HEADER LYASE 22-OCT-04 1WA3 TITLE MECHANISM OF THE CLASS I KDPG ALDOLASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-KETO-3-DEOXY-6-PHOSPHOGLUCONATE ALDOLASE; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 SYNONYM: 4-HYDROXY-2-OXOGLUTARATE ALDOLASE, 2-DEHYDRO-3- COMPND 5 DEOXYPHOSPHOGLUCONATE ALDOLASE, 4-HYDROXY-2-OXOGLUTARATE ALDOLASE; COMPND 6 EC: 4.1.2.14; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: SCHIFF BASE FORMED WITH PYRUVATE IN THE ACTIVE SITE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 2336; SOURCE 4 ATCC: 43589; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28B; SOURCE 9 OTHER_DETAILS: DSM 3109 KEYWDS KDPG, PYRUVATE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR S.W.B.FULLERTON,J.S.GRIFFITHS,A.B.MERKEL,N.J.WYMER,M.J.HUTCHINS, AUTHOR 2 C.A.FIERKE,E.J.TOONE,J.H.NAISMITH REVDAT 9 23-OCT-24 1WA3 1 REMARK REVDAT 8 13-DEC-23 1WA3 1 REMARK REVDAT 7 15-NOV-23 1WA3 1 REMARK LINK ATOM REVDAT 6 23-OCT-13 1WA3 1 HEADER KEYWDS REMARK REVDAT 5 13-JUL-11 1WA3 1 VERSN REVDAT 4 24-FEB-09 1WA3 1 VERSN REVDAT 3 22-MAR-06 1WA3 1 JRNL REVDAT 2 18-JAN-06 1WA3 1 JRNL REVDAT 1 26-JAN-05 1WA3 0 JRNL AUTH S.W.B.FULLERTON,J.S.GRIFFITHS,A.B.MERKEL,M.CHERIYAN, JRNL AUTH 2 N.J.WYMER,M.J.HUTCHINS,C.A.FIERKE,E.J.TOONE,J.H.NAISMITH JRNL TITL MECHANISM OF THE CLASS I KDPG ALDOLASE. JRNL REF BIOORG.MED.CHEM. V. 14 3002 2006 JRNL REFN ISSN 0968-0896 JRNL PMID 16403639 JRNL DOI 10.1016/J.BMC.2005.12.022 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0007 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.44 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 3 NUMBER OF REFLECTIONS : 73594 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3900 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 25 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.94 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4320 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.10 REMARK 3 BIN R VALUE (WORKING SET) : 0.2140 REMARK 3 BIN FREE R VALUE SET COUNT : 201 REMARK 3 BIN FREE R VALUE : 0.3010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9203 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 306 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02000 REMARK 3 B22 (A**2) : 0.04000 REMARK 3 B33 (A**2) : -0.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.198 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.170 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.116 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.840 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 9437 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 12705 ; 1.606 ; 1.983 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1205 ; 5.244 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 336 ;37.805 ;25.179 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1738 ;18.334 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;18.371 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1463 ; 0.143 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6818 