE1 C Y N 587 TYR CE2 C Y N 588 TYR CZ C Y N 589 TYR OH O N N 590 TYR OXT O N N 591 TYR H H N N 592 TYR H2 H N N 593 TYR HA H N N 594 TYR HB2 H N N 595 TYR HB3 H N N 596 TYR HD1 H N N 597 TYR HD2 H N N 598 TYR HE1 H N N 599 TYR HE2 H N N 600 TYR HH H N N 601 TYR HXT H N N 602 VAL N N N N 603 VAL CA C N S 604 VAL C C N N 605 VAL O O N N 606 VAL CB C N N 607 VAL CG1 C N N 608 VAL CG2 C N N 609 VAL OXT O N N 610 VAL H H N N 611 VAL H2 H N N 612 VAL HA H N N 613 VAL HB H N N 614 VAL HG11 H N N 615 VAL HG12 H N N 616 VAL HG13 H N N 617 VAL HG21 H N N 618 VAL HG22 H N N 619 VAL HG23 H N N 620 VAL HXT H N N 621 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8OG OP3 P sing N N 1 8OG OP3 HOP3 sing N N 2 8OG P OP1 doub N N 3 8OG P OP2 sing N N 4 8OG P "O5'" sing N N 5 8OG OP2 HOP2 sing N N 6 8OG "O5'" "C5'" sing N N 7 8OG "C5'" "C4'" sing N N 8 8OG "C5'" "H5'" sing N N 9 8OG "C5'" "H5''" sing N N 10 8OG "C4'" "O4'" sing N N 11 8OG "C4'" "C3'" sing N N 12 8OG "C4'" "H4'" sing N N 13 8OG "O4'" "C1'" sing N N 14 8OG "C3'" "O3'" sing N N 15 8OG "C3'" "C2'" sing N N 16 8OG "C3'" "H3'" sing N N 17 8OG "O3'" "HO3'" sing N N 18 8OG "C2'" "C1'" sing N N 19 8OG "C2'" "H2'" sing N N 20 8OG "C2'" "H2''" sing N N 21 8OG "C1'" N9 sing N N 22 8OG "C1'" "H1'" sing N N 23 8OG N9 C8 sing N N 24 8OG N9 C4 sing N N 25 8OG C8 N7 sing N N 26 8OG C8 O8 doub N N 27 8OG N7 C5 sing N N 28 8OG N7 H7 sing N N 29 8OG C5 C6 sing N N 30 8OG C5 C4 doub N N 31 8OG C6 O6 doub N N 32 8OG C6 N1 sing N N 33 8OG N1 C2 sing N N 34 8OG N1 H1 sing N N 35 8OG C2 N2 sing N N 36 8OG C2 N3 doub N N 37 8OG N2 H21 sing N N 38 8OG N2 H22 sing N N 39 8OG N3 C4 sing N N 40 ADE N9 C8 sing Y N 41 ADE N9 C4 sing Y N 42 ADE N9 HN9 sing N N 43 ADE C8 N7 doub Y N 44 ADE C8 H8 sing N N 45 ADE N7 C5 sing Y N 46 ADE C5 C6 sing Y N 47 ADE C5 C4 doub Y N 48 ADE C6 N6 sing N N 49 ADE C6 N1 doub Y N 50 ADE N6 HN61 sing N N 51 ADE N6 HN62 sing N N 52 ADE N1 C2 sing Y N 53 ADE C2 N3 doub Y N 54 ADE C2 H2 sing N N 55 ADE N3 C4 sing Y N 56 ALA N CA sing N N 57 ALA N H sing N N 58 ALA N H2 sing N N 59 ALA CA C sing N N 60 ALA CA CB sing N N 61 ALA CA HA sing N N 62 ALA C O doub N N 63 ALA C OXT sing N N 64 ALA CB HB1 sing N N 65 ALA CB HB2 sing N N 66 ALA CB HB3 sing N N 67 ALA OXT HXT sing N N 68 ARG N CA sing N N 69 ARG N H sing N N 70 ARG N H2 sing N N 71 ARG CA C sing N N 72 ARG CA CB sing N N 73 ARG CA HA sing N N 74 ARG C O doub N N 75 ARG C OXT sing N N 76 ARG CB CG sing N N 77 ARG CB HB2 sing N N 78 ARG CB HB3 sing N N 79 ARG CG CD sing N N 80 ARG CG HG2 sing N N 81 ARG CG HG3 sing N N 82 ARG CD NE sing N N 