data_1WHU # _entry.id 1WHU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1WHU pdb_00001whu 10.2210/pdb1whu/pdb RCSB RCSB023593 ? ? WWPDB D_1000023593 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id mmt007006722.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1WHU _pdbx_database_status.recvd_initial_deposition_date 2004-05-28 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nagata, T.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Terada, T.' 5 'Shirouzu, M.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of the alpha-helical domain from mouse hypothetical PNPase' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nagata, T.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Terada, T.' 5 ? primary 'Shirouzu, M.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description ;polynucleotide phosphorylase; 3'-5' RNA exonuclease ; _entity.formula_weight 11822.254 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 2.7.7.8 _entity.pdbx_mutation ? _entity.pdbx_fragment 'alpha-helical domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'hypothetical PNPase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGPQKIFTPSAEIVKYTKIIAMEKLYAVFTDYEHDKVSRDEAVNKIRLDTEEHLKEKFPEVDQFEIIESFNIVAK EVFRSIILNEYKRCDGRDSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGPQKIFTPSAEIVKYTKIIAMEKLYAVFTDYEHDKVSRDEAVNKIRLDTEEHLKEKFPEVDQFEIIESFNIVAK EVFRSIILNEYKRCDGRDSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier mmt007006722.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 PRO n 1 9 GLN n 1 10 LYS n 1 11 ILE n 1 12 PHE n 1 13 THR n 1 14 PRO n 1 15 SER n 1 16 ALA n 1 17 GLU n 1 18 ILE n 1 19 VAL n 1 20 LYS n 1 21 TYR n 1 22 THR n 1 23 LYS n 1 24 ILE n 1 25 ILE n 1 26 ALA n 1 27 MET n 1 28 GLU n 1 29 LYS n 1 30 LEU n 1 31 TYR n 1 32 ALA n 1 33 VAL n 1 34 PHE n 1 35 THR n 1 36 ASP n 1 37 TYR n 1 38 GLU n 1 39 HIS n 1 40 ASP n 1 41 LYS n 1 42 VAL n 1 43 SER n 1 44 ARG n 1 45 ASP n 1 46 GLU n 1 47 ALA n 1 48 VAL n 1 49 ASN n 1 50 LYS n 1 51 ILE n 1 52 ARG n 1 53 LEU n 1 54 ASP n 1 55 THR n 1 56 GLU n 1 57 GLU n 1 58 HIS n 1 59 LEU n 1 60 LYS n 1 61 GLU n 1 62 LYS n 1 63 PHE n 1 64 PRO n 1 65 GLU n 1 66 VAL n 1 67 ASP n 1 68 GLN n 1 69 PHE n 1 70 GLU n 1 71 ILE n 1 72 ILE n 1 73 GLU n 1 74 SER n 1 75 PHE n 1 76 ASN n 1 77 ILE n 1 78 VAL n 1 79 ALA n 1 80 LYS n 1 81 GLU n 1 82 VAL n 1 83 PHE n 1 84 ARG n 1 85 SER n 1 86 ILE n 1 87 ILE n 1 88 LEU n 1 89 ASN n 1 90 GLU n 1 91 TYR n 1 92 LYS n 1 93 ARG n 1 94 CYS n 1 95 ASP n 1 96 GLY n 1 97 ARG n 1 98 ASP n 1 99 SER n 1 100 GLY n 1 101 PRO n 1 102 SER n 1 103 SER n 1 104 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene 'RIKEN CDNA 1200003F12' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P031222-56 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'CELL-FREE PROTEIN SYNTHESIS' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PNPT1_MOUSE _struct_ref.pdbx_db_accession Q8K1R3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PQKIFTPSAEIVKYTKIIAMEKLYAVFTDYEHDKVSRDEAVNKIRLDTEEHLKEKFPEVDQFEIIESFNIVAKEVFRSII