data_1WHX # _entry.id 1WHX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1WHX pdb_00001whx 10.2210/pdb1whx/pdb RCSB RCSB023596 ? ? WWPDB D_1000023596 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id mmt007011210.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1WHX _pdbx_database_status.recvd_initial_deposition_date 2004-05-28 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nagata, T.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Terada, T.' 5 'Shirouzu, M.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of the second RNA binding domain from hypothetical protein BAB23448' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nagata, T.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Terada, T.' 5 ? primary 'Shirouzu, M.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'hypothetical protein RIKEN CDNA 1200009A02' _entity.formula_weight 11830.350 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'RNA recognition motif' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'hypothetical protein BAB23448' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGRSKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEW APIGVFGAAPQKKDSQHEQPAEKAESGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGRSKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEW APIGVFGAAPQKKDSQHEQPAEKAESGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier mmt007011210.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 ARG n 1 9 SER n 1 10 LYS n 1 11 THR n 1 12 VAL n 1 13 ILE n 1 14 LEU n 1 15 ALA n 1 16 LYS n 1 17 ASN n 1 18 LEU n 1 19 PRO n 1 20 ALA n 1 21 GLY n 1 22 THR n 1 23 LEU n 1 24 ALA n 1 25 ALA n 1 26 GLU n 1 27 ILE n 1 28 GLN n 1 29 GLU n 1 30 THR n 1 31 PHE n 1 32 SER n 1 33 ARG n 1 34 PHE n 1 35 GLY n 1 36 SER n 1 37 LEU n 1 38 GLY n 1 39 ARG n 1 40 VAL n 1 41 LEU n 1 42 LEU n 1 43 PRO n 1 44 GLU n 1 45 GLY n 1 46 GLY n 1 47 ILE n 1 48 THR n 1 49 ALA n 1 50 ILE n 1 51 VAL n 1 52 GLU n 1 53 PHE n 1 54 LEU n 1 55 GLU n 1 56 PRO n 1 57 LEU n 1 58 GLU n 1 59 ALA n 1 60 ARG n 1 61 LYS n 1 62 ALA n 1 63 PHE n 1 64 ARG n 1 65 HIS n 1 66 LEU n 1 67 ALA n 1 68 TYR n 1 69 SER n 1 70 LYS n 1 71 PHE n 1 72 HIS n 1 73 HIS n 1 74 VAL n 1 75 PRO n 1 76 LEU n 1 77 TYR n 1 78 LEU n 1 79 GLU n 1 80 TRP n 1 81 ALA n 1 82 PRO n 1 83 ILE n 1 84 GLY n 1 85 VAL n 1 86 PHE n 1 87 GLY n 1 88 ALA n 1 89 ALA n 1 90 PRO n 1 91 GLN n 1 92 LYS n 1 93 LYS n 1 94 ASP n 1 95 SER n 1 96 GLN n 1 97 HIS n 1 98 GLU n 1 99 GLN n 1 100 PRO n 1 101 ALA n 1 102 GLU n 1 103 LYS n 1 104 ALA n 1 105 GLU n 1 106 SER n 1 107 GLY n 1 108 PRO n 1 109 SER n 1 110 SER n 1 111 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene 'RIKEN CDNA 1200009A02' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P030811-91 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'CELL-FREE PROTEIN