data_1WF0 # _entry.id 1WF0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1WF0 pdb_00001wf0 10.2210/pdb1wf0/pdb RCSB RCSB023506 ? ? WWPDB D_1000023506 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hss001001277.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1WF0 _pdbx_database_status.recvd_initial_deposition_date 2004-05-25 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'He, F.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Shirouzu, M.' 5 'Terada, T.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of RRM domain in TAR DNA-binding protein-43' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'He, F.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Shirouzu, M.' 5 ? primary 'Terada, T.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'TAR DNA-binding protein-43' _entity.formula_weight 9416.364 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'RRM domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name TDP-43 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCGEDLIIKGISVHISNAEPKHN SNSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCGEDLIIKGISVHISNAEPKHN SNSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hss001001277.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 VAL n 1 9 PHE n 1 10 VAL n 1 11 GLY n 1 12 ARG n 1 13 CYS n 1 14 THR n 1 15 GLY n 1 16 ASP n 1 17 MET n 1 18 THR n 1 19 GLU n 1 20 ASP n 1 21 GLU n 1 22 LEU n 1 23 ARG n 1 24 GLU n 1 25 PHE n 1 26 PHE n 1 27 SER n 1 28 GLN n 1 29 TYR n 1 30 GLY n 1 31 ASP n 1 32 VAL n 1 33 MET n 1 34 ASP n 1 35 VAL n 1 36 PHE n 1 37 ILE n 1 38 PRO n 1 39 LYS n 1 40 PRO n 1 41 PHE n 1 42 ARG n 1 43 ALA n 1 44 PHE n 1 45 ALA n 1 46 PHE n 1 47 VAL n 1 48 THR n 1 49 PHE n 1 50 ALA n 1 51 ASP n 1 52 ASP n 1 53 GLN n 1 54 ILE n 1 55 ALA n 1 56 GLN n 1 57 SER n 1 58 LEU n 1 59 CYS n 1 60 GLY n 1 61 GLU n 1 62 ASP n 1 63 LEU n 1 64 ILE n 1 65 ILE n 1 66 LYS n 1 67 GLY n 1 68 ILE n 1 69 SER n 1 70 VAL n 1 71 HIS n 1 72 ILE n 1 73 SER n 1 74 ASN n 1 75 ALA n 1 76 GLU n 1 77 PRO n 1 78 LYS n 1 79 HIS n 1 80 ASN n 1 81 SER n 1 82 ASN n 1 83 SER n 1 84 GLY n 1 85 PRO n 1 86 SER n 1 87 SER n 1 88 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene HEP00195 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TADBP_HUMAN _struct_ref.pdbx_db_accession Q13148 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code VFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCGEDLIIKGISVHISNAEPKHNSN _struct_ref.pdbx_align_begin 193 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1WF0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 82 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q13148 _struct_ref_seq.db_align_beg 193 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 267 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 82 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1WF0 GLY A 1 ? UNP Q13148 ? ? 'cloning artifact' 1 1 1 1WF0 SER A 2 ? UNP Q13148 ? ? 'cloning artifact' 2 2 1 1WF0 SER A 3 ? UNP Q13148 ? ? 'cloning artifact' 3 3 1 1WF0 GLY A 4 ? UNP Q13148 ? ? 'cloning artifact' 4 4 1 1WF0 SER A 5 ? UNP Q13148 ? ? 'cloning artifact' 5 5 1 1WF0 SER A 6 ? UNP Q13148 ? ? 'cloning artifact' 6 6 1 1WF0 GLY A 7 ? UNP Q13148 ? ? 