LNEYKRCDGRD ; _struct_ref.pdbx_align_begin 273 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1WHU _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 98 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8K1R3 _struct_ref_seq.db_align_beg 273 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 363 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 274 _struct_ref_seq.pdbx_auth_seq_align_end 364 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1WHU GLY A 1 ? UNP Q8K1R3 ? ? 'cloning artifact' 267 1 1 1WHU SER A 2 ? UNP Q8K1R3 ? ? 'cloning artifact' 268 2 1 1WHU SER A 3 ? UNP Q8K1R3 ? ? 'cloning artifact' 269 3 1 1WHU GLY A 4 ? UNP Q8K1R3 ? ? 'cloning artifact' 270 4 1 1WHU SER A 5 ? UNP Q8K1R3 ? ? 'cloning artifact' 271 5 1 1WHU SER A 6 ? UNP Q8K1R3 ? ? 'cloning artifact' 272 6 1 1WHU GLY A 7 ? UNP Q8K1R3 ? ? 'cloning artifact' 273 7 1 1WHU SER A 99 ? UNP Q8K1R3 ? ? 'cloning artifact' 365 8 1 1WHU GLY A 100 ? UNP Q8K1R3 ? ? 'cloning artifact' 366 9 1 1WHU PRO A 101 ? UNP Q8K1R3 ? ? 'cloning artifact' 367 10 1 1WHU SER A 102 ? UNP Q8K1R3 ? ? 'cloning artifact' 368 11 1 1WHU SER A 103 ? UNP Q8K1R3 ? ? 'cloning artifact' 369 12 1 1WHU GLY A 104 ? UNP Q8K1R3 ? ? 'cloning artifact' 370 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 3D_13C-separated_NOESY 2 1 1 3D_15N-separated_NOESY # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 100mM _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.12mM PROTEIN U-15N, 13C; 20mM d-Tris-HCl; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O; 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.field_strength 800 # _pdbx_nmr_refine.entry_id 1WHU _pdbx_nmr_refine.method 'torsion angle dynamics, simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1WHU _pdbx_nmr_details.text 'The structure was determined using triple-resonance NMR spectroscopy.' # _pdbx_nmr_ensemble.entry_id 1WHU _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1WHU _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal NMRView 5.0.4 'data analysis' Johnson 1 CYANA 2.0 'structure solution' Guentert 2 NMRPipe 2.3 processing Delaglio 3 KUJIRA 0.901 'data analysis' 'Kobayashi, N.' 4 CYANA 2.0 refinement Guentert 5 # _exptl.entry_id 1WHU _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1WHU _struct.title 'Solution structure of the alpha-helical domain from mouse hypothetical PNPase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1WHU _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;Polynucleotide phosphorylase, PNPase, alpha-helical domain, 3'-5' RNA exonuclease, STRUCTURAL GENOMICS, RIKEN Structural Genomics/Proteomics Initiative, RSGI, TRANSFERASE ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 16 ? PHE A 34 ? ALA A 282 PHE A 300 1 ? 19 HELX_P HELX_P2 2 SER A 43 ? LEU A 59 ? SER A 309 LEU A 325 1 ? 