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 4506 ; 0.214 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 6487 ; 0.309 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 450 ; 0.131 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 134 ; 0.256 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 22 ; 0.395 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 6172 ; 1.112 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 9687 ; 1.599 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3608 ; 2.775 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3018 ; 4.493 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 203 REMARK 3 ORIGIN FOR THE GROUP (A): 16.5560 33.7470 36.6010 REMARK 3 T TENSOR REMARK 3 T11: 0.0036 T22: 0.0234 REMARK 3 T33: 0.0176 T12: 0.0077 REMARK 3 T13: 0.0065 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 0.0632 L22: 0.1482 REMARK 3 L33: 0.6474 L12: 0.0529 REMARK 3 L13: 0.0496 L23: 0.2882 REMARK 3 S TENSOR REMARK 3 S11: -0.0031 S12: -0.0344 S13: -0.0010 REMARK 3 S21: -0.0791 S22: -0.0041 S23: 0.0192 REMARK 3 S31: -0.1652 S32: 0.0131 S33: 0.0072 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 203 REMARK 3 ORIGIN FOR THE GROUP (A): 16.5560 33.7470 36.6010 REMARK 3 T TENSOR REMARK 3 T11: 0.0036 T22: 0.0234 REMARK 3 T33: 0.0176 T12: 0.0077 REMARK 3 T13: 0.0065 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 0.0677 L22: 0.5472 REMARK 3 L33: 0.6993 L12: 0.0991 REMARK 3 L13: 0.0509 L23: 0.5790 REMARK 3 S TENSOR REMARK 3 S11: 0.0118 S12: -0.0125 S13: -0.0333 REMARK 3 S21: 0.0345 S22: 0.0571 S23: -0.0237 REMARK 3 S31: 0.0139 S32: 0.1052 S33: -0.0689 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 3 C 203 REMARK 3 ORIGIN FOR THE GROUP (A): 16.5560 33.7470 36.6010 REMARK 3 T TENSOR REMARK 3 T11: 0.0036 T22: 0.0234 REMARK 3 T33: 0.0176 T12: 0.0077 REMARK 3 T13: 0.0063 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 0.1059 L22: 2.5720 REMARK 3 L33: 0.0820 L12: 0.2136 REMARK 3 L13: -0.0012 L23: 0.4166 REMARK 3 S TENSOR REMARK 3 S11: 0.2247 S12: -0.0699 S13: -0.0254 REMARK 3 S21: 0.8109 S22: -0.0905 S23: -0.2205 REMARK 3 S31: 0.5003 S32: -0.0246 S33: -0.1342 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 2 D 204 REMARK 3 ORIGIN FOR THE GROUP (A): 16.5560 33.7470 36.6010 REMARK 3 T TENSOR REMARK 3 T11: 0.0036 T22: 0.0235 REMARK 3 T33: 0.0176 T12: 0.0074 REMARK 3 T13: 0.0065 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 0.2261 L22: 0.8971 REMARK 3 L33: 1.6082 L12: 0.4486 REMARK 3 L13: 0.5303 L23: 1.0017 REMARK 3 S TENSOR REMARK 3 S11: 0.0857 S12: 0.0066 S13: -0.0692 REMARK 3 S21: 0.2523 S22: 0.2294 S23: -0.3473 REMARK 3 S31: 0.4178 S32: 0.0943 S33: -0.3151 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 2 E 203 REMARK 3 ORIGIN FOR THE GROUP (A): 16.5560 33.7470 36.6010 REMARK 3 T TENSOR REMARK 3 T11: 0.0036 T22: 0.0234 REMARK 3 T33: 0.0176 T12: 0.0076 REMARK 3 T13: 0.0065 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 0.1105 L22: 0.2055 REMARK 3 L33: 0.6692 L12: 0.0354 REMARK 