data_1WHK # _entry.id 1WHK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1WHK pdb_00001whk 10.2210/pdb1whk/pdb RCSB RCSB023587 ? ? WWPDB D_1000023587 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id mmt007112333.2 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1WHK _pdbx_database_status.recvd_initial_deposition_date 2004-05-28 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Saito, K.' 1 'Tochio, N.' 2 'Koshiba, S.' 3 'Inoue, M.' 4 'Kigawa, T.' 5 'Yokoyama, S.' 6 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 7 # _citation.id primary _citation.title 'Solution structure of the 3rd CAP-Gly domain in mouse 1700024K14Rik hypothetical protein' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Saito, K.' 1 ? primary 'Tochio, N.' 2 ? primary 'Koshiba, S.' 3 ? primary 'Inoue, M.' 4 ? primary 'Kigawa, T.' 5 ? primary 'Yokoyama, S.' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'RIKEN cDNA 1700024K14' _entity.formula_weight 9523.619 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'CAP-Gly domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 1700024K14Rik # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGEGTVKLHEGSQVLLTSSNEMATVRYVGPTDFASGIWLGLELRSAKGKNDGAVGDKRYFTCKPNYGVLVRPSRV TYRGISGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGEGTVKLHEGSQVLLTSSNEMATVRYVGPTDFASGIWLGLELRSAKGKNDGAVGDKRYFTCKPNYGVLVRPSRV TYRGISGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier mmt007112333.2 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 GLU n 1 9 GLY n 1 10 THR n 1 11 VAL n 1 12 LYS n 1 13 LEU n 1 14 HIS n 1 15 GLU n 1 16 GLY n 1 17 SER n 1 18 GLN n 1 19 VAL n 1 20 LEU n 1 21 LEU n 1 22 THR n 1 23 SER n 1 24 SER n 1 25 ASN n 1 26 GLU n 1 27 MET n 1 28 ALA n 1 29 THR n 1 30 VAL n 1 31 ARG n 1 32 TYR n 1 33 VAL n 1 34 GLY n 1 35 PRO n 1 36 THR n 1 37 ASP n 1 38 PHE n 1 39 ALA n 1 40 SER n 1 41 GLY n 1 42 ILE n 1 43 TRP n 1 44 LEU n 1 45 GLY n 1 46 LEU n 1 47 GLU n 1 48 LEU n 1 49 ARG n 1 50 SER n 1 51 ALA n 1 52 LYS n 1 53 GLY n 1 54 LYS n 1 55 ASN n 1 56 ASP n 1 57 GLY n 1 58 ALA n 1 59 VAL n 1 60 GLY n 1 61 ASP n 1 62 LYS n 1 63 ARG n 1 64 TYR n 1 65 PHE n 1 66 THR n 1 67 CYS n 1 68 LYS n 1 69 PRO n 1 70 ASN n 1 71 TYR n 1 72 GLY n 1 73 VAL n 1 74 LEU n 1 75 VAL n 1 76 ARG n 1 77 PRO n 1 78 SER n 1 79 ARG n 1 80 VAL n 1 81 THR n 1 82 TYR n 1 83 ARG n 1 84 GLY n 1 85 ILE n 1 86 SER n 1 87 GLY n 1 88 PRO n 1 89 SER n 1 90 SER n 1 91 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene 'RIKEN cDNA 5830409B12' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P040223-88 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RSNL2_MOUSE _struct_ref.pdbx_db_accession Q8CI96 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code EGTVKLHEGSQVLLTSSNEMATVRYVGPTDFASGIWLGLELRSAKGKNDGAVGDKRYFTCKPNYGVLVRPSRVTYRGI _struct_ref.pdbx_align_begin 617 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1WHK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 85 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8CI96 _struct_ref_seq.db_align_beg 617 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 694 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 85 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1WHK GLY A 1 ? UNP Q8CI96 ? ? 