83 ARG CD HD2 sing N N 84 ARG CD HD3 sing N N 85 ARG NE CZ sing N N 86 ARG NE HE sing N N 87 ARG CZ NH1 sing N N 88 ARG CZ NH2 doub N N 89 ARG NH1 HH11 sing N N 90 ARG NH1 HH12 sing N N 91 ARG NH2 HH21 sing N N 92 ARG NH2 HH22 sing N N 93 ARG OXT HXT sing N N 94 ASN N CA sing N N 95 ASN N H sing N N 96 ASN N H2 sing N N 97 ASN CA C sing N N 98 ASN CA CB sing N N 99 ASN CA HA sing N N 100 ASN C O doub N N 101 ASN C OXT sing N N 102 ASN CB CG sing N N 103 ASN CB HB2 sing N N 104 ASN CB HB3 sing N N 105 ASN CG OD1 doub N N 106 ASN CG ND2 sing N N 107 ASN ND2 HD21 sing N N 108 ASN ND2 HD22 sing N N 109 ASN OXT HXT sing N N 110 ASP N CA sing N N 111 ASP N H sing N N 112 ASP N H2 sing N N 113 ASP CA C sing N N 114 ASP CA CB sing N N 115 ASP CA HA sing N N 116 ASP C O doub N N 117 ASP C OXT sing N N 118 ASP CB CG sing N N 119 ASP CB HB2 sing N N 120 ASP CB HB3 sing N N 121 ASP CG OD1 doub N N 122 ASP CG OD2 sing N N 123 ASP OD2 HD2 sing N N 124 ASP OXT HXT sing N N 125 CYS N CA sing N N 126 CYS N H sing N N 127 CYS N H2 sing N N 128 CYS CA C sing N N 129 CYS CA CB sing N N 130 CYS CA HA sing N N 131 CYS C O doub N N 132 CYS C OXT sing N N 133 CYS CB SG sing N N 134 CYS CB HB2 sing N N 135 CYS CB HB3 sing N N 136 CYS SG HG sing N N 137 CYS OXT HXT sing N N 138 DA OP3 P sing N N 139 DA OP3 HOP3 sing N N 140 DA P OP1 doub N N 141 DA P OP2 sing N N 142 DA P "O5'" sing N N 143 DA OP2 HOP2 sing N N 144 DA "O5'" "C5'" sing N N 145 DA "C5'" "C4'" sing N N 146 DA "C5'" "H5'" sing N N 147 DA "C5'" "H5''" sing N N 148 DA "C4'" "O4'" sing N N 149 DA "C4'" "C3'" sing N N 150 DA "C4'" "H4'" sing N N 151 DA "O4'" "C1'" sing N N 152 DA "C3'" "O3'" sing N N 153 DA "C3'" "C2'" sing N N 154 DA "C3'" "H3'" sing N N 155 DA "O3'" "HO3'" sing N N 156 DA "C2'" "C1'" sing N N 157 DA "C2'" "H2'" sing N N 158 DA "C2'" "H2''" sing N N 159 DA "C1'" N9 sing N N 160 DA "C1'" "H1'" sing N N 161 DA N9 C8 sing Y N 162 DA N9 C4 sing Y N 163 DA C8 N7 doub Y N 164 DA C8 H8 sing N N 165 DA N7 C5 sing Y N 166 DA C5 C6 sing Y N 167 DA C5 C4 doub Y N 168 DA C6 N6 sing N N 169 DA C6 N1 doub Y N 170 DA N6 H61 sing N N 171 DA N6 H62 sing N N 172 DA N1 C2 sing Y N 173 DA C2 N3 doub Y N 174 DA C2 H2 sing N N 175 DA N3 C4 sing Y N 176 DC OP3 P sing N N 177 DC OP3 HOP3 sing N N 178 DC P OP1 doub N N 179 DC P OP2 sing N N 180 DC P "O5'" sing N N 181 DC OP2 HOP2 sing N N 182 DC "O5'" "C5'" sing N N 183 DC "C5'" "C4'" sing N N 184 DC "C5'" "H5'" sing N N 185 DC "C5'" "H5''" sing N N 186 DC "C4'" "O4'" sing N N 187 DC "C4'" "C3'" sing N N 188 DC "C4'" "H4'" sing N N 189 DC "O4'" "C1'" sing N N 190 DC "C3'" "O3'" sing N N 191 DC "C3'" "C2'" sing N N 192 DC "C3'" "H3'" sing N N 193 DC "O3'" "HO3'" sing N N 194 DC "C2'" "C1'" sing N N 195 DC "C2'" "H2'" sing N N 196 DC "C2'" "H2''" sing N N 197 DC "C1'" N1 sing N N 198 DC "C1'" "H1'" sing N N 199 DC N1 C2 sing N N 200 DC N1 C6 sing N N 201 DC C2 O2 doub N N 202 DC C2 N3 sing N N 203 DC N3 C4 doub N N 204 DC C4 N4 sing N N 205 DC C4 C5 sing N N 206 DC N4 H41 sing N N 207 DC N4 H42 sing N N 208 DC C5 C6 doub N N 209 DC C5 H5 sing N N 210 DC C6 H6 sing N N 211 DG OP3 P sing N N 212 DG OP3 HOP3 sing N N 213 DG P OP1 doub N N 214 DG P OP2 sing N N 215 DG P "O5'" sing N N 216 DG OP2 HOP2 sing N N 217 DG "O5'" "C5'" sing N N 218 DG "C5'" "C4'" sing N N 219 DG "C5'" "H5'" sing N N 220 DG "C5'" "H5''" sing N N 221 DG "C4'" "O4'" sing N N 222 DG "C4'" "C3'" sing N N 223 DG "C4'" "H4'" sing N N 224 DG "O4'" "C1'" sing N N 225 DG "C3'" "O3'" sing N N 226 DG "C3'" "C2'" sing N N 227 DG "C3'" "H3'" sing N N 228 DG "O3'" "HO3'" sing N N 229 DG "C2'" "C1'" sing N N 230 DG "C2'" "H2'" sing N N 231 DG "C2'" "H2''" sing N N 232 DG "C1'" N9 sing N N 233 DG "C1'" "H1'" sing N N 234 DG N9 C8 sing Y N 235 DG N9 C4 sing Y N 236 DG C8 N7 doub Y N 237 DG C8 H8 sing N N 238 DG N7 C5 sing Y N 239 DG C5 C6 sing N N 240 DG C5 C4 doub Y N 241 DG C6 O6 doub N N 242 DG C6 N1 sing N N 243 DG N1 C2 sing N N 244 DG N1 H1 sing N N 245 DG C2 N2 sing N N 246 DG C2 N3 doub N N 247 DG N2 H21 sing N N 248 DG N2 H22 sing N N 249 DG N3 C4 sing N N 250 DT OP3 P sing N N 251 DT OP3 HOP3 sing N N 252 DT P OP1 doub N N 253 DT P OP2 sing N N 254 DT P "O5'" sing N N 255 DT OP2 HOP2 sing N N 256 DT "O5'" "C5'" sing N N 257 DT "C5'" "C4'" sing N N 258 DT "C5'" "H5'" sing N N 259 DT "C5'" "H5''" sing N N 260 DT "C4'" "O4'" sing N N 261 DT "C4'" "C3'" sing N N 262 DT "C4'" "H4'" sing N N 263 DT "O4'" "C1'" sing N N 264 DT "C3'" "O3'" sing N N 265 DT "C3'" "C2'" sing N N 266 DT "C3'" "H3'" sing N N 267 DT "O3'" "HO3'" sing N N 268 DT "C2'" "C1'" sing N N 269 DT "C2'" "H2'" sing N N 270 DT "C2'" "H2''" sing N N 271 DT "C1'" N1 sing N N 272 DT "C1'" "H1'" sing N N 273 DT N1 C2 sing N N 274 DT N1 C6 sing N N 275 DT C2 O2 doub N N 276 DT C2 N3 sing N N 277 DT N3 C4 sing N N 278 DT N3 H3 sing N N 279 DT C4 O4 doub N N 280 DT C4 C5 sing N N 281 DT C5 C7 sing N N 282 DT C5 C6 doub N N 283 DT C7 H71 sing N N 284 DT C7 H72 sing N N 285 DT C7 H73 sing N N 286 DT C6 H6 sing N N 287 GLN N CA sing N N 288 GLN N H sing N N 289 GLN N H2 sing N N 290 GLN CA C sing N N 291 GLN CA CB sing N N 292 GLN CA HA sing N N 293 GLN C O doub N N 294 GLN C OXT sing N N 295 GLN