data_1W1G # _entry.id 1W1G # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1W1G PDBE EBI-20199 WWPDB D_1290020199 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1H1W unspecified 'HIGH RESOLUTION CRYSTAL STRUCTURE OF THE HUMAN PDK1 CATALYTIC DOMAIN' PDB 1OKY unspecified 'STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH STAUROSPORINE' PDB 1OKZ unspecified 'STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH UCN-01' PDB 1UU3 unspecified 'STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH LY333531' PDB 1UU7 unspecified 'STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH BIM-2' PDB 1UU8 unspecified 'STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH BIM-1' PDB 1UU9 unspecified 'STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH BIM-3' PDB 1UVR unspecified 'STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH BIM-8' PDB 1W1D unspecified 'CRYSTAL STRUCTURE OF THE PDK1 PLECKSTRIN HOMOLOGY (PH) DOMAIN BOUND TO INOSITOL (1, 3,4,5)-TETRAKISPHOSPHATE' PDB 1W1H unspecified 'CRYSTAL STRUCTURE OF THE PDK1 PLECKSTRIN HOMOLOGY (PH) DOMAIN' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1W1G _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2004-06-21 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Komander, D.' 1 'Deak, M.' 2 'Alessi, D.R.' 3 'Van Aalten, D.M.F.' 4 # _citation.id primary _citation.title 'Structural Insights Into the Regulation of Pdk1 by Phosphoinositides and Inositol Phosphates' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 23 _citation.page_first 3918 _citation.page_last ? _citation.year 2004 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15457207 _citation.pdbx_database_id_DOI 10.1038/SJ.EMBOJ.7600379 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Komander, D.' 1 primary 'Fairservice, A.' 2 primary 'Deak, M.' 3 primary 'Kular, G.S.' 4 primary 'Prescott, A.R.' 5 primary 'Downes, C.P.' 6 primary 'Safrany, S.T.' 7 primary 'Alessi, D.R.' 8 primary 'Van Aalten, D.M.F.' 9 # _cell.entry_id 1W1G _cell.length_a 35.264 _cell.length_b 58.943 _cell.length_c 36.440 _cell.angle_alpha 90.00 _cell.angle_beta 102.33 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1W1G _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '3-PHOSPHOINOSITIDE DEPENDENT PROTEIN KINASE-1' 17816.186 1 2.7.1.37 ? 'PLECKSTRIN HOMOLOGY DOMAIN, RESIDUES 409-556' ? 2 non-polymer syn ;(2R)-3-{[(S)-{[(2S,3R,5S,6S)-2,6-DIHYDROXY-3,4,5-TRIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-(1-HYDROXYBUTOXY)PROPYL BUTYRATE ; 716.350 1 ? ? ? ? 3 water nat water 18.015 163 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name HPDK1 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPLGSNIEQYIHDLDSNSFELDLQFSEDEKRLLLEKQAGGNPWHQFVENNLILKMGPVDKRKGLFARRRQLLLTEGPHLY YVDPVNKVLKGEIPWSQELRPEAKNFKTFFVHTPNRTYYLMDPSGNAHKWCRKIQEVWRQRYQSHPDAAVQ ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSNIEQYIHDLDSNSFELDLQFSEDEKRLLLEKQAGGNPWHQFVENNLILKMGPVDKRKGLFARRRQLLLTEGPHLY YVDPVNKVLKGEIPWSQELRPEAKNFKTFFVHTPNRTYYLMDPSGNAHKWCRKIQEVWRQRYQSHPDAAVQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 ASN n 1 7 ILE n 1 8 GLU n 1 9 GLN n 1 10 TYR n 1 11 ILE n 1 12 HIS n 1 13 ASP n 1 14 LEU n 1 15 ASP n 1 16 SER n 1 17 ASN n 1 18 SER n 1 19 PHE n 1 20 GLU n 1 21 LEU n 1 22 ASP n 1 23 LEU n 1 24 GLN n 1 25 PHE n 1 26 SER n 1 27 GLU n 1 28 ASP n 1 29 GLU n 1 30 LYS n 1 31 ARG n 1 32 LEU n 1 33 LEU n 1 34 LEU n 1 35 GLU n 1 36 LYS n 1 37 GLN n 1 38 ALA n 1 39 GLY n 1 40 GLY n 1 41 ASN n 1 42 PRO n 1 43 TRP n 1 44 HIS n 