'cloning artifact' 7 7 1 1WF0 GLY A 15 ? UNP Q13148 GLU 200 'SEE REMARK 999' 15 8 1 1WF0 SER A 83 ? UNP Q13148 ? ? 'cloning artifact' 83 9 1 1WF0 GLY A 84 ? UNP Q13148 ? ? 'cloning artifact' 84 10 1 1WF0 PRO A 85 ? UNP Q13148 ? ? 'cloning artifact' 85 11 1 1WF0 SER A 86 ? UNP Q13148 ? ? 'cloning artifact' 86 12 1 1WF0 SER A 87 ? UNP Q13148 ? ? 'cloning artifact' 87 13 1 1WF0 GLY A 88 ? UNP Q13148 ? ? 'cloning artifact' 88 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 3D_15N-separated_NOESY 2 1 1 3D_13C-separated_NOESY # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.8mM U-15, 13C; 20mM d-Tris-HCl(pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.field_strength 800 # _pdbx_nmr_refine.entry_id 1WF0 _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1WF0 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations, structures with the lowest energy, target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1WF0 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal XwinNMR 2.6 collection Bruker 1 NMRPipe 20020425 processing Delaglio,F. 2 NMRView 5.0.4 'data analysis' Johnson,B.A. 3 KUJIRA 0.863 'data analysis' Cobayashi,N. 4 CYANA 1.0.8 'structure solution' Guentert,P. 5 CYANA 1.0.8 refinement Guentert,P. 6 # _exptl.entry_id 1WF0 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1WF0 _struct.title 'Solution structure of RRM domain in TAR DNA-binding protein-43' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1WF0 _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text ;structural genomics, RRM domain, TAR DNA-binding protein-43, RIKEN Structural Genomics/Proteomics Initiative, RSGI, RNA binding protein ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 19 ? PHE A 26 ? GLU A 19 PHE A 26 1 ? 8 HELX_P HELX_P2 2 SER A 27 ? TYR A 29 ? SER A 27 TYR A 29 1 ? 3 HELX_P HELX_P3 3 ASP A 52 ? LEU A 58 ? ASP A 52 LEU A 58 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LYS 39 A . ? LYS 39 A PRO 40 A ? PRO 40 A 1 -0.17 2 LYS 39 A . ? LYS 39 A PRO 40 A ? PRO 40 A 2 -0.08 3 LYS 39 A . ? LYS 39 A PRO 40 A ? PRO 40 A 3 -0.20 4 LYS 39 A . ? LYS 39 A PRO 40 A ? PRO 40 A 4 -0.19 5 LYS 39 A . ? LYS 39 A PRO 40 A ? PRO 40 A 5 -0.09 6 LYS 39 A . ? LYS 39 A PRO 40 A ? PRO 40 A 6 -0.03 7 LYS 39 A . ? LYS 39 A PRO 40 A ? PRO 40 A 7 0.06 8 LYS 39 A . ? LYS 39 A PRO 40 A ? PRO 40 A 8 -0.11 9 LYS 39 A . ? LYS 39 A PRO 40 A ? PRO 40 A 9 0.03 10 LYS 39 A . ? LYS 39 A PRO 40 A ? PRO 40 A 10 -0.13 11 LYS 39 A . ? LYS 39 A PRO 40 A ? PRO 40 A 11 -0.14 12 LYS 39 A . ? LYS 39 A PRO 40 A ? PRO 40 A 12 -0.05 13 LYS 39 A . ? LYS 39 A PRO 40 A ? PRO 40 A 13 -0.09 14 LYS 39 A . ? LYS 39 A PRO 40 A ? PRO 40 A 14 -0.11 15 LYS 39 A . ? LYS 39 A PRO 40 A ? PRO 40 A 15 -0.27 16 LYS 39 A . ? LYS 39 A PRO 40 A ? PRO 40 A 16 0.03 17 LYS 39 A . ? LYS 39 A PRO 40 A ? PRO 40 A 17 -0.10 18 LYS 39 A . ? LYS 39 A PRO 40 A ? PRO 40 A 18 -0.03 19 LYS 39 A . ? LYS 39 A PRO 40 A ? PRO 40 A 19 -0.12 20 LYS 39 A . ? LYS 39 A PRO 40 A ? PRO 40 A 20 -0.07 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 7 ? GLY A 11 ? GLY A 7 GLY A 11 A 2 ASP A 34 ? PHE A 36 ? ASP A 34 PHE A 36 A 3 ALA A 45 ? THR A 48 ? ALA A 