HEADER HYDROLASE 16-JUL-04 1W3L TITLE ENDOGLUCANASE CEL5A FROM BACILLUS AGARADHAERENS IN COMPLEX WITH TITLE 2 CELLOTRI DERIVED-TETRAHYDROOXAZINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOGLUCANASE 5A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CATALYTIC MODULE, RESIDUES 27-329; COMPND 5 SYNONYM: ENDO-1,4-BETA-GLUCANASE, ALKALINE CELLULASE; COMPND 6 EC: 3.2.1.4; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS AGARADHAERENS; SOURCE 3 ORGANISM_TAXID: 76935; SOURCE 4 EXPRESSION_SYSTEM: BACILLUS SUBTILIS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 1423; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: PL2306; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PMOL995; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: THERMAMYL-AMYLASE PROMOT KEYWDS HYDROLASE, GLYCOSIDE HYDROLASE, CELLULOSE DEGRADATION, ENDOGLUCANASE, KEYWDS 2 FAMILY 5, TETRAHYDROOXAZINE EXPDTA X-RAY DIFFRACTION AUTHOR T.M.GLOSTER,J.M.MACDONALD,C.A.TARLING,R.V.STICK,S.W.WITHERS, AUTHOR 2 G.J.DAVIES REVDAT 5 13-DEC-23 1W3L 1 HETSYN REVDAT 4 29-JUL-20 1W3L 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 24-FEB-09 1W3L 1 VERSN REVDAT 2 17-NOV-04 1W3L 1 JRNL REVDAT 1 08-SEP-04 1W3L 0 JRNL AUTH T.M.GLOSTER,J.M.MACDONALD,C.A.TARLING,R.V.STICK,S.W.WITHERS, JRNL AUTH 2 G.J.DAVIES JRNL TITL STRUCTURAL, THERMODYNAMIC, AND KINETIC ANALYSES OF JRNL TITL 2 TETRAHYDROOXAZINE-DERIVED INHIBITORS BOUND TO JRNL TITL 3 {BETA}-GLUCOSIDASES JRNL REF J.BIOL.CHEM. V. 279 49236 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 15356002 JRNL DOI 10.1074/JBC.M407195200 REMARK 2 REMARK 2 RESOLUTION. 1.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 51.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 132684 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.106 REMARK 3 R VALUE (WORKING SET) : 0.105 REMARK 3 FREE R VALUE : 0.121 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6980 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.04 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.07 REMARK 3 REFLECTION IN BIN (WORKING SET) : 9462 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.1970 REMARK 3 BIN FREE R VALUE SET COUNT : 496 REMARK 3 BIN FREE R VALUE : 0.2150 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2377 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 49 REMARK 3 SOLVENT ATOMS : 606 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 8.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.62000 REMARK 3 B22 (A**2) : -0.41000 REMARK 3 B33 (A**2) : -0.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.020 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.020 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.011 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.479 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.985 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.982 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2815 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2405 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3867 ; 1.698 ; 1.944 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5681 ; 1.032 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 328 ; 7.026 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 160 ;35.014 ;25.875 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 