SYNTHESIS' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RBM19_MOUSE _struct_ref.pdbx_db_accession Q8R3C6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;RSKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIGVFG AAPQKKDSQHEQPAEKAE ; _struct_ref.pdbx_align_begin 219 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1WHX _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 105 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8R3C6 _struct_ref_seq.db_align_beg 219 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 316 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 219 _struct_ref_seq.pdbx_auth_seq_align_end 316 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1WHX GLY A 1 ? UNP Q8R3C6 ? ? 'cloning artifact' 212 1 1 1WHX SER A 2 ? UNP Q8R3C6 ? ? 'cloning artifact' 213 2 1 1WHX SER A 3 ? UNP Q8R3C6 ? ? 'cloning artifact' 214 3 1 1WHX GLY A 4 ? UNP Q8R3C6 ? ? 'cloning artifact' 215 4 1 1WHX SER A 5 ? UNP Q8R3C6 ? ? 'cloning artifact' 216 5 1 1WHX SER A 6 ? UNP Q8R3C6 ? ? 'cloning artifact' 217 6 1 1WHX GLY A 7 ? UNP Q8R3C6 ? ? 'cloning artifact' 218 7 1 1WHX SER A 106 ? UNP Q8R3C6 ? ? 'cloning artifact' 317 8 1 1WHX GLY A 107 ? UNP Q8R3C6 ? ? 'cloning artifact' 318 9 1 1WHX PRO A 108 ? UNP Q8R3C6 ? ? 'cloning artifact' 319 10 1 1WHX SER A 109 ? UNP Q8R3C6 ? ? 'cloning artifact' 320 11 1 1WHX SER A 110 ? UNP Q8R3C6 ? ? 'cloning artifact' 321 12 1 1WHX GLY A 111 ? UNP Q8R3C6 ? ? 'cloning artifact' 322 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 3D_13C-separated_NOESY 2 1 1 3D_15N-separated_NOESY # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 6.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 100mM _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.08mM PROTEIN U-15N, 13C; 20mM phosphate buffer NA; 100mM NaCl; 1mM DTT; 0.02% NaN3; 90% H2O; 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.field_strength 800 # _pdbx_nmr_refine.entry_id 1WHX _pdbx_nmr_refine.method 'torsion angle dynamics, simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1WHX _pdbx_nmr_details.text 'The structure was determined using triple-resonance NMR spectroscopy.' # _pdbx_nmr_ensemble.entry_id 1WHX _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1WHX _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal NMRView 5.0.4 'data analysis' Johnson 1 CYANA 2.0 'structure solution' Guentert 2 NMRPipe 2.3 processing Delaglio 3 KUJIRA 0.901 'data analysis' 'Kobayashi, N.' 4 CYANA 2.0 refinement Guentert 5 # _exptl.entry_id 1WHX _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1WHX _struct.title 'Solution structure of the second RNA binding domain from hypothetical protein BAB23448' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1WHX _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text ;RNA recognition motif, RRM, RNA binding domain, RBD, RNP, STRUCTURAL GENOMICS, RIKEN Structural Genomics/Proteomics Initiative, RSGI, RNA BINDING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 24 ? SER A 32 ? ALA A 235 SER A 243 1 ? 