3 L13: 0.1982 L23: 0.3103 REMARK 3 S TENSOR REMARK 3 S11: 0.1058 S12: -0.0530 S13: -0.0274 REMARK 3 S21: 0.0002 S22: -0.0560 S23: -0.0034 REMARK 3 S31: -0.0317 S32: -0.0255 S33: -0.0499 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 3 F 203 REMARK 3 ORIGIN FOR THE GROUP (A): 16.5560 33.7470 36.6010 REMARK 3 T TENSOR REMARK 3 T11: 0.0036 T22: 0.0234 REMARK 3 T33: 0.0176 T12: 0.0077 REMARK 3 T13: 0.0065 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 0.4098 L22: 0.6612 REMARK 3 L33: 0.2825 L12: 0.1015 REMARK 3 L13: 0.1694 L23: 0.4096 REMARK 3 S TENSOR REMARK 3 S11: 0.0402 S12: 0.0173 S13: -0.1752 REMARK 3 S21: 0.0131 S22: -0.0055 S23: -0.0701 REMARK 3 S31: -0.0302 S32: 0.0226 S33: -0.0347 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WA3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-OCT-04. REMARK 100 THE DEPOSITION ID IS D_1290021345. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAR-02 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 4.60 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.932 REMARK 200 MONOCHROMATOR : DIAMOND (111), GE(220) REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 309752 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 32.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.30000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1EUA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.075M SODIUM ACETATE, 0.1M AMMONIUM REMARK 280 SULPHATE, 28%W/V PEG4000, PH 4.60 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 50.55000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -72.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -74.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 204 REMARK 465 GLU A 205 REMARK 465 MET B 1 REMARK 465 THR B 204 REMARK 465 GLU B 205 REMARK 465 MET C 1 REMARK 465 LYS C 2 REMARK 465 THR C 204 REMARK 465 GLU C 205 REMARK 465 MET D 1 REMARK 465 GLU D 205 REMARK 465 MET E 1 REMARK 465 THR E 204 REMARK 465 GLU E 205 REMARK 465 MET F 1 REMARK 465 LYS F 2 REMARK 465 THR F 204 REMARK 465 GLU F 205 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR D 204 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP B 187 O HOH B 2066 1.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH1 ARG A 77 OE2 GLU A 198 1455 1.82 REMARK 500 NH1 ARG B 77 OD2 ASP B 162 1455 2.08 REMARK 500 OD1 ASN A 19 OD1 ASP C 187 2655 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL A 13 CB - CA - C ANGL. DEV. = -11.7 DEGREES REMARK 500 VAL A 172 CG1 - CB - CG2 ANGL. DEV. = 12.5 DEGREES REMARK 500 VAL B 31 CG1 - CB - CG2 ANGL. DEV. = 10.7 DEGREES REMARK 500 VAL B 172 CG1 - CB - CG2 ANGL. DEV. = 13.7 DEGREES REMARK 500 LEU B 173 CA - CB - CG ANGL. DEV. = 14.5 DEGREES REMARK 500 VAL C 111 CG1 - CB - CG2 ANGL. DEV. = 13.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS B 11 -9.31 65.03 REMARK 500 LYS C 11 -7.15 70.65 REMARK 500 LYS D 11 -14.33 68.33 REMARK 500 LYS F 11 -4.99 72.