data_1WGM # _entry.id 1WGM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1WGM pdb_00001wgm 10.2210/pdb1wgm/pdb RCSB RCSB023557 ? ? WWPDB D_1000023557 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsk002000123.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1WGM _pdbx_database_status.recvd_initial_deposition_date 2004-05-28 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Saito, K.' 1 'Koshiba, S.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Yokoyama, S.' 5 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 6 # _citation.id primary _citation.title 'Solution structure of the U-box in human ubiquitin conjugation factor E4A' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Saito, K.' 1 ? primary 'Koshiba, S.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Yokoyama, S.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Ubiquitin conjugation factor E4A' _entity.formula_weight 10922.079 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment U-box _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGLQQQEEETYADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKE KIQRWLAERKQQSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGLQQQEEETYADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKE KIQRWLAERKQQSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsk002000123.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 LEU n 1 9 GLN n 1 10 GLN n 1 11 GLN n 1 12 GLU n 1 13 GLU n 1 14 GLU n 1 15 THR n 1 16 TYR n 1 17 ALA n 1 18 ASP n 1 19 ALA n 1 20 CYS n 1 21 ASP n 1 22 GLU n 1 23 PHE n 1 24 LEU n 1 25 ASP n 1 26 PRO n 1 27 ILE n 1 28 MET n 1 29 SER n 1 30 THR n 1 31 LEU n 1 32 MET n 1 33 CYS n 1 34 ASP n 1 35 PRO n 1 36 VAL n 1 37 VAL n 1 38 LEU n 1 39 PRO n 1 40 SER n 1 41 SER n 1 42 ARG n 1 43 VAL n 1 44 THR n 1 45 VAL n 1 46 ASP n 1 47 ARG n 1 48 SER n 1 49 THR n 1 50 ILE n 1 51 ALA n 1 52 ARG n 1 53 HIS n 1 54 LEU n 1 55 LEU n 1 56 SER n 1 57 ASP n 1 58 GLN n 1 59 THR n 1 60 ASP n 1 61 PRO n 1 62 PHE n 1 63 ASN n 1 64 ARG n 1 65 SER n 1 66 PRO n 1 67 LEU n 1 68 THR n 1 69 MET n 1 70 ASP n 1 71 GLN n 1 72 ILE n 1 73 ARG n 1 74 PRO n 1 75 ASN n 1 76 THR n 1 77 GLU n 1 78 LEU n 1 79 LYS n 1 80 GLU n 1 81 LYS n 1 82 ILE n 1 83 GLN n 1 84 ARG n 1 85 TRP n 1 86 LEU n 1 87 ALA n 1 88 GLU n 1 89 ARG n 1 90 LYS n 1 91 GLN n 1 92 GLN n 1 93 SER n 1 94 GLY n 1 95 PRO n 1 96 SER n 1 97 SER n 1 98 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'Kazusa cDNA ha03786' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P040114-80 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free Protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code UBE4A_HUMAN _struct_ref.pdbx_db_accession Q14139 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LQQQEEETYADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLA ERKQQ ; _struct_ref.pdbx_align_begin 984 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1WGM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 92 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q14139 _struct_ref_seq.db_align_beg 984 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1068 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 92 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1WGM GLY A 1 ? UNP Q14139 ? ? 'cloning artifact' 1 1 1 1WGM SER A 2 ? UNP Q14139 ? ? 'cloning artifact' 2 2 1 1WGM SER A 3 ? UNP Q14139 ? ? 'cloning artifact' 3 3 1 1WGM GLY A 4 ? UNP Q14139 ? ? 'cloning artifact' 4 4 1 1WGM SER A 5 ? UNP Q14139 ? ? 