1 45 GLN n 1 46 PHE n 1 47 VAL n 1 48 GLU n 1 49 ASN n 1 50 ASN n 1 51 LEU n 1 52 ILE n 1 53 LEU n 1 54 LYS n 1 55 MET n 1 56 GLY n 1 57 PRO n 1 58 VAL n 1 59 ASP n 1 60 LYS n 1 61 ARG n 1 62 LYS n 1 63 GLY n 1 64 LEU n 1 65 PHE n 1 66 ALA n 1 67 ARG n 1 68 ARG n 1 69 ARG n 1 70 GLN n 1 71 LEU n 1 72 LEU n 1 73 LEU n 1 74 THR n 1 75 GLU n 1 76 GLY n 1 77 PRO n 1 78 HIS n 1 79 LEU n 1 80 TYR n 1 81 TYR n 1 82 VAL n 1 83 ASP n 1 84 PRO n 1 85 VAL n 1 86 ASN n 1 87 LYS n 1 88 VAL n 1 89 LEU n 1 90 LYS n 1 91 GLY n 1 92 GLU n 1 93 ILE n 1 94 PRO n 1 95 TRP n 1 96 SER n 1 97 GLN n 1 98 GLU n 1 99 LEU n 1 100 ARG n 1 101 PRO n 1 102 GLU n 1 103 ALA n 1 104 LYS n 1 105 ASN n 1 106 PHE n 1 107 LYS n 1 108 THR n 1 109 PHE n 1 110 PHE n 1 111 VAL n 1 112 HIS n 1 113 THR n 1 114 PRO n 1 115 ASN n 1 116 ARG n 1 117 THR n 1 118 TYR n 1 119 TYR n 1 120 LEU n 1 121 MET n 1 122 ASP n 1 123 PRO n 1 124 SER n 1 125 GLY n 1 126 ASN n 1 127 ALA n 1 128 HIS n 1 129 LYS n 1 130 TRP n 1 131 CYS n 1 132 ARG n 1 133 LYS n 1 134 ILE n 1 135 GLN n 1 136 GLU n 1 137 VAL n 1 138 TRP n 1 139 ARG n 1 140 GLN n 1 141 ARG n 1 142 TYR n 1 143 GLN n 1 144 SER n 1 145 HIS n 1 146 PRO n 1 147 ASP n 1 148 ALA n 1 149 ALA n 1 150 VAL n 1 151 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PGEX _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 1W1G 1 ? ? 1W1G ? 2 UNP PDPK_HUMAN 1 ? ? O15530 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1W1G A 1 ? 3 ? 1W1G 406 ? 408 ? 406 408 2 2 1W1G A 4 ? 151 ? O15530 409 ? 556 ? 409 556 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 4PT non-polymer . ;(2R)-3-{[(S)-{[(2S,3R,5S,6S)-2,6-DIHYDROXY-3,4,5-TRIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-(1-HYDROXYBUTOXY)PROPYL BUTYRATE ; 'DIC4-PHOSPHATIDYLINOSITOL(3,4,5)TRISPHOSPHATE' 'C17 H36 O22 P4' 716.350 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1W1G _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.1 _exptl_crystal.density_percent_sol 0.41 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.20 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '25 % PEG 4000, 0.1 M SODIUM ACETATE [PH 4.2], 0.3 M AMMONIUM ACETATE' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS 4' _diffrn_detector.pdbx_collection_date 2003-09-15 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1W1G _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.000 _reflns.d_resolution_high 1.450 _reflns.number_obs 25810 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.05000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 8.8000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.900 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.45 _reflns_shell.d_res_low 1.50 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.37000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.500 _reflns_shell.pdbx_redundancy 2.70 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1W1G _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 25241 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.00 _refine.ls_d_res_high 1.45 _refine.ls_percent_reflns_obs 99.7 _refine.ls_R_factor_obs 0.183 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.182 _refine.ls_R_factor_R_free 0.236 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 2.100 _refine.ls_number_reflns_R_free 545 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.972 _refine.correlation_coeff_Fo_to_Fc_free 0.956 _refine.B_iso_mean 26.94 _refine.aniso_B[1][1] 1.58000 _refine.aniso_B[2][2] -0.83000 _refine.aniso_B[3][3] -0.73000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.06000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. THE SIDE CHAINS OF SOME DISORDERED RESIDUES WERE REFINED EITHER WITH THE OCCUPANCY SET TO 0.02, OR THE RESIDUE WAS MUTATED TO ALA. THE ACYL-CHAINS OF THE LIGAND WERE NOT MODELLED DUE TO DISORDER. ; _refine.pdbx_starting_model 'PDK1PH INSP4 MODEL' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.089 _refine.pdbx_overall_ESU_R_Free 0.081 _refine.overall_SU_ML 0.073 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 4.471 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1194 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 33 _refine_hist.number_atoms_solvent 163 _refine_hist.number_atoms_total 1390 _refine_hist.d_res_high 1.45 _refine_hist.d_res_low 25.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.022 ? 1273 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 1115 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.703 1.961 ? 1731 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.860 3.001 ? 2588 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.622 5.000 ? 142 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.693 23.731 ? 67 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.710 15.000 ? 219 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.708 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.109 0.200 ? 184 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.020 ? 1363 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 263 'X-RAY DIFFRACTION' ? r_nbd_refined 0.221 0.200 ? 267 'X-RAY DIFFRACTION' ? r_nbd_other 0.200 0.200 ? 1116 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.181 0.200 ? 613 'X-RAY DIFFRACTION' ? r_nbtor_other 0.107 0.200 ? 672 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.159 0.200 ? 117 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.166 0.200 ? 8 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.240 0.200 ? 39 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.274 0.200 ? 17 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.727 1.500 ? 746 'X-RAY DIFFRACTION' ? r_mcbond_other 0.745 1.500 ? 287 'X-RAY DIFFRACTION' ? r_mcangle_it 2.305 2.000 ? 1168 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 3.614 3.000 ? 612 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 4.923 4.500 ? 563 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.45 _refine_ls_shell.d_res_low 1.49 _refine_ls_shell.number_reflns_R_work 1834 _refine_ls_shell.R_factor_R_work 0.3390 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.3080 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 44 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 1W1G _struct.title 'Crystal Structure of the PDK1 Pleckstrin Homology (PH) domain bound to DiC4-phosphatidylinositol (3,4,5)-trisphosphate' _struct.pdbx_descriptor '3-PHOSPHOINOSITIDE DEPENDENT PROTEIN KINASE-1 (E.C.2.7.1.37)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1W1G _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;TRANSFERASE, PDK1, PHOSPHOINOSITIDE DEPENDENT PROTEIN KINASE 1, PKB, PLECKSTRIN HOMOLOGY DOMAIN, INOSITOL PHOSPHATE, PHOSPHOINOSITIDE, SIGNAL TRANSDUCTION, PI3-KINASE, PIP3 SERINE/THREONINE PROTEIN KINASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 6 ? GLN A 9 ? ASN A 411 GLN A 414 5 ? 4 HELX_P HELX_P2 2 SER A 26 ? ASN A 41 ? SER A 431 ASN A 446 1 ? 16 HELX_P HELX_P3 3 TRP A 43 ? VAL A 47 ? TRP A 448 VAL A 452 5 ? 