17 HELX_P HELX_P3 3 GLN A 68 ? ILE A 87 ? GLN A 334 ILE A 353 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 1WHU _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1WHU _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 267 267 GLY GLY A . n A 1 2 SER 2 268 268 SER SER A . n A 1 3 SER 3 269 269 SER SER A . n A 1 4 GLY 4 270 270 GLY GLY A . n A 1 5 SER 5 271 271 SER SER A . n A 1 6 SER 6 272 272 SER SER A . n A 1 7 GLY 7 273 273 GLY GLY A . n A 1 8 PRO 8 274 274 PRO PRO A . n A 1 9 GLN 9 275 275 GLN GLN A . n A 1 10 LYS 10 276 276 LYS LYS A . n A 1 11 ILE 11 277 277 ILE ILE A . n A 1 12 PHE 12 278 278 PHE PHE A . n A 1 13 THR 13 279 279 THR THR A . n A 1 14 PRO 14 280 280 PRO PRO A . n A 1 15 SER 15 281 281 SER SER A . n A 1 16 ALA 16 282 282 ALA ALA A . n A 1 17 GLU 17 283 283 GLU GLU A . n A 1 18 ILE 18 284 284 ILE ILE A . n A 1 19 VAL 19 285 285 VAL VAL A . n A 1 20 LYS 20 286 286 LYS LYS A . n A 1 21 TYR 21 287 287 TYR TYR A . n A 1 22 THR 22 288 288 THR THR A . n A 1 23 LYS 23 289 289 LYS LYS A . n A 1 24 ILE 24 290 290 ILE ILE A . n A 1 25 ILE 25 291 291 ILE ILE A . n A 1 26 ALA 26 292 292 ALA ALA A . n A 1 27 MET 27 293 293 MET MET A . n A 1 28 GLU 28 294 294 GLU GLU A . n A 1 29 LYS 29 295 295 LYS LYS A . n A 1 30 LEU 30 296 296 LEU LEU A . n A 1 31 TYR 31 297 297 TYR TYR A . n A 1 32 ALA 32 298 298 ALA ALA A . n A 1 33 VAL 33 299 299 VAL VAL A . n A 1 34 PHE 34 300 300 PHE PHE A . n A 1 35 THR 35 301 301 THR THR A . n A 1 36 ASP 36 302 302 ASP ASP A . n A 1 37 TYR 37 303 303 TYR TYR A . n A 1 38 GLU 38 304 304 GLU GLU A . n A 1 39 HIS 39 305 305 HIS HIS A . n A 1 40 ASP 40 306 306 ASP ASP A . n A 1 41 LYS 41 307 307 LYS LYS A . n A 1 42 VAL 42 308 308 VAL VAL A . n A 1 43 SER 43 309 309 SER SER A . n A 1 44 ARG 44 310 310 ARG ARG A . n A 1 45 ASP 45 311 311 ASP ASP A . n A 1 46 GLU 46 312 312 GLU GLU A . n A 1 47 ALA 47 313 313 ALA ALA A . n A 1 48 VAL 48 314 314 VAL VAL A . n A 1 49 ASN 49 315 315 ASN ASN A . n A 1 50 LYS 50 316 316 LYS LYS A . n A 1 51 ILE 51 317 317 ILE ILE A . n A 1 52 ARG 52 318 318 ARG ARG A . n A 1 53 LEU 53 319 319 LEU LEU A . n A 1 54 ASP 54 320 320 ASP ASP A . n A 1 55 THR 55 321 321 THR THR A . n A 1 56 GLU 56 322 322 GLU GLU A . n A 1 57 GLU 57 323 323 GLU GLU A . n A 1 58 HIS 58 324 324 HIS HIS A . n A 1 59 LEU 59 325 325 LEU LEU A . n A 1 60 LYS 60 326 326 LYS LYS A . n A 1 61 GLU 61 327 327 GLU GLU A . n A 1 62 LYS 62 328 328 LYS LYS A . n A 1 63 PHE 63 329 329 PHE PHE A . n A 1 64 PRO 64 330 330 PRO PRO A . n A 1 65 GLU 65 331 331 GLU GLU A . n A 1 66 VAL 66 332 332 VAL VAL A . n A 1 67 ASP 67 333 333 ASP ASP A . n A 1 68 GLN 68 334 334 GLN GLN A . n A 1 69 PHE 69 335 335 PHE PHE A . n A 1 70 GLU 70 336 336 GLU GLU A . n A 1 71 ILE 71 337 337 ILE ILE A . n A 1 72 ILE 72 338 338 ILE ILE A . n A 1 73 GLU 73 339 339 GLU GLU A . n A 1 74 SER 74 340 340 SER SER A . n A 1 75 PHE 75 341 341 PHE PHE A . n A 1 76 ASN 76 342 342 ASN ASN A . n A 1 77 ILE 77 343 343 ILE ILE A . n A 1 78 VAL 78 344 344 VAL VAL A . n A 1 79 ALA 79 345 345 ALA ALA A . n A 1 80 LYS 80 346 346 LYS LYS A . n A 1 81 GLU 81 347 347 GLU GLU A . n A 1 82 VAL 82 348 348 VAL VAL A . n A 1 83 PHE 83 349 349 PHE PHE A . n A 1 84 ARG 