HEADER PROTEIN BINDING 26-MAY-04 1WFT TITLE SOLUTION STRUCTURE OF C-TERMINAL FIBRONECTIN TYPE III DOMAIN OF MOUSE TITLE 2 1700129L13RIK PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1700129L13RIK PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: FN3 DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: RIKEN CDNA 1700129L13; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P031015-19; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS FN3 DOMAIN, SIMILAR TO HOST CELL FACTOR 2, STRUCTURAL GENOMICS, RIKEN KEYWDS 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 02-MAR-22 1WFT 1 REMARK SEQADV REVDAT 2 24-FEB-09 1WFT 1 VERSN REVDAT 1 26-NOV-04 1WFT 0 JRNL AUTH N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF C-TERMINAL FIBRONECTIN TYPE III DOMAIN JRNL TITL 2 OF MOUSE 1700129L13RIK PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 2.6, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUENTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WFT COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-JUN-04. REMARK 100 THE DEPOSITION ID IS D_1000023532. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 220MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM FN3 DOMAIN U-15N, 13C; 20MM REMARK 210 D-TRIS HCL; 200MM NACL; 2MM D- REMARK 210 DTT; 0.02% NAN3; 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.8994, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 5 -71.65 -79.08 REMARK 500 1 SER A 6 110.62 -37.36 REMARK 500 1 GLU A 39 156.51 -45.74 REMARK 500 1 PRO A 55 87.64 -69.77 REMARK 500 1 SER A 56 -60.08 -126.77 REMARK 500 1 THR A 69 38.55 -93.04 REMARK 500 1 SER A 70 126.95 -171.73 REMARK 500 1 TYR A 85 34.09 -97.66 REMARK 500 1 PRO A 89 95.77 -69.79 REMARK 500 1 GLU A 100 -65.03 -132.89 REMARK 500 2 SER A 6 82.85 -68.74 REMARK 500 2 PRO A 33 3.08 -69.77 REMARK 500 2 SER A 34 140.14 -34.30 REMARK 500 2 THR A 48 116.89 -160.47 REMARK 500 2 GLN A 57 96.13 -34.62 REMARK 500 2 LEU A 58 135.62 -34.22 REMARK 500 2 SER A 87 -67.21 -92.06 REMARK 500 2 PRO A 89 92.55 -69.68 REMARK 500 2 GLU A 100 -39.27 -35.06 REMARK 500 2 ASN A 115 129.53 -170.99 REMARK 500 3 SER A 3 175.00 -53.00 REMARK 500 3 SER A 5 89.42 -61.23 REMARK 500 3 PRO A 8 -179.74 -69.72 REMARK 500 3 ILE A 37 98.62 -64.76 REMARK 500 3 MET A 51 -62.31 -131.26 REMARK 500 3 GLN A 52 -177.74 -68.99 REMARK 500 3 SER A 56 96.80 -45.18 REMARK 500 3 THR A 69 40.07 -87.74 REMARK 500 3 TYR A 85 42.57 -104.68 REMARK 500 3 PRO A 89 90.51 -69.71 REMARK 500 3 ARG A 94 119.88 -160.24 REMARK 500 4 THR A 31 41.48 -90.46 REMARK 500 4 PRO A 33 86.45 -69.85 REMARK 500 4 MET A 51 101.61 -51.90 REMARK 500 4 ASP A 53 -71.90 -108.19 REMARK 500 4 ASN A 54 158.25 -38.35 REMARK 500 4 LEU A 58 92.41 -43.20 REMARK 500 4 PRO A 89 92.60 -69.74 REMARK 500 5 THR A 31 40.68 -87.58 REMARK 500 5 PRO A 33 2.99 -69.77 REMARK 500 5 ALA A 45 99.44 -67.37 REMARK 500 5 ARG A 47 144.90 -174.19 REMARK 500 5 GLN A 57 101.21 -34.89 REMARK 500 5 LEU A 58 135.07 -38.79 REMARK 500 5 ALA A 81 108.60 -58.28 REMARK 500 5 TYR A 85 30.63 -91.83 REMARK 500 5 PRO A 89 91.98 -69.76 REMARK 500 5 SER A 118 126.65 -35.79 REMARK 500 6 SER A 3 -54.57 -124.03 REMARK 500 6 LEU A 38 -72.29 -38.49 REMARK 500 REMARK 500 THIS ENTRY HAS 228 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMT007015303.1 RELATED DB: TARGETDB DBREF 1WFT A 8 117 UNP Q9D968 HCFC2_MOUSE 127 236 SEQADV 1WFT GLY A 1 UNP Q9D968 CLONING ARTIFACT SEQADV 1WFT SER A 2 UNP Q9D968 CLONING ARTIFACT SEQADV 1WFT SER A 3 UNP Q9D968 CLONING ARTIFACT SEQADV 1WFT GLY A 4 UNP Q9D968 CLONING ARTIFACT SEQADV 1WFT SER A 5 UNP Q9D968 CLONING ARTIFACT SEQADV 1WFT SER A 6 UNP Q9D968 CLONING ARTIFACT SEQADV 1WFT GLY A 7 UNP Q9D968 CLONING ARTIFACT SEQADV 1WFT SER A 118 UNP Q9D968 CLONING ARTIFACT SEQADV 1WFT GLY A 119 UNP Q9D968 CLONING ARTIFACT SEQADV 1WFT PRO A 120 UNP Q9D968 CLONING ARTIFACT SEQADV 1WFT SER A 121 UNP Q9D968 CLONING ARTIFACT SEQADV 1WFT SER A 122 UNP Q9D968 CLONING ARTIFACT SEQADV 1WFT GLY A 123 UNP Q9D968 CLONING ARTIFACT SEQRES 1 A 123 GLY SER SER GLY SER SER GLY PRO GLY ALA PRO SER THR SEQRES 2 A 123 VAL ARG ILE SER LYS ASN VAL ASP GLY ILE HIS LEU SER SEQRES 3 A 123 TRP GLU PRO PRO THR SER PRO SER GLY ASN ILE LEU GLU SEQRES 4 A 123 TYR SER ALA TYR LEU ALA ILE ARG THR ALA GLN MET GLN SEQRES 5 A 123 ASP ASN PRO SER GLN LEU VAL PHE MET ARG ILE TYR CYS SEQRES 6 A 123 GLY LEU LYS THR SER CYS THR VAL THR ALA GLY GLN LEU SEQRES 7 A 123 ALA ASN ALA HIS ILE ASP TYR THR SER ARG PRO ALA ILE SEQRES 8 A 123 VAL PHE ARG ILE SER ALA LYS ASN GLU LYS GLY TYR GLY SEQRES 9 A 123 PRO ALA THR GLN ILE ARG TRP LEU GLN GLY ASN SER LYS SEQRES 10 A 123 SER GLY PRO SER SER GLY HELIX 1 1 ALA A 75 ALA A 79 1 5 SHEET 1 A 3 SER A 12 LYS A 18 0 SHEET 2 A 3 GLY A 22 GLU A 28 -1 O HIS A 24 N SER A 17 SHEET 3 A 3 SER A 70 THR A 74 -1 O VAL A 73 N ILE A 23 SHEET 1 B 4 VAL A 59 GLY A 66 0 SHEET 2 B 4 TYR A 40 ILE A 46 -1 N ALA A 42 O ILE A 63 SHEET 3 B 4 ALA A 90 ALA A 97 -1 O ARG A 94 N TYR A 43 SHEET 4 B 4 THR A 107 LEU A 112 -1 O TRP A 111 N ILE A 91 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1