data_1VZL # _entry.id 1VZL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1VZL PDBE EBI-20045 WWPDB D_1290020045 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2006-04-06 _pdbx_database_PDB_obs_spr.pdb_id 2CCN _pdbx_database_PDB_obs_spr.replace_pdb_id 1VZL _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1M6T unspecified 'CRYSTAL STRUCTURE OF B562RIL, A REDESIGNED FOUR HELIX BUNDLE' PDB 1UNT unspecified 'STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES' PDB 1UNU unspecified 'STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES' PDB 1UNV unspecified 'STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES' PDB 1UNW unspecified 'STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES' PDB 1UNX unspecified 'STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES' PDB 1UNY unspecified 'STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES' PDB 1UNZ unspecified 'STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES' PDB 1UO0 unspecified 'STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES' PDB 1UO1 unspecified 'STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES' PDB 1UO2 unspecified 'STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES' PDB 1UO3 unspecified 'STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES' PDB 1UO4 unspecified 'STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES' PDB 1UO5 unspecified 'STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES' PDB 4HB1 unspecified 'A DESIGNED FOUR HELIX BUNDLE PROTEIN.' PDB 1CE9 unspecified 'HELIX CAPPING IN THE GCN4 LEUCINE ZIPPER' PDB 1DGC unspecified 'GCN4 LEUCINE ZIPPER COMPLEXED WITH SPECIFIC ATF/CREB SITE DEOXYRIBONUCLEIC ACID' PDB 1ENV unspecified 'ATOMIC STRUCTURE OF THE ECTODOMAIN FROM HIV -1 GP41' PDB 1FAV unspecified 'THE STRUCTURE OF AN HIV-1 SPECIFIC CELL ENTRY INHIBITOR INCOMPLEX WITH THE HIV-1 GP41 TRIMERIC CORE' PDB 1GCL unspecified 'GCN4 LEUCINE ZIPPER CORE MUTANT P-LI' PDB 1GCM unspecified 'GCN4 LEUCINE ZIPPER CORE MUTANT P-LI' PDB 1GK6 unspecified 'HUMAN VIMENTIN COIL 2B FRAGMENT LINKED TO GCN4 LEUCINE ZIPPER (Z2B)' PDB 1GZL unspecified 'CRYSTAL STRUCTURE OF C14LINKMID/IQN17: A CROSS-LINKED INHIBITOR OF HIV-1 ENTRY BOUND TO THE GP41 HYDROPHOBIC POCKET' PDB 1IHQ unspecified 'GLYTM1BZIP: A CHIMERIC PEPTIDE MODEL OF THE N-TERMINUS OF ARAT SHORT ALPHA TROPOMYOSIN WITH THE N-TERMINUS ENCODED BYEXON 1B' PDB 1IJ0 unspecified 'COILED COIL TRIMER GCN4-PVLS SER AT BURIED D POSITION' PDB 1IJ1 unspecified 'GCN4-PVLT COILED-COIL TRIMER WITH THREONINE AT THE D(12)POSITION' PDB 1IJ2 unspecified 'GCN4-PVTL COILED-COIL TRIMER WITH THREONINE AT THE A(16)POSITION' PDB 1IJ3 unspecified 'GCN4-PVSL COILED-COIL TRIMER WITH SERINE AT THE A(16)POSITION' PDB 1KQL unspecified 'CRYSTAL STRUCTURE OF THE C-TERMINAL REGION OF STRIATEDMUSCLE ALPHA-TROPOMYOSIN AT 2.7 ANGSTROM RESOLUTION' PDB 1LD4 unspecified 'PLACEMENT OF THE