84 350 350 ARG ARG A . n A 1 85 SER 85 351 351 SER SER A . n A 1 86 ILE 86 352 352 ILE ILE A . n A 1 87 ILE 87 353 353 ILE ILE A . n A 1 88 LEU 88 354 354 LEU LEU A . n A 1 89 ASN 89 355 355 ASN ASN A . n A 1 90 GLU 90 356 356 GLU GLU A . n A 1 91 TYR 91 357 357 TYR TYR A . n A 1 92 LYS 92 358 358 LYS LYS A . n A 1 93 ARG 93 359 359 ARG ARG A . n A 1 94 CYS 94 360 360 CYS CYS A . n A 1 95 ASP 95 361 361 ASP ASP A . n A 1 96 GLY 96 362 362 GLY GLY A . n A 1 97 ARG 97 363 363 ARG ARG A . n A 1 98 ASP 98 364 364 ASP ASP A . n A 1 99 SER 99 365 365 SER SER A . n A 1 100 GLY 100 366 366 GLY GLY A . n A 1 101 PRO 101 367 367 PRO PRO A . n A 1 102 SER 102 368 368 SER SER A . n A 1 103 SER 103 369 369 SER SER A . n A 1 104 GLY 104 370 370 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-11-28 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 272 ? ? -174.99 124.53 2 1 PRO A 274 ? ? -69.74 2.83 3 1 PRO A 280 ? ? -69.75 -168.95 4 1 ARG A 318 ? ? -39.10 -32.74 5 1 LEU A 325 ? ? -94.40 -61.14 6 1 GLU A 356 ? ? -175.14 133.70 7 1 ARG A 363 ? ? -41.19 155.91 8 2 GLU A 294 ? ? -45.78 -70.37 9 2 VAL A 308 ? ? -38.98 -25.94 10 2 ARG A 310 ? ? -92.05 37.60 11 2 LEU A 325 ? ? -94.18 -60.30 12 2 ASN A 342 ? ? -35.72 -36.45 13 2 ASP A 364 ? ? -36.91 141.49 14 3 ARG A 318 ? ? -37.97 -32.89 15 3 CYS A 360 ? ? -46.36 100.42 16 3 SER A 369 ? ? -47.88 158.48 17 4 MET A 293 ? ? -49.44 -71.14 18 4 ARG A 318 ? ? -39.22 -33.67 19 4 GLU A 347 ? ? -39.86 -34.99 20 4 ARG A 350 ? ? -37.77 -28.30 21 4 TYR A 357 ? ? 36.75 53.47 22 5 ARG A 318 ? ? -34.87 -39.66 23 5 CYS A 360 ? ? -102.10 41.32 24 6 PRO A 274 ? ? -69.74 -174.47 25 6 PRO A 280 ? ? -69.79 -170.71 26 6 GLU A 294 ? ? -46.87 -72.17 27 6 ASP A 306 ? ? -38.42 129.85 28 6 ARG A 310 ? ? 35.82 53.30 29 6 ARG A 318 ? ? -39.36 -30.87 30 6 ILE A 338 ? ? -74.29 -71.40 31 6 GLU A 347 ? ? -54.72 -70.57 32 6 TYR A 357 ? ? -44.61 152.68 33 6 LYS A 358 ? ? -39.61 126.83 34 6 SER A 365 ? ? -94.73 -62.40 35 7 PRO A 274 ? ? -69.78 -174.01 36 7 ASP A 302 ? ? -47.78 -73.27 37 7 ARG A 318 ? ? -36.56 -34.37 38 7 GLU A 347 ? ? -67.63 -70.41 39 7 ARG A 359 ? ? -171.46 115.92 40 7 SER A 368 ? ? -59.15 100.21 41 8 PRO A 280 ? ? -69.72 -174.06 42 8 GLU A 283 ? ? -36.44 -33.26 43 8 LEU A 296 ? ? -38.60 -38.55 44 8 ASP A 302 ? ? -62.99 -71.91 45 8 ARG A 310 ? ? 73.59 34.67 46 8 ARG A 318 ? ? -36.43 -39.10 47 8 LEU A 325 ? ? -93.31 -60.06 48 8 GLU A 356 ? ? -61.27 83.90 49 8 TYR A 357 ? ? -40.95 109.25 50 8 PRO A 367 ? ? -69.80 89.80 51 9 SER A 272 ? ? -62.72 97.36 52 9 PRO A 280 ? ? -69.73 -178.59 53 9 GLU A 294 ? ? -52.29 -72.56 54 9 TYR A 303 ? ? 37.56 28.28 55 9 ASP A 320 ? ? -60.96 -70.51 56 9 ASN A 355 ? ? -37.33 -28.53 57 9 SER A 365 ? ? 39.10 41.76 58 10 SER A 272 ? ? -173.77 132.70 59 10 MET A 293 ? ? -52.53 -71.94 60 10 HIS A 305 ? ? -86.34 -71.11 61 10 ASP A 306 ? ? -44.88 103.13 62 10 PHE A 349 ? ? -49.56 -70.85 63 10 ASN A 355 ? ? -37.55 -39.03 64 10 ASP A 364 ? ? -93.69 49.85 65 11 SER A 271 ? ? -40.13 100.13 66 11 PRO A 280 ? ? -69.75 -170.29 67 11 ARG A 310 ? ? 