'cloning artifact' 1 1 1 1WHK SER A 2 ? UNP Q8CI96 ? ? 'cloning artifact' 2 2 1 1WHK SER A 3 ? UNP Q8CI96 ? ? 'cloning artifact' 3 3 1 1WHK GLY A 4 ? UNP Q8CI96 ? ? 'cloning artifact' 4 4 1 1WHK SER A 5 ? UNP Q8CI96 ? ? 'cloning artifact' 5 5 1 1WHK SER A 6 ? UNP Q8CI96 ? ? 'cloning artifact' 6 6 1 1WHK GLY A 7 ? UNP Q8CI96 ? ? 'cloning artifact' 7 7 1 1WHK SER A 86 ? UNP Q8CI96 ? ? 'cloning artifact' 86 8 1 1WHK GLY A 87 ? UNP Q8CI96 ? ? 'cloning artifact' 87 9 1 1WHK PRO A 88 ? UNP Q8CI96 ? ? 'cloning artifact' 88 10 1 1WHK SER A 89 ? UNP Q8CI96 ? ? 'cloning artifact' 89 11 1 1WHK SER A 90 ? UNP Q8CI96 ? ? 'cloning artifact' 90 12 1 1WHK GLY A 91 ? UNP Q8CI96 ? ? 'cloning artifact' 91 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 3D_13C-separated_NOESY 2 1 1 3D_15N-separated_NOESY # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1mM protein, 20mM d-Tris-HCl, pH 7.0, 100mM NaCl, 1mM d-DTT, 0.02% NaN3, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.field_strength 700 # _pdbx_nmr_refine.entry_id 1WHK _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1WHK _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1WHK _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal XwinNMR 3.5 collection Bruker 1 NMRPipe 20020425 processing 'Delaglio, F.' 2 NMRView 5 'data analysis' 'Johnson B.A.' 3 CNS 1.1 'structure solution' 'Brunger, A.T.' 4 CNS 1.1 refinement 'Brunger, A.T.' 5 # _exptl.entry_id 1WHK _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1WHK _struct.title 'Solution structure of the 3rd CAP-Gly domain in mouse 1700024K14Rik hypothetical protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1WHK _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text 'structural genomics, RIKEN Structural Genomics/Proteomics Initiative, RSGI, UNKNOWN FUNCTION' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id ARG _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 76 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id SER _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 78 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ARG _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 76 _struct_conf.end_auth_comp_id SER _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 78 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 34 ? PRO A 35 ? GLY A 34 PRO A 35 A 2 ILE A 42 ? GLU A 47 ? ILE A 42 GLU A 47 A 3 LEU A 74 ? VAL A 75 ? LEU A 74 VAL A 75 B 1 GLY A 34 ? PRO A 35 ? GLY A 34 PRO A 35 B 2 ILE A 42 ? GLU A 47 ? ILE A 42 GLU A 47 B 3 MET A 27 ? VAL A 30 ? MET A 27 VAL A 30 B 4 GLN A 18 ? LEU A 21 ? GLN A 18 LEU A 21 B 5 VAL A 80 ? THR A 81 ? VAL A 80 THR A 81 C 1 ALA A 58 ? VAL A 59 ? ALA A 58 VAL A 59 C 2 LYS A 62 ? ARG A 63 ? LYS A 62 ARG A 63 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 34 ? N GLY A 34 O TRP A 43 ? O TRP A 43 A 2 3 N LEU A 44 ? N LEU A 44 O VAL A 75 ? O VAL A 75 B 1 2 N GLY A 34 ? N GLY A 34 O TRP A 43 ? O TRP A 43 B 2 3 O GLU A 47 ? O GLU A 47 N THR A 29 ? N THR A 29 B 3 4 O ALA A 28 ? O ALA A 28 N VAL A 19 ? N VAL A 19 B 4 5 N LEU A 20 ? N LEU A 20 O THR A 81 ? O THR A 81 C 1 2 N VAL A 59 ? N VAL A 59 O LYS A 62 ? O LYS A 62 # _database_PDB_matrix.entry_id 1WHK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1WHK _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 HIS 14 14 14 HIS HIS A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 MET 27 27 27 MET MET A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 THR 29 29 29 THR THR A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 ARG 31 31 31 ARG ARG A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 PRO 35 35 35 PRO PRO A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 PHE 38 38 38 PHE PHE A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 TRP 43 43 43 TRP TRP A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 ARG 49 49 49 ARG ARG A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 LYS 62 62 62 LYS LYS A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 TYR 64 64 64 TYR TYR A . n A 1 65 PHE 65 65 65 PHE PHE A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 CYS 67 67 67 CYS CYS A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 PRO 69 69 69 PRO PRO A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 TYR 71 71 71 TYR TYR A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 TYR 82 82 82 TYR TYR A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 GLY 84 84 84 GLY GLY A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 PRO 88 88 88 PRO PRO A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 GLY 91 91 91 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-11-28 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 2 ? ? -160.03 112.10 2 1 SER A 5 ? ? -126.55 -62.05 3 1 GLU A 8 ? ? 56.11 176.50 4 1 THR A 10 ? ? -99.00 35.08 5 1 LYS A 12 ? ? -119.05 74.57 6 1 HIS A 14 ? ? -126.21 -54.13 7 1 THR A 22 ? ? -98.76 33.29 8 1 SER A 23 ? ? -147.49 -47.53 9 1 ARG A 49 ? ? -98.36 35.58 10 1 LYS A 52 ? ? -143.65 35.96 11 1 LYS A 54 ? ? -142.02 30.75 12 1 TYR A 82 ? ? -171.18 142.45 13 1 SER A 86 ? ? -105.75 -66.00 14 2 SER A 3 ? ? -148.91 -47.03 15 2 SER A 6 ? ? -173.32 132.85 16 2 LEU A 13 ? ? 60.02 -178.60 17 2 GLU A 15 ? ? -63.73 99.41 18 2 SER A 23 ? ? -104.63 48.53 19 2 SER A 24 ? ? -179.29 -36.72 20 2 PRO A 35 ? ? -52.10 -178.97 21 2 LYS A 52 ? ? -151.01 33.92 22 2 TYR A 64 ? ? -132.20 -46.71 23 2 ASN A 70 ? ? 61.61 60.56 24 2 TYR A 71 ? ? -130.74 -57.48 25 2 SER A 86 ? ? -155.35 31.10 26 3 SER A 3 ? ? -68.95 92.36 27 3 SER A 5 ? ? -99.23 36.68 28 3 SER A 6 ? ? -63.07 -171.45 29 3 VAL A 11 ? ? 58.83 84.25 30 3 HIS A 14 ? ? -121.43 -57.68 31 3 ARG A 49 ? ? -99.02 31.08 32 3 ALA A 51 ? ? -67.67 86.47 33 3 LYS A 52 ? ? -156.25 30.31 34 3 LYS A 54 ? ? -144.90 31.90 35 3 TYR A 64 ? ? -135.97 -58.20 36 3 ASN A 70 ? ? 61.04 63.25 37 3 ILE A 85 ? ? 68.69 -67.59 38 3 SER A 86 ? ? 61.93 152.25 39 3 SER A 90 ? ? 60.42 81.00 40 4 THR A 10 ? ? 64.00 132.29 41 4 VAL A 11 ? ? -144.66 -67.01 42 4 LYS A 12 ? ? 59.81 175.56 43 4 SER A 23 ? ? -140.07 -47.43 44 4 SER A 40 ? ? 60.79 74.18 45 4 LYS A 52 ? ? -164.19 30.97 46 4 TYR A 64 ? ? -129.18 -52.75 47 4 ASN A 70 ? ? 61.45 64.34 48 4 SER A 86 ? ? 61.14 161.08 49 5 SER A 3 ? ? -98.22 35.68 50 5 SER A 5 ? ? -154.19 58.78 51 5 SER A 6 ? ? -160.09 -45.26 52 5 GLU A 8 ? ? 63.69 137.76 53 5 VAL A 11 ? ? -143.15 -46.76 54 5 HIS A 14 ? ? -147.14 48.59 55 5 GLU A 15 ? ? 60.78 158.60 56 5 SER A 23 ? ? -168.91 -56.81 57 5 ASN A 25 ? ? 66.78 75.45 58 5 PRO A 35 ? ? -52.02 -178.31 59 5 ALA A 39 ? ? -115.80 -169.90 60 5 LYS A 52 ? ? -143.41 35.40 61 5 TYR A 64 ? ? -137.20 -47.06 62 5 TYR A 82 ? ? -176.88 -36.32 63 5 SER A 86 ? ? 61.91 115.40 64 5 SER A 89 ? ? -160.52 99.15 65 6 SER A 3 ? ? 60.62 80.43 66 6 SER A 5 ? ? -166.38 32.85 67 6 SER A 6 ? ? -135.74 -56.33 68 6 THR A 22 ? ? -98.88 31.24 69 6 SER A 23 ? ? -147.38 -47.53 70 6 PRO A 35 ? ? -69.76 -169.92 71 6 PHE A 38 ? ? -151.50 -46.52 72 6 SER A 50 ? ? -110.95 -169.15 73 6 LYS A 52 ? ? -148.39 37.47 74 6 TYR A 64 ? ? -154.41 -47.28 75 6 ASN A 70 ? ? 60.82 61.29 76 6 ARG A 83 ? ? 62.28 -173.57 77 6 SER A 86 ? ? -167.05 88.05 78 6 SER A 89 ? ? -64.44 94.08 79 6 SER A 90 ? ? -171.04 35.08 80 7 SER A 5 ? ? 62.57 119.26 81 7 VAL A 11 ? ? -135.43 -47.06 82 7 LEU A 13 ? ? 60.08 103.30 83 7 TYR A 71 ? ? -127.73 -53.70 84 7 SER A 89 ? ? -60.03 87.96 85 8 SER A 23 ? ? -134.45 -47.18 86 8 ARG A 49 ? ? -99.55 32.53 87 8 ALA A 51 ? ? -68.15 75.95 88 8 LYS A 54 ? ? -145.83 -47.39 89 8 TYR A 64 ? ? -145.99 -49.94 90 8 ASN A 70 ? ? 61.70 61.84 91 8 TYR A 71 ? ? -133.65 -46.59 92 8 TYR A 82 ? ? -143.92 -46.90 93 8 SER A 86 ? ? -164.01 74.71 94 9 GLU A 8 ? ? 60.67 100.92 95 9 THR A 10 ? ? 60.01 168.03 96 9 SER A 23 ? ? -164.51 -57.98 97 9 ASN A 25 ? ? 65.17 77.18 98 9 LYS A 52 ? ? -142.03 31.08 99 9 LYS A 54 ? ? -144.00 -50.12 100 9 ARG A 83 ? ? -79.83 -169.30 101 9 ILE A 85 ? ? -103.50 77.82 102 9 SER A 89 ? ? -98.59 33.33 103 10 GLU A 8 ? ? -161.13 98.53 104 10 HIS A 14 ? ? -165.56 36.68 105 10 GLU A 15 ? ? 61.29 113.65 106 10 THR A 22 ? ? -99.27 31.25 107 10 SER A 23 ? ? -143.47 -47.39 108 10 LYS A 52 ? ? -155.56 30.34 109 10 LYS A 54 ? ? -154.28 -46.96 110 10 TYR A 64 ? ? -150.95 -46.64 111 10 CYS A 67 ? ? -146.61 -70.72 112 11 SER A 6 ? ? 64.76 83.93 113 11 VAL A 11 ? ? -158.05 -43.97 114 11 ASP A 37 ? ? -107.96 40.68 115 11 PHE A 38 ? ? -159.27 -45.76 116 11 SER A 40 ? ? 61.85 89.75 117 11 SER A 50 ? ? -170.41 -173.58 118 11 LYS A 54 ? ? -151.62 -46.97 119 11 CYS A 67 ? ? -176.82 -176.74 120 11 TYR A 82 ? ? -177.95 -62.10 121 11 ARG A 83 ? ? 67.80 -69.28 122 12 SER A 2 ? ? 58.61 -172.47 123 12 LYS A 12 ? ? 60.58 161.49 124 12 ASN A 25 ? ? 53.38 87.24 125 12 SER A 50 ? ? -173.61 -175.49 126 12 LYS A 52 ? ? -141.09 33.96 127 12 TYR A 64 ? ? -135.39 -56.35 128 12 TYR A 82 ? ? -160.07 29.38 129 12 ARG A 83 ? ? 57.20 91.79 130 12 ILE A 85 ? ? -174.85 133.86 131 12 SER A 86 ? ? -155.89 -48.56 132 12 PRO A 88 ? ? -68.27 66.66 133 12 SER A 90 ? ? -176.63 -50.02 134 13 SER A 6 ? ? 62.83 104.92 135 13 GLU A 8 ? ? 61.76 115.62 136 13 THR A 22 ? ? -98.73 31.47 137 13 ASN A 25 ? ? 54.70 83.99 138 13 LYS A 52 ? ? -157.04 30.35 139 13 ASN A 70 ? ? 61.08 64.56 140 13 TYR A 71 ? ? -125.15 -61.04 141 13 TYR A 82 ? ? -139.98 -46.82 142 13 ARG A 83 ? ? 63.80 137.12 143 13 SER A 86 ? ? 63.58 135.75 144 13 SER A 89 ? ? -130.91 -53.03 145 14 THR A 10 ? ? -167.05 35.35 146 14 THR A 22 ? ? -99.00 31.08 147 14 SER A 23 ? ? -141.66 -47.28 148 14 PRO A 35 ? ? -53.03 -174.76 149 14 ALA A 51 ? ? -64.79 86.45 150 14 LYS A 52 ? ? -147.03 31.91 151 14 LYS A 54 ? ? -152.30 -47.11 152 14 ARG A 83 ? ? -104.07 -65.79 153 14 SER A 86 ? ? 60.77 166.43 154 14 SER A 90 ? ? 60.60 89.94 155 15 SER A 3 ? ? -132.11 -60.42 156 15 SER A 5 ? ? 60.32 163.71 157 15 SER A 6 ? ? 60.17 179.97 158 15 LYS A 12 ? ? -100.02 -169.63 159 15 THR A 22 ? ? -99.48 31.67 160 15 SER A 23 ? ? -151.13 -47.39 161 15 LYS A 52 ? ? -154.30 36.14 162 15 LYS A 54 ? ? -123.21 -51.25 163 15 ASP A 56 ? ? -98.66 31.42 164 15 CYS A 67 ? ? -173.80 -178.90 165 15 ASN A 70 ? ? 62.28 62.27 166 15 TYR A 71 ? ? -125.78 -52.11 167 15 ARG A 83 ? ? 53.06 -177.96 168 15 ILE A 85 ? ? 63.21 122.13 169 15 SER A 86 ? ? 60.54 177.05 170 15 PRO A 88 ? ? -52.26 96.76 171 16 SER A 6 ? ? 60.13 160.40 172 16 GLU A 8 ? ? 60.14 162.40 173 16 THR A 10 ? ? 45.11 -167.10 174 16 LYS A 12 ? ? 63.18 143.60 175 16 SER A 23 ? ? -143.22 -47.57 176 16 PRO A 35 ? ? -52.33 170.39 177 16 LYS A 52 ? ? -146.99 48.38 178 16 LYS A 54 ? ? -144.66 31.73 179 16 TYR A 64 ? ? -130.77 -48.28 180 16 ASN A 70 ? ? 62.59 61.26 181 16 ILE A 85 ? ? 60.44 85.86 182 16 PRO A 88 ? ? -52.30 175.20 183 17 SER A 3 ? ? -154.10 -52.95 184 17 SER A 6 ? ? -164.76 91.64 185 17 VAL A 11 ? ? -149.80 -58.25 186 17 GLU A 15 ? ? 60.90 113.76 187 17 SER A 23 ? ? -93.10 -73.69 188 17 LYS A 52 ? ? -155.63 31.37 189 17 ASP A 56 ? ? -98.42 30.75 190 17 ASP A 61 ? ? -98.77 30.06 191 17 TYR A 64 ? ? -132.48 -56.37 192 17 TYR A 82 ? ? -143.87 -46.94 193 17 ARG A 83 ? ? -171.90 145.44 194 18 SER A 2 ? ? -99.19 31.68 195 18 LEU A 13 ? ? 63.42 136.38 196 18 THR A 22 ? ? -98.71 31.44 197 18 SER A 23 ? ? -131.72 -46.28 198 18 SER A 40 ? ? 61.37 105.71 199 18 LYS A 54 ? ? -150.18 42.44 200 18 TYR A 82 ? ? -173.50 120.79 201 18 SER A 86 ? ? -111.76 -75.22 202 19 SER A 2 ? ? -135.61 -47.59 203 19 LEU A 13 ? ? 59.85 106.35 204 19 SER A 23 ? ? -134.06 -46.81 205 19 PHE A 38 ? ? -149.16 -46.97 206 19 ARG A 49 ? ? -97.93 36.95 207 19 SER A 50 ? ? -170.15 148.29 208 19 ALA A 51 ? ? -66.78 97.04 209 19 LYS A 52 ? ? -162.10 35.48 210 19 LYS A 54 ? ? -147.59 31.53 211 19 TYR A 64 ? ? -139.83 -48.17 212 19 SER A 89 ? ? 56.70 103.79 213 19 SER A 90 ? ? 59.33 164.07 214 20 SER A 5 ? ? -152.61 30.03 215 20 SER A 6 ? ? 58.73 175.33 216 20 THR A 10 ? ? 45.32 -167.61 217 20 HIS A 14 ? ? -160.06 34.60 218 20 GLU A 15 ? ? 60.52 110.95 219 20 SER A 23 ? ? -138.64 -47.44 220 20 LYS A 52 ? ? -146.10 37.55 221 20 ILE A 85 ? ? 61.76 112.70 #