9 HELX_P HELX_P2 2 PRO A 56 ? LEU A 66 ? PRO A 267 LEU A 277 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 37 ? LEU A 41 ? LEU A 248 LEU A 252 A 2 ALA A 49 ? PHE A 53 ? ALA A 260 PHE A 264 A 3 VAL A 12 ? LYS A 16 ? VAL A 223 LYS A 227 A 4 TYR A 77 ? TRP A 80 ? TYR A 288 TRP A 291 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 41 ? N LEU A 252 O ILE A 50 ? O ILE A 261 A 2 3 O VAL A 51 ? O VAL A 262 N ILE A 13 ? N ILE A 224 A 3 4 N LEU A 14 ? N LEU A 225 O GLU A 79 ? O GLU A 290 # _database_PDB_matrix.entry_id 1WHX _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1WHX _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 212 212 GLY GLY A . n A 1 2 SER 2 213 213 SER SER A . n A 1 3 SER 3 214 214 SER SER A . n A 1 4 GLY 4 215 215 GLY GLY A . n A 1 5 SER 5 216 216 SER SER A . n A 1 6 SER 6 217 217 SER SER A . n A 1 7 GLY 7 218 218 GLY GLY A . n A 1 8 ARG 8 219 219 ARG ARG A . n A 1 9 SER 9 220 220 SER SER A . n A 1 10 LYS 10 221 221 LYS LYS A . n A 1 11 THR 11 222 222 THR THR A . n A 1 12 VAL 12 223 223 VAL VAL A . n A 1 13 ILE 13 224 224 ILE ILE A . n A 1 14 LEU 14 225 225 LEU LEU A . n A 1 15 ALA 15 226 226 ALA ALA A . n A 1 16 LYS 16 227 227 LYS LYS A . n A 1 17 ASN 17 228 228 ASN ASN A . n A 1 18 LEU 18 229 229 LEU LEU A . n A 1 19 PRO 19 230 230 PRO PRO A . n A 1 20 ALA 20 231 231 ALA ALA A . n A 1 21 GLY 21 232 232 GLY GLY A . n A 1 22 THR 22 233 233 THR THR A . n A 1 23 LEU 23 234 234 LEU LEU A . n A 1 24 ALA 24 235 235 ALA ALA A . n A 1 25 ALA 25 236 236 ALA ALA A . n A 1 26 GLU 26 237 237 GLU GLU A . n A 1 27 ILE 27 238 238 ILE ILE A . n A 1 28 GLN 28 239 239 GLN GLN A . n A 1 29 GLU 29 240 240 GLU GLU A . n A 1 30 THR 30 241 241 THR THR A . n A 1 31 PHE 31 242 242 PHE PHE A . n A 1 32 SER 32 243 243 SER SER A . n A 1 33 ARG 33 244 244 ARG ARG A . n A 1 34 PHE 34 245 245 PHE PHE A . n A 1 35 GLY 35 246 246 GLY GLY A . n A 1 36 SER 36 247 247 SER SER A . n A 1 37 LEU 37 248 248 LEU LEU A . n A 1 38 GLY 38 249 249 GLY GLY A . n A 1 39 ARG 39 250 250 ARG ARG A . n A 1 40 VAL 40 251 251 VAL VAL A . n A 1 41 LEU 41 252 252 LEU LEU A . n A 1 42 LEU 42 253 253 LEU LEU A . n A 1 43 PRO 43 254 254 PRO PRO A . n A 1 44 GLU 44 255 255 GLU GLU A . n A 1 45 GLY 45 256 256 GLY GLY A . n A 1 46 GLY 46 257 257 GLY GLY A . n A 1 47 ILE 47 258 258 ILE ILE A . n A 1 48 THR 48 259 259 THR THR A . n A 1 49 ALA 49 260 260 ALA ALA A . n A 1 50 ILE 50 261 261 ILE ILE A . n A 1 51 VAL 51 262 262 VAL VAL A . n A 1 52 GLU 52 263 263 GLU GLU A . n A 1 53 PHE 53 264 264 PHE PHE A . n A 1 54 LEU 54 265 265 LEU LEU A . n A 1 55 GLU 55 266 266 GLU GLU A . n A 1 56 PRO 56 267 267 PRO PRO A . n A 1 57 LEU 