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D2003 DISTANCE = 6.98 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 1205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 1206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 E 1205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 F 1205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR A 1204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR B 1204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR C 1204 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR D 1205 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR E 1204 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR F 1204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1VLW RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF 2-DEHYDRO-3- DEOXYPHOSPHOGLUCONATEALDOLASE/4- REMARK 900 HYDROXY-2- OXOGLUTARATE ALDOLASE (TM0066) FROMTHERMOTOGA MARITIMA REMARK 900 AT 2.30 A RESOLUTION DBREF 1WA3 A 1 205 UNP Q9WXS1 Q9WXS1 1 205 DBREF 1WA3 B 1 205 UNP Q9WXS1 Q9WXS1 1 205 DBREF 1WA3 C 1 205 UNP Q9WXS1 Q9WXS1 1 205 DBREF 1WA3 D 1 205 UNP Q9WXS1 Q9WXS1 1 205 DBREF 1WA3 E 1 205 UNP Q9WXS1 Q9WXS1 1 205 DBREF 1WA3 F 1 205 UNP Q9WXS1 Q9WXS1 1 205 SEQRES 1 A 205 MET LYS MET GLU GLU LEU PHE LYS LYS HIS LYS ILE VAL SEQRES 2 A 205 ALA VAL LEU ARG ALA ASN SER VAL GLU GLU ALA LYS GLU SEQRES 3 A 205 LYS ALA LEU ALA VAL PHE GLU GLY GLY VAL HIS LEU ILE SEQRES 4 A 205 GLU ILE THR PHE THR VAL PRO ASP ALA ASP THR VAL ILE SEQRES 5 A 205 LYS GLU LEU SER PHE LEU LYS GLU LYS GLY ALA ILE ILE SEQRES 6 A 205 GLY ALA GLY THR VAL THR SER VAL GLU GLN CYS ARG LYS SEQRES 7 A 205 ALA VAL GLU SER GLY ALA GLU PHE ILE VAL SER PRO HIS SEQRES 8 A 205 LEU ASP GLU GLU ILE SER GLN PHE CYS LYS GLU LYS GLY SEQRES 9 A 205 VAL PHE TYR MET PRO GLY VAL MET THR PRO THR GLU LEU SEQRES 10 A 205 VAL LYS ALA MET LYS LEU GLY HIS THR ILE LEU LYS LEU SEQRES 11 A 205 PHE PRO GLY GLU VAL VAL GLY PRO GLN PHE VAL LYS ALA SEQRES 12 A 205 MET LYS GLY PRO PHE PRO ASN VAL LYS PHE VAL PRO THR SEQRES 13 A 205 GLY GLY VAL ASN LEU ASP ASN VAL CYS GLU TRP PHE LYS SEQRES 14 A 205 ALA GLY VAL LEU ALA VAL GLY VAL GLY SER ALA LEU VAL SEQRES 15 A 205 LYS GLY THR PRO ASP GLU VAL ARG GLU LYS ALA LYS ALA SEQRES 16 A 205 PHE VAL GLU LYS ILE ARG GLY CYS THR GLU SEQRES 1 B 205 MET LYS MET GLU GLU LEU PHE LYS LYS HIS LYS ILE VAL SEQRES 2 B 205 ALA VAL LEU ARG ALA ASN SER VAL GLU GLU ALA LYS GLU SEQRES 3 B 205 LYS ALA LEU ALA VAL PHE GLU GLY GLY VAL HIS LEU ILE SEQRES 4 B 205 GLU ILE THR PHE THR VAL PRO ASP ALA ASP THR VAL ILE SEQRES 5 B 205 LYS GLU LEU SER PHE LEU LYS GLU LYS GLY ALA ILE ILE SEQRES 6 B 205 GLY ALA GLY THR VAL THR SER VAL GLU GLN CYS ARG LYS SEQRES 7 B 205 ALA VAL GLU SER GLY ALA GLU PHE ILE VAL SER PRO HIS SEQRES 8 B 205 LEU ASP GLU GLU ILE SER GLN PHE CYS LYS GLU LYS GLY SEQRES 9 B 205 VAL PHE TYR MET PRO GLY VAL MET THR PRO THR GLU LEU SEQRES 10 B 205 VAL LYS ALA MET LYS LEU GLY HIS THR ILE LEU LYS LEU SEQRES 11 B 205 PHE PRO GLY GLU VAL VAL GLY PRO GLN PHE VAL LYS ALA SEQRES 12 B 205 MET LYS GLY PRO PHE PRO ASN VAL LYS PHE VAL PRO THR SEQRES 13 B 205 GLY GLY VAL ASN LEU ASP ASN VAL CYS GLU