5 HELX_P HELX_P4 4 ASN A 126 ? GLN A 143 ? ASN A 531 GLN A 548 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 76 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 481 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 77 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 482 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.22 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 6 ? AB ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AB 4 5 ? anti-parallel AB 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ILE A 11 ? ASP A 15 ? ILE A 416 ASP A 420 AA 2 SER A 18 ? LEU A 21 ? SER A 423 LEU A 426 AA 3 ILE A 52 ? LYS A 62 ? ILE A 457 LYS A 467 AA 4 PHE A 65 ? THR A 74 ? PHE A 470 THR A 479 AA 5 HIS A 78 ? ASP A 83 ? HIS A 483 ASP A 488 AA 6 VAL A 88 ? ILE A 93 ? VAL A 493 ILE A 498 AB 1 ILE A 11 ? ASP A 15 ? ILE A 416 ASP A 420 AB 2 SER A 18 ? LEU A 21 ? SER A 423 LEU A 426 AB 3 ILE A 52 ? LYS A 62 ? ILE A 457 LYS A 467 AB 4 ARG A 116 ? MET A 121 ? ARG A 521 MET A 526 AB 5 THR A 108 ? THR A 113 ? THR A 513 THR A 518 AB 6 ARG A 100 ? ALA A 103 ? ARG A 505 ALA A 508 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LEU A 14 ? N LEU A 419 O SER A 18 ? O SER A 423 AA 2 3 N LEU A 21 ? N LEU A 426 O LEU A 53 ? O LEU A 458 AA 3 4 N LYS A 62 ? N LYS A 467 O PHE A 65 ? O PHE A 470 AA 4 5 N THR A 74 ? N THR A 479 O HIS A 78 ? O HIS A 483 AA 5 6 N ASP A 83 ? N ASP A 488 O VAL A 88 ? O VAL A 493 AB 1 2 N LEU A 14 ? N LEU A 419 O SER A 18 ? O SER A 423 AB 2 3 N LEU A 21 ? N LEU A 426 O LEU A 53 ? O LEU A 458 AB 3 4 N ARG A 61 ? N ARG A 466 O TYR A 119 ? O TYR A 524 AB 4 5 N LEU A 120 ? N LEU A 525 O PHE A 109 ? O PHE A 514 AB 5 6 N HIS A 112 ? N HIS A 517 O ARG A 100 ? O ARG A 505 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 14 _struct_site.details 'BINDING SITE FOR RESIDUE 4PT A1550' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 HIS A 12 ? HIS A 417 . ? 1_555 ? 2 AC1 14 LEU A 14 ? LEU A 419 . ? 1_555 ? 3 AC1 14 LYS A 60 ? LYS A 465 . ? 1_555 ? 4 AC1 14 LYS A 62 ? LYS A 467 . ? 1_555 ? 5 AC1 14 ARG A 67 ? ARG A 472 . ? 1_555 ? 6 AC1 14 ARG A 69 ? ARG A 474 . ? 1_555 ? 7 AC1 14 TYR A 81 ? TYR A 486 . ? 1_555 ? 8 AC1 14 LYS A 90 ? LYS A 495 . ? 1_555 ? 9 AC1 14 ARG A 116 ? ARG A 521 . ? 1_555 ? 10 AC1 14 HOH C . ? HOH A 2029 . ? 1_555 ? 11 AC1 14 HOH C . ? HOH A 2084 . ? 1_555 ? 12 AC1 14 HOH C . ? HOH A 2155 . ? 1_555 ? 13 AC1 14 HOH C . ? HOH A 2156 . ? 1_555 ? 14 AC1 14 HOH C . ? HOH A 2157 . ? 1_555 ? # _database_PDB_matrix.entry_id 1W1G _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1W1G _atom_sites.fract_transf_matrix[1][1] 0.028357 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006201 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016966 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.028091 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 406 ? ? ? A . n A 1 2 PRO 2 407 407 PRO PRO A . n A 1 3 LEU 3 408 408 LEU LEU A . n A 1 4 GLY 4 409 409 GLY GLY A . n A 1 5 SER 5 410 410 SER SER A . n A 1 6 ASN 6 411 411 ASN ASN A . n A 1 7 ILE 7 412 412 ILE ILE A . n A 1 8 GLU 8 413 413 GLU GLU A . n A 1 9 GLN 9 414 414 GLN GLN A . n A 1 10 TYR 10 415 415 TYR TYR A . n A 1 11 ILE 11 416 416 ILE ILE A . n A 1 12 HIS 12 417 417 HIS HIS A . n A 1 13 ASP 13 418 418 ASP ASP A . n A 1 14 LEU 14 419 419 LEU LEU A . n A 1 15 ASP 15 420 420 ASP ASP A . n A 1 16 SER 16 421 421 SER SER A . n A 1 17 ASN 17 422 422 ASN ASN A . n A 1 18 SER 18 423 423 SER SER A . n A 1 19 PHE 19 424 424 PHE PHE A . n A 1 20 GLU 20 425 425 GLU GLU A . n A 1 21 LEU 