45 THR A 48 A 4 ASP A 62 ? ILE A 65 ? ASP A 62 ILE A 65 A 5 ILE A 68 ? SER A 73 ? ILE A 68 SER A 73 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASP A 34 ? N ASP A 34 O THR A 48 ? O THR A 48 A 2 3 O VAL A 47 ? O VAL A 47 N VAL A 8 ? N VAL A 8 A 3 4 N PHE A 9 ? N PHE A 9 O SER A 73 ? O SER A 73 A 4 5 O VAL A 70 ? O VAL A 70 N LEU A 63 ? N LEU A 63 # _database_PDB_matrix.entry_id 1WF0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1WF0 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 PHE 9 9 9 PHE PHE A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 CYS 13 13 13 CYS CYS A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 MET 17 17 17 MET MET A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 PHE 26 26 26 PHE PHE A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 GLN 28 28 28 GLN GLN A . n A 1 29 TYR 29 29 29 TYR TYR A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 MET 33 33 33 MET MET A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 PHE 36 36 36 PHE PHE A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 PHE 41 41 41 PHE PHE A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 PHE 44 44 44 PHE PHE A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 THR 48 48 48 THR THR A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 GLN 53 53 53 GLN GLN A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 GLN 56 56 56 GLN GLN A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 CYS 59 59 59 CYS CYS A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 GLU 61 61 61 GLU GLU A . n A 1 62 ASP 62 62 62 ASP ASP A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 ILE 65 65 65 ILE ILE A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 VAL 70 70 70 VAL VAL A . n A 1 71 HIS 71 71 71 HIS HIS A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 SER 73 73 73 SER SER A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 LYS 78 78 78 LYS LYS A . n A 1 79 HIS 79 79 79 HIS HIS A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 ASN 82 82 82 ASN ASN A . n A 1 83 SER 83 83 83 SER SER A . n A 1 84 GLY 84 84 84 GLY GLY A . n A 1 85 PRO 85 85 85 PRO PRO A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 SER 87 87 87 SER SER A . n A 1 88 GLY 88 88 88 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-11-25 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 650 ;HELIX AUTHOR DETERMINATION METHOD: AUTHOR DETERMINED ; 700 ;SHEET AUTHOR DETERMINATION METHOD: AUTHOR DETERMINED ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 3 ? ? -150.85 88.81 2 1 VAL A 32 ? ? -65.83 93.23 3 1 CYS A 59 ? ? -57.65 107.70 4 1 HIS A 79 ? ? -176.17 148.28 5 2 MET A 17 ? ? -48.14 165.61 6 2 ALA A 43 ? ? 35.82 37.61 7 2 SER A 81 ? ? 72.08 143.97 8 2 SER A 86 ? ? -123.82 -60.50 9 3 MET A 17 ? ? -54.08 170.61 10 3 VAL A 32 ? ? -63.40 96.49 11 3 ALA A 43 ? ? 36.23 37.16 12 3 SER A 81 ? ? 76.10 95.05 13 4 SER A 2 ? ? -118.50 79.63 14 4 SER A 6 ? ? -95.71 42.11 15 4 SER A 83 ? ? 68.46 135.78 16 5 SER A 5 ? ? -36.11 -79.81 17 5 SER A 6 ? ? -165.35 81.28 18 5 CYS A 13 ? ? -112.43 -168.50 19 5 VAL A 32 ? ? -66.01 95.82 20 5 ALA A 43 ? ? 42.92 29.13 21 5 HIS A 79 ? ? -161.85 35.06 22 5 ASN A 80 ? ? -52.70 95.30 23 5 PRO A 85 ? ? -69.72 0.37 24 5 SER A 86 ? ? 66.62 147.81 25 5 SER A 87 ? ? 60.78 88.29 26 6 SER A 3 ? ? -179.30 116.99 27 6 SER A 6 ? ? -93.78 33.89 28 6 ASN A 82 ? ? 174.46 -60.93 29 7 SER A 3 ? ? -167.46 89.22 30 7 SER A 5 ? ? -171.05 93.32 31 7 SER A 6 ? ? -104.58 58.64 32 7 SER A 81 ? ? -172.45 92.21 33 7 ASN A 82 ? ? 56.43 83.45 34 8 SER A 6 ? ? -96.48 42.29 35 8 MET A 17 ? ? -39.05 152.38 36 8 PRO A 85 ? ? -69.71 0.62 37 8 SER A 87 ? ? -143.56 -68.68 38 9 SER A 2 ? ? 62.00 95.28 39 9 MET A 17 ? ? -56.99 107.41 40 9 VAL A 32 ? ? -64.07 96.52 41 9 ALA A 43 ? ? 37.13 35.49 42 9 SER A 87 ? ? 178.33 -46.34 43 10 SER A 2 ? ? -106.81 65.16 44 10 SER A 5 ? ? 62.84 83.86 45 10 MET A 17 ? ? -42.06 150.41 46 10 VAL A 32 ? ? -62.50 99.58 47 10 LYS A 66 ? ? 81.67 7.46 48 10 ASN A 80 ? ? -99.76 44.42 49 11 SER A 6 ? ? -109.83 45.28 50 11 ARG A 12 ? ? 37.94 46.38 51 11 VAL A 32 ? ? -66.54 98.04 52 11 ALA A 43 ? ? 34.63 40.95 53 11 HIS A 79 ? ? -173.75 92.86 54 11 ASN A 82 ? ? -178.49 -53.03 55 11 SER A 83 ? ? 63.46 151.87 56 12 SER A 2 ? ? -168.06 56.86 57 12 SER A 3 ? ? 51.78 95.76 58 12 ASP A 31 ? ? -118.85 73.63 59 12 VAL A 32 ? ? -62.60 96.69 60 12 ALA A 43 ? ? 35.42 37.11 61 12 HIS A 79 ? ? -160.33 -44.17 62 12 ASN A 80 ? ? 35.85 88.60 63 12 SER A 86 ? ? -139.56 -46.00 64 12 SER A 87 ? ? -57.48 97.58 65 13 SER A 6 ? ? 34.43 90.56 66 13 VAL A 10 ? ? -112.75 73.11 67 13 HIS A 79 ? ? -148.27 -49.07 68 13 SER A 81 ? ? -171.99 139.85 69 13 ASN A 82 ? ? 62.91 81.57 70 13 SER A 83 ? ? -170.79 -54.74 71 14 SER A 6 ? ? -146.77 40.69 72 14 VAL A 10 ? ? -115.20 77.81 73 14 CYS A 13 ? ? -79.12 -167.26 74 14 ASP A 16 ? ? -147.28 -56.85 75 14 MET A 17 ? ? -37.67 153.49 76 14 GLU A 19 ? ? -38.48 -33.71 77 14 ALA A 43 ? ? 46.51 29.45 78 14 ASN A 82 ? ? -172.16 -53.91 79 14 SER A 86 ? ? -166.65 89.22 80 15 SER A 5 ? ? -143.30 -43.64 81 15 SER A 6 ? ? 73.36 42.32 82 15 MET A 17 ? ? -47.55 153.27 83 15 LYS A 66 ? ? 76.77 -3.54 84 15 SER A 81 ? ? 59.07 152.33 85 15 PRO A 85 ? ? -69.85 99.11 86 15 SER A 86 ? ? -93.23 49.45 87 16 SER A 2 ? ? -163.77 113.79 88 16 GLU A 19 ? ? -38.02 -33.14 89 16 SER A 87 ? ? -35.33 143.11 90 17 SER A 2 ? ? 173.28 158.67 91 17 SER A 3 ? ? -164.01 43.37 92 17 ARG A 12 ? ? 53.24 19.83 93 17 GLU A 19 ? ? -36.65 -39.60 94 17 ASP A 31 ? ? -66.64 81.64 95 17 VAL A 32 ? ? -64.94 94.25 96 17 ALA A 43 ? ? 37.33 31.17 97 17 HIS A 79 ? ? 62.67 139.60 98 17 SER A 81 ? ? -164.82 110.89 99 17 PRO A 85 ? ? -69.80 93.15 100 17 SER A 87 ? ? -156.19 -48.41 101 18 SER A 3 ? ? 63.41 129.61 102 18 SER A 6 ? ? -95.32 56.31 103 18 MET A 17 ? ? -44.97 150.99 104 18 GLU A 19 ? ? -39.30 -29.61 105 18 HIS A 79 ? ? -64.58 -71.62 106 18 ASN A 80 ? ? -154.91 -63.44 107 18 SER A 83 ? ? -173.80 142.21 108 18 SER A 86 ? ? 61.35 162.10 109 19 SER A 2 ? ? 175.94 144.56 110 19 SER A 6 ? ? -102.25 46.38 111 19 MET A 17 ? ? -45.70 157.44 112 19 ALA A 43 ? ? 37.00 38.64 113 19 ASN A 80 ? ? -165.83 111.99 114 19 SER A 86 ? ? -174.85 41.46 115 20 SER A 2 ? ? -134.99 -48.38 116 20 SER A 3 ? ? -126.13 -56.52 117 20 GLU A 19 ? ? -35.49 -36.81 118 20 ALA A 43 ? ? 39.87 36.14 119 20 ASN A 80 ? ? 55.36 78.51 120 20 ASN A 82 ? ? 61.54 122.40 #