57 268 268 LEU LEU A . n A 1 58 GLU 58 269 269 GLU GLU A . n A 1 59 ALA 59 270 270 ALA ALA A . n A 1 60 ARG 60 271 271 ARG ARG A . n A 1 61 LYS 61 272 272 LYS LYS A . n A 1 62 ALA 62 273 273 ALA ALA A . n A 1 63 PHE 63 274 274 PHE PHE A . n A 1 64 ARG 64 275 275 ARG ARG A . n A 1 65 HIS 65 276 276 HIS HIS A . n A 1 66 LEU 66 277 277 LEU LEU A . n A 1 67 ALA 67 278 278 ALA ALA A . n A 1 68 TYR 68 279 279 TYR TYR A . n A 1 69 SER 69 280 280 SER SER A . n A 1 70 LYS 70 281 281 LYS LYS A . n A 1 71 PHE 71 282 282 PHE PHE A . n A 1 72 HIS 72 283 283 HIS HIS A . n A 1 73 HIS 73 284 284 HIS HIS A . n A 1 74 VAL 74 285 285 VAL VAL A . n A 1 75 PRO 75 286 286 PRO PRO A . n A 1 76 LEU 76 287 287 LEU LEU A . n A 1 77 TYR 77 288 288 TYR TYR A . n A 1 78 LEU 78 289 289 LEU LEU A . n A 1 79 GLU 79 290 290 GLU GLU A . n A 1 80 TRP 80 291 291 TRP TRP A . n A 1 81 ALA 81 292 292 ALA ALA A . n A 1 82 PRO 82 293 293 PRO PRO A . n A 1 83 ILE 83 294 294 ILE ILE A . n A 1 84 GLY 84 295 295 GLY GLY A . n A 1 85 VAL 85 296 296 VAL VAL A . n A 1 86 PHE 86 297 297 PHE PHE A . n A 1 87 GLY 87 298 298 GLY GLY A . n A 1 88 ALA 88 299 299 ALA ALA A . n A 1 89 ALA 89 300 300 ALA ALA A . n A 1 90 PRO 90 301 301 PRO PRO A . n A 1 91 GLN 91 302 302 GLN GLN A . n A 1 92 LYS 92 303 303 LYS LYS A . n A 1 93 LYS 93 304 304 LYS LYS A . n A 1 94 ASP 94 305 305 ASP ASP A . n A 1 95 SER 95 306 306 SER SER A . n A 1 96 GLN 96 307 307 GLN GLN A . n A 1 97 HIS 97 308 308 HIS HIS A . n A 1 98 GLU 98 309 309 GLU GLU A . n A 1 99 GLN 99 310 310 GLN GLN A . n A 1 100 PRO 100 311 311 PRO PRO A . n A 1 101 ALA 101 312 312 ALA ALA A . n A 1 102 GLU 102 313 313 GLU GLU A . n A 1 103 LYS 103 314 314 LYS LYS A . n A 1 104 ALA 104 315 315 ALA ALA A . n A 1 105 GLU 105 316 316 GLU GLU A . n A 1 106 SER 106 317 317 SER SER A . n A 1 107 GLY 107 318 318 GLY GLY A . n A 1 108 PRO 108 319 319 PRO PRO A . n A 1 109 SER 109 320 320 SER SER A . n A 1 110 SER 110 321 321 SER SER A . n A 1 111 GLY 111 322 322 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-11-28 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 228 ? ? 70.75 52.91 2 1 HIS A 276 ? ? -57.28 -70.98 3 1 PHE A 282 ? ? -69.63 -73.74 4 1 HIS A 283 ? ? -110.41 -71.76 5 1 GLU A 309 ? ? -44.12 151.45 6 1 SER A 317 ? ? -38.55 120.61 7 1 PRO A 319 ? ? -69.78 -178.86 8 2 SER A 213 ? ? -101.70 -60.28 9 2 ASN A 228 ? ? 72.65 52.85 10 2 HIS A 283 ? ? -123.94 -75.53 11 2 PHE A 297 ? ? -96.06 -62.72 12 2 PRO A 301 ? ? -69.79 -175.59 13 2 GLN A 302 ? ? -109.68 45.95 14 2 GLU A 309 ? ? -34.69 119.94 15 2 PRO A 319 ? ? -69.76 -174.71 16 3 SER A 214 ? ? -95.79 -66.63 17 3 ASN A 228 ? ? 74.33 53.97 18 3 THR A 233 ? ? -46.62 155.67 19 3 PHE A 282 ? ? -69.84 -74.96 20 3 HIS A 283 ? ? -116.02 -70.17 21 3 TRP A 291 ? ? -37.48 150.87 22 3 PRO A 293 ? ? -69.71 -174.87 23 3 PRO A 301 ? ? -69.77 -172.43 24 3 GLN A 302 ? ? -115.22 74.54 25 3 GLN A 307 ? ? -38.89 -31.61 26 3 SER A 317 ? ? 34.49 43.79 27 3 PRO A 319 ? ? -69.78 -175.03 28 4 THR A 241 ? ? -39.54 -38.97 29 4 PHE A 282 ? ? -78.72 -73.34 30 4 HIS A 283 ? ? -118.29 -71.99 31 4 TRP A 291 ? ? -49.49 150.79 32 4 GLU A 309 ? ? -36.03 127.28 33 4 SER A 317 ? ? -44.04 103.89 34 4 SER A 321 ? ? -34.91 147.42 35 5 PHE A 282 ? ? -70.55 -72.25 36 5 HIS A 283 ? ? -112.78 -74.92 37 5 PRO A 301 ? ? -69.78 -169.19 38 5 HIS A 308 ? ? -39.92 -32.94 39 5 GLU A 309 ? ? -38.63 123.24 40 5 GLN A 310 ? ? -33.96 96.96 41 5 SER A 317 ? ? -34.88 124.52 42 6 SER A 220 ? ? -44.57 154.32 43 6 THR A 233 ? ? -44.70 163.41 44 6 ALA A 235 ? ? -37.59 -36.78 45 6 HIS A 276 ? ? -63.13 -72.10 46 6 TYR A 279 ? ? 70.83 32.30 47 6 PHE A 282 ? ? -78.55 -72.67 48 6 HIS A 283 ? ? -108.46 -73.05 49 6 TRP A 291 ? ? -38.82 146.32 50 6 PRO A 293 ? ? -69.75 -174.63 51 6 ALA A 299 ? ? -174.59 149.54 52 6 GLN A 302 ? ? -119.93 67.28 53 6 HIS A 308 ? ? -39.16 -39.87 54 6 GLU A 309 ? ? -35.09 100.64 55 6 SER A 317 ? ? -38.00 132.83 56 6 PRO A 319 ? ? -69.79 -179.19 57 7 SER A 220 ? ? -45.25 156.91 58 7 ASN A 228 ? ? 70.49 52.66 59 7 THR A 233 ? ? -41.82 159.49 60 7 HIS A 283 ? ? -121.89 -73.17 61 7 PRO A 293 ? ? -69.72 -176.74 62 7 GLU A 309 ? ? -39.21 158.18 63 7 SER A 317 ? ? -35.56 129.11 64 7 SER A 321 ? ? -35.11 146.78 65 8 THR A 233 ? ? -46.87 159.68 66 8 SER A 247 ? ? -46.51 166.20 67 8 HIS A 283 ? ? -119.93 -72.48 68 8 PRO A 293 ? ? -69.78 -179.52 69 8 PHE A 297 ? ? -96.66 -62.15 70 8 ALA A 300 ? ? -38.73 143.68 71 8 GLN A 302 ? ? -101.27 41.99 72 8 GLU A 309 ? ? -34.49 94.89 73 8 SER A 317 ? ? -38.06 122.58 74 8 SER A 321 ? ? -44.25 106.97 75 9 SER A 220 ? ? -42.26 162.14 76 9 ASN A 228 ? ? 71.45 52.96 77 9 THR A 233 ? ? -45.69 163.96 78 9 ALA A 278 ? ? -37.02 132.39 79 9 HIS A 283 ? ? -118.04 -74.84 80 9 PRO A 293 ? ? -69.78 -172.48 81 9 SER A 317 ? ? -34.97 122.98 82 10 ASN A 228 ? ? 74.90 54.82 83 10 THR A 233 ? ? -48.71 163.41 84 10 HIS A 283 ? ? -121.43 -72.95 85 10 TRP A 291 ? ? -38.82 153.78 86 10 PRO A 293 ? ? -69.74 -171.02 87 10 PRO A 301 ? ? -69.76 -175.05 88 10 HIS A 308 ? ? -37.09 -29.33 89 10 GLU A 309 ? ? -35.03 105.99 90 10 SER A 317 ? ? -40.33 103.76 91 11 ASN A 228 ? ? 73.99 53.06 92 11 SER A 247 ? ? -47.22 150.98 93 11 HIS A 276 ? ? -70.89 -70.32 94 11 HIS A 283 ? ? -115.53 -73.65 95 11 PRO A 293 ? ? -69.74 -172.11 96 11 SER A 317 ? ? 71.69 41.45 97 12 ASN A 228 ? ? 71.94 52.90 98 12 THR A 233 ? ? -43.35 163.81 99 12 SER A 247 ? ? -46.34 155.25 100 12 ALA A 278 ? ? -36.79 136.26 101 12 PHE A 282 ? ? -77.54 -74.97 102 12 HIS A 283 ? ? -108.67 -72.62 103 12 PRO A 293 ? ? -69.77 -174.76 104 12 ALA A 300 ? ? -174.95 143.89 105 12 PRO A 301 ? ? -69.65 85.96 106 12 HIS A 308 ? ? -36.97 -38.38 107 12 SER A 317 ? ? -34.66 110.76 108 13 ASN A 228 ? ? 