STRUCTURAL PROTEINS IN SINDBIS VIRUS' PDB 1LLM unspecified 'CRYSTAL STRUCTURE OF A ZIF23-GCN4 CHIMERA BOUND TO DNA' PDB 1NKN unspecified 'VISUALIZING AN UNSTABLE COILED COIL: THE CRYSTAL STRUCTUREOF AN N-TERMINAL SEGMENT OF THE SCALLOP MYOSIN ROD' PDB 1PIQ unspecified 'CRYSTAL STRUCTURE OF GCN4-PIQ, A TRIMERIC COILED COIL WITH BURIED POLAR RESIDUES' PDB 1RB1 unspecified 'GCN4-LEUCINE ZIPPER CORE MUTANT AS N16A TRIGONAL AUTOMATICSOLUTION' PDB 1RB4 unspecified 'ANTIPARALLEL TRIMER OF GCN4-LEUCINE ZIPPER CORE MUTANT ASN16A TETRAGONAL AUTOMATIC SOLUTION' PDB 1RB5 unspecified 'ANTIPARALLEL TRIMER OF GCN4-LEUCINE ZIPPER CORE MUTANT ASN16A TRIGONAL FORM' PDB 1RB6 unspecified 'ANTIPARALLEL TRIMER OF GCN4-LEUCINE ZIPPER CORE MUTANT ASN16A TETRAGONAL FORM' PDB 1SWI unspecified 'GCN4-LEUCINE ZIPPER CORE MUTANT AS N16A COMPLEXED WITH BENZENE' PDB 1TMZ unspecified 'TMZIP: A CHIMERIC PEPTIDE MODEL OF THE N- TERMINUS OF ALPHA TROPOMYOSIN, NMR, 15 STRUCTURES' PDB 1W5G unspecified 'AN ANTI-PARALLEL FOUR HELIX BUNDLE ( ACETIMIDE MODIFICATION).' PDB 1W5H unspecified 'AN ANTI-PARALLEL FOUR HELIX BUNDLE.' PDB 1W5I unspecified 'ABA DOES NOT AFFECT TOPOLOGY OF PLI.' PDB 1W5J unspecified 'AN ANTI-PARALLEL FOUR HELIX BUNDLE' PDB 1W5K unspecified 'AN ANTI-PARALLEL FOUR HELIX BUNDLE' PDB 1W5L unspecified 'AN ANTI-PARALLEL TO PARALLEL SWITCH.' PDB 1YSA unspecified 'GCN4 (BASIC REGION, LEUCINE ZIPPER) COMPLEX WITH AP-1 DEOXYRIBONUCLEIC ACID' PDB 1ZII unspecified 'GCN4-LEUCINE ZIPPER CORE MUTANT ASN16ABA IN THE DIMERIC STATE' PDB 1ZIJ unspecified 'GCN4-LEUCINE ZIPPER CORE MUTANT ASN16ABA IN THE TRIMERIC STATE' PDB 1ZIK unspecified 'GCN4-LEUCINE ZIPPER CORE MUTANT ASN16LYS IN THE DIMERIC STATE' PDB 1ZIL unspecified 'GCN4-LEUCINE ZIPPER CORE MUTANT ASN16GLN IN THE DIMERIC STATE' PDB 1ZIM unspecified 'GCN4-LEUCINE ZIPPER CORE MUTANT ASN16GLN IN THE TRIMERIC STATE' PDB 1ZTA unspecified 'LEUCINE ZIPPER MONOMER (NMR, 20 STRUCTURES)' PDB 2DGC unspecified 'GCN4 BASIC DOMAIN, LEUCINE ZIPPER COMPLEXED WITH ATF/CREB SITE DEOXYRIBONUCLEIC ACID' PDB 2ZTA unspecified 'GCN4 LEUCINE ZIPPER' # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 1VZL _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.recvd_initial_deposition_date 2004-05-20 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yadav, M.K.' 1 'Leman, L.' 2 'Stout, C.D.' 3 'Ghadiri, M.R.' 4 # _citation.id primary _citation.title 'Crystal Structure of an Anti-Parallel Four Helix Bundle Mutant Pl1-E20C' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Yadav, M.K.' 1 primary 'Leman, L.' 2 primary 'Stout, C.D.' 3 primary 'Gadhiri, M.R.' 4 # _cell.entry_id 1VZL _cell.length_a 35.384 _cell.length_b 35.384 _cell.length_c 104.318 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VZL _symmetry.space_group_name_H-M 'P 42 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'GENERAL CONTROL PROTEIN GCN4' 4046.866 2 ? YES ? 