HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 28-MAY-04 1WI6 TITLE SOLUTION STRUCTURE OF THE RNA BINDING DOMAIN FROM MOUSE HYPOTHETICAL TITLE 2 PROTEIN BAB23670 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN (RIKEN CDNA 1300006N24); COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RNA RECOGNITION MOTIF; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: RIKEN CDNA 1300006N24; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P031222-76; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS RNA RECOGNITION MOTIF, RRM, RNA BINDING DOMAIN, RBD, RNP, STRUCTURAL KEYWDS 2 GENOMICS, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 3 UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.SUZUKI,Y.MUTO,T.NAGATA,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 02-MAR-22 1WI6 1 REMARK SEQADV SHEET REVDAT 2 24-FEB-09 1WI6 1 VERSN REVDAT 1 07-JUN-05 1WI6 0 JRNL AUTH S.SUZUKI,Y.MUTO,T.NAGATA,M.INOUE,T.KIGAWA,T.TERADA, JRNL AUTH 2 M.SHIROUZU,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE RNA BINDING DOMAIN FROM MOUSE JRNL TITL 2 HYPOTHETICAL PROTEIN BAB23670 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUENTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WI6 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-JUN-04. REMARK 100 THE DEPOSITION ID IS D_1000023605. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 100MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.2MM 13C/15N-PROTEIN 20MM D REMARK 210 -TRIS-HCL; 100MM NACL; 1MM D-DTT; REMARK 210 0.02% NAN3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 2.3, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.901, CYANA 2.0.17, REMARK 210 OLIVIA 1.9.12 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 2 LEU A 109 -71.76 -72.20 REMARK 500 2 GLN A 123 33.04 34.66 REMARK 500 2 ASP A 139 49.17 -95.69 REMARK 500 2 PRO A 146 0.15 -69.70 REMARK 500 3 SER A 63 136.38 -170.27 REMARK 500 3 GLN A 123 25.00 43.66 REMARK 500 3 ARG A 127 36.82 38.95 REMARK 500 3 LEU A 141 121.09 -172.51 REMARK 500 3 PRO A 146 1.67 -69.74 REMARK 500 3 SER A 147 100.14 -34.28 REMARK 500 4 GLN A 123 25.69 43.75 REMARK 500 4 LEU A 141 145.66 -172.03 REMARK 500 4 CYS A 143 39.88 -89.19 REMARK 500 5 SER A 67 76.06 -105.00 REMARK 500 5 VAL A 78 108.74 -59.61 REMARK 500 5 LEU A 109 -71.70 -62.45 REMARK 500 5 GLN A 123 28.18 45.57 REMARK 500 5 ARG A 127 40.53 36.25 REMARK 500 6 GLN A 123 25.91 43.81 REMARK 500 6 THR A 138 89.62 -58.83 REMARK 500 6 SER A 144 165.68 -45.24 REMARK 500 6 PRO A 146 87.62 -69.77 REMARK 500 7 SER A 66 -50.60 -129.16 REMARK 500 7 PRO A 75 -173.46 -69.79 REMARK 500 7 VAL A 78 108.78 -57.14 REMARK 500 7 LEU A 109 -72.82 -64.30 REMARK 500 7 GLN A 123 35.20 33.89 REMARK 500 8 GLN A 123 27.73 42.04 REMARK 500 8 ARG A 127 42.38 36.72 REMARK 500 8 LEU A 142 41.93 -97.09 REMARK 500 9 SER A 67 -63.57 -105.12 REMARK 500 9 LEU A 109 -71.75 -68.77 REMARK 500 9 GLN A 123 26.72 47.19 REMARK 500 9 THR A 138 157.26 -44.73 REMARK 500 9 PRO A 146 93.46 -69.72 REMARK 500 10 VAL A 78 109.52 -46.18 REMARK 500 10 LEU A 109 -73.41 -73.70 REMARK 500 10 GLN A 123 24.99 42.29 REMARK 500 10 ARG A 127 41.39 39.55 REMARK 500 10 ASP A 139 46.22 39.26 REMARK 500 11 SER A 64 107.70 -52.31 REMARK 500 11 VAL A 78 105.80 -55.79 REMARK 500 11 LEU A 109 -72.13 -70.67 REMARK 500 11 GLN A 123 27.60 45.90 REMARK 500 11 ARG A 127 38.91 38.51 REMARK 500 11 PRO A 137 96.31 -69.81 REMARK 500 11 THR A 138 150.88 -37.70 REMARK 500 12 LEU A 109 -74.14 -58.49 REMARK 500 12 GLN A 123 26.04 46.17 REMARK 500 12 ARG A 127 38.80 38.80 REMARK 500 REMARK 500 THIS ENTRY HAS 74 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMIANTION METHOD: AUTHOR DETERMINED REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMT007006895 RELATED DB: TARGETDB DBREF 1WI6 A 69 143 UNP Q8C3Z1 Q8C3Z1_MOUSE 69 143 SEQADV 1WI6 GLY A 62 UNP Q8C3Z1 CLONING ARTIFACT SEQADV 1WI6 SER A 63 UNP Q8C3Z1 CLONING ARTIFACT SEQADV 1WI6 SER A 64 UNP Q8C3Z1 CLONING ARTIFACT SEQADV 1WI6 GLY A 65 UNP Q8C3Z1 CLONING ARTIFACT SEQADV 1WI6 SER A 66 UNP Q8C3Z1 CLONING ARTIFACT SEQADV 1WI6 SER A 67 UNP Q8C3Z1 CLONING ARTIFACT SEQADV 1WI6 GLY A 68 UNP Q8C3Z1 CLONING ARTIFACT SEQADV 1WI6 SER A 144 UNP Q8C3Z1 CLONING ARTIFACT SEQADV 1WI6 GLY A 145 UNP Q8C3Z1 CLONING ARTIFACT SEQADV 1WI6 PRO A 146 UNP Q8C3Z1 CLONING ARTIFACT SEQADV 1WI6 SER A 147 UNP Q8C3Z1 CLONING ARTIFACT SEQADV 1WI6 SER A 148 UNP Q8C3Z1 CLONING ARTIFACT SEQADV 1WI6 GLY A 149 UNP Q8C3Z1 CLONING ARTIFACT SEQRES 1 A 88 GLY SER SER GLY SER SER GLY ILE LEU ILE ARG GLY LEU SEQRES 2 A 88 PRO GLY ASP VAL THR ASN GLN GLU VAL HIS ASP LEU LEU SEQRES 3 A 88 SER ASP TYR GLU LEU LYS TYR CYS PHE VAL ASP LYS TYR SEQRES 4 A 88 LYS GLY THR ALA PHE VAL THR LEU LEU ASN GLY GLU GLN SEQRES 5 A 88 ALA GLU ALA ALA ILE ASN THR PHE HIS GLN SER ARG LEU SEQRES 6 A 88 ARG GLU ARG GLU LEU SER VAL GLN LEU GLN PRO THR ASP SEQRES 7 A 88 ALA LEU LEU CYS SER GLY PRO SER SER GLY HELIX 1 1 ASN A 80 LEU A 86 1 7 HELIX 2 2 GLU A 112 HIS A 122 1 11 SHEET 1 A 6 ILE A 69 ARG A 72 0 SHEET 2 A 6 TYR A 94 ASP A 98 0 SHEET 3 A 6 THR A 103 LEU A 108 0 SHEET 4 A 6 SER A 124 LEU A 126 0 SHEET 5 A 6 ARG A 129 LEU A 131 0 SHEET 6 A 6 SER A 132 LEU A 135 0 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1