73.62 49.30 109 13 HIS A 283 ? ? -120.90 -60.54 110 13 HIS A 284 ? ? -134.98 -32.97 111 13 PRO A 293 ? ? -69.74 -176.32 112 13 GLN A 307 ? ? -39.43 -38.29 113 13 GLU A 309 ? ? -34.54 139.52 114 13 SER A 317 ? ? -34.53 123.73 115 14 ASN A 228 ? ? 73.97 52.50 116 14 THR A 233 ? ? -41.56 164.13 117 14 TYR A 279 ? ? 73.12 37.31 118 14 HIS A 283 ? ? -122.28 -74.89 119 14 TRP A 291 ? ? -44.79 150.21 120 14 PRO A 293 ? ? -69.78 -170.40 121 14 GLN A 302 ? ? -106.34 40.53 122 14 GLN A 307 ? ? -39.73 -33.56 123 14 HIS A 308 ? ? -36.80 -35.69 124 14 GLU A 309 ? ? -34.45 102.36 125 14 SER A 317 ? ? -38.14 123.15 126 15 SER A 220 ? ? -44.62 158.51 127 15 THR A 233 ? ? -43.64 158.42 128 15 THR A 259 ? ? -44.42 151.47 129 15 HIS A 276 ? ? -48.93 -73.74 130 15 ALA A 278 ? ? -36.38 147.43 131 15 HIS A 283 ? ? -123.02 -75.51 132 15 PRO A 293 ? ? -69.83 -174.15 133 15 PHE A 297 ? ? -95.98 -62.99 134 15 HIS A 308 ? ? -36.90 -35.65 135 15 GLU A 309 ? ? -34.47 102.12 136 15 SER A 317 ? ? -34.52 121.11 137 15 PRO A 319 ? ? -69.76 -173.00 138 16 SER A 220 ? ? -45.82 151.25 139 16 ASN A 228 ? ? 72.90 47.20 140 16 THR A 233 ? ? -49.08 164.24 141 16 HIS A 276 ? ? -65.12 -72.62 142 16 ALA A 278 ? ? -39.65 143.55 143 16 PHE A 282 ? ? -84.23 -73.62 144 16 PRO A 293 ? ? -69.75 -175.45 145 16 ALA A 299 ? ? -175.01 138.87 146 16 ALA A 300 ? ? -173.78 140.62 147 16 PRO A 301 ? ? -69.75 -170.69 148 16 GLN A 302 ? ? -172.41 108.38 149 16 ASP A 305 ? ? -39.21 -25.84 150 16 GLN A 307 ? ? -39.48 -30.44 151 16 HIS A 308 ? ? -39.42 -38.76 152 16 GLU A 309 ? ? -36.31 103.02 153 16 SER A 317 ? ? -37.55 122.96 154 16 PRO A 319 ? ? -69.71 -173.15 155 17 THR A 233 ? ? -45.62 155.12 156 17 ALA A 278 ? ? -38.55 145.97 157 17 PHE A 282 ? ? -79.31 -71.40 158 17 HIS A 284 ? ? -131.48 -31.47 159 17 ILE A 294 ? ? -48.50 -19.25 160 17 VAL A 296 ? ? -39.03 -34.65 161 17 ALA A 300 ? ? -172.65 134.83 162 18 ASN A 228 ? ? 71.53 50.32 163 18 THR A 233 ? ? -40.35 160.65 164 18 ALA A 278 ? ? -36.60 148.24 165 18 PHE A 282 ? ? -67.57 -75.11 166 18 HIS A 284 ? ? -134.22 -32.61 167 18 TRP A 291 ? ? -47.70 152.01 168 18 GLN A 302 ? ? -99.49 43.95 169 18 GLU A 309 ? ? -34.55 107.24 170 18 PRO A 311 ? ? -69.72 -177.88 171 18 SER A 317 ? ? -34.93 114.59 172 19 ASN A 228 ? ? 71.25 50.35 173 19 THR A 233 ? ? -44.42 162.21 174 19 ALA A 278 ? ? -38.27 137.65 175 19 PHE A 282 ? ? -84.86 -72.61 176 19 HIS A 283 ? ? -110.70 -74.87 177 19 PRO A 301 ? ? -69.81 88.39 178 19 GLN A 302 ? ? -98.80 42.62 179 19 HIS A 308 ? ? -36.96 -39.53 180 19 GLU A 309 ? ? -34.45 100.07 181 19 SER A 317 ? ? -39.53 123.37 182 19 SER A 321 ? ? -171.15 147.84 183 20 ASN A 228 ? ? 70.74 48.87 184 20 THR A 233 ? ? -44.36 160.20 185 20 HIS A 283 ? ? -124.01 -76.08 186 20 PRO A 293 ? ? -69.81 -176.24 187 20 PRO A 301 ? ? -69.74 -172.60 188 20 GLU A 309 ? ? -39.63 150.29 #