'DIMER ASYMMETRIC UNIT OF FOUR HELIX BUNDLE MUTATION GLU20CYS' 2 water nat water 18.015 83 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'GCN4 LEUCINE ZIPPER, AMINO ACID BIOSYNTHESIS REGULATORY PROTEIN, PLI E20C' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ACE)RMKQIEDKLEEILSKLYHICNELARIKKLLGER' _entity_poly.pdbx_seq_one_letter_code_can XRMKQIEDKLEEILSKLYHICNELARIKKLLGER _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 ARG n 1 3 MET n 1 4 LYS n 1 5 GLN n 1 6 ILE n 1 7 GLU n 1 8 ASP n 1 9 LYS n 1 10 LEU n 1 11 GLU n 1 12 GLU n 1 13 ILE n 1 14 LEU n 1 15 SER n 1 16 LYS n 1 17 LEU n 1 18 TYR n 1 19 HIS n 1 20 ILE n 1 21 CYS n 1 22 ASN n 1 23 GLU n 1 24 LEU n 1 25 ALA n 1 26 ARG n 1 27 ILE n 1 28 LYS n 1 29 LYS n 1 30 LEU n 1 31 LEU n 1 32 GLY n 1 33 GLU n 1 34 ARG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'SACCHAROMYCES CEREVISIAE' _pdbx_entity_src_syn.organism_common_name ;BAKER'S YEAST ; _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details ;BASED ON SEQUENCE FROM SACCHAROMYCES CEREVISIAE (BAKER'S YEAST) ; # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 1VZL 1 ? ? 1VZL ? 2 UNP GCN4_YEAST 1 ? ? P03069 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1VZL A 1 ? 1 ? 1VZL 1 ? 1 ? 1 1 2 2 1VZL A 2 ? 34 ? P03069 249 ? 281 ? 2 34 3 1 1VZL B 1 ? 1 ? 1VZL 1 ? 1 ? 1 1 4 2 1VZL B 2 ? 34 ? P03069 249 ? 281 ? 2 34 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1VZL ILE A 6 ? UNP P03069 LEU 253 CONFLICT 6 1 1 1VZL LEU A 10 ? UNP P03069 VAL 257 CONFLICT 10 2 1 1VZL ILE A 13 ? UNP P03069 LEU 260 CONFLICT 13 3 1 1VZL LEU A 17 ? UNP P03069 ASN 264 CONFLICT 17 4 1 1VZL ILE A 20 ? UNP P03069 LEU 267 CONFLICT 20 5 1 1VZL CYS A 21 ? UNP P03069 GLU 268 'ENGINEERED MUTATION' 21 6 1 1VZL LEU A 24 ? UNP P03069 VAL 271 CONFLICT 24 7 1 1VZL ILE A 27 ? UNP P03069 LEU 274 CONFLICT 27 8 1 1VZL LEU A 31 ? UNP P03069 VAL 278 CONFLICT 31 9 3 1VZL ILE B 6 ? UNP P03069 LEU 253 CONFLICT 6 10 3 1VZL LEU B 10 ? UNP P03069 VAL 257 CONFLICT 10 11 3 1VZL ILE B 13 ? UNP P03069 LEU 260 CONFLICT 13 12 3 1VZL LEU B 17 ? UNP P03069 ASN 264 CONFLICT 17 13 3 1VZL ILE B 20 ? UNP P03069 LEU 267 CONFLICT 20 14 3 1VZL CYS B 21 ? UNP P03069 GLU 268 'ENGINEERED MUTATION' 21 15 3 1VZL LEU B 24 ? UNP P03069 VAL 271 CONFLICT 24 16 3 1VZL ILE B 27 ? UNP P03069 LEU 274 CONFLICT 27 17 3 1VZL LEU B 31 ? UNP P03069 VAL 278 CONFLICT 31 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1VZL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2 _exptl_crystal.density_percent_sol 39 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 10.