TRP PHE LYS SEQRES 14 B 205 ALA GLY VAL LEU ALA VAL GLY VAL GLY SER ALA LEU VAL SEQRES 15 B 205 LYS GLY THR PRO ASP GLU VAL ARG GLU LYS ALA LYS ALA SEQRES 16 B 205 PHE VAL GLU LYS ILE ARG GLY CYS THR GLU SEQRES 1 C 205 MET LYS MET GLU GLU LEU PHE LYS LYS HIS LYS ILE VAL SEQRES 2 C 205 ALA VAL LEU ARG ALA ASN SER VAL GLU GLU ALA LYS GLU SEQRES 3 C 205 LYS ALA LEU ALA VAL PHE GLU GLY GLY VAL HIS LEU ILE SEQRES 4 C 205 GLU ILE THR PHE THR VAL PRO ASP ALA ASP THR VAL ILE SEQRES 5 C 205 LYS GLU LEU SER PHE LEU LYS GLU LYS GLY ALA ILE ILE SEQRES 6 C 205 GLY ALA GLY THR VAL THR SER VAL GLU GLN CYS ARG LYS SEQRES 7 C 205 ALA VAL GLU SER GLY ALA GLU PHE ILE VAL SER PRO HIS SEQRES 8 C 205 LEU ASP GLU GLU ILE SER GLN PHE CYS LYS GLU LYS GLY SEQRES 9 C 205 VAL PHE TYR MET PRO GLY VAL MET THR PRO THR GLU LEU SEQRES 10 C 205 VAL LYS ALA MET LYS LEU GLY HIS THR ILE LEU LYS LEU SEQRES 11 C 205 PHE PRO GLY GLU VAL VAL GLY PRO GLN PHE VAL LYS ALA SEQRES 12 C 205 MET LYS GLY PRO PHE PRO ASN VAL LYS PHE VAL PRO THR SEQRES 13 C 205 GLY GLY VAL ASN LEU ASP ASN VAL CYS GLU TRP PHE LYS SEQRES 14 C 205 ALA GLY VAL LEU ALA VAL GLY VAL GLY SER ALA LEU VAL SEQRES 15 C 205 LYS GLY THR PRO ASP GLU VAL ARG GLU LYS ALA LYS ALA SEQRES 16 C 205 PHE VAL GLU LYS ILE ARG GLY CYS THR GLU SEQRES 1 D 205 MET LYS MET GLU GLU LEU PHE LYS LYS HIS LYS ILE VAL SEQRES 2 D 205 ALA VAL LEU ARG ALA ASN SER VAL GLU GLU ALA LYS GLU SEQRES 3 D 205 LYS ALA LEU ALA VAL PHE GLU GLY GLY VAL HIS LEU ILE SEQRES 4 D 205 GLU ILE THR PHE THR VAL PRO ASP ALA ASP THR VAL ILE SEQRES 5 D 205 LYS GLU LEU SER PHE LEU LYS GLU LYS GLY ALA ILE ILE SEQRES 6 D 205 GLY ALA GLY THR VAL THR SER VAL GLU GLN CYS ARG LYS SEQRES 7 D 205 ALA VAL GLU SER GLY ALA GLU PHE ILE VAL SER PRO HIS SEQRES 8 D 205 LEU ASP GLU GLU ILE SER GLN PHE CYS LYS GLU LYS GLY SEQRES 9 D 205 VAL PHE TYR MET PRO GLY VAL MET THR PRO THR GLU LEU SEQRES 10 D 205 VAL LYS ALA MET LYS LEU GLY HIS THR ILE LEU LYS LEU SEQRES 11 D 205 PHE PRO GLY GLU VAL VAL GLY PRO GLN PHE VAL LYS ALA SEQRES 12 D 205 MET LYS GLY PRO PHE PRO ASN VAL LYS PHE VAL PRO THR SEQRES 13 D 205 GLY GLY VAL ASN LEU ASP ASN VAL CYS GLU TRP PHE LYS SEQRES 14 D 205 ALA GLY VAL LEU ALA VAL GLY VAL GLY SER ALA LEU VAL SEQRES 15 D 205 LYS GLY THR PRO ASP GLU VAL ARG GLU LYS ALA LYS ALA SEQRES 16 D 205 PHE VAL GLU LYS ILE ARG GLY CYS THR GLU SEQRES 1 E 205 MET LYS MET GLU GLU LEU PHE LYS LYS HIS LYS ILE VAL SEQRES 2 E 205 ALA VAL LEU ARG ALA ASN SER VAL GLU GLU ALA LYS GLU SEQRES 3 E 205 LYS ALA LEU ALA VAL PHE GLU GLY GLY VAL HIS LEU ILE SEQRES 4 E 205 GLU ILE THR PHE THR VAL PRO ASP ALA ASP THR VAL ILE SEQRES 5 E 205 LYS GLU LEU SER PHE LEU LYS GLU LYS GLY ALA ILE ILE SEQRES 6 E 205 GLY ALA GLY THR VAL THR SER VAL GLU GLN CYS ARG LYS SEQRES 7 E 205 ALA VAL GLU SER GLY ALA GLU PHE ILE VAL SER PRO HIS SEQRES 8 E 205 LEU ASP GLU GLU ILE SER GLN PHE CYS LYS GLU LYS GLY SEQRES 9 E 205 VAL PHE TYR MET PRO GLY VAL MET THR PRO THR GLU LEU SEQRES 10 E 205 VAL LYS ALA MET LYS LEU GLY HIS THR ILE LEU LYS LEU SEQRES 11 E 205 PHE