CB CG sing N N 296 GLN CB HB2 sing N N 297 GLN CB HB3 sing N N 298 GLN CG CD sing N N 299 GLN CG HG2 sing N N 300 GLN CG HG3 sing N N 301 GLN CD OE1 doub N N 302 GLN CD NE2 sing N N 303 GLN NE2 HE21 sing N N 304 GLN NE2 HE22 sing N N 305 GLN OXT HXT sing N N 306 GLU N CA sing N N 307 GLU N H sing N N 308 GLU N H2 sing N N 309 GLU CA C sing N N 310 GLU CA CB sing N N 311 GLU CA HA sing N N 312 GLU C O doub N N 313 GLU C OXT sing N N 314 GLU CB CG sing N N 315 GLU CB HB2 sing N N 316 GLU CB HB3 sing N N 317 GLU CG CD sing N N 318 GLU CG HG2 sing N N 319 GLU CG HG3 sing N N 320 GLU CD OE1 doub N N 321 GLU CD OE2 sing N N 322 GLU OE2 HE2 sing N N 323 GLU OXT HXT sing N N 324 GLY N CA sing N N 325 GLY N H sing N N 326 GLY N H2 sing N N 327 GLY CA C sing N N 328 GLY CA HA2 sing N N 329 GLY CA HA3 sing N N 330 GLY C O doub N N 331 GLY C OXT sing N N 332 GLY OXT HXT sing N N 333 HIS N CA sing N N 334 HIS N H sing N N 335 HIS N H2 sing N N 336 HIS CA C sing N N 337 HIS CA CB sing N N 338 HIS CA HA sing N N 339 HIS C O doub N N 340 HIS C OXT sing N N 341 HIS CB CG sing N N 342 HIS CB HB2 sing N N 343 HIS CB HB3 sing N N 344 HIS CG ND1 sing Y N 345 HIS CG CD2 doub Y N 346 HIS ND1 CE1 doub Y N 347 HIS ND1 HD1 sing N N 348 HIS CD2 NE2 sing Y N 349 HIS CD2 HD2 sing N N 350 HIS CE1 NE2 sing Y N 351 HIS CE1 HE1 sing N N 352 HIS NE2 HE2 sing N N 353 HIS OXT HXT sing N N 354 HOH O H1 sing N N 355 HOH O H2 sing N N 356 HPD P "O5'" sing N N 357 HPD P O1P doub N N 358 HPD P O2P sing N N 359 HPD P O3P sing N N 360 HPD "O5'" "C5'" sing N N 361 HPD O2P HOP2 sing N N 362 HPD O3P HOP3 sing N N 363 HPD "C5'" "C4'" sing N N 364 HPD "C5'" "H5'1" sing N N 365 HPD "C5'" "H5'2" sing N N 366 HPD "O4'" "C4'" sing N N 367 HPD "O4'" "HO'4" sing N N 368 HPD "O3'" "C3'" sing N N 369 HPD "O3'" "HO'3" sing N N 370 HPD "C1'" "O1'" sing N N 371 HPD "C1'" "C2'" sing N N 372 HPD "C1'" "H1'1" sing N N 373 HPD "C1'" "H1'2" sing N N 374 HPD "O1'" "HO'1" sing N N 375 HPD "C3'" "C4'" sing N N 376 HPD "C3'" "C2'" sing N N 377 HPD "C3'" "H3'" sing N N 378 HPD "C4'" "H4'" sing N N 379 HPD "C2'" "H2'1" sing N N 380 HPD "C2'" "H2'2" sing N N 381 ILE N CA sing N N 382 ILE N H sing N N 383 ILE N H2 sing N N 384 ILE CA C sing N N 385 ILE CA CB sing N N 386 ILE CA HA sing N N 387 ILE C O doub N N 388 ILE C OXT sing N N 389 ILE CB CG1 sing N N 390 ILE CB CG2 sing N N 391 ILE CB HB sing N N 392 ILE CG1 CD1 sing N N 393 ILE CG1 HG12 sing N N 394 ILE CG1 HG13 sing N N 395 ILE CG2 HG21 sing N N 396 ILE CG2 HG22 sing N N 397 ILE CG2 HG23 sing N N 398 ILE CD1 HD11 sing N N 399 ILE CD1 HD12 sing N N 400 ILE