HEADER LYASE 08-NOV-04 1WC4 TITLE SOLUBLE ADENYLYL CYCLASE CYAC FROM S. PLATENSIS IN COMPLEX WITH ALPHA, TITLE 2 BETA-METHYLENE-ATP AND EUROPIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENYLATE CYCLASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC DOMAIN, RESIDUES 1005-1202; COMPND 5 SYNONYM: SOLUBLE ADENYLYL CYCLASE CYAC; COMPND 6 EC: 4.6.1.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SPIRULINA PLATENSIS; SOURCE 3 ORGANISM_TAXID: 118562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PET KEYWDS CYCLASE, SOLUBLE ADENYLYL CYCLASE, CAMP SIGNALING, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR C.STEEGBORN,T.N.LITVIN,L.R.LEVIN,J.BUCK,H.WU REVDAT 4 13-DEC-23 1WC4 1 REMARK REVDAT 3 24-FEB-09 1WC4 1 VERSN REVDAT 2 15-JUN-05 1WC4 1 JRNL REVDAT 1 20-DEC-04 1WC4 0 JRNL AUTH C.STEEGBORN,T.N.LITVIN,L.R.LEVIN,J.BUCK,H.WU JRNL TITL BICARBONATE ACTIVATION OF ADENYLYL CYCLASE VIA PROMOTION OF JRNL TITL 2 CATALYTIC ACTIVE SITE CLOSURE AND METAL RECRUITMENT JRNL REF NAT.STRUCT.MOL.BIOL. V. 12 32 2005 JRNL REFN ISSN 1545-9993 JRNL PMID 15619637 JRNL DOI 10.1038/NSMB880 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 188864.720 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 71.1 REMARK 3 NUMBER OF REFLECTIONS : 5601 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.274 REMARK 3 FREE R VALUE : 0.315 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.300 REMARK 3 FREE R VALUE TEST SET COUNT : 407 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.016 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.19 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 50.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 608 REMARK 3 BIN R VALUE (WORKING SET) : 0.2980 REMARK 3 BIN FREE R VALUE : 0.3490 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 7.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 47 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.051 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3041 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 2 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -7.30000 REMARK 3 B22 (A**2) : 20.16000 REMARK 3 B33 (A**2) : -12.86000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.43 REMARK 3 ESD FROM SIGMAA (A) : 0.41 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.56 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.42 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.990 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : OVERALL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.28 REMARK 3 BSOL : 10.00 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : APC_NEW.PAR REMARK 3 PARAMETER FILE 4 : WATER.PARAM REMARK 3 PARAMETER FILE 5 : EU.PAR REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ION.TOP REMARK 3 TOPOLOGY FILE 3 : APC.TOP REMARK 3 TOPOLOGY FILE 4 : WATER.TOP REMARK 3 TOPOLOGY FILE 5 : EU.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WC4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-NOV-04. REMARK 100 THE DEPOSITION ID IS D_1290021583. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97911 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8038 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1WC0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.80050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.82700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.10100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.82700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.80050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.10100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 984 REMARK 465 GLY A 985 REMARK 465 SER A 986 REMARK 465 SER A 987 REMARK 465 HIS A 988 REMARK 465 HIS A 989 REMARK 465 HIS A 990 REMARK 465 HIS A 991 REMARK 465 HIS A 992 REMARK 465 HIS A 993 REMARK 465 SER A 994 REMARK 465 SER A 995 REMARK 465 GLY A 996 REMARK 465 LEU A 997 REMARK 465 VAL A 998 REMARK 465 PRO A 999 REMARK 465 ARG A 1000 REMARK 465 GLY A 1001 REMARK 465 GLN A 1202 REMARK 465 MET B 984 REMARK 465 GLY B 985 REMARK 465 SER B 986 REMARK 465 SER B 987 REMARK 465 HIS B 988 REMARK 465 HIS B 989 REMARK 465 HIS B 990 REMARK 465 HIS B 991 REMARK 465 HIS B 992 REMARK 465 HIS B 993 REMARK 465 SER B 994 REMARK 465 SER B 995 REMARK 465 GLY B 996 REMARK 465 LEU B 997 REMARK 465 VAL B 998 REMARK 465 PRO B 999 REMARK 465 ARG B 1000 REMARK 465 GLY B 1001 REMARK 465 SER B 1002 REMARK 465 HIS B 1003 REMARK 465 ASN B 1109 REMARK 465 GLU B 1110 REMARK 465 GLN B 1202 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A1201 CA C O CB CG OD1 ND2 REMARK 470 ASN B1201 CA C O CB CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP B 1017 EU EU3 B 2100 2.04 REMARK 500 O1B APC B 1500 EU EU3 B 2100 2.13 REMARK 500 O SER A 1132 N GLU A 1134 2.13 REMARK 500 OG1 THR B 1022 O1G APC B 1500 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 THR A1022 N - CA - CB ANGL. DEV. = 12.7 DEGREES REMARK 500 THR A1022 CA - C - N ANGL. DEV. = -19.5 DEGREES REMARK 500 LEU B1028 CA - CB - CG ANGL. DEV. = -14.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A1021 -75.10 -77.79 REMARK 500 ARG A1023 -56.90 -177.97 REMARK 500 SER A1030 -74.78 -27.29 REMARK 500 ALA A1069 138.91 -174.25 REMARK 500 GLN A1133 -46.84 7.81 REMARK 500 PRO A1197 6.93 -69.85 REMARK 500 LEU A1200 132.82 76.68 REMARK 500 PHE B1021 -83.39 -50.19 REMARK 500 THR B1022 -66.55 -21.98 REMARK 500 SER B1030 -54.37 -21.16 REMARK 500 TYR B1040 -74.56 -43.68 REMARK 500 ALA B1069 138.86 -173.13 REMARK 500 GLU B1102 -7.94 -51.61 REMARK 500 ALA B1125 134.93 -172.97 REMARK 500 SER B1132 -169.32 -168.21 REMARK 500 ARG B1135 137.75 -170.92 REMARK 500 GLU B1179 134.50 179.47 REMARK 500 MET B1199 133.04 152.24 REMARK 500 LEU B1200 154.06 56.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EU3 A2100 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EU3 B2100 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE APC A1500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE APC B1500 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1WC0 RELATED DB: PDB REMARK 900 SOLUBLE ADENYLYL CYCLASE CYAC FROM S. PLATENSIS IN COMPLEX WITH REMARK 900 ALPHA,BETA- METHYLENE-ATP REMARK 900 RELATED ID: 1WC1 