466 ;11.636 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;15.978 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 422 ; 0.113 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3105 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 529 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 628 ; 0.265 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2678 ; 0.223 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1416 ; 0.226 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1422 ; 0.161 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 375 ; 0.162 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 2 ; 0.377 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 35 ; 0.231 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 84 ; 0.267 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 78 ; 0.212 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2089 ; 1.528 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 642 ; 0.603 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2680 ; 1.771 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1427 ; 2.420 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1182 ; 3.208 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1W3L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-JUL-04. REMARK 100 THE DEPOSITION ID IS D_1290015506. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-03 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93300 REMARK 200 MONOCHROMATOR : DIAMOND (111), GE(220) REMARK 200 OPTICS : SAGITALLY FOCUSING GE(220) AND A REMARK 200 MULTILAYER REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 132684 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.040 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 8.000 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.37100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 1OCQ REMARK 200 REMARK 200 REMARK: STRUCTURE ISOMORPHOUS WITH STARTING MODEL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN CONCENTRATION 20MG/ML, 1.3 M REMARK 280 AMMONIUM SULPHATE PH 5.0, 25% GLYCEROL AS CRYOPROTECTANT, PH 5.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.45450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.41000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.71700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 38.41000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.45450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.71700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 1 REMARK 465 ASN A 2 REMARK 465 ASP A 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N GLY A 148 O2 GOL A 1305 2.08 REMARK 500 CA GLY A 148 O2 GOL A 1305 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASP A 117 CA ASP A 117 CB 0.185 REMARK 500 VAL A 240 CA VAL A 240 CB 0.126 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 62 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ASP A 99 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 MET A 275 CG - SD - CE ANGL. DEV. = 9.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 103 -78.10 -158.60 REMARK 500 ALA A 137 93.32 -166.00 REMARK 500 ASN A 138 -71.01 -38.92 REMARK 500 ASP A 166 89.66 -152.12 REMARK 500 ASN A 168 8.22 -158.64 REMARK 500 ASP A 237 -141.90 -130.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 167 ASN A 168 -147.