CD1 HD13 sing N N 401 ILE OXT HXT sing N N 402 LEU N CA sing N N 403 LEU N H sing N N 404 LEU N H2 sing N N 405 LEU CA C sing N N 406 LEU CA CB sing N N 407 LEU CA HA sing N N 408 LEU C O doub N N 409 LEU C OXT sing N N 410 LEU CB CG sing N N 411 LEU CB HB2 sing N N 412 LEU CB HB3 sing N N 413 LEU CG CD1 sing N N 414 LEU CG CD2 sing N N 415 LEU CG HG sing N N 416 LEU CD1 HD11 sing N N 417 LEU CD1 HD12 sing N N 418 LEU CD1 HD13 sing N N 419 LEU CD2 HD21 sing N N 420 LEU CD2 HD22 sing N N 421 LEU CD2 HD23 sing N N 422 LEU OXT HXT sing N N 423 LYS N CA sing N N 424 LYS N H sing N N 425 LYS N H2 sing N N 426 LYS CA C sing N N 427 LYS CA CB sing N N 428 LYS CA HA sing N N 429 LYS C O doub N N 430 LYS C OXT sing N N 431 LYS CB CG sing N N 432 LYS CB HB2 sing N N 433 LYS CB HB3 sing N N 434 LYS CG CD sing N N 435 LYS CG HG2 sing N N 436 LYS CG HG3 sing N N 437 LYS CD CE sing N N 438 LYS CD HD2 sing N N 439 LYS CD HD3 sing N N 440 LYS CE NZ sing N N 441 LYS CE HE2 sing N N 442 LYS CE HE3 sing N N 443 LYS NZ HZ1 sing N N 444 LYS NZ HZ2 sing N N 445 LYS NZ HZ3 sing N N 446 LYS OXT HXT sing N N 447 MET N CA sing N N 448 MET N H sing N N 449 MET N H2 sing N N 450 MET CA C sing N N 451 MET CA CB sing N N 452 MET CA HA sing N N 453 MET C O doub N N 454 MET C OXT sing N N 455 MET CB CG sing N N 456 MET CB HB2 sing N N 457 MET CB HB3 sing N N 458 MET CG SD sing N N 459 MET CG HG2 sing N N 460 MET CG HG3 sing N N 461 MET SD CE sing N N 462 MET CE HE1 sing N N 463 MET CE HE2 sing N N 464 MET CE HE3 sing N N 465 MET OXT HXT sing N N 466 PHE N CA sing N N 467 PHE N H sing N N 468 PHE N H2 sing N N 469 PHE CA C sing N N 470 PHE CA CB sing N N 471 PHE CA HA sing N N 472 PHE C O doub N N 473 PHE C OXT sing N N 474 PHE CB CG sing N N 475 PHE CB HB2 sing N N 476 PHE CB HB3 sing N N 477 PHE CG CD1 doub Y N 478 PHE CG CD2 sing Y N 479 PHE CD1 CE1 sing Y N 480 PHE CD1 HD1 sing N N 481 PHE CD2 CE2 doub Y N 482 PHE CD2 HD2 sing N N 483 PHE CE1 CZ doub Y N 484 PHE CE1 HE1 sing N N 485 PHE CE2 CZ sing Y N 486 PHE CE2 HE2 sing N N 487 PHE CZ HZ sing N N 488 PHE OXT HXT sing N N 489 PRO N CA sing N N 490 PRO N CD sing N N 491 PRO N H sing N N 492 PRO CA C sing N N 493 PRO CA CB sing N N 494 PRO CA HA sing N N 495 PRO C O doub N N 496 PRO C OXT sing N N 497 PRO CB CG sing N N 498 PRO CB HB2 sing N N 499 PRO CB HB3 sing N N 500 PRO CG CD sing N N 501 PRO CG HG2 sing N N 502 PRO CG HG3 sing N N 503 PRO CD HD2 sing N N 504 PRO CD HD3 sing N N 505 PRO OXT HXT sing N N 506 SER N CA sing N N 507 SER N H sing N N 508 SER N H2 sing N N 509 SER CA C sing N N 510 SER CA CB sing N N 511 