21 426 426 LEU LEU A . n A 1 22 ASP 22 427 427 ASP ASP A . n A 1 23 LEU 23 428 428 LEU LEU A . n A 1 24 GLN 24 429 429 GLN GLN A . n A 1 25 PHE 25 430 430 PHE PHE A . n A 1 26 SER 26 431 431 SER SER A . n A 1 27 GLU 27 432 432 GLU GLU A . n A 1 28 ASP 28 433 433 ASP ASP A . n A 1 29 GLU 29 434 434 GLU GLU A . n A 1 30 LYS 30 435 435 LYS LYS A . n A 1 31 ARG 31 436 436 ARG ARG A . n A 1 32 LEU 32 437 437 LEU LEU A . n A 1 33 LEU 33 438 438 LEU LEU A . n A 1 34 LEU 34 439 439 LEU LEU A . n A 1 35 GLU 35 440 440 GLU GLU A . n A 1 36 LYS 36 441 441 LYS LYS A . n A 1 37 GLN 37 442 442 GLN GLN A . n A 1 38 ALA 38 443 443 ALA ALA A . n A 1 39 GLY 39 444 444 GLY GLY A . n A 1 40 GLY 40 445 445 GLY GLY A . n A 1 41 ASN 41 446 446 ASN ASN A . n A 1 42 PRO 42 447 447 PRO PRO A . n A 1 43 TRP 43 448 448 TRP TRP A . n A 1 44 HIS 44 449 449 HIS HIS A . n A 1 45 GLN 45 450 450 GLN GLN A . n A 1 46 PHE 46 451 451 PHE PHE A . n A 1 47 VAL 47 452 452 VAL VAL A . n A 1 48 GLU 48 453 453 GLU GLU A . n A 1 49 ASN 49 454 454 ASN ASN A . n A 1 50 ASN 50 455 455 ASN ASN A . n A 1 51 LEU 51 456 456 LEU LEU A . n A 1 52 ILE 52 457 457 ILE ILE A . n A 1 53 LEU 53 458 458 LEU LEU A . n A 1 54 LYS 54 459 459 LYS LYS A . n A 1 55 MET 55 460 460 MET MET A . n A 1 56 GLY 56 461 461 GLY GLY A . n A 1 57 PRO 57 462 462 PRO PRO A . n A 1 58 VAL 58 463 463 VAL VAL A . n A 1 59 ASP 59 464 464 ASP ASP A . n A 1 60 LYS 60 465 465 LYS LYS A . n A 1 61 ARG 61 466 466 ARG ARG A . n A 1 62 LYS 62 467 467 LYS LYS A . n A 1 63 GLY 63 468 468 GLY GLY A . n A 1 64 LEU 64 469 469 LEU LEU A . n A 1 65 PHE 65 470 470 PHE PHE A . n A 1 66 ALA 66 471 471 ALA ALA A . n A 1 67 ARG 67 472 472 ARG ARG A . n A 1 68 ARG 68 473 473 ARG ARG A . n A 1 69 ARG 69 474 474 ARG ARG A . n A 1 70 GLN 70 475 475 GLN GLN A . n A 1 71 LEU 71 476 476 LEU LEU A . n A 1 72 LEU 72 477 477 LEU LEU A . n A 1 73 LEU 73 478 478 LEU LEU A . n A 1 74 THR 74 479 479 THR THR A . n A 1 75 GLU 75 480 480 GLU GLU A . n A 1 76 GLY 76 481 481 GLY GLY A . n A 1 77 PRO 77 482 482 PRO PRO A . n A 1 78 HIS 78 483 483 HIS HIS A . n A 1 79 LEU 79 484 484 LEU LEU A . n A 1 80 TYR 80 485 485 TYR TYR A . n A 1 81 TYR 81 486 486 TYR TYR A . n A 1 82 VAL 82 487 487 VAL VAL A . n A 1 83 ASP 83 488 488 ASP ASP A . n A 1 84 PRO 84 489 489 PRO PRO A . n A 1 85 VAL 85 490 490 VAL VAL A . n A 1 86 ASN 86 491 491 ASN ASN A . n A 1 87 LYS 87 492 492 LYS LYS A . n A 1 88 VAL 88 493 493 VAL VAL A . n A 1 89 LEU 89 494 494 LEU LEU A . n A 1 90 LYS 90 495 495 LYS LYS A . n A 1 91 GLY 91 496 496 GLY GLY A . n A 1 92 GLU 92 497 497 GLU GLU A . n A 1 93 ILE 93 498 498 ILE ILE A . n A 1 94 PRO 94 499 499 PRO PRO A . n A 1 95 TRP 95 500 500 TRP TRP A . n A 1 96 SER 96 501 501 SER SER A . n A 1 97 GLN 97 502 502 GLN GLN A . n A 1 98 GLU 98 503 503 GLU GLU A . n A 1 99 LEU 99 504 504 LEU LEU A . n A 1 100 ARG 100 505 505 ARG ARG A . n A 1 101 PRO 101 506 506 PRO PRO A . n A 1 102 GLU 102 507 507 GLU GLU A . n A 1 103 ALA 103 508 508 ALA ALA A . n A 1 104 LYS 104 509 509 LYS LYS A . n A 1 105 ASN 105 510 510 ASN ASN A . n A 1 106 PHE 106 511 511 PHE PHE A . n A 1 107 LYS 107 512 512 LYS LYS A . n A 1 108 THR 108 513 513 THR THR A . n A 1 109 PHE 109 514 514 PHE PHE A . n A 1 110 PHE 110 515 515 PHE PHE A . n A 1 111 VAL 111 516 516 VAL VAL A . n A 1 112 HIS 112 517 517 HIS HIS A . n A 1 113 THR 113 518 518 THR THR A . n A 1 114 PRO 114 519 519 PRO PRO A . n A 1 115 ASN 115 520 520 ASN ASN A . n A 1 116 ARG 116 521 521 ARG ARG A . n A 1 117 THR 117 522 522 THR