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 62 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2028 DISTANCE = 6.91 ANGSTROMS REMARK 525 HOH A2031 DISTANCE = 6.51 ANGSTROMS REMARK 525 HOH A2142 DISTANCE = 6.15 ANGSTROMS REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "AB" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 8-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 9-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1A3H RELATED DB: PDB REMARK 900 ENDOGLUCANASE CEL5A FROM BACILLUS AGARADHERANS AT 1.6A RESOLUTION REMARK 900 RELATED ID: 1H11 RELATED DB: PDB REMARK 900 2-DEOXY-2-FLURO-B-D-CELLOTRIOSYL/ENZYME INTERMEDIATE COMPLEX OF THE REMARK 900 ENDOGLUCANASE CEL5A FROM BACILLUS AGARADHEARANS AT 1.08 ANGSTROM REMARK 900 RESOLUTION REMARK 900 RELATED ID: 1H2J RELATED DB: PDB REMARK 900 ENDOGLUCANASE CEL5A FROM BACILLUS AGARADHAERENS IN THE ORTHORHOMBIC REMARK 900 CRYSTAL FORM IN COMPLEX WITH UNHYDROLYSED AND COVALENTLY LINKED 2,4- REMARK 900 DINITROPHENYL-2-DEOXY-2FLUORO- CELLOBIOSIDE AT 1.15 A RESOLUTION REMARK 900 RELATED ID: 1H5V RELATED DB: PDB REMARK 900 THIOPENTASACCHARIDE COMPLEX OF THE ENDOGLUCANASE CEL5A FROM REMARK 900 BACILLUS AGARADHARENS AT 1.1 A RESOLUTION IN THE TETRAGONAL CRYSTAL REMARK 900 FORM REMARK 900 RELATED ID: 1HF6 RELATED DB: PDB REMARK 900 ENDOGLUCANASE CEL5A FROM BACILLUS AGARADHAERENS IN THE ORTHORHOMBIC REMARK 900 CRYSTAL FORM IN COMPLEX WITH CELLOTRIOSE REMARK 900 RELATED ID: 1OCQ RELATED DB: PDB REMARK 900 COMPLEX OF THE ENDOGLUCANASE CEL5A FROM BACILLUS AGARADHEARANS AT REMARK 900 1.08 ANGSTROM RESOLUTION WITH CELLOBIO-DERIVED ISOFAGOMINE REMARK 900 RELATED ID: 2A3H RELATED DB: PDB REMARK 900 CELLOBIOSE COMPLEX OF THE ENDOGLUCANASE CEL5A FROM BACILLUS REMARK 900 AGARADHERANS AT 2.0 A RESOLUTION REMARK 900 RELATED ID: 3A3H RELATED DB: PDB REMARK 900 CELLOTRIOSE COMPLEX OF THE ENDOGLUCANASE CEL5A FROM BACILLUS REMARK 900 AGARADHERANS AT 1.6 A RESOLUTION REMARK 900 RELATED ID: 5A3H RELATED DB: PDB REMARK 900 2-DEOXY-2-FLURO-B-D-CELLOBIOSYL/ENZYME INTERMEDIATE COMPLEX OF THE REMARK 900 ENDOGLUCANASE CEL5A FROM BACILLUS AGARADHEARANS AT 1.8 ANGSTROMS REMARK 900 RESOLUTION REMARK 900 RELATED ID: 6A3H RELATED DB: PDB REMARK 900 2-DEOXY-2-FLURO-B-D-CELLOTRIOSYL/ENZYME INTERMEDIATE COMPLEX OF THE REMARK 900 ENDOGLUCANASE CEL5A FROM BACILLUS AGARADHEARANS AT 1.6 ANGSTROM REMARK 900 RESOLUTION REMARK 900 RELATED ID: 7A3H RELATED DB: PDB REMARK 900 NATIVE ENDOGLUCANASE CEL5A CATALYTIC CORE DOMAIN AT 0.95 ANGSTROMS REMARK 900 RESOLUTION REMARK 900 RELATED ID: 1W3J RELATED DB: PDB REMARK 900 FAMILY 1 B-GLUCOSIDASE FROM THERMOTOGA MARITIMA IN COMPLEX WITH REMARK 900 TETRAHYDROOXAZINE DOMAIN AT 0.95 ANGSTROMS RESOLUTION REMARK 900 RELATED ID: 1W3K RELATED DB: PDB REMARK 900 ENDOGLUCANASE CEL5A FROM BACILLUS AGARADHAERENS IN COMPLEX WITH REMARK 900 CELLOBIO DERIVED- TETRAHYDROOXAZINE REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE FIRST 26 RESIDUES IN THE DATABASE CORRESPOND TO THE REMARK 999 PROSEQUENCE. OUR NUMBERING BEGINS AT THE FIRST RESIDUE REMARK 999 OBTAINED AFTER CLEAVAGE OF THE PROSEQUENCE DBREF 1W3L A 1 303 UNP O85465 GUN5_BACAG 27 329 SEQRES 1 A 303 ASP ASN ASP SER VAL VAL GLU GLU HIS GLY GLN LEU SER SEQRES 2 A 303 ILE SER ASN GLY GLU LEU VAL ASN GLU ARG GLY GLU GLN