'cloning artifact' 5 5 1 1WGM SER A 6 ? UNP Q14139 ? ? 'cloning artifact' 6 6 1 1WGM GLY A 7 ? UNP Q14139 ? ? 'cloning artifact' 7 7 1 1WGM SER A 93 ? UNP Q14139 ? ? 'cloning artifact' 93 8 1 1WGM GLY A 94 ? UNP Q14139 ? ? 'cloning artifact' 94 9 1 1WGM PRO A 95 ? UNP Q14139 ? ? 'cloning artifact' 95 10 1 1WGM SER A 96 ? UNP Q14139 ? ? 'cloning artifact' 96 11 1 1WGM SER A 97 ? UNP Q14139 ? ? 'cloning artifact' 97 12 1 1WGM GLY A 98 ? UNP Q14139 ? ? 'cloning artifact' 98 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 3D_13C-separated_NOESY 2 1 1 3D_15N-separated_NOESY # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '20mM d-Tris-HCl, pH 7.0, 100mM NaCl, 1mM d-DTT, 0.02% NaN3, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.field_strength 800 # _pdbx_nmr_refine.entry_id 1WGM _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1WGM _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1WGM _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal XwinNMR 2.6 collection Bruker 1 NMRPipe 20020425 processing 'Delaglio, F.' 2 NMRView 5 'data analysis' 'Johnson, B.A.' 3 CNS 1.1 'structure solution' 'Brunger, A.T' 4 CNS 1.1 refinement 'Brunger, A.T' 5 # _exptl.entry_id 1WGM _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1WGM _struct.title 'Solution structure of the U-box in human ubiquitin conjugation factor E4A' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1WGM _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'ubiquitinating enzyme, KIAA0126, structural genomics, RIKEN Structural Genomics/Proteomics Initiative, RSGI, PROTEIN BINDING' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 47 ? LEU A 54 ? ARG A 47 LEU A 54 1 ? 8 HELX_P HELX_P2 2 ASN A 75 ? ARG A 89 ? ASN A 75 ARG A 89 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 44 ? ASP A 46 ? THR A 44 ASP A 46 A 2 PRO A 35 ? VAL A 37 ? PRO A 35 VAL A 37 A 3 ARG A 73 ? PRO A 74 ? ARG A 73 PRO A 74 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 45 ? O VAL A 45 N VAL A 36 ? N VAL A 36 A 2 3 N VAL A 37 ? N VAL A 37 O ARG A 73 ? O ARG A 73 # _database_PDB_matrix.entry_id 1WGM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1WGM _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 GLN 9 9 9 GLN GLN A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 GLN 11 11 11 GLN GLN A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 TYR 16 16 16 TYR TYR A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 CYS 20 20 20 CYS CYS A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 PHE 23 23 23 PHE PHE A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 PRO 26 26 26 PRO PRO A . n A 1 27 ILE 27 27 27 ILE ILE A . n A 1 28 MET 28 28 28 MET MET A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 MET 32 32 32 MET MET A . n A 1 33 CYS 33 33 33 CYS CYS A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 PRO 35 35 35 PRO PRO A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 ARG 47 47 47 ARG ARG A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 HIS 53 53 53 HIS HIS A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 THR 59 59 59 THR THR A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 PHE 62 62 62 PHE PHE A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 PRO 66 66 66 PRO PRO A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 THR 68 68 68 THR THR A . n A 1 69 MET 69 69 69 MET MET A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 GLN 71 71 71 GLN GLN