THR A . n A 1 118 TYR 118 523 523 TYR TYR A . n A 1 119 TYR 119 524 524 TYR TYR A . n A 1 120 LEU 120 525 525 LEU LEU A . n A 1 121 MET 121 526 526 MET MET A . n A 1 122 ASP 122 527 527 ASP ASP A . n A 1 123 PRO 123 528 528 PRO PRO A . n A 1 124 SER 124 529 529 SER SER A . n A 1 125 GLY 125 530 530 GLY GLY A . n A 1 126 ASN 126 531 531 ASN ASN A . n A 1 127 ALA 127 532 532 ALA ALA A . n A 1 128 HIS 128 533 533 HIS HIS A . n A 1 129 LYS 129 534 534 LYS LYS A . n A 1 130 TRP 130 535 535 TRP TRP A . n A 1 131 CYS 131 536 536 CYS CYS A . n A 1 132 ARG 132 537 537 ARG ARG A . n A 1 133 LYS 133 538 538 LYS LYS A . n A 1 134 ILE 134 539 539 ILE ILE A . n A 1 135 GLN 135 540 540 GLN GLN A . n A 1 136 GLU 136 541 541 GLU GLU A . n A 1 137 VAL 137 542 542 VAL VAL A . n A 1 138 TRP 138 543 543 TRP TRP A . n A 1 139 ARG 139 544 544 ARG ARG A . n A 1 140 GLN 140 545 545 GLN GLN A . n A 1 141 ARG 141 546 546 ARG ARG A . n A 1 142 TYR 142 547 547 TYR TYR A . n A 1 143 GLN 143 548 548 GLN GLN A . n A 1 144 SER 144 549 549 SER SER A . n A 1 145 HIS 145 550 550 HIS HIS A . n A 1 146 PRO 146 551 ? ? ? A . n A 1 147 ASP 147 552 ? ? ? A . n A 1 148 ALA 148 553 ? ? ? A . n A 1 149 ALA 149 554 ? ? ? A . n A 1 150 VAL 150 555 ? ? ? A . n A 1 151 GLN 151 556 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4PT 1 1550 1550 4PT 4PT A . C 3 HOH 1 2001 2001 HOH HOH A . C 3 HOH 2 2002 2002 HOH HOH A . C 3 HOH 3 2003 2003 HOH HOH A . C 3 HOH 4 2004 2004 HOH HOH A . C 3 HOH 5 2005 2005 HOH HOH A . C 3 HOH 6 2006 2006 HOH HOH A . C 3 HOH 7 2007 2007 HOH HOH A . C 3 HOH 8 2008 2008 HOH HOH A . C 3 HOH 9 2009 2009 HOH HOH A . C 3 HOH 10 2010 2010 HOH HOH A . C 3 HOH 11 2011 2011 HOH HOH A . C 3 HOH 12 2012 2012 HOH HOH A . C 3 HOH 13 2013 2013 HOH HOH A . C 3 HOH 14 2014 2014 HOH HOH A . C 3 HOH 15 2015 2015 HOH HOH A . C 3 HOH 16 2016 2016 HOH HOH A . C 3 HOH 17 2017 2017 HOH HOH A . C 3 HOH 18 2018 2018 HOH HOH A . C 3 HOH 19 2019 2019 HOH HOH A . C 3 HOH 20 2020 2020 HOH HOH A . C 3 HOH 21 2021 2021 HOH HOH A . C 3 HOH 22 2022 2022 HOH HOH A . C 3 HOH 23 2023 2023 HOH HOH A . C 3 HOH 24 2024 2024 HOH HOH A . C 3 HOH 25 2025 2025 HOH HOH A . C 3 HOH 26 2026 2026 HOH HOH A . C 3 HOH 27 2027 2027 HOH HOH A . C 3 HOH 28 2028 2028 HOH HOH A . C 3 HOH 29 2029 2029 HOH HOH A . C 3 HOH 30 2030 2030 HOH HOH A . C 3 HOH 31 2031 2031 HOH HOH A . C 3 HOH 32 2032 2032 HOH HOH A . C 3 HOH 33 2033 2033 HOH HOH A . C 3 HOH 34 2034 2034 HOH HOH A . C 3 HOH 35 2035 2035 HOH HOH A . C 3 HOH 36 2036 2036 HOH HOH A . C 3 HOH 37 2037 2037 HOH HOH A . C 3 HOH 38 2038 2038 HOH HOH A . C 3 HOH 39 2039 2039 HOH HOH A . C 3 HOH 40 2040 2040 HOH HOH A . C 3 HOH 41 2041 2041 HOH HOH A . C 3 HOH 42 2042 2042 HOH HOH A . C 3 HOH 43 2043 2043 HOH HOH A . C 3 HOH 44 2044 2044 HOH HOH A . C 3 HOH 45 2045 2045 HOH HOH A . C 3 HOH 46 2046 2046 HOH HOH A . C 3 HOH 47 2047 2047 HOH HOH A . C 3 HOH 48 2048 2048 HOH HOH A . C 3 HOH 49 2049 2049 HOH HOH A . C 3 HOH 50 2050 2050 HOH HOH A . C 3 HOH 51 2051 2051 HOH HOH A . C 3 HOH 52 2052 2052 HOH HOH A . C 3 HOH 53 2053 2053 HOH HOH A . C 3 HOH 54 2054 2054 HOH HOH A . C 3 HOH 55 2055 2055 HOH HOH A . C 3 HOH 56 2056 2056 HOH HOH A . C 3 HOH 57 2057 2057 HOH HOH A . C 3 HOH 58 2058 2058 HOH HOH A . C 3 HOH 59 2059 2059 HOH HOH A . C 3 HOH 60 2060 2060 HOH HOH A . C 3 HOH 61 2061 2061 HOH HOH A . C 3 HOH 62 2062 2062 HOH HOH A . C 3 HOH 63 2063 2063 HOH HOH A . C 3 HOH 64 2064 2064 HOH HOH A . C 3 HOH 65 2065 2065 HOH HOH A . C 3 HOH 66 2066 2066 HOH HOH A . C 