RELATED DB: PDB REMARK 900 SOLUBLE ADENYLYL CYCLASE CYAC FROM S. PLATENSIS IN COMPLEX WITH RP- REMARK 900 ATPALPHAS REMARK 900 RELATED ID: 1WC3 RELATED DB: PDB REMARK 900 SOLUBLE ADENYLYL CYCLASE CYAC FROM S. PLATENSIS IN COMPLEX WITH REMARK 900 ALPHA,BETA- METHYLENE-ATP AND STRONTIUM REMARK 900 RELATED ID: 1WC5 RELATED DB: PDB REMARK 900 SOLUBLE ADENYLYL CYCLASE CYAC FROM S. PLATENSIS IN COMPLEX WITH REMARK 900 ALPHA,BETA- METHYLENE-ATP IN PRESENCE OF BICARBONATE REMARK 900 RELATED ID: 1WC6 RELATED DB: PDB REMARK 900 SOLUBLE ADENYLYL CYCLASE CYAC FROM S. PLATENSIS IN COMPLEX WITH RP- REMARK 900 ATPALPHAS IN PRESENCE OF BICARBONATE REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE PROTEIN WAS EXPRESSED WITH N-TERMNAL HIS-TAG CONSTRUCT REMARK 999 COMPRISING OF RESIDUES MARKED AS 984-1004. SER 1002, HIS REMARK 999 1003 AND MET 1004 ARE CLONING ARTEFACTS FROM THIS REMARK 999 THIS CONSTRUCT. DBREF 1WC4 A 984 1004 PDB 1WC4 1WC4 984 1004 DBREF 1WC4 A 1005 1202 UNP O32393 O32393 1005 1202 DBREF 1WC4 B 984 1004 PDB 1WC4 1WC4 984 1004 DBREF 1WC4 B 1005 1202 UNP O32393 O32393 1005 1202 SEQRES 1 A 219 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 219 LEU VAL PRO ARG GLY SER HIS MET ARG PRO GLU PRO ARG SEQRES 3 A 219 LEU ILE THR ILE LEU PHE SER ASP ILE VAL GLY PHE THR SEQRES 4 A 219 ARG MET SER ASN ALA LEU GLN SER GLN GLY VAL ALA GLU SEQRES 5 A 219 LEU LEU ASN GLU TYR LEU GLY GLU MET THR ARG ALA VAL SEQRES 6 A 219 PHE GLU ASN GLN GLY THR VAL ASP LYS PHE VAL GLY ASP SEQRES 7 A 219 ALA ILE MET ALA LEU TYR GLY ALA PRO GLU GLU MET SER SEQRES 8 A 219 PRO SER GLU GLN VAL ARG ARG ALA ILE ALA THR ALA ARG SEQRES 9 A 219 GLN MET LEU VAL ALA LEU GLU LYS LEU ASN GLN GLY TRP SEQRES 10 A 219 GLN GLU ARG GLY LEU VAL GLY ARG ASN GLU VAL PRO PRO SEQRES 11 A 219 VAL ARG PHE ARG CYS GLY ILE HIS GLN GLY MET ALA VAL SEQRES 12 A 219 VAL GLY LEU PHE GLY SER GLN GLU ARG SER ASP PHE THR SEQRES 13 A 219 ALA ILE GLY PRO SER VAL ASN ILE ALA ALA ARG LEU GLN SEQRES 14 A 219 GLU ALA THR ALA PRO ASN SER ILE MET VAL SER ALA MET SEQRES 15 A 219 VAL ALA GLN TYR VAL PRO ASP GLU GLU ILE ILE LYS ARG SEQRES 16 A 219 GLU PHE LEU GLU LEU LYS GLY ILE ASP GLU PRO VAL MET SEQRES 17 A 219 THR CYS VAL ILE ASN PRO ASN MET LEU ASN GLN SEQRES 1 B 219 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 219 LEU VAL PRO ARG GLY SER HIS MET ARG PRO GLU PRO ARG SEQRES 3 B 219 LEU ILE THR ILE LEU PHE SER ASP ILE VAL GLY PHE THR SEQRES 4 B 219 ARG MET SER ASN ALA LEU GLN SER GLN GLY VAL ALA GLU SEQRES 5 B 219 LEU LEU ASN GLU TYR LEU GLY GLU MET THR ARG ALA VAL SEQRES 6 B 219 PHE GLU ASN GLN GLY THR VAL ASP LYS PHE VAL GLY ASP SEQRES 7 B 219 ALA ILE MET ALA LEU TYR GLY ALA PRO GLU GLU MET SER SEQRES 8 B 219 PRO SER GLU GLN VAL ARG ARG ALA ILE ALA THR ALA ARG SEQRES 9 B 219 GLN MET LEU VAL ALA LEU GLU LYS LEU ASN GLN GLY TRP SEQRES 10 B 219 GLN GLU ARG GLY LEU VAL GLY ARG ASN GLU VAL PRO PRO SEQRES 11 B 219 VAL ARG PHE ARG CYS GLY ILE HIS GLN GLY MET ALA VAL SEQRES 12 B 219 VAL GLY LEU PHE GLY SER GLN GLU ARG SER ASP PHE THR SEQRES 13 B 219 ALA ILE GLY PRO SER VAL ASN ILE ALA ALA ARG LEU GLN SEQRES 