A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 PRO 74 74 74 PRO PRO A . n A 1 75 ASN 75 75 75 ASN ASN A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 LYS 79 79 79 LYS LYS A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 GLN 83 83 83 GLN GLN A . n A 1 84 ARG 84 84 84 ARG ARG A . n A 1 85 TRP 85 85 85 TRP TRP A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 GLN 91 91 91 GLN GLN A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 PRO 95 95 95 PRO PRO A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 SER 97 97 97 SER SER A . n A 1 98 GLY 98 98 98 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-11-28 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 3 ? ? -140.94 -47.36 2 1 GLN A 10 ? ? -106.66 73.89 3 1 GLN A 11 ? ? 59.66 172.15 4 1 GLU A 12 ? ? 60.25 164.21 5 1 GLU A 13 ? ? -136.37 -54.07 6 1 THR A 15 ? ? -167.75 83.30 7 1 ASP A 18 ? ? -149.76 29.22 8 1 SER A 40 ? ? -102.51 -65.88 9 1 LEU A 54 ? ? -96.46 31.19 10 1 GLN A 58 ? ? -66.43 77.47 11 1 GLN A 92 ? ? 60.21 174.86 12 1 PRO A 95 ? ? -51.18 170.46 13 2 SER A 2 ? ? -170.08 -173.10 14 2 SER A 3 ? ? -143.86 -49.89 15 2 LEU A 8 ? ? 58.92 178.72 16 2 GLN A 9 ? ? -162.27 -45.74 17 2 TYR A 16 ? ? 60.58 83.85 18 2 SER A 40 ? ? -108.28 -79.29 19 2 LEU A 54 ? ? -96.79 32.62 20 2 LEU A 55 ? ? -91.01 -64.23 21 2 GLN A 58 ? ? -66.48 77.39 22 2 SER A 96 ? ? 60.31 -170.91 23 3 SER A 6 ? ? -169.59 -72.26 24 3 LEU A 8 ? ? 60.25 86.12 25 3 GLN A 9 ? ? -176.27 136.78 26 3 GLN A 10 ? ? -99.80 36.14 27 3 ASP A 18 ? ? -154.74 30.99 28 3 SER A 40 ? ? -108.18 -79.23 29 3 LEU A 54 ? ? -95.01 30.89 30 3 LYS A 90 ? ? -90.70 51.72 31 3 SER A 96 ? ? -64.56 -176.39 32 3 SER A 97 ? ? 60.68 164.60 33 4 SER A 3 ? ? -165.75 87.78 34 4 LEU A 8 ? ? -98.40 -66.72 35 4 GLN A 10 ? ? -166.26 37.74 36 4 GLU A 13 ? ? -159.97 -57.43 37 4 SER A 40 ? ? -94.02 -61.27 38 4 LEU A 54 ? ? -96.61 30.50 39 4 GLN A 58 ? ? -66.26 77.61 40 4 SER A 93 ? ? 61.07 95.56 41 5 GLN A 9 ? ? -152.49 -46.96 42 5 GLU A 13 ? ? 59.34 167.52 43 5 THR A 15 ? ? 179.34 -36.51 44 5 TYR A 16 ? ? 62.95 73.95 45 5 SER A 40 ? ? -104.18 -71.87 46 5 GLN A 58 ? ? -67.32 75.55 47 5 LYS A 90 ? ? -95.14 38.87 48 5 SER A 93 ? ? -149.30 -47.04 49 5 SER A 96 ? ? -65.03 -177.40 50 6 SER A 2 ? ? -99.93 30.13 51 6 SER A 3 ? ? 59.06 86.02 52 6 GLN A 11 ? ? -97.45 38.84 53 6 GLU A 12 ? ? -166.30 79.12 54 6 GLU A 14 ? ? 60.36 84.92 55 6 ASP A 18 ? ? -95.01 41.67 56 6 CYS A 20 ? ? -59.92 172.34 57 6 ASP A 34 ? ? -117.74 76.14 58 6 PRO A 66 ? ? -59.65 107.46 59 6 PRO A 95 ? ? -52.97 109.12 60 7 SER A 3 ? ? 60.66 170.63 61 7 SER A 5 ? ? -171.92 -67.54 62 7 LEU A 8 ? ? -158.22 -45.31 63 7 GLN A 58 ? ? -68.12 78.65 64 7 LYS A 90 ? ? -94.37 43.13 65 7 SER A 93 ? ? -163.07 -47.83 66 7 PRO A 95 ? ? -67.28 81.77 67 7 SER A 96 ? ? -99.48 34.18 68 7 SER A 97 ? ? -148.52 34.98 69 8 SER A 2 ? ? -161.97 -45.22 70 8 THR A 15 ? ? -115.88 52.62 71 8 ASP A 18 ? ? -95.97 35.13 72 8 SER A 40 ? ? -99.96 -76.70 73 8 LEU A 54 ? ? -94.99 30.67 74 8 GLN A 58 ? ? -66.26 80.32 75 8 GLN A 92 ? ? -108.19 66.32 76 9 GLN A 9 ? ? -173.66 92.74 77 9 GLU A 13 ? ? 62.28 124.21 78 9 TYR A 16 ? ? 60.53 66.97 79 9 SER A 40 ? ? -95.70 -69.35 80 9 LEU A 54 ? ? -95.09 31.02 81 9 GLN A 58 ? ? -68.31 77.69 82 9 GLN A 92 ? ? -59.47 -75.49 83 9 SER A 96 ? ? 59.70 176.78 84 9 SER A 97 ? ? -95.40 -66.44 85 10 SER A 2 ? ? -103.17 74.27 86 10 THR A 15 ? ? -172.29 92.37 87 10 ASP A 18 ? ? -97.72 33.53 88 10 SER A 40 ? ? -100.26 -67.99 89 10 LEU A 54 ? ? -94.84 38.31 90 10 GLN A 58 ? ? -67.21 76.61 91 10 PRO A 66 ? ? -52.40 109.22 92 10 LYS A 90 ? ? -95.07 40.34 93 10 GLN A 91 ? ? -141.91 30.19 94 11 SER A 2 ? ? 68.92 -66.31 95 11 SER A 3 ? ? 63.25 90.53 96 11 GLN A 10 ? ? -67.09 98.05 97 11 GLN A 11 ? ? 63.52 140.48 98 11 GLU A 13 ? ? -160.08 91.71 99 11 ASP A 18 ? ? -98.37 30.78 100 11 ILE A 27 ? ? -103.86 -60.22 101 11 SER A 40 ? ? -104.33 -71.32 102 11 GLN A 58 ? ? -68.96 79.39 103 11 PRO A 66 ? ? -58.70 106.10 104 11 ASN A 75 ? ? -69.42 88.03 105 11 SER A 93 ? ? -139.15 -47.41 106 11 SER A 96 ? ? -144.43 35.48 107 12 GLU A 13 ? ? 59.77 74.14 108 12 THR A 15 ? ? -158.13 63.98 109 12 ASP A 34 ? ? -119.16 75.18 110 12 SER A 40 ? ? -105.65 -71.81 111 12 LEU A 54 ? ? -96.13 38.35 112 12 LEU A 55 ? ? -97.62 -60.21 113 12 PRO A 66 ? ? -60.43 96.44 114 12 SER A 93 ? ? -150.66 -47.32 115 12 SER A 97 ? ? -131.73 -70.26 116 13 SER A 2 ? ? -99.62 47.75 117 13 SER A 3 ? ? -98.32 33.86 118 13 SER A 6 ? ? 60.42 104.39 119 13 GLN A 11 ? ? 61.66 114.46 120 13 GLU A 13 ? ? 59.69 166.18 121 13 THR A 15 ? ? -160.96 -44.59 122 13 TYR A 16 ? ? 61.31 88.05 123 13 SER A 40 ? ? -93.65 -67.16 124 13 LEU A 54 ? ? -96.28 32.99 125 13 PRO A 66 ? ? -57.06 107.21 126 13 LYS A 90 ? ? -95.94 35.65 127 13 SER A 96 ? ? -176.44 100.27 128 14 SER A 6 ? ? -159.61 30.17 129 14 LEU A 8 ? ? 59.75 173.31 130 14 GLN A 10 ? ? -173.55 -172.31 131 14 GLU A 13 ? ? -155.21 31.56 132 14 GLU A 14 ? ? -170.72 80.62 133 14 TYR A 16 ? ? -62.04 90.14 134 14 SER A 40 ? ? -103.01 -69.42 135 14 LEU A 54 ? ? -95.65 35.04 136 14 GLN A 58 ? ? -66.90 75.98 137 14 SER A 93 ? ? -162.09 -48.36 138 14 PRO A 95 ? ? -55.42 87.33 139 14 SER A 96 ? ? 57.38 90.99 140 15 SER A 5 ? ? -105.92 -60.67 141 15 LEU A 8 ? ? -124.19 -57.22 142 15 GLN A 9 ? ? 60.15 176.17 143 15 SER A 40 ? ? -100.76 -73.07 144 15 SER A 96 ? ? -175.13 -50.10 145 16 ASP A 18 ? ? -151.57 26.33 146 16 SER A 40 ? ? -101.03 -70.03 147 16 LEU A 54 ? ? -96.46 30.32 148 16 GLN A 58 ? ? -67.21 78.68 149 16 PRO A 66 ? ? -59.26 106.52 150 16 SER A 96 ? ? -83.32 -74.11 151 17 LEU A 8 ? ? 60.60 99.42 152 17 GLN A 9 ? ? -66.72 -72.28 153 17 GLN A 11 ? ? 60.63 -171.79 154 17 TYR A 16 ? ? 61.48 71.94 155 17 ASP A 18 ? ? -145.42 30.50 156 17 SER A 40 ? ? -104.31 -75.67 157 17 LEU A 54 ? ? -96.17 37.97 158 17 LEU A 55 ? ? -102.14 -69.25 159 17 GLN A 58 ? ? -68.36 78.38 160 17 PRO A 66 ? ? -57.70 102.51 161 17 ASN A 75 ? ? -69.64 88.91 162 17 SER A 96 ? ? -172.31 -54.77 163 17 SER A 97 ? ? -140.21 -68.30 164 18 SER A 2 ? ? -157.42 -46.83 165 18 SER A 6 ? ? 60.67 175.66 166 18 GLN A 10 ? ? -173.62 142.08 167 18 GLU A 13 ? ? 60.25 97.53 168 18 THR A 15 ? ? -168.19 79.25 169 18 SER A 40 ? ? -104.27 -76.46 170 18 LEU A 54 ? ? -96.48 31.73 171 18 PRO A 66 ? ? -51.67 109.88 172 18 ASN A 75 ? ? -69.96 91.51 173 18 LYS A 90 ? ? -94.90 45.40 174 18 SER A 96 ? ? -177.27 117.40 175 18 SER A 97 ? ? -176.80 -58.07 176 19 LEU A 8 ? ? -141.35 -65.48 177 19 GLN A 11 ? ? 60.38 -178.92 178 19 GLU A 14 ? ? 60.74 158.94 179 19 TYR A 16 ? ? 62.36 91.10 180 19 GLN A 58 ? ? -67.59 81.52 181 19 PRO A 66 ? ? -57.36 103.05 182 19 PRO A 95 ? ? -68.92 91.93 183 20 SER A 2 ? ? -133.38 -51.93 184 20 GLN A 9 ? ? -145.89 -51.41 185 20 GLU A 12 ? ? -161.61 108.74 186 20 THR A 15 ? ? -162.36 37.86 187 20 TYR A 16 ? ? -69.19 83.22 188 20 ASP A 18 ? ? -96.72 31.55 189 20 LEU A 54 ? ? -96.38 30.70 190 20 LEU A 55 ? ? -87.41 -72.05 191 20 GLN A 58 ? ? -66.86 76.21 192 20 PRO A 66 ? ? -59.16 105.21 #