SER CA HA sing N N 512 SER C O doub N N 513 SER C OXT sing N N 514 SER CB OG sing N N 515 SER CB HB2 sing N N 516 SER CB HB3 sing N N 517 SER OG HG sing N N 518 SER OXT HXT sing N N 519 SF4 FE1 S2 sing N N 520 SF4 FE1 S3 sing N N 521 SF4 FE1 S4 sing N N 522 SF4 FE2 S1 sing N N 523 SF4 FE2 S3 sing N N 524 SF4 FE2 S4 sing N N 525 SF4 FE3 S1 sing N N 526 SF4 FE3 S2 sing N N 527 SF4 FE3 S4 sing N N 528 SF4 FE4 S1 sing N N 529 SF4 FE4 S2 sing N N 530 SF4 FE4 S3 sing N N 531 THR N CA sing N N 532 THR N H sing N N 533 THR N H2 sing N N 534 THR CA C sing N N 535 THR CA CB sing N N 536 THR CA HA sing N N 537 THR C O doub N N 538 THR C OXT sing N N 539 THR CB OG1 sing N N 540 THR CB CG2 sing N N 541 THR CB HB sing N N 542 THR OG1 HG1 sing N N 543 THR CG2 HG21 sing N N 544 THR CG2 HG22 sing N N 545 THR CG2 HG23 sing N N 546 THR OXT HXT sing N N 547 TRP N CA sing N N 548 TRP N H sing N N 549 TRP N H2 sing N N 550 TRP CA C sing N N 551 TRP CA CB sing N N 552 TRP CA HA sing N N 553 TRP C O doub N N 554 TRP C OXT sing N N 555 TRP CB CG sing N N 556 TRP CB HB2 sing N N 557 TRP CB HB3 sing N N 558 TRP CG CD1 doub Y N 559 TRP CG CD2 sing Y N 560 TRP CD1 NE1 sing Y N 561 TRP CD1 HD1 sing N N 562 TRP CD2 CE2 doub Y N 563 TRP CD2 CE3 sing Y N 564 TRP NE1 CE2 sing Y N 565 TRP NE1 HE1 sing N N 566 TRP CE2 CZ2 sing Y N 567 TRP CE3 CZ3 doub Y N 568 TRP CE3 HE3 sing N N 569 TRP CZ2 CH2 doub Y N 570 TRP CZ2 HZ2 sing N N 571 TRP CZ3 CH2 sing Y N 572 TRP CZ3 HZ3 sing N N 573 TRP CH2 HH2 sing N N 574 TRP OXT HXT sing N N 575 TYR N CA sing N N 576 TYR N H sing N N 577 TYR N H2 sing N N 578 TYR CA C sing N N 579 TYR CA CB sing N N 580 TYR CA HA sing N N 581 TYR C O doub N N 582 TYR C OXT sing N N 583 TYR CB CG sing N N 584 TYR CB HB2 sing N N 585 TYR CB HB3 sing N N 586 TYR CG CD1 doub Y N 587 TYR CG CD2 sing Y N 588 TYR CD1 CE1 sing Y N 589 TYR CD1 HD1 sing N N 590 TYR CD2 CE2 doub Y N 591 TYR CD2 HD2 sing N N 592 TYR CE1 CZ doub Y N 593 TYR CE1 HE1 sing N N 594 TYR CE2 CZ sing Y N 595 TYR CE2 HE2 sing N N 596 TYR CZ OH sing N N 597 TYR OH HH sing N N 598 TYR OXT HXT sing N N 599 VAL N CA sing N N 600 VAL N H sing N N 601 VAL N H2 sing N N 602 VAL CA C sing N N 603 VAL CA CB sing N N 604 VAL CA HA sing N N 605 VAL C O doub N N 606 VAL C OXT sing N N 607 VAL CB CG1 sing N N 608 VAL CB CG2 sing N N 609 VAL CB HB sing N N 610 VAL CG1 HG11 sing N N 611 VAL CG1 HG12 sing N N 612 VAL CG1 HG13 sing N N 613 VAL CG2 HG21 sing N N 614 VAL CG2 HG22 sing N N 615 VAL CG2 HG23 sing N N 616 VAL OXT HXT sing N N 617 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1VRL 'double helix' 1VRL 'b-form double helix' 1VRL 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 2 1_555 B DT 11 1_555 0.203 -0.226 -0.121 -0.605 -12.825 6.460 1 B_DA2:DT22_C B 2 ? C 22 ? 