14 B 219 GLU ALA THR ALA PRO ASN SER ILE MET VAL SER ALA MET SEQRES 15 B 219 VAL ALA GLN TYR VAL PRO ASP GLU GLU ILE ILE LYS ARG SEQRES 16 B 219 GLU PHE LEU GLU LEU LYS GLY ILE ASP GLU PRO VAL MET SEQRES 17 B 219 THR CYS VAL ILE ASN PRO ASN MET LEU ASN GLN HET APC A1500 31 HET EU3 A2100 1 HET APC B1500 31 HET EU3 B2100 1 HETNAM APC DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER HETNAM EU3 EUROPIUM (III) ION HETSYN APC ALPHA,BETA-METHYLENEADENOSINE-5'-TRIPHOSPHATE FORMUL 3 APC 2(C11 H18 N5 O12 P3) FORMUL 4 EU3 2(EU 3+) FORMUL 7 HOH *2(H2 O) HELIX 1 1 GLY A 1020 SER A 1025 1 6 HELIX 2 2 ASN A 1026 LEU A 1028 5 3 HELIX 3 3 GLN A 1029 GLU A 1050 1 22 HELIX 4 4 SER A 1074 GLU A 1102 1 29 HELIX 5 5 GLY A 1142 THR A 1155 1 14 HELIX 6 6 ALA A 1164 GLN A 1168 1 5 HELIX 7 7 PRO A 1171 GLU A 1173 5 3 HELIX 8 8 GLY B 1020 ASN B 1026 1 7 HELIX 9 9 GLN B 1029 GLU B 1050 1 22 HELIX 10 10 SER B 1074 GLU B 1102 1 29 HELIX 11 11 GLY B 1142 THR B 1155 1 14 HELIX 12 12 ALA B 1164 GLN B 1168 1 5 HELIX 13 13 PRO B 1171 GLU B 1173 5 3 SHEET 1 AA 7 THR A1054 VAL A1059 0 SHEET 2 AA 7 ALA A1062 TYR A1067 -1 O ALA A1062 N VAL A1059 SHEET 3 AA 7 LEU A1010 VAL A1019 -1 O THR A1012 N TYR A1067 SHEET 4 AA 7 ARG A1115 MET A1124 -1 O ARG A1115 N VAL A1019 SHEET 5 AA 7 SER A1159 SER A1163 1 O SER A1159 N CYS A1118 SHEET 6 AA 7 VAL A1190 ILE A1195 -1 O CYS A1193 N VAL A1162 SHEET 7 AA 7 ILE A1175 LEU A1181 -1 N ILE A1176 O VAL A1194 SHEET 1 AB 2 VAL A1126 SER A1132 0 SHEET 2 AB 2 ARG A1135 ILE A1141 -1 O ARG A1135 N SER A1132 SHEET 1 BA 7 THR B1054 VAL B1059 0 SHEET 2 BA 7 ALA B1062 TYR B1067 -1 O ALA B1062 N VAL B1059 SHEET 3 BA 7 GLU B1007 VAL B1019 -1 O THR B1012 N TYR B1067 SHEET 4 BA 7 ARG B1115 GLY B1131 -1 O ARG B1115 N VAL B1019 SHEET 5 BA 7 SER B1159 SER B1163 1 O SER B1159 N CYS B1118 SHEET 6 BA 7 VAL B1190 ILE B1195 -1 O CYS B1193 N VAL B1162 SHEET 7 BA 7 ILE B1175 LEU B1181 -1 N ILE B1176 O VAL B1194 SHEET 1 BB 5 THR B1054 VAL B1059 0 SHEET 2 BB 5 ALA B1062 TYR B1067 -1 O ALA B1062 N VAL B1059 SHEET 3 BB 5 GLU B1007 VAL B1019 -1 O THR B1012 N TYR B1067 SHEET 4 BB 5 ARG B1115 GLY B1131 -1 O ARG B1115 N VAL B1019 SHEET 5 BB 5 SER B1136 ILE B1141 -1 O ASP B1137 N PHE B1130 CISPEP 1 ALA A 1069 PRO A 1070 0 0.29 CISPEP 2 ALA B 1069 PRO B 1070 0 0.34 SITE 1 AC1 4 ASP A1017 ILE A1018 ASP A1061 APC A1500 SITE 1 AC2 4 ASP B1017 ILE B1018 ASP B1061 APC B1500 SITE 1 AC3 19 ILE A1018 VAL A1019 GLY A1020 PHE A1021 SITE 2 AC3 19 THR A1022 VAL A1059 GLY A1060 HOH A2001 SITE 3 AC3 19 EU3 A2100 PHE B1015 LYS B1057 MET B1064 SITE 4 AC3 19 THR B1139 ALA B1140 ILE B1141 VAL B1145 SITE 5 AC3 19 ASN B1146 ARG B1150 LYS B1184 SITE 1 AC4 18 LYS A1057 MET A1064 THR A1139 ALA A1140 SITE 2 AC4 18 ILE A1141 VAL A1145 ASN A1146 ARG A1150 SITE 3 AC4 18 LYS A1184 ASP B1017 ILE B1018 GLY B1020 SITE 4 AC4 18 PHE B1021 THR B1022 GLY B1060 ASP B1061 SITE 5 AC4 18 HOH B2001 EU3 B2100 CRYST1 53.601 70.202 99.654 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018656 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014245 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010035 0.00000