PRO GLY GLU VAL VAL GLY PRO GLN PHE VAL LYS ALA SEQRES 12 E 205 MET LYS GLY PRO PHE PRO ASN VAL LYS PHE VAL PRO THR SEQRES 13 E 205 GLY GLY VAL ASN LEU ASP ASN VAL CYS GLU TRP PHE LYS SEQRES 14 E 205 ALA GLY VAL LEU ALA VAL GLY VAL GLY SER ALA LEU VAL SEQRES 15 E 205 LYS GLY THR PRO ASP GLU VAL ARG GLU LYS ALA LYS ALA SEQRES 16 E 205 PHE VAL GLU LYS ILE ARG GLY CYS THR GLU SEQRES 1 F 205 MET LYS MET GLU GLU LEU PHE LYS LYS HIS LYS ILE VAL SEQRES 2 F 205 ALA VAL LEU ARG ALA ASN SER VAL GLU GLU ALA LYS GLU SEQRES 3 F 205 LYS ALA LEU ALA VAL PHE GLU GLY GLY VAL HIS LEU ILE SEQRES 4 F 205 GLU ILE THR PHE THR VAL PRO ASP ALA ASP THR VAL ILE SEQRES 5 F 205 LYS GLU LEU SER PHE LEU LYS GLU LYS GLY ALA ILE ILE SEQRES 6 F 205 GLY ALA GLY THR VAL THR SER VAL GLU GLN CYS ARG LYS SEQRES 7 F 205 ALA VAL GLU SER GLY ALA GLU PHE ILE VAL SER PRO HIS SEQRES 8 F 205 LEU ASP GLU GLU ILE SER GLN PHE CYS LYS GLU LYS GLY SEQRES 9 F 205 VAL PHE TYR MET PRO GLY VAL MET THR PRO THR GLU LEU SEQRES 10 F 205 VAL LYS ALA MET LYS LEU GLY HIS THR ILE LEU LYS LEU SEQRES 11 F 205 PHE PRO GLY GLU VAL VAL GLY PRO GLN PHE VAL LYS ALA SEQRES 12 F 205 MET LYS GLY PRO PHE PRO ASN VAL LYS PHE VAL PRO THR SEQRES 13 F 205 GLY GLY VAL ASN LEU ASP ASN VAL CYS GLU TRP PHE LYS SEQRES 14 F 205 ALA GLY VAL LEU ALA VAL GLY VAL GLY SER ALA LEU VAL SEQRES 15 F 205 LYS GLY THR PRO ASP GLU VAL ARG GLU LYS ALA LYS ALA SEQRES 16 F 205 PHE VAL GLU LYS ILE ARG GLY CYS THR GLU HET PYR A1204 5 HET SO4 A1205 5 HET PYR B1204 5 HET SO4 B1205 5 HET PYR C1204 5 HET SO4 C1205 5 HET PYR D1205 5 HET SO4 D1206 5 HET PYR E1204 5 HET SO4 E1205 5 HET PYR F1204 5 HET SO4 F1205 5 HETNAM PYR PYRUVIC ACID HETNAM SO4 SULFATE ION FORMUL 7 PYR 6(C3 H4 O3) FORMUL 8 SO4 6(O4 S 2-) FORMUL 19 HOH *306(H2 O) HELIX 1 1 LYS A 2 LYS A 11 1 10 HELIX 2 2 SER A 20 GLY A 34 1 15 HELIX 3 3 ASP A 47 LEU A 55 1 9 HELIX 4 4 LEU A 55 LYS A 61 1 7 HELIX 5 5 SER A 72 GLY A 83 1 12 HELIX 6 6 ASP A 93 GLY A 104 1 12 HELIX 7 7 THR A 113 LEU A 123 1 11 HELIX 8 8 PRO A 132 GLY A 146 1 15 HELIX 9 9 ASN A 163 GLY A 171 1 9 HELIX 10 10 GLY A 178 LYS A 183 1 6 HELIX 11 11 THR A 185 CYS A 203 1 19 HELIX 12 12 LYS B 2 LYS B 11 1 10 HELIX 13 13 SER B 20 GLY B 34 1 15 HELIX 14 14 ASP B 47 LEU B 55 1 9 HELIX 15 15 SER B 56 GLY B 62 5 7 HELIX 16 16 SER B 72 SER B 82 1 11 HELIX 17 17 ASP B 93 GLY B 104 1 12 HELIX 18 18 THR B 113 LEU B 123 1 11 HELIX 19 19 PRO B 132 GLY B 146 1 15 HELIX 20 20 ASN B 163 GLY B 171 1 9 HELIX 21 21 GLY B 178 LYS B 183 1 6 HELIX 22 22 THR B 185 CYS B 203 1 19 HELIX 23 23 MET C 3 LYS C 11 1 9 HELIX 24 24 SER C 20 GLY C 34 1 15 HELIX 25 25 ASP C 47 SER C 56 1 10 HELIX 26 26 PHE C 57 GLY C 62 5 6 HELIX 27 27 SER C 72 SER C 82 1 11 HELIX 28 28 ASP C 93 GLY C 104 1 12 HELIX 29 29 THR C 113 LEU C 123 1 11 HELIX 30 30 PRO C 132 GLY C 146 1 15 HELIX 31 31 ASN C 163 GLY C 171 1 9 HELIX 32 32 GLY C 178 LYS C 183 1 6 HELIX 33 33 THR C 185 GLY C 202 1 18 HELIX 34 34 LYS D 2 LYS D 11 1 10 HELIX 35 35 SER D 20 GLY D 34 1 15 HELIX 36 36 ASP D 47 LEU D 55 1 9 HELIX 37 37 LEU D 