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '100MM CAPS, 30% PEG 400, PH 10.5' # _diffrn.id 1 _diffrn.ambient_temp 114 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector ? _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2004-05-18 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1VZL _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 34.77 _reflns.d_resolution_high 1.60 _reflns.number_obs 9395 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.03 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 27.10 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.29 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.66 _reflns_shell.percent_possible_all 97.6 _reflns_shell.Rmerge_I_obs 0.20 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.20 _reflns_shell.pdbx_redundancy 3.16 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1VZL _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 8913 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 51.99 _refine.ls_d_res_high 1.60 _refine.ls_percent_reflns_obs 99.63 _refine.ls_R_factor_obs 0.21417 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21191 _refine.ls_R_factor_R_free 0.26276 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 447 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.955 _refine.correlation_coeff_Fo_to_Fc_free 0.927 _refine.B_iso_mean 18.151 _refine.aniso_B[1][1] 0.63 _refine.aniso_B[2][2] 0.63 _refine.aniso_B[3][3] -1.27 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.105 _refine.pdbx_overall_ESU_R_Free 0.111 _refine.overall_SU_ML 0.056 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.575 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 520 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 83 _refine_hist.number_atoms_total 603 _refine_hist.d_res_high 1.60 _refine_hist.d_res_low 51.99 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.054 0.021 ? 522 'X-RAY DIFFRACTION' ? r_bond_other_d 0.003 0.020 ? 516 'X-RAY DIFFRACTION' ? r_angle_refined_deg 4.592 2.032 ? 691 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.555 3.000 ? 1202 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.953 5.000 ? 63 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.210 0.200 ? 82 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.047 0.020 ? 546 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.056 0.020 ? 84 'X-RAY DIFFRACTION' ? r_nbd_refined 0.269 0.200 ? 197 'X-RAY DIFFRACTION' ? r_nbd_other 0.277 0.200 ? 613 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other 0.182 0.200 ? 497 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.250 0.200 ? 52 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.291 0.200 ? 20 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.331 0.200 ? 45 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.327 0.200 ? 11 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.145 1.500 ? 324 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 3.214 2.000 ? 514 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 6.786 3.000 ? 198 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 9.655 4.500 ? 