37.08 48.62 68 11 ARG A 318 ? ? -34.28 -70.91 69 11 ASP A 320 ? ? -66.02 -70.48 70 11 SER A 340 ? ? -38.80 -39.27 71 11 ASN A 342 ? ? -36.50 -37.67 72 11 ARG A 350 ? ? -37.73 -28.86 73 11 SER A 368 ? ? -37.04 104.98 74 12 SER A 268 ? ? -172.55 147.34 75 12 PRO A 274 ? ? -69.76 93.79 76 12 LEU A 296 ? ? -37.93 -33.86 77 12 TYR A 303 ? ? -82.86 44.14 78 12 SER A 309 ? ? -48.12 104.14 79 12 PHE A 335 ? ? -47.41 -19.85 80 12 ASN A 355 ? ? -39.26 -39.80 81 12 ASP A 364 ? ? -53.64 97.31 82 12 SER A 365 ? ? 73.05 41.18 83 12 SER A 369 ? ? -108.48 43.17 84 13 PRO A 274 ? ? -69.73 98.97 85 13 PRO A 280 ? ? -69.68 -166.73 86 13 ASP A 306 ? ? -43.20 153.22 87 13 VAL A 308 ? ? -36.86 -30.85 88 13 LYS A 326 ? ? -39.57 -34.15 89 13 TYR A 357 ? ? 72.64 45.28 90 13 PRO A 367 ? ? -69.72 95.63 91 13 SER A 369 ? ? 36.19 41.74 92 14 SER A 268 ? ? 38.70 48.51 93 14 SER A 271 ? ? -43.00 156.04 94 14 PRO A 280 ? ? -69.74 -174.06 95 14 MET A 293 ? ? -55.51 -70.25 96 14 ASP A 302 ? ? -99.29 -64.30 97 14 HIS A 305 ? ? -35.76 -36.16 98 14 SER A 309 ? ? -52.03 86.61 99 14 ARG A 310 ? ? 73.84 48.70 100 14 GLU A 312 ? ? -39.29 -34.10 101 14 ILE A 317 ? ? -48.12 -71.36 102 14 ASN A 355 ? ? -52.84 85.04 103 14 ASP A 361 ? ? -37.14 140.11 104 14 ASP A 364 ? ? -49.51 171.68 105 14 PRO A 367 ? ? -69.75 87.07 106 15 PRO A 274 ? ? -69.77 95.36 107 15 GLU A 283 ? ? -39.86 -27.00 108 15 LYS A 307 ? ? -90.82 -67.73 109 15 ARG A 318 ? ? -39.75 -35.70 110 15 LEU A 325 ? ? -91.62 -62.22 111 15 ARG A 350 ? ? -36.33 -32.28 112 15 TYR A 357 ? ? -127.08 -56.72 113 15 ARG A 363 ? ? -82.67 44.57 114 16 SER A 268 ? ? -171.50 121.99 115 16 SER A 272 ? ? -171.09 148.71 116 16 PRO A 274 ? ? -69.72 1.22 117 16 PRO A 280 ? ? -69.77 -176.02 118 16 GLU A 294 ? ? -39.75 -72.09 119 16 ASP A 302 ? ? -58.74 -74.87 120 16 PHE A 349 ? ? -51.94 -70.89 121 16 GLU A 356 ? ? -114.83 56.61 122 16 LYS A 358 ? ? -63.70 93.49 123 16 SER A 368 ? ? -90.89 41.19 124 17 PRO A 280 ? ? -69.72 -176.57 125 17 LEU A 296 ? ? -36.03 -37.88 126 17 HIS A 305 ? ? -50.26 -71.81 127 17 ARG A 318 ? ? -36.82 -33.89 128 17 ARG A 350 ? ? -49.02 -19.53 129 17 ARG A 363 ? ? -35.54 101.27 130 17 SER A 368 ? ? -35.55 122.71 131 18 SER A 268 ? ? -173.13 149.47 132 18 PRO A 274 ? ? -69.74 2.16 133 18 GLU A 283 ? ? -38.78 -35.29 134 18 GLU A 294 ? ? -37.53 -73.12 135 18 TYR A 303 ? ? -89.39 48.60 136 18 GLU A 312 ? ? -39.29 -29.03 137 18 ARG A 318 ? ? -34.41 -38.41 138 18 LEU A 325 ? ? -94.22 -65.17 139 18 LYS A 326 ? ? -39.93 -29.35 140 18 TYR A 357 ? ? -37.17 142.24 141 18 LYS A 358 ? ? -38.17 149.80 142 18 ARG A 363 ? ? -84.92 41.71 143 18 PRO A 367 ? ? -69.74 2.73 144 18 SER A 368 ? ? -34.63 124.86 145 18 SER A 369 ? ? -37.63 144.80 146 19 GLU A 304 ? ? -37.36 -34.72 147 19 ARG A 318 ? ? -38.09 -35.84 148 19 ASN A 355 ? ? -95.30 -63.50 149 19 GLU A 356 ? ? -63.77 80.36 150 19 TYR A 357 ? ? -97.17 56.77 151 19 CYS A 360 ? ? -39.63 154.79 152 20 LEU A 325 ? ? -93.20 -63.03 153 20 GLU A 356 ? ? -32.58 92.02 154 20 TYR A 357 ? ? -38.22 151.74 #