SEQRES 3 A 303 VAL GLN LEU LYS GLY MET SER SER HIS GLY LEU GLN TRP SEQRES 4 A 303 TYR GLY GLN PHE VAL ASN TYR GLU SER MET LYS TRP LEU SEQRES 5 A 303 ARG ASP ASP TRP GLY ILE ASN VAL PHE ARG ALA ALA MET SEQRES 6 A 303 TYR THR SER SER GLY GLY TYR ILE ASP ASP PRO SER VAL SEQRES 7 A 303 LYS GLU LYS VAL LYS GLU ALA VAL GLU ALA ALA ILE ASP SEQRES 8 A 303 LEU ASP ILE TYR VAL ILE ILE ASP TRP HIS ILE LEU SER SEQRES 9 A 303 ASP ASN ASP PRO ASN ILE TYR LYS GLU GLU ALA LYS ASP SEQRES 10 A 303 PHE PHE ASP GLU MET SER GLU LEU TYR GLY ASP TYR PRO SEQRES 11 A 303 ASN VAL ILE TYR GLU ILE ALA ASN GLU PRO ASN GLY SER SEQRES 12 A 303 ASP VAL THR TRP GLY ASN GLN ILE LYS PRO TYR ALA GLU SEQRES 13 A 303 GLU VAL ILE PRO ILE ILE ARG ASN ASN ASP PRO ASN ASN SEQRES 14 A 303 ILE ILE ILE VAL GLY THR GLY THR TRP SER GLN ASP VAL SEQRES 15 A 303 HIS HIS ALA ALA ASP ASN GLN LEU ALA ASP PRO ASN VAL SEQRES 16 A 303 MET TYR ALA PHE HIS PHE TYR ALA GLY THR HIS GLY GLN SEQRES 17 A 303 ASN LEU ARG ASP GLN VAL ASP TYR ALA LEU ASP GLN GLY SEQRES 18 A 303 ALA ALA ILE PHE VAL SER GLU TRP GLY THR SER ALA ALA SEQRES 19 A 303 THR GLY ASP GLY GLY VAL PHE LEU ASP GLU ALA GLN VAL SEQRES 20 A 303 TRP ILE ASP PHE MET ASP GLU ARG ASN LEU SER TRP ALA SEQRES 21 A 303 ASN TRP SER LEU THR HIS LYS ASP GLU SER SER ALA ALA SEQRES 22 A 303 LEU MET PRO GLY ALA ASN PRO THR GLY GLY TRP THR GLU SEQRES 23 A 303 ALA GLU LEU SER PRO SER GLY THR PHE VAL ARG GLU LYS SEQRES 24 A 303 ILE ARG GLU SER HET BGC B 1 11 HET BGC B 2 11 HET GOL A1304 8 HET GOL A1305 18 HET SO4 A1306 5 HET OXZ A1309 10 HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM OXZ TETRAHYDROOXAZINE HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 BGC 2(C6 H12 O6) FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 SO4 O4 S 2- FORMUL 6 OXZ C5 H11 N O4 FORMUL 7 HOH *606(H2 O) HELIX 1 1 SER A 4 GLY A 10 1 7 HELIX 2 2 GLY A 36 GLY A 41 1 6 HELIX 3 3 GLN A 42 VAL A 44 5 3 HELIX 4 4 ASN A 45 ASP A 55 1 11 HELIX 5 5 SER A 77 ASP A 93 1 17 HELIX 6 6 TYR A 111 GLY A 127 1 17 HELIX 7 7 GLN A 150 ASN A 164 1 15 HELIX 8 8 THR A 175 GLN A 180 1 6 HELIX 9 9 ASP A 181 ASP A 187 1 7 HELIX 10 10 GLY A 207 GLN A 220 1 14 HELIX 11 11 PHE A 241 ARG A 255 1 15 HELIX 12 12 THR A 285 GLU A 288 5 4 HELIX 13 13 SER A 290 SER A 303 1 14 SHEET 1 AA 2 SER A 13 SER A 15 0 SHEET 2 AA 2 GLU A 18 VAL A 20 -1 O GLU A 18 N SER A 15 SHEET 1 AB 9 LYS A 30 SER A 34 0 SHEET 2 AB 9 TRP A 259 LEU A 264 1 O TRP A 259 N GLY A 31 SHEET 3 AB 9 ILE A 224 GLY A 230 1 O VAL A 226 N ALA A 260 SHEET 4 AB 9 VAL A 195 TYR A 202 1 O TYR A 197 N PHE A 225 SHEET 5 AB 9 ILE A 171 VAL A 173 1 O ILE A 171 N MET A 196 SHEET 6 AB 9 VAL A 132 GLU A 135 1 O TYR A 134 N ILE A 172 SHEET 7 AB 9 TYR A 95 HIS A 101 1 O VAL A 96 N ILE A 133 SHEET 8 AB 9 VAL A 60 TYR A 66 1 O PHE A 61 N ILE A 97 SHEET 9 AB 9 LYS A 30 SER A 34 1 O MET A 32 N ARG A 62 LINK N GLY A 148 O2 CGOL A1305 1555 1555 1.74 LINK OH BTYR A 202 O5 OXZ A1309 1555 1555 1.80 LINK OE2BGLU A 228 N1 OXZ A1309 1555 1555 1.74 LINK O4 OXZ A1309 C1 BGC B 1 1555 1555 1.38 LINK O4 BGC B 1 C1 BGC B 2 1555 1555 1.43 CISPEP 1 TRP A 262 SER A 263 0 -0.06 CRYST1 54.909 69.434 76.820 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018212 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014402 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013017 0.00000