20 1 1 A DG 3 1_555 B DC 10 1_555 0.119 0.067 0.054 0.188 -8.180 2.436 2 B_DG3:DC21_C B 3 ? C 21 ? 19 1 1 A DA 4 1_555 B DT 9 1_555 0.076 -0.092 -0.011 0.121 -9.047 -1.233 3 B_DA4:DT20_C B 4 ? C 20 ? 20 1 1 A DC 5 1_555 B DG 8 1_555 0.677 -0.254 -0.385 15.704 6.864 -2.886 4 B_DC5:DG19_C B 5 ? C 19 ? 19 1 1 A DT 7 1_555 B DA 6 1_555 -0.095 -0.780 -0.650 -21.006 22.849 -175.786 5 B_DT7:DA17_C B 7 ? C 17 ? ? 2 1 A DG 8 1_555 B DC 5 1_555 -0.002 -0.276 -0.497 -9.737 0.848 -4.501 6 B_DG8:DC16_C B 8 ? C 16 ? 19 1 1 A DG 9 1_555 B DC 4 1_555 0.475 -0.065 -0.283 5.237 -5.659 -1.488 7 B_DG9:DC15_C B 9 ? C 15 ? 19 1 1 A DA 10 1_555 B DT 3 1_555 -0.246 -0.202 0.169 8.416 -6.450 -4.972 8 B_DA10:DT14_C B 10 ? C 14 ? 20 1 1 A DC 11 1_555 B DG 2 1_555 -0.190 0.063 -0.738 26.803 -7.138 4.337 9 B_DC11:DG13_C B 11 ? C 13 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 2 1_555 B DT 11 1_555 A DG 3 1_555 B DC 10 1_555 -1.011 0.172 3.167 -5.826 1.729 34.751 0.030 0.810 3.293 2.868 9.663 35.262 1 BB_DA2DG3:DC21DT22_CC B 2 ? C 22 ? B 3 ? C 21 ? 1 A DG 3 1_555 B DC 10 1_555 A DA 4 1_555 B DT 9 1_555 -0.232 -0.371 3.248 0.625 0.335 36.923 -0.631 0.450 3.241 0.529 -0.986 36.930 2 BB_DG3DA4:DT20DC21_CC B 3 ? C 21 ? B 4 ? C 20 ? 1 A DA 4 1_555 B DT 9 1_555 A DC 5 1_555 B DG 8 1_555 0.539 -0.196 2.933 3.486 4.804 27.747 -1.399 -0.374 2.903 9.875 -7.165 28.362 3 BB_DA4DC5:DG19DT20_CC B 4 ? C 20 ? B 5 ? C 19 ? 1 A DT 7 1_555 B DA 6 1_555 A DG 8 1_555 B DC 5 1_555 0.291 0.189 3.198 0.101 6.872 -60.158 -0.513 0.293 3.161 -6.831 0.100 -60.513 4 BB_DT7DG8:DC16DA17_CC B 7 ? C 17 ? B 8 ? C 16 ? 1 A DG 8 1_555 B DC 5 1_555 A DG 9 1_555 B DC 4 1_555 -0.456 -0.009 2.983 -2.069 2.772 32.508 -0.456 0.482 2.995 4.935 3.684 32.687 5 BB_DG8DG9:DC15DC16_CC B 8 ? C 16 ? B 9 ? C 15 ? 1 A DG 9 1_555 B DC 4 1_555 A DA 10 1_555 B DT 3 1_555 -0.103 -0.192 3.171 -3.905 1.490 32.969 -0.577 -0.453 3.150 2.612 6.847 33.226 6 BB_DG9DA10:DT14DC15_CC B 9 ? C 15 ? B 10 ? C 14 ? 1 A DA 10 1_555 B DT 3 1_555 A DC 11 1_555 B DG 2 1_555 0.943 -0.470 2.935 8.268 3.788 33.587 -1.322 -0.411 3.007 6.411 -13.991 34.762 7 BB_DA10DC11:DG13DT14_CC B 10 ? C 14 ? B 11 ? C 13 ? # _atom_sites.entry_id 1VRL _atom_sites.fract_transf_matrix[1][1] 0.026332 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011665 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007060 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA FE N O P S # loop_