3 HOH 67 2067 2067 HOH HOH A . C 3 HOH 68 2068 2068 HOH HOH A . C 3 HOH 69 2069 2069 HOH HOH A . C 3 HOH 70 2070 2070 HOH HOH A . C 3 HOH 71 2071 2071 HOH HOH A . C 3 HOH 72 2072 2072 HOH HOH A . C 3 HOH 73 2073 2073 HOH HOH A . C 3 HOH 74 2074 2074 HOH HOH A . C 3 HOH 75 2075 2075 HOH HOH A . C 3 HOH 76 2076 2076 HOH HOH A . C 3 HOH 77 2077 2077 HOH HOH A . C 3 HOH 78 2078 2078 HOH HOH A . C 3 HOH 79 2079 2079 HOH HOH A . C 3 HOH 80 2080 2080 HOH HOH A . C 3 HOH 81 2081 2081 HOH HOH A . C 3 HOH 82 2082 2082 HOH HOH A . C 3 HOH 83 2083 2083 HOH HOH A . C 3 HOH 84 2084 2084 HOH HOH A . C 3 HOH 85 2085 2085 HOH HOH A . C 3 HOH 86 2086 2086 HOH HOH A . C 3 HOH 87 2087 2087 HOH HOH A . C 3 HOH 88 2088 2088 HOH HOH A . C 3 HOH 89 2089 2089 HOH HOH A . C 3 HOH 90 2090 2090 HOH HOH A . C 3 HOH 91 2091 2091 HOH HOH A . C 3 HOH 92 2092 2092 HOH HOH A . C 3 HOH 93 2093 2093 HOH HOH A . C 3 HOH 94 2094 2094 HOH HOH A . C 3 HOH 95 2095 2095 HOH HOH A . C 3 HOH 96 2096 2096 HOH HOH A . C 3 HOH 97 2097 2097 HOH HOH A . C 3 HOH 98 2098 2098 HOH HOH A . C 3 HOH 99 2099 2099 HOH HOH A . C 3 HOH 100 2100 2100 HOH HOH A . C 3 HOH 101 2101 2101 HOH HOH A . C 3 HOH 102 2102 2102 HOH HOH A . C 3 HOH 103 2103 2103 HOH HOH A . C 3 HOH 104 2104 2104 HOH HOH A . C 3 HOH 105 2105 2105 HOH HOH A . C 3 HOH 106 2106 2106 HOH HOH A . C 3 HOH 107 2107 2107 HOH HOH A . C 3 HOH 108 2108 2108 HOH HOH A . C 3 HOH 109 2109 2109 HOH HOH A . C 3 HOH 110 2110 2110 HOH HOH A . C 3 HOH 111 2111 2111 HOH HOH A . C 3 HOH 112 2112 2112 HOH HOH A . C 3 HOH 113 2113 2113 HOH HOH A . C 3 HOH 114 2114 2114 HOH HOH A . C 3 HOH 115 2115 2115 HOH HOH A . C 3 HOH 116 2116 2116 HOH HOH A . C 3 HOH 117 2117 2117 HOH HOH A . C 3 HOH 118 2118 2118 HOH HOH A . C 3 HOH 119 2119 2119 HOH HOH A . C 3 HOH 120 2120 2120 HOH HOH A . C 3 HOH 121 2121 2121 HOH HOH A . C 3 HOH 122 2122 2122 HOH HOH A . C 3 HOH 123 2123 2123 HOH HOH A . C 3 HOH 124 2124 2124 HOH HOH A . C 3 HOH 125 2125 2125 HOH HOH A . C 3 HOH 126 2126 2126 HOH HOH A . C 3 HOH 127 2127 2127 HOH HOH A . C 3 HOH 128 2128 2128 HOH HOH A . C 3 HOH 129 2129 2129 HOH HOH A . C 3 HOH 130 2130 2130 HOH HOH A . C 3 HOH 131 2131 2131 HOH HOH A . C 3 HOH 132 2132 2132 HOH HOH A . C 3 HOH 133 2133 2133 HOH HOH A . C 3 HOH 134 2134 2134 HOH HOH A . C 3 HOH 135 2135 2135 HOH HOH A . C 3 HOH 136 2136 2136 HOH HOH A . C 3 HOH 137 2137 2137 HOH HOH A . C 3 HOH 138 2138 2138 HOH HOH A . C 3 HOH 139 2139 2139 HOH HOH A . C 3 HOH 140 2140 2140 HOH HOH A . C 3 HOH 141 2141 2141 HOH HOH A . C 3 HOH 142 2142 2142 HOH HOH A . C 3 HOH 143 2143 2143 HOH HOH A . C 3 HOH 144 2144 2144 HOH HOH A . C 3 HOH 145 2145 2145 HOH HOH A . C 3 HOH 146 2146 2146 HOH HOH A . C 3 HOH 147 2147 2147 HOH HOH A . C 3 HOH 148 2148 2148 HOH HOH A . C 3 HOH 149 2149 2149 HOH HOH A . C 3 HOH 150 2150 2150 HOH HOH A . C 3 HOH 151 2151 2151 HOH HOH A . C 3 HOH 152 2152 2152 HOH HOH A . C 3 HOH 153 2153 2153 HOH HOH A . C 3 HOH 154 2154 2154 HOH HOH A . C 3 HOH 155 2155 2155 HOH HOH A . C 3 HOH 156 2156 2156 HOH HOH A . C 3 HOH 157 2157 2157 HOH HOH A . C 3 HOH 158 2158 2158 HOH HOH A . C 3 HOH 159 2159 2159 HOH HOH A . C 3 HOH 160 2160 2160 HOH HOH A . C 3 HOH 161 2161 2161 HOH HOH A . C 3 HOH 162 2162 2162 HOH HOH A . C 3 HOH 163 2163 2163 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-11-19 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 10.5388 27.1746 24.0723 -0.0377 0.0133 -0.0088 -0.0001 -0.0004 -0.0049 0.1679 1.4071 0.4956 0.1263 -0.1429 -0.5604 -0.0012 -0.0141 0.0265 -0.0763 0.0301 -0.0092 0.0443 -0.0069 -0.0288 'X-RAY DIFFRACTION' 2 ? refined 9.5684 26.7739 22.8190 -0.0232 -0.0096 -0.0304 -0.0101 -0.0146 -0.0199 0.4742 1.4621 0.4845 0.2713 -0.2195 -0.8330 0.0278 0.0203 0.0334 -0.0906 0.0671 0.0777 0.0498 0.0051 -0.0950 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 414 ? ? A 466 ? ? ? ? 'X-RAY DIFFRACTION' 2 1 A 472 ? ? A 487 ? ? ? ? 'X-RAY DIFFRACTION' 3 1 A 494 ? ? A 543 ? ? ? ? 'X-RAY DIFFRACTION' 4 2 A 408 ? ? A 413 ? ? ? ? 'X-RAY DIFFRACTION' 5 2 A 466 ? ? A 471 ? ? ? ? 'X-RAY DIFFRACTION' 6 2 A 544 ? ? A 549 ? ? ? ? 'X-RAY DIFFRACTION' 7 2 A 488 ? ? A 493 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0003 ? 1 CrystalClear 'data reduction' . ? 2 d*TREK 'data scaling' . ? 3 CNS phasing . ? 4 # _pdbx_database_remark.id 700 _pdbx_database_remark.text ; SHEET THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, TWO SHEETS ARE DEFINED. ; # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NE2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLN _pdbx_validate_close_contact.auth_seq_id_1 429 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 2041 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.13 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 2025 ? ? 1_555 O A HOH 2108 ? ? 1_556 2.09 2 1 O A HOH 2104 ? ? 1_555 O A HOH 2147 ? ? 1_554 2.17 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 464 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 464 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 464 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 125.83 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 7.53 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 411 ? ? 39.46 64.84 2 1 PHE A 470 ? ? -121.79 -137.16 3 1 ASN A 510 ? ? -160.56 -154.91 4 1 GLN A 548 ? ? -119.56 -163.18 5 1 SER A 549 ? ? 67.85 151.93 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LEU 408 ? CG ? A LEU 3 CG 2 1 Y 1 A LEU 408 ? CD1 ? A LEU 3 CD1 3 1 Y 1 A LEU 408 ? CD2 ? A LEU 3 CD2 4 1 Y 1 A GLU 503 ? CG ? A GLU 98 CG 5 1 Y 1 A GLU 503 ? CD ? A GLU 98 CD 6 1 Y 1 A GLU 503 ? OE1 ? A GLU 98 OE1 7 1 Y 1 A GLU 503 ? OE2 ? A GLU 98 OE2 8 1 Y 1 A LYS 509 ? CG ? A LYS 104 CG 9 1 Y 1 A LYS 509 ? CD ? A LYS 104 CD 10 1 Y 1 A LYS 509 ? CE ? A LYS 104 CE 11 1 Y 1 A LYS 509 ? NZ ? A LYS 104 NZ 12 1 Y 1 A HIS 550 ? CA ? A HIS 145 CA 13 1 Y 1 A HIS 550 ? C ? A HIS 145 C 14 1 Y 1 A HIS 550 ? O ? A HIS 145 O 15 1 Y 1 A HIS 550 ? CB ? A HIS 145 CB 16 1 Y 1 A HIS 550 ? CG ? A HIS 145 CG 17 1 Y 1 A HIS 550 ? ND1 ? A HIS 145 ND1 18 1 Y 1 A HIS 550 ? CD2 ? A HIS 145 CD2 19 1 Y 1 A HIS 550 ? CE1 ? A HIS 145 CE1 20 1 Y 1 A HIS 550 ? NE2 ? A HIS 145 NE2 21 1 N 1 A 4PT 1550 ? C0L ? B 4PT 1 C0L 22 1 N 1 A 4PT 1550 ? O0M ? B 4PT 1 O0M 23 1 N 1 A 4PT 1550 ? C0N ? B 4PT 1 C0N 24 1 N 1 A 4PT 1550 ? C0P ? B 4PT 1 C0P 25 1 N 1 A 4PT 1550 ? C0Q ? B 4PT 1 C0Q 26 1 N 1 A 4PT 1550 ? C0G ? B 4PT 1 C0G 27 1 N 1 A 4PT 1550 ? O0H ? B 4PT 1 O0H 28 1 N 1 A 4PT 1550 ? C0I ? B 4PT 1 C0I 29 1 N 1 A 4PT 1550 ? C0J ? B 4PT 1 C0J 30 1 N 1 A 4PT 1550 ? C0K ? B 4PT 1 C0K # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 406 ? A GLY 1 2 1 Y 1 A PRO 551 ? A PRO 146 3 1 Y 1 A ASP 552 ? A ASP 147 4 1 Y 1 A ALA 553 ? A ALA 148 5 1 Y 1 A ALA 554 ? A ALA 149 6 1 Y 1 A VAL 555 ? A VAL 150 7 1 Y 1 A GLN 556 ? A GLN 151 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;(2R)-3-{[(S)-{[(2S,3R,5S,6S)-2,6-DIHYDROXY-3,4,5-TRIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-(1-HYDROXYBUTOXY)PROPYL BUTYRATE ; 4PT 3 water HOH #