55 LYS D 61 1 7 HELIX 38 38 SER D 72 SER D 82 1 11 HELIX 39 39 ASP D 93 GLY D 104 1 12 HELIX 40 40 THR D 113 LEU D 123 1 11 HELIX 41 41 PRO D 132 GLY D 137 1 6 HELIX 42 42 GLY D 137 GLY D 146 1 10 HELIX 43 43 ASN D 163 ALA D 170 1 8 HELIX 44 44 GLY D 178 LYS D 183 1 6 HELIX 45 45 THR D 185 THR D 204 1 20 HELIX 46 46 LYS E 2 LYS E 11 1 10 HELIX 47 47 SER E 20 GLY E 34 1 15 HELIX 48 48 ASP E 47 LEU E 55 1 9 HELIX 49 49 LEU E 55 GLU E 60 1 6 HELIX 50 50 SER E 72 SER E 82 1 11 HELIX 51 51 ASP E 93 GLY E 104 1 12 HELIX 52 52 THR E 113 LEU E 123 1 11 HELIX 53 53 PRO E 132 GLY E 137 1 6 HELIX 54 54 GLY E 137 LYS E 145 1 9 HELIX 55 55 ASN E 163 ALA E 170 1 8 HELIX 56 56 GLY E 178 LYS E 183 1 6 HELIX 57 57 THR E 185 CYS E 203 1 19 HELIX 58 58 MET F 3 LYS F 11 1 9 HELIX 59 59 SER F 20 GLY F 35 1 16 HELIX 60 60 ASP F 47 LEU F 55 1 9 HELIX 61 61 SER F 56 LYS F 61 1 6 HELIX 62 62 SER F 72 SER F 82 1 11 HELIX 63 63 ASP F 93 GLY F 104 1 12 HELIX 64 64 THR F 113 LEU F 123 1 11 HELIX 65 65 PRO F 132 GLY F 146 1 15 HELIX 66 66 ASN F 163 GLY F 171 1 9 HELIX 67 67 GLY F 178 LYS F 183 1 6 HELIX 68 68 THR F 185 GLY F 202 1 18 SHEET 1 AA 4 ILE A 64 GLY A 68 0 SHEET 2 AA 4 LEU A 38 THR A 42 1 O ILE A 39 N GLY A 66 SHEET 3 AA 4 ILE A 12 LEU A 16 1 O ILE A 12 N LEU A 38 SHEET 4 AA 4 VAL A 175 VAL A 177 1 O VAL A 175 N VAL A 13 SHEET 1 AB 2 PHE A 86 VAL A 88 0 SHEET 2 AB 2 PHE A 106 MET A 108 1 O PHE A 106 N ILE A 87 SHEET 1 AC 3 GLY A 110 VAL A 111 0 SHEET 2 AC 3 ILE A 127 LEU A 130 1 O LYS A 129 N VAL A 111 SHEET 3 AC 3 LYS A 152 PRO A 155 1 O LYS A 152 N LEU A 128 SHEET 1 BA 4 ILE B 64 GLY B 68 0 SHEET 2 BA 4 LEU B 38 THR B 42 1 O ILE B 39 N GLY B 66 SHEET 3 BA 4 ILE B 12 LEU B 16 1 O ILE B 12 N LEU B 38 SHEET 4 BA 4 VAL B 175 VAL B 177 1 O VAL B 175 N VAL B 13 SHEET 1 BB 2 PHE B 86 VAL B 88 0 SHEET 2 BB 2 PHE B 106 MET B 108 1 O PHE B 106 N ILE B 87 SHEET 1 BC 3 GLY B 110 VAL B 111 0 SHEET 2 BC 3 ILE B 127 LEU B 130 1 O LYS B 129 N VAL B 111 SHEET 3 BC 3 LYS B 152 PRO B 155 1 O LYS B 152 N LEU B 128 SHEET 1 CA 4 ILE C 64 GLY C 68 0 SHEET 2 CA 4 LEU C 38 THR C 42 1 O ILE C 39 N GLY C 66 SHEET 3 CA 4 ILE C 12 LEU C 16 1 O ILE C 12 N LEU C 38 SHEET 4 CA 4 VAL C 175 VAL C 177 1 O VAL C 175 N VAL C 13 SHEET 1 CB 2 PHE C 86 VAL C 88 0 SHEET 2 CB 2 PHE C 106 MET C 108 1 O PHE C 106 N ILE C 87 SHEET 1 CC 3 GLY C 110 VAL C 111 0 SHEET 2 CC 3 ILE C 127 LEU C 130 1 O LYS C 129 N VAL C 111 SHEET 3 CC 3 LYS C 152 PRO C 155 1 O LYS C 152 N LEU C 128 SHEET 1 DA 4 ILE D 64 GLY D 68 0 SHEET 2 DA 4 LEU D 38 THR D 42 1 O ILE D 39 N GLY D 66 SHEET 3 DA 4 ILE D 12 LEU D 16 1 O ILE D 12 N LEU D 38 SHEET 4 DA 4 VAL D 175 VAL D 177 1 O VAL D 175 N VAL D 13 SHEET 1 DB 2 PHE D 86 VAL D 88 0 SHEET 2 DB 2 PHE D 106 MET D 108 1 O PHE D 106 N ILE D 87 SHEET 1 DC 3 GLY D 110 VAL D 111 0 SHEET 2 DC 3 ILE D 127 LEU D 130 1 O LYS D 129 N VAL D 111 SHEET 3 DC 3 LYS D 152 PRO D 155 1 O LYS D 152 N LEU D 128 SHEET 1 EA 4 ILE E 64 GLY E 68 0 SHEET 2 EA 4 LEU E 38 THR E 42 1 O ILE E 39 N GLY E 66 SHEET 3 EA 4 ILE E 12 LEU E 16 1 O ILE E 12 N LEU E 38 SHEET 4 EA 4 VAL E 175 VAL E 177 1 O VAL E 175 N VAL E 13 SHEET 1 EB 2 PHE E 86 VAL E 88 0 SHEET 2 EB 2 PHE E 106 MET E 108 1 O PHE E 106 N ILE E 87 SHEET 1 EC 3 GLY E 110 VAL E 111 0 SHEET 2 EC 3 ILE E 127 LEU E 130 1 O LYS E 129 N VAL E 111 SHEET 3 EC 3 LYS E 152 PRO E 155 1 O LYS E 152 N LEU E 128 SHEET 1 FA 4 ILE F 64 GLY F 68 0 SHEET 2 FA 4 LEU F 38 THR F 42 1 O ILE F 39 N GLY F 66 SHEET 3 FA 4 ILE F 12 LEU F 16 1 O ILE F 12 N LEU F 38 SHEET 4 FA 4 VAL F 175 VAL F 177 1 O VAL F 175 N VAL F 13 SHEET 1 FB 2 PHE F 86 VAL F 88 0 SHEET 2 FB 2 PHE F 106 MET F 108 1 O PHE F 106 N ILE F 87 SHEET 1 FC 3 GLY F 110 VAL F 111 0 SHEET 2 FC 3 ILE F 127 LEU F 130 1 O LYS F 129 N VAL F 111 SHEET 3 FC 3 LYS F 152 PRO F 155 1 O LYS F 152 N LEU F 128 SSBOND 1 CYS A 165 CYS A 203 1555 1555 2.07 SSBOND 2 CYS B 165 CYS B 203 1555 1555 2.13 SSBOND 3 CYS C 165 CYS C 203 1555 1555 2.06 SSBOND 4 CYS D 165 CYS D 203 1555 1555 2.08 SSBOND 5 CYS E 165 CYS E 203 1555 1555 2.08 SSBOND 6 CYS F 165 CYS F 203 1555 1555 2.05 LINK NZ LYS A 129 CA PYR A1204 1555 1555 1.34 LINK NZ LYS B 129 CA PYR B1204 1555 1555 1.34 LINK NZ LYS C 129 CA PYR C1204 1555 1555 1.33 LINK NZ LYS D 129 CA PYR D1205 1555 1555 1.34 LINK NZ LYS E 129 CA PYR E1204 1555 1555 1.34 LINK NZ LYS F 129 CA PYR F1204 1555 1555 1.34 CISPEP 1 PHE A 131 PRO A 132 0 -1.25 CISPEP 2 PHE B 131 PRO B 132 0 -2.54 CISPEP 3 PHE C 131 PRO C 132 0 1.02 CISPEP 4 PHE D 131 PRO D 132 0 -3.98 CISPEP 5 PHE E 131 PRO E 132 0 0.19 CISPEP 6 PHE F 131 PRO F 132 0 -4.73 SITE 1 AC1 9 GLY A 157 GLY A 158 GLY A 178 SER A 179 SITE 2 AC1 9 HOH A2008 HOH A2065 HOH A2073 HOH A2074 SITE 3 AC1 9 HOH B2050 SITE 1 AC2 11 THR B 156 GLY B 157 GLY B 158 GLY B 178 SITE 2 AC2 11 SER B 179 HOH B2047 HOH B2069 HOH B2070 SITE 3 AC2 11 HOH B2071 HOH B2072 HOH B2073 SITE 1 AC3 8 GLY C 157 GLY C 158 GLY C 178 SER C 179 SITE 2 AC3 8 HOH C2027 HOH C2038 HOH C2040 HOH C2041 SITE 1 AC4 7 GLY D 158 GLY D 178 SER D 179 HOH D2042 SITE 2 AC4 7 HOH D2045 HOH D2049 HOH E2032 SITE 1 AC5 7 GLY E 157 GLY E 158 GLY E 178 SER E 179 SITE 2 AC5 7 HOH E2004 HOH E2036 HOH E2046 SITE 1 AC6 9 GLY F 157 GLY F 158 GLY F 178 SER F 179 SITE 2 AC6 9 HOH F2015 HOH F2020 HOH F2021 HOH F2022 SITE 3 AC6 9 HOH F2023 SITE 1 AC7 7 ARG A 17 THR A 69 VAL A 88 SER A 89 SITE 2 AC7 7 PRO A 90 LYS A 129 PHE A 131 SITE 1 AC8 9 ARG B 17 GLY B 68 THR B 69 VAL B 88 SITE 2 AC8 9 SER B 89 PRO B 90 LYS B 129 PHE B 131 SITE 3 AC8 9 HOH B2045 SITE 1 AC9 6 ARG C 17 THR C 69 SER C 89 PRO C 90 SITE 2 AC9 6 LYS C 129 PHE C 131 SITE 1 BC1 6 ARG D 17 THR D 69 SER D 89 PRO D 90 SITE 2 BC1 6 LYS D 129 PHE D 131 SITE 1 BC2 7 ARG E 17 THR E 69 VAL E 88 SER E 89 SITE 2 BC2 7 PRO E 90 LYS E 129 PHE E 131 SITE 1 BC3 8 ARG F 17 GLU F 40 THR F 69 VAL F 88 SITE 2 BC3 8 SER F 89 PRO F 90 LYS F 129 PHE F 131 CRYST1 42.600 101.100 124.600 90.00 97.20 90.00 P 1 21 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023474 0.000000 0.002965 0.00000 SCALE2 0.000000 0.009891 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008089 0.00000