177 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.600 _refine_ls_shell.d_res_low 1.642 _refine_ls_shell.number_reflns_R_work 605 _refine_ls_shell.R_factor_R_work 0.361 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.444 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 35 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 1VZL _struct.title 'An Anti-Parallel Four Helix Bundle Mutant pLI-E20C' _struct.pdbx_descriptor 'GENERAL CONTROL PROTEIN GCN4' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1VZL _struct_keywords.pdbx_keywords 'FOUR HELIX BUNDLE' _struct_keywords.text 'FOUR HELIX BUNDLE, COILED COIL, ANTIPARALLEL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 MET A 3 ? GLU A 33 ? MET A 3 GLU A 33 1 ? 31 HELX_P HELX_P2 2 ARG B 2 ? GLU B 33 ? ARG B 2 GLU B 33 1 ? 32 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 1VZL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1VZL _atom_sites.fract_transf_matrix[1][1] 0.028261 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.028261 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009586 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 1 ? ? ? A . n A 1 2 ARG 2 2 2 ARG ARG A . n A 1 3 MET 3 3 3 MET MET A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 GLN 5 5 5 GLN GLN A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 ASP 8 8 8 ASP ASP A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 TYR 18 18 18 TYR TYR A . n A 1 19 HIS 19 19 19 HIS HIS A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 CYS 21 21 21 CYS CYS A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 ILE 27 27 27 ILE ILE A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 ARG 34 34 34 ARG ARG A . n B 1 1 ACE 1 1 ? ? ? B . n B 1 2 ARG 2 2 2 ARG ARG B . n B 1 3 MET 3 3 3 MET MET B . n B 1 4 LYS 4 4 4 LYS LYS B . n B 1 5 GLN 5 5 5 GLN GLN B . n B 1 6 ILE 6 6 6 ILE ILE B . n B 1 7 GLU 7 7 7 GLU GLU B . n B 1 8 ASP 8 8 8 ASP ASP B . n B 1 9 LYS 9 9 9 LYS LYS B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 GLU 11 11 11 GLU GLU B . n B 1 12 GLU 12 12 12 GLU GLU B . n B 1 13 ILE 13 13 13 ILE ILE B . n B 1 14 LEU 14 14 14 LEU LEU B . n B 1 15 SER 15 15 15 SER SER B . n B 1 16 LYS 16 16 16 LYS LYS B . n B 1 17 LEU 17 17 17 LEU LEU B . n B 1 18 TYR 18 18 18 TYR TYR B . n B 1 19 HIS 19 19 19 HIS HIS B . n B 1 20 ILE 20 20 20 ILE ILE B . n B 1 21 CYS 21 21 21 CYS CYS B . n B 1 22 ASN 22 22 22 ASN ASN B . n B 1 23 GLU 23 23 23 GLU GLU B . n B 1 24 LEU 24 24 24 LEU LEU B . n B 1 25 ALA 25 25 25 ALA ALA B . n B 1 26 ARG 26 26 26 ARG ARG B . n B 1 27 ILE 27 27 27 ILE ILE B . n B 1 28 LYS 28 28 28 LYS LYS B . n B 1 29 LYS 29 29 29 LYS LYS B . n B 1 30 LEU 30 30 30 LEU LEU B . n B 1 31 LEU 31 31 31 LEU LEU B . n B 1 32 GLY 32 32 32 GLY GLY B . n B 1 33 GLU 33 33 33 GLU GLU B . n B 1 34 ARG 34 34 34 ARG ARG B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 1 1 HOH HOH Y . C 2 HOH 2 2 2 HOH HOH Y . C 2 HOH 3 3 3 HOH HOH Y . C 2 HOH 4 4 4 HOH HOH Y . C 2 HOH 5 5 5 HOH HOH Y . C 2 HOH 6 6 6 HOH HOH Y . C 2 HOH 7 7 7 HOH HOH Y . C 2 HOH 8 8 8 HOH HOH Y . C 2 HOH 9 9 9 HOH HOH Y . C 2 HOH 10 10 10 HOH HOH Y . C 2 HOH 11 11 11 HOH HOH Y . C 2 HOH 12 12 12 HOH HOH Y . C 2 HOH 13 13 13 HOH HOH Y . C 2 HOH 14 14 14 HOH HOH Y . C 2 HOH 15 15 15 HOH HOH Y . C 2 HOH 16 16 16 HOH HOH Y . C 2 HOH 17 17 17 HOH HOH Y . C 2 HOH 18 18 18 HOH HOH Y . C 2 HOH 19 19 19 HOH HOH Y . C 2 HOH 20 20 20 HOH HOH Y . C 2 HOH 21 21 21 HOH HOH Y . C 2 HOH 22 22 22 HOH HOH Y . C 2 HOH 23 23 23 HOH HOH Y . C 2 HOH 24 24 24 HOH HOH Y . C 2 HOH 25 25 25 HOH HOH Y . C 2 HOH 26 26 26 HOH HOH Y . C 2 HOH 27 27 27 HOH HOH Y . C 2 HOH 28 28 28 HOH HOH Y . C 2 HOH 29 29 29 HOH HOH Y . C 2 HOH 30 30 30 HOH HOH Y . C 2 HOH 31 31 31 HOH HOH Y . C 2 HOH 32 32 32 HOH HOH Y . C 2 HOH 33 33 33 HOH HOH Y . C 2 HOH 34 34 34 HOH HOH Y . C 2 HOH 35 35 35 HOH HOH Y . C 2 HOH 36 36 36 HOH HOH Y . C 2 HOH 37 37 37 HOH HOH Y . C 2 HOH 38 38 38 HOH HOH Y . C 2 HOH 39 39 39 HOH HOH Y . C 2 HOH 40 40 40 HOH HOH Y . C 2 HOH 41 41 41 HOH HOH Y . C 2 HOH 42 42 42 HOH HOH Y . C 2 HOH 43 43 43 HOH HOH Y . C 2 HOH 44 44 44 HOH HOH Y . C 2 HOH 45 45 45 HOH HOH Y . C 2 HOH 46 46 46 HOH HOH Y . C 2 HOH 47 47 47 HOH HOH Y . C 2 HOH 48 48 48 HOH HOH Y . C 2 HOH 49 49 49 HOH HOH Y . D 2 HOH 1 1 1 HOH HOH Z . D 2 HOH 2 2 2 HOH HOH Z . D 2 HOH 3 3 3 HOH HOH Z . D 2 HOH 4 4 4 HOH HOH Z . D 2 HOH 5 5 5 HOH HOH Z . D 2 HOH 6 6 6 HOH HOH Z . D 2 HOH 7 7 7 HOH HOH Z . D 2 HOH 8 8 8 HOH HOH Z . D 2 HOH 9 9 9 HOH HOH Z . D 2 HOH 10 10 10 HOH HOH Z . D 2 HOH 11 11 11 HOH HOH Z . D 2 HOH 12 12 12 HOH HOH Z . D 2 HOH 13 13 13 HOH HOH Z . D 2 HOH 14 14 14 HOH HOH Z . D 2 HOH 15 15 15 HOH HOH Z . D 2 HOH 16 16 16 HOH HOH Z . D 2 HOH 17 17 17 HOH HOH Z . D 2 HOH 18 18 18 HOH HOH Z . D 2 HOH 19 19 19 HOH HOH Z . D 2 HOH 20 20 20 HOH HOH Z . D 2 HOH 21 21 21 HOH HOH Z . D 2 HOH 22 22 22 HOH HOH Z . D 2 HOH 23 23 23 HOH HOH Z . D 2 HOH 24 24 24 HOH HOH Z . D 2 HOH 25 25 25 HOH HOH Z . D 2 HOH 26 26 26 HOH HOH Z . D 2 HOH 27 27 27 HOH HOH Z . D 2 HOH 28 28 28 HOH HOH Z . D 2 HOH 29 29 29 HOH HOH Z . D 2 HOH 30 30 30 HOH HOH Z . D 2 HOH 31 31 31 HOH HOH Z . D 2 HOH 32 32 32 HOH HOH Z . D 2 HOH 33 33 33 HOH HOH Z . D 2 HOH 34 34 34 HOH HOH Z . # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id Z _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 23 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-10-13 2 'Structure model' 1 1 2006-04-06 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 'REFMAC 5.1.24' ? 1 CrystalClear 'data reduction' . ? 2 CrystalClear 'data scaling' . ? 3 MOLREP phasing . ? 4 # _pdbx_entry_details.entry_id 1VZL _pdbx_entry_details.compound_details ;ENGINEERED RESIDUE GLU 368 CYS, CHAINS A AND B. SINGLE E20C MUTATION APPEARS TO ALTER TOPOLOGY OF PLI FROM PARALLEL TO ANTI-PARALLEL ENGINEERED MUTATION GLU 20 CYS IN CHAINS A AND B ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE SEQUENCE GIVEN BELOW IS THAT OF THE GLU 20 CYS ENGINEERED MUTATION. THE N-TERMINUS IS CAPPED WITH AND ACETYL GROUP (RESIDUE 1). THE FOUR HELIX BUNDLE SEQUENCE STARTS AT RESIDUE 2. ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O Z HOH 3 ? ? O Z HOH 4 ? ? 1.92 2 1 O Y HOH 11 ? ? O Z HOH 10 ? ? 1.93 3 1 CD B ARG 2 ? ? O Y HOH 3 ? ? 2.11 4 1 N B ARG 2 ? ? O Y HOH 2 ? ? 2.14 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 Y _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 17 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 Z _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 21 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 8_665 _pdbx_validate_symm_contact.dist 2.00 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CA A MET 3 ? ? CB A MET 3 ? ? 1.363 1.535 -0.172 0.022 N 2 1 CG A MET 3 ? ? SD A MET 3 ? ? 2.040 1.807 0.233 0.026 N 3 1 CD A GLU 11 ? ? OE2 A GLU 11 ? ? 1.321 1.252 0.069 0.011 N 4 1 CB A TYR 18 ? ? CG A TYR 18 ? ? 1.388 1.512 -0.124 0.015 N 5 1 CG A TYR 18 ? ? CD2 A TYR 18 ? ? 1.251 1.387 -0.136 0.013 N 6 1 CE1 A TYR 18 ? ? CZ A TYR 18 ? ? 1.266 1.381 -0.115 0.013 N 7 1 CG A HIS 19 ? ? ND1 A HIS 19 ? ? 1.274 1.369 -0.095 0.015 N 8 1 CD A GLU 23 ? ? OE2 A GLU 23 ? ? 1.185 1.252 -0.067 0.011 N 9 1 CD A GLU 33 ? ? OE1 A GLU 33 ? ? 1.372 1.252 0.120 0.011 N 10 1 CG A ARG 34 ? ? CD A ARG 34 ? ? 1.671 1.515 0.156 0.025 N 11 1 CD B LYS 4 ? ? CE B LYS 4 ? ? 1.703 1.508 0.195 0.025 N 12 1 CD B GLU 7 ? ? OE1 B GLU 7 ? ? 1.165 1.252 -0.087 0.011 N 13 1 CD B GLU 12 ? ? OE1 B GLU 12 ? ? 1.326 1.252 0.074 0.011 N 14 1 CB B SER 15 ? ? OG B SER 15 ? ? 1.498 1.418 0.080 0.013 N 15 1 CG B TYR 18 ? ? CD2 B TYR 18 ? ? 1.482 1.387 0.095 0.013 N 16 1 CG B TYR 18 ? ? CD1 B TYR 18 ? ? 1.196 1.387 -0.191 0.013 N 17 1 CD1 B TYR 18 ? ? CE1 B TYR 18 ? ? 1.485 1.389 0.096 0.015 N 18 1 CA B ARG 26 ? ? CB B ARG 26 ? ? 1.396 1.535 -0.139 0.022 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A MET 3 ? ? CA A MET 3 ? ? C A MET 3 ? ? 97.72 110.40 -12.68 2.00 N 2 1 CG A MET 3 ? ? SD A MET 3 ? ? CE A MET 3 ? ? 113.59 100.20 13.39 1.60 N 3 1 N A GLN 5 ? ? CA A GLN 5 ? ? CB A GLN 5 ? ? 124.18 110.60 13.58 1.80 N 4 1 OE1 A GLU 7 ? ? CD A GLU 7 ? ? OE2 A GLU 7 ? ? 131.84 123.30 8.54 1.20 N 5 1 CB A ASP 8 ? ? CG A ASP 8 ? ? OD1 A ASP 8 ? ? 124.21 118.30 5.91 0.90 N 6 1 CB A ASP 8 ? ? CG A ASP 8 ? ? OD2 A ASP 8 ? ? 110.31 118.30 -7.99 0.90 N 7 1 O A ILE 13 ? ? C A ILE 13 ? ? N A LEU 14 ? ? 112.53 122.70 -10.17 1.60 Y 8 1 CD A LYS 16 ? ? CE A LYS 16 ? ? NZ A LYS 16 ? ? 130.02 111.70 18.32 2.30 N 9 1 CB A TYR 18 ? ? CG A TYR 18 ? ? CD1 A TYR 18 ? ? 115.62 121.00 -5.38 0.60 N 10 1 CB A HIS 19 ? ? CG A HIS 19 ? ? CD2 A HIS 19 ? ? 142.15 131.40 10.75 1.20 N 11 1 ND1 A HIS 19 ? ? CG A HIS 19 ? ? CD2 A HIS 19 ? ? 88.59 106.00 -17.41 1.40 N 12 1 ND1 A HIS 19 ? ? CE1 A HIS 19 ? ? NE2 A HIS 19 ? ? 100.81 108.50 -7.69 1.10 N 13 1 NE A ARG 26 ? ? CZ A ARG 26 ? ? NH1 A ARG 26 ? ? 125.20 120.30 4.90 0.50 N 14 1 NE A ARG 26 ? ? CZ A ARG 26 ? ? NH2 A ARG 26 ? ? 115.84 120.30 -4.46 0.50 N 15 1 NE B ARG 2 ? ? CZ B ARG 2 ? ? NH2 B ARG 2 ? ? 115.51 120.30 -4.79 0.50 N 16 1 CB B ASP 8 ? ? CG B ASP 8 ? ? OD2 B ASP 8 ? ? 107.92 118.30 -10.38 0.90 N 17 1 OE1 B GLU 11 ? ? CD B GLU 11 ? ? OE2 B GLU 11 ? ? 132.97 123.30 9.67 1.20 N 18 1 CB B TYR 18 ? ? CG B TYR 18 ? ? CD2 B TYR 18 ? ? 116.06 121.00 -4.94 0.60 N 19 1 CB B TYR 18 ? ? CG B TYR 18 ? ? CD1 B TYR 18 ? ? 124.81 121.00 3.81 0.60 N 20 1 OE1 B GLU 23 ? ? CD B GLU 23 ? ? OE2 B GLU 23 ? ? 115.88 123.30 -7.42 1.20 N 21 1 CG B GLU 23 ? ? CD B GLU 23 ? ? OE1 B GLU 23 ? ? 130.31 118.30 12.01 2.00 N 22 1 CA B LEU 30 ? ? CB B LEU 30 ? ? CG B LEU 30 ? ? 139.84 115.30 24.54 2.30 N 23 1 CB B LEU 30 ? ? CG B LEU 30 ? ? CD2 B LEU 30 ? ? 129.07 111.00 18.07 1.70 N 24 1 CA B LEU 31 ? ? CB B LEU 31 ? ? CG B LEU 31 ? ? 100.12 115.30 -15.18 2.30 N 25 1 CB B LEU 31 ? ? CG B LEU 31 ? ? CD1 B LEU 31 ? ? 96.77 111.00 -14.23 1.70 N # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id HIS _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 19 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.272 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 2 ? N ? A ARG 2 N 2 1 Y 1 A ARG 2 ? CA ? A ARG 2 CA 3 1 Y 1 A ARG 2 ? CB ? A ARG 2 CB 4 1 Y 1 A ARG 2 ? CG ? A ARG 2 CG 5 1 Y 1 A ARG 2 ? CD ? A ARG 2 CD 6 1 Y 1 A ARG 2 ? NE ? A ARG 2 NE 7 1 Y 1 A ARG 2 ? CZ ? A ARG 2 CZ 8 1 Y 1 A ARG 2 ? NH1 ? A ARG 2 NH1 9 1 Y 1 A ARG 2 ? NH2 ? A ARG 2 NH2 10 1 Y 1 A LYS 4 ? CD ? A LYS 4 CD 11 1 Y 1 A LYS 4 ? CE ? A LYS 4 CE 12 1 Y 1 A LYS 4 ? NZ ? A LYS 4 NZ 13 1 Y 1 A GLN 5 ? CD ? A GLN 5 CD 14 1 Y 1 A GLN 5 ? OE1 ? A GLN 5 OE1 15 1 Y 1 A GLN 5 ? NE2 ? A GLN 5 NE2 16 1 Y 1 A LYS 29 ? CE ? A LYS 29 CE 17 1 Y 1 A LYS 29 ? NZ ? A LYS 29 NZ 18 1 Y 1 A ARG 34 ? CZ ? A ARG 34 CZ 19 1 Y 1 A ARG 34 ? NH1 ? A ARG 34 NH1 20 1 Y 1 A ARG 34 ? NH2 ? A ARG 34 NH2 21 1 Y 1 B LYS 4 ? NZ ? B LYS 4 NZ 22 1 Y 1 B GLN 5 ? CG ? B GLN 5 CG 23 1 Y 1 B GLN 5 ? CD ? B GLN 5 CD 24 1 Y 1 B GLN 5 ? OE1 ? B GLN 5 OE1 25 1 Y 1 B GLN 5 ? NE2 ? B GLN 5 NE2 26 1 Y 1 B ARG 26 ? CD ? B ARG 26 CD 27 1 Y 1 B ARG 26 ? NE ? B ARG 26 NE 28 1 Y 1 B ARG 26 ? CZ ? B ARG 26 CZ 29 1 Y 1 B ARG 26 ? NH1 ? B ARG 26 NH1 30 1 Y 1 B ARG 26 ? NH2 ? B ARG 26 NH2 31 1 Y 1 B LYS 29 ? CD ? B LYS 29 CD 32 1 Y 1 B LYS 29 ? CE ? B LYS 29 CE 33 1 Y 1 B LYS 29 ? NZ ? B LYS 29 NZ 34 1 Y 1 B ARG 34 ? CB ? B ARG 34 CB 35 1 Y 1 B ARG 34 ? CG ? B ARG 34 CG 36 1 Y 1 B ARG 34 ? CD ? B ARG 34 CD 37 1 Y 1 B ARG 34 ? NE ? B ARG 34 NE 38 1 Y 1 B ARG 34 ? CZ ? B ARG 34 CZ 39 1 Y 1 B ARG 34 ? NH1 ? B ARG 34 NH1 40 1 Y 1 B ARG 34 ? NH2 ? B ARG 34 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ACE 1 ? A ACE 1 2 1 Y 1 B ACE 1 ? B ACE 1 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #