HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 28-MAY-04 1WIA TITLE SOLUTION STRUCTURE OF MