data_1WHR # _entry.id 1WHR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1WHR pdb_00001whr 10.2210/pdb1whr/pdb RCSB RCSB023592 ? ? WWPDB D_1000023592 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsk002000978.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1WHR _pdbx_database_status.recvd_initial_deposition_date 2004-05-28 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nagata, T.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Terada, T.' 5 'Shirouzu, M.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of the R3H domain from human hypothetical protein BAA76846' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nagata, T.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Terada, T.' 5 ? primary 'Shirouzu, M.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Hypothetical KIAA1002 protein' _entity.formula_weight 14266.053 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'R3H domain' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGTDSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEILEFINDNNNQFKKFPQMTSYHRMLLHRVAAYFGMDHNVDQ TGKAVIINKTSNTRIPEQRFSEHIKDEKNTEFQQRFILSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGTDSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEILEFINDNNNQFKKFPQMTSYHRMLLHRVAAYFGMDHNVDQ TGKAVIINKTSNTRIPEQRFSEHIKDEKNTEFQQRFILSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsk002000978.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 THR n 1 9 ASP n 1 10 SER n 1 11 THR n 1 12 GLY n 1 13 ILE n 1 14 ASP n 1 15 LEU n 1 16 HIS n 1 17 GLU n 1 18 PHE n 1 19 LEU n 1 20 VAL n 1 21 ASN n 1 22 THR n 1 23 LEU n 1 24 LYS n 1 25 LYS n 1 26 ASN n 1 27 PRO n 1 28 ARG n 1 29 ASP n 1 30 ARG n 1 31 MET n 1 32 MET n 1 33 LEU n 1 34 LEU n 1 35 LYS n 1 36 LEU n 1 37 GLU n 1 38 GLN n 1 39 GLU n 1 40 ILE n 1 41 LEU n 1 42 GLU n 1 43 PHE n 1 44 ILE n 1 45 ASN n 1 46 ASP n 1 47 ASN n 1 48 ASN n 1 49 ASN n 1 50 GLN n 1 51 PHE n 1 52 LYS n 1 53 LYS n 1 54 PHE n 1 55 PRO n 1 56 GLN n 1 57 MET n 1 58 THR n 1 59 SER n 1 60 TYR n 1 61 HIS n 1 62 ARG n 1 63 MET n 1 64 LEU n 1 65 LEU n 1 66 HIS n 1 67 ARG n 1 68 VAL n 1 69 ALA n 1 70 ALA n 1 71 TYR n 1 72 PHE n 1 73 GLY n 1 74 MET n 1 75 ASP n 1 76 HIS n 1 77 ASN n 1 78 VAL n 1 79 ASP n 1 80 GLN n 1 81 THR n 1 82 GLY n 1 83 LYS n 1 84 ALA n 1 85 VAL n 1 86 ILE n 1 87 ILE n 1 88 ASN n 1 89 LYS n 1 90 THR n 1 91 SER n 1 92 ASN n 1 93 THR n 1 94 ARG n 1 95 ILE n 1 96 PRO n 1 97 GLU n 1 98 GLN n 1 99 ARG n 1 100 PHE n 1 101 SER n 1 102 GLU n 1 103 HIS n 1 104 ILE n 1 105 LYS n 1 106 ASP n 1 107 GLU n 1 108 LYS n 1 109 ASN n 1 110 THR n 1 111 GLU n 1 112 PHE n 1 113 GLN n 1 114 GLN n 1 115 ARG n 1 116 PHE n 1 117 ILE n 1 118 LEU n 1 119 SER n 1 120 GLY n 1 121 PRO n 1 122 SER n 1 123 SER n 1 124 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'RIKEN CDNA hk09859' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P040119-75 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'CELL-FREE PROTEIN SYNTHESIS' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code K1002_HUMAN _struct_ref.pdbx_db_accession Q9Y2K5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TDSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEILEFINDNNNQFKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVII NKTSNTRIPEQRFSEHIKDEKNTEFQQRFIL ; _struct_ref.pdbx_align_begin 133 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1WHR _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 118 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9Y2K5 _struct_ref_seq.db_align_beg 133 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 243 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 133 _struct_ref_seq.pdbx_auth_seq_align_end 243 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1WHR GLY A 1 ? UNP Q9Y2K5 ? ? 'cloning artifact' 126 1 1 1WHR SER A 2 ? UNP Q9Y2K5 ? ? 'cloning artifact' 127 2 1 1WHR SER A 3 ? UNP Q9Y2K5 ? ? 'cloning artifact' 128 3 1 1WHR GLY A 4 ? UNP Q9Y2K5 ? ? 'cloning artifact' 129 4 1 1WHR SER A 5 ? UNP Q9Y2K5 ? ? 'cloning artifact' 130 5 1 1WHR SER A 6 ? UNP Q9Y2K5 ? ? 'cloning artifact' 131 6 1 1WHR GLY A 7 ? UNP Q9Y2K5 ? ? 'cloning artifact' 132 7 1 1WHR SER A 119 ? UNP Q9Y2K5 ? ? 'cloning artifact' 244 8 1 1WHR GLY A 120 ? UNP Q9Y2K5 ? ? 'cloning artifact' 245 9 1 1WHR PRO A 121 ? UNP Q9Y2K5 ? ? 'cloning artifact' 246 10 1 1WHR SER A 122 ? UNP Q9Y2K5 ? ? 'cloning artifact' 247 11 1 1WHR SER A 123 ? UNP Q9Y2K5 ? ? 'cloning artifact' 248 12 1 1WHR GLY A 124 ? UNP Q9Y2K5 ? ? 'cloning artifact' 249 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 3D_13C-separated_NOESY 2 1 1 3D_15N-separated_NOESY # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 100mM _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents 'U-15N, 13C labelled protein; 20mM d-Tris-HCl; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O; 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.field_strength 800 # _pdbx_nmr_refine.entry_id 1WHR _pdbx_nmr_refine.method 'torsion angle dynamics, simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1WHR _pdbx_nmr_details.text 'The structure was determined using triple-resonance NMR spectroscopy.' # _pdbx_nmr_ensemble.entry_id 1WHR _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1WHR _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal NMRView 5.0.4 'data analysis' Johnson 1 CYANA 2.0 'structure solution' Guentert 2 NMRPipe 2.3 processing Delaglio 3 KUJIRA 0.901 'data analysis' 'Kobayashi, N.' 4 CYANA 2.0 refinement Guentert 5 # _exptl.entry_id 1WHR _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1WHR _struct.title 'Solution structure of the R3H domain from human hypothetical protein BAA76846' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1WHR _struct_keywords.pdbx_keywords 'Structural genomics, unknown function' _struct_keywords.text 'R3H domain, Structural genomics, RIKEN Structural Genomics/Proteomics Initiative, RSGI, unknown function' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 15 ? LYS A 25 ? LEU A 140 LYS A 150 1 ? 11 HELX_P HELX_P2 2 ARG A 30 ? ASN A 45 ? ARG A 155 ASN A 170 1 ? 16 HELX_P HELX_P3 3 SER A 59 ? PHE A 72 ? SER A 184 PHE A 197 1 ? 14 HELX_P HELX_P4 4 PHE A 100 ? GLU A 102 ? PHE A 225 GLU A 227 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 51 ? LYS A 53 ? PHE A 176 LYS A 178 A 2 VAL A 85 ? ASN A 88 ? VAL A 210 ASN A 213 A 3 HIS A 76 ? VAL A 78 ? HIS A 201 VAL A 203 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 52 ? N LYS A 177 O ILE A 87 ? O ILE A 212 A 2 3 O ILE A 86 ? O ILE A 211 N ASN A 77 ? N ASN A 202 # _database_PDB_matrix.entry_id 1WHR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1WHR _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 126 126 GLY GLY A . n A 1 2 SER 2 127 127 SER SER A . n A 1 3 SER 3 128 128 SER SER A . n A 1 4 GLY 4 129 129 GLY GLY A . n A 1 5 SER 5 130 130 SER SER A . n A 1 6 SER 6 131 131 SER SER A . n A 1 7 GLY 7 132 132 GLY GLY A . n A 1 8 THR 8 133 133 THR THR A . n A 1 9 ASP 9 134 134 ASP ASP A . n A 1 10 SER 10 135 135 SER SER A . n A 1 11 THR 11 136 136 THR THR A . n A 1 12 GLY 12 137 137 GLY GLY A . n A 1 13 ILE 13 138 138 ILE ILE A . n A 1 14 ASP 14 139 139 ASP ASP A . n A 1 15 LEU 15 140 140 LEU LEU A . n A 1 16 HIS 16 141 141 HIS HIS A . n A 1 17 GLU 17 142 142 GLU GLU A . n A 1 18 PHE 18 143 143 PHE PHE A . n A 1 19 LEU 19 144 144 LEU LEU A . n A 1 20 VAL 20 145 145 VAL VAL A . n A 1 21 ASN 21 146 146 ASN ASN A . n A 1 22 THR 22 147 147 THR THR A . n A 1 23 LEU 23 148 148 LEU LEU A . n A 1 24 LYS 24 149 149 LYS LYS A . n A 1 25 LYS 25 150 150 LYS LYS A . n A 1 26 ASN 26 151 151 ASN ASN A . n A 1 27 PRO 27 152 152 PRO PRO A . n A 1 28 ARG 28 153 153 ARG ARG A . n A 1 29 ASP 29 154 154 ASP ASP A . n A 1 30 ARG 30 155 155 ARG ARG A . n A 1 31 MET 31 156 156 MET MET A . n A 1 32 MET 32 157 157 MET MET A . n A 1 33 LEU 33 158 158 LEU LEU A . n A 1 34 LEU 34 159 159 LEU LEU A . n A 1 35 LYS 35 160 160 LYS LYS A . n A 1 36 LEU 36 161 161 LEU LEU A . n A 1 37 GLU 37 162 162 GLU GLU A . n A 1 38 GLN 38 163 163 GLN GLN A . n A 1 39 GLU 39 164 164 GLU GLU A . n A 1 40 ILE 40 165 165 ILE ILE A . n A 1 41 LEU 41 166 166 LEU LEU A . n A 1 42 GLU 42 167 167 GLU GLU A . n A 1 43 PHE 43 168 168 PHE PHE A . n A 1 44 ILE 44 169 169 ILE ILE A . n A 1 45 ASN 45 170 170 ASN ASN A . n A 1 46 ASP 46 171 171 ASP ASP A . n A 1 47 ASN 47 172 172 ASN ASN A . n A 1 48 ASN 48 173 173 ASN ASN A . n A 1 49 ASN 49 174 174 ASN ASN A . n A 1 50 GLN 50 175 175 GLN GLN A . n A 1 51 PHE 51 176 176 PHE PHE A . n A 1 52 LYS 52 177 177 LYS LYS A . n A 1 53 LYS 53 178 178 LYS LYS A . n A 1 54 PHE 54 179 179 PHE PHE A . n A 1 55 PRO 55 180 180 PRO PRO A . n A 1 56 GLN 56 181 181 GLN GLN A . n A 1 57 MET 57 182 182 MET MET A . n A 1 58 THR 58 183 183 THR THR A . n A 1 59 SER 59 184 184 SER SER A . n A 1 60 TYR 60 185 185 TYR TYR A . n A 1 61 HIS 61 186 186 HIS HIS A . n A 1 62 ARG 62 187 187 ARG ARG A . n A 1 63 MET 63 188 188 MET MET A . n A 1 64 LEU 64 189 189 LEU LEU A . n A 1 65 LEU 65 190 190 LEU LEU A . n A 1 66 HIS 66 191 191 HIS HIS A . n A 1 67 ARG 67 192 192 ARG ARG A . n A 1 68 VAL 68 193 193 VAL VAL A . n A 1 69 ALA 69 194 194 ALA ALA A . n A 1 70 ALA 70 195 195 ALA ALA A . n A 1 71 TYR 71 196 196 TYR TYR A . n A 1 72 PHE 72 197 197 PHE PHE A . n A 1 73 GLY 73 198 198 GLY GLY A . n A 1 74 MET 74 199 199 MET MET A . n A 1 75 ASP 75 200 200 ASP ASP A . n A 1 76 HIS 76 201 201 HIS HIS A . n A 1 77 ASN 77 202 202 ASN ASN A . n A 1 78 VAL 78 203 203 VAL VAL A . n A 1 79 ASP 79 204 204 ASP ASP A . n A 1 80 GLN 80 205 205 GLN GLN A . n A 1 81 THR 81 206 206 THR THR A . n A 1 82 GLY 82 207 207 GLY GLY A . n A 1 83 LYS 83 208 208 LYS LYS A . n A 1 84 ALA 84 209 209 ALA ALA A . n A 1 85 VAL 85 210 210 VAL VAL A . n A 1 86 ILE 86 211 211 ILE ILE A . n A 1 87 ILE 87 212 212 ILE ILE A . n A 1 88 ASN 88 213 213 ASN ASN A . n A 1 89 LYS 89 214 214 LYS LYS A . n A 1 90 THR 90 215 215 THR THR A . n A 1 91 SER 91 216 216 SER SER A . n A 1 92 ASN 92 217 217 ASN ASN A . n A 1 93 THR 93 218 218 THR THR A . n A 1 94 ARG 94 219 219 ARG ARG A . n A 1 95 ILE 95 220 220 ILE ILE A . n A 1 96 PRO 96 221 221 PRO PRO A . n A 1 97 GLU 97 222 222 GLU GLU A . n A 1 98 GLN 98 223 223 GLN GLN A . n A 1 99 ARG 99 224 224 ARG ARG A . n A 1 100 PHE 100 225 225 PHE PHE A . n A 1 101 SER 101 226 226 SER SER A . n A 1 102 GLU 102 227 227 GLU GLU A . n A 1 103 HIS 103 228 228 HIS HIS A . n A 1 104 ILE 104 229 229 ILE ILE A . n A 1 105 LYS 105 230 230 LYS LYS A . n A 1 106 ASP 106 231 231 ASP ASP A . n A 1 107 GLU 107 232 232 GLU GLU A . n A 1 108 LYS 108 233 233 LYS LYS A . n A 1 109 ASN 109 234 234 ASN ASN A . n A 1 110 THR 110 235 235 THR THR A . n A 1 111 GLU 111 236 236 GLU GLU A . n A 1 112 PHE 112 237 237 PHE PHE A . n A 1 113 GLN 113 238 238 GLN GLN A . n A 1 114 GLN 114 239 239 GLN GLN A . n A 1 115 ARG 115 240 240 ARG ARG A . n A 1 116 PHE 116 241 241 PHE PHE A . n A 1 117 ILE 117 242 242 ILE ILE A . n A 1 118 LEU 118 243 243 LEU LEU A . n A 1 119 SER 119 244 244 SER SER A . n A 1 120 GLY 120 245 245 GLY GLY A . n A 1 121 PRO 121 246 246 PRO PRO A . n A 1 122 SER 122 247 247 SER SER A . n A 1 123 SER 123 248 248 SER SER A . n A 1 124 GLY 124 249 249 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-11-28 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 171 ? ? -59.09 108.55 2 1 HIS A 191 ? ? -37.31 -39.03 3 1 PRO A 221 ? ? -69.76 -168.31 4 1 PHE A 241 ? ? 36.12 41.66 5 2 SER A 130 ? ? -173.24 122.93 6 2 THR A 133 ? ? -170.47 148.18 7 2 LYS A 149 ? ? -91.07 -71.43 8 2 PRO A 180 ? ? -69.74 -168.92 9 2 GLU A 232 ? ? -57.67 89.51 10 2 LYS A 233 ? ? -162.68 107.24 11 2 ARG A 240 ? ? -174.96 144.13 12 2 PHE A 241 ? ? -172.63 131.02 13 3 THR A 133 ? ? 37.28 40.15 14 3 GLN A 181 ? ? -39.99 148.08 15 3 SER A 226 ? ? -36.62 -36.88 16 3 PRO A 246 ? ? -69.73 86.66 17 4 ASP A 139 ? ? 39.92 32.29 18 4 MET A 157 ? ? -47.64 -73.46 19 4 GLN A 181 ? ? -39.63 128.36 20 4 PRO A 221 ? ? -69.74 -167.80 21 5 SER A 127 ? ? -171.63 145.43 22 5 GLN A 181 ? ? -39.19 127.27 23 5 HIS A 191 ? ? -38.44 -37.68 24 5 ILE A 229 ? ? -97.38 30.01 25 5 GLU A 232 ? ? -89.16 48.32 26 6 ILE A 138 ? ? -57.20 171.12 27 6 ASP A 171 ? ? -56.33 102.18 28 6 HIS A 191 ? ? -39.96 -39.08 29 6 ASN A 234 ? ? -174.84 123.02 30 6 PHE A 237 ? ? -173.37 127.28 31 6 ILE A 242 ? ? -173.56 140.86 32 6 PRO A 246 ? ? -69.80 -167.52 33 7 ASP A 139 ? ? 36.81 41.45 34 7 GLN A 181 ? ? -34.83 126.83 35 7 PRO A 221 ? ? -69.73 -179.00 36 8 ILE A 138 ? ? -47.30 156.66 37 8 HIS A 141 ? ? -39.40 -70.35 38 8 ASN A 217 ? ? -49.67 -18.63 39 8 GLU A 236 ? ? -174.11 143.31 40 8 PHE A 237 ? ? -166.82 108.76 41 9 SER A 131 ? ? -174.75 144.97 42 9 ILE A 138 ? ? -36.04 112.66 43 9 ASP A 139 ? ? -61.63 88.40 44 9 LYS A 149 ? ? -90.71 -71.85 45 9 ARG A 155 ? ? -37.01 -29.08 46 9 SER A 184 ? ? -43.04 -73.75 47 9 HIS A 191 ? ? -36.84 -39.46 48 9 SER A 244 ? ? -40.96 150.86 49 9 PRO A 246 ? ? -69.80 -169.56 50 10 ASP A 139 ? ? 34.53 39.52 51 10 MET A 157 ? ? -48.27 -71.10 52 10 GLN A 175 ? ? -104.15 42.06 53 10 GLU A 236 ? ? -65.04 85.78 54 10 SER A 244 ? ? -38.68 154.22 55 11 SER A 127 ? ? -37.20 145.32 56 11 THR A 133 ? ? 36.73 42.73 57 11 ASP A 139 ? ? 35.94 45.19 58 11 THR A 218 ? ? -58.90 99.75 59 11 THR A 235 ? ? -38.62 148.71 60 11 ILE A 242 ? ? -173.56 129.29 61 12 ASP A 139 ? ? -65.27 89.11 62 12 ARG A 155 ? ? -34.30 -33.64 63 12 GLN A 175 ? ? -130.38 -33.84 64 12 GLN A 181 ? ? -40.53 155.31 65 12 PRO A 221 ? ? -69.72 -166.10 66 12 LYS A 233 ? ? -55.11 109.04 67 12 ASN A 234 ? ? -58.50 102.55 68 12 PRO A 246 ? ? -69.80 -174.06 69 13 THR A 133 ? ? -42.87 151.43 70 13 ASP A 134 ? ? -41.96 155.79 71 13 LYS A 149 ? ? -91.37 -66.71 72 13 PRO A 152 ? ? -69.77 1.37 73 13 ARG A 155 ? ? -38.53 -27.90 74 13 GLN A 175 ? ? -131.42 -42.28 75 13 THR A 218 ? ? -58.37 100.27 76 13 PHE A 241 ? ? -38.12 103.64 77 13 LEU A 243 ? ? -35.34 99.59 78 13 SER A 248 ? ? -35.86 115.91 79 14 SER A 128 ? ? -171.35 117.81 80 14 THR A 133 ? ? -170.99 120.17 81 14 LEU A 158 ? ? -33.00 -36.70 82 14 PRO A 180 ? ? -69.75 -177.39 83 14 ILE A 229 ? ? -85.67 31.98 84 14 GLN A 239 ? ? -52.79 170.88 85 14 PRO A 246 ? ? -69.82 85.04 86 15 SER A 184 ? ? -37.39 -35.79 87 15 HIS A 191 ? ? -36.83 -39.48 88 15 THR A 235 ? ? -172.98 142.04 89 15 GLU A 236 ? ? -42.47 151.64 90 15 SER A 248 ? ? -81.63 42.07 91 16 LEU A 140 ? ? -93.15 -67.42 92 16 ARG A 155 ? ? -34.47 -36.70 93 16 PRO A 221 ? ? -69.78 -166.91 94 16 LYS A 230 ? ? -55.93 107.35 95 16 ASN A 234 ? ? -59.03 108.55 96 16 PHE A 241 ? ? -175.02 116.69 97 17 SER A 131 ? ? -102.13 42.58 98 17 SER A 135 ? ? -92.53 41.16 99 17 ILE A 138 ? ? -38.48 119.01 100 17 GLN A 181 ? ? -36.35 134.75 101 17 ASN A 217 ? ? -49.55 -19.03 102 17 PRO A 221 ? ? -69.78 -164.48 103 17 THR A 235 ? ? -167.42 118.50 104 17 GLU A 236 ? ? -170.71 144.50 105 17 PRO A 246 ? ? -69.76 -179.93 106 18 SER A 127 ? ? -171.92 141.96 107 18 ILE A 138 ? ? -45.18 164.24 108 18 ARG A 155 ? ? -37.95 -29.34 109 18 ASN A 234 ? ? -174.78 128.68 110 18 PHE A 237 ? ? -171.28 141.92 111 18 PHE A 241 ? ? -162.30 118.45 112 19 ASP A 134 ? ? -161.71 108.29 113 19 LEU A 140 ? ? -90.70 -60.55 114 19 ARG A 153 ? ? -91.98 -62.51 115 19 ARG A 155 ? ? -34.37 -35.86 116 19 GLN A 175 ? ? -132.03 -32.76 117 19 PRO A 180 ? ? -69.76 -166.31 118 19 GLU A 232 ? ? -163.01 108.44 119 19 ASN A 234 ? ? -109.77 -62.55 120 19 ARG A 240 ? ? -171.03 142.92 121 19 LEU A 243 ? ? -132.22 -34.64 122 19 SER A 247 ? ? -37.86 111.98 123 20 SER A 128 ? ? -49.21 98.83 124 20 LEU A 144 ? ? -49.05 -73.70 125 20 ARG A 155 ? ? -37.51 -39.82 126 20 PRO A 180 ? ? -69.79 -178.53 127 20 PHE A 197 ? ? -97.12 30.32 128 20 PRO A 221 ? ? -69.82 -171.30 129 20 LYS A 233 ? ? -171.08 107.21 130 20 PHE A 237 ? ? -174.27 145.31 131 20 SER A 247 ? ? -172.78 143.04 132 20 SER A 248 ? ? -44.88 106.88 #