HEADER PLANT PROTEIN 26-MAY-04 1WFJ TITLE C2 DOMAIN-CONTAINING PROTEIN FROM PUTATIVE ELICITOR-RESPONSIVE GENE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE ELICITOR-RESPONSIVE GENE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C2 DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: RIKEN CDNA RAFL05-11-F09; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P031104-14; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS C2 DOMAIN, ELICITOR-RESPONSIVE GENE, RIKEN STRUCTURAL KEYWDS 2 GENOMICS/PROTEOMICS INITIATIVE, RSGI, STRUCTURAL GENOMICS, PLANT KEYWDS 3 PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 2 INITIATIVE (RSGI) REVDAT 3 02-MAR-22 1WFJ 1 REMARK SEQADV REVDAT 2 24-FEB-09 1WFJ 1 VERSN REVDAT 1 26-NOV-04 1WFJ 0 JRNL AUTH T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA JRNL TITL C2 DOMAIN-CONTAINING PROTEIN FROM PUTATIVE JRNL TITL 2 ELICITOR-RESPONSIVE GENE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, CYANA 1.0.7 REMARK 3 AUTHORS : VARIAN (VNMR), GUENTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WFJ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-JUN-04. REMARK 100 THE DEPOSITION ID IS D_1000023522. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.19MM 13C/15N-LABELED PROTEIN; REMARK 210 20MMNAPI, 100MM NACL, 1MM D-DTT, REMARK 210 0.02% NAN3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20020425, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.8992, CYANA 1.0.7 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H LEU A 73 O ILE A 94 1.36 REMARK 500 H CYS A 39 O GLN A 42 1.49 REMARK 500 H ILE A 105 O LEU A 126 1.51 REMARK 500 H TYR A 110 O ILE A 122 1.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 5 156.36 -40.79 REMARK 500 1 PRO A 8 -165.99 -75.00 REMARK 500 1 HIS A 9 125.09 -171.79 REMARK 500 1 VAL A 17 -87.22 -67.93 REMARK 500 1 LEU A 22 -169.04 -70.32 REMARK 500 1 ASP A 24 61.37 -117.78 REMARK 500 1 ARG A 40 88.28 60.97 REMARK 500 1 THR A 41 33.85 34.04 REMARK 500 1 ASN A 47 158.26 -48.51 REMARK 500 1 ALA A 49 84.16 -61.35 REMARK 500 1 TRP A 58 -45.85 -157.13 REMARK 500 1 SER A 67 67.00 -165.94 REMARK 500 1 GLU A 68 161.60 58.49 REMARK 500 1 PHE A 78 -147.25 -145.83 REMARK 500 1 VAL A 82 -162.88 -70.08 REMARK 500 1 THR A 84 -37.84 -39.80 REMARK 500 1 GLU A 85 77.18 -107.44 REMARK 500 1 ASP A 86 -68.54 -164.67 REMARK 500 1 ASP A 87 113.19 -160.48 REMARK 500 1 ASP A 115 -22.13 83.48 REMARK 500 1 GLU A 116 -20.54 155.33 REMARK 500 1 SER A 131 89.29 -59.65 REMARK 500 1 SER A 134 -56.59 -125.32 REMARK 500 2 SER A 5 -60.02 -102.48 REMARK 500 2 HIS A 9 118.32 -167.42 REMARK 500 2 VAL A 17 -88.91 -60.38 REMARK 500 2 ALA A 25 111.12 -170.85 REMARK 500 2 ASP A 26 88.62 -65.02 REMARK 500 2 LEU A 28 71.90 75.83 REMARK 500 2 ARG A 40 -84.98 66.46 REMARK 500 2 ASN A 47 159.20 -47.95 REMARK 500 2 ALA A 49 78.52 -62.04 REMARK 500 2 THR A 55 76.73 -150.65 REMARK 500 2 ASN A 59 30.40 39.31 REMARK 500 2 SER A 67 -67.49 -144.33 REMARK 500 2 THR A 70 92.24 -69.27 REMARK 500 2 GLU A 72 143.97 -174.69 REMARK 500 2 THR A 84 -36.44 -35.25 REMARK 500 2 GLU A 85 57.08 -97.52 REMARK 500 2 ASP A 86 -65.77 -142.20 REMARK 500 2 ASP A 87 119.32 175.56 REMARK 500 2 SER A 104 134.93 -172.40 REMARK 500 2 ASP A 115 -27.54 89.16 REMARK 500 2 GLU A 116 -21.83 158.63 REMARK 500 2 SER A 131 86.10 -65.42 REMARK 500 3 SER A 5 141.33 -175.61 REMARK 500 3 PRO A 8 -164.89 -75.02 REMARK 500 3 HIS A 9 140.66 179.07 REMARK 500 3 VAL A 17 -87.00 -60.17 REMARK 500 3 ALA A 19 116.95 -160.09 REMARK 500 REMARK 500 THIS ENTRY HAS 440 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: ATR001008092.1 RELATED DB: TARGETDB DBREF 1WFJ A 8 130 UNP Q9C8S6 Y1322_ARATH 2 124 SEQADV 1WFJ GLY A 1 UNP Q9C8S6 CLONING ARTIFACT SEQADV 1WFJ SER A 2 UNP Q9C8S6 CLONING ARTIFACT SEQADV 1WFJ SER A 3 UNP Q9C8S6 CLONING ARTIFACT SEQADV 1WFJ GLY A 4 UNP Q9C8S6 CLONING ARTIFACT SEQADV 1WFJ SER A 5 UNP Q9C8S6 CLONING ARTIFACT SEQADV 1WFJ SER A 6 UNP Q9C8S6 CLONING ARTIFACT SEQADV 1WFJ GLY A 7 UNP Q9C8S6 CLONING ARTIFACT SEQADV 1WFJ SER A 131 UNP Q9C8S6 CLONING ARTIFACT SEQADV 1WFJ GLY A 132 UNP Q9C8S6 CLONING ARTIFACT SEQADV 1WFJ PRO A 133 UNP Q9C8S6 CLONING ARTIFACT SEQADV 1WFJ SER A 134 UNP Q9C8S6 CLONING ARTIFACT SEQADV 1WFJ SER A 135 UNP Q9C8S6 CLONING ARTIFACT SEQADV 1WFJ GLY A 136 UNP Q9C8S6 CLONING ARTIFACT SEQRES 1 A 136 GLY SER SER GLY SER SER GLY PRO HIS GLY THR LEU GLU SEQRES 2 A 136 VAL VAL LEU VAL SER ALA LYS GLY LEU GLU ASP ALA ASP SEQRES 3 A 136 PHE LEU ASN ASN MET ASP PRO TYR VAL GLN LEU THR CYS SEQRES 4 A 136 ARG THR GLN ASP GLN LYS SER ASN VAL ALA GLU GLY MET SEQRES 5 A 136 GLY THR THR PRO GLU TRP ASN GLU THR PHE ILE PHE THR SEQRES 6 A 136 VAL SER GLU GLY THR THR GLU LEU LYS ALA LYS ILE PHE SEQRES 7 A 136 ASP LYS ASP VAL GLY THR GLU ASP ASP ALA VAL GLY GLU SEQRES 8 A 136 ALA THR ILE PRO LEU GLU PRO VAL PHE VAL GLU GLY SER SEQRES 9 A 136 ILE PRO PRO THR ALA TYR ASN VAL VAL LYS ASP GLU GLU SEQRES 10 A 136 TYR LYS GLY GLU ILE TRP VAL ALA LEU SER PHE LYS PRO SEQRES 11 A 136 SER GLY PRO SER SER GLY HELIX 1 1 LEU A 96 GLY A 103 1 8 SHEET 1 A 8 ASP A 43 LYS A 45 0 SHEET 2 A 8 VAL A 35 THR A 38 -1 N LEU A 37 O GLN A 44 SHEET 3 A 8 GLU A 72 ILE A 77 -1 O LYS A 76 N GLN A 36 SHEET 4 A 8 GLY A 90 PRO A 95 -1 O ILE A 94 N LEU A 73 SHEET 5 A 8 SER A 104 LYS A 114 -1 O VAL A 113 N GLU A 91 SHEET 6 A 8 GLU A 117 PRO A 130 -1 O LEU A 126 N ILE A 105 SHEET 7 A 8 HIS A 9 GLY A 21 -1 N SER A 18 O TRP A 123 SHEET 8 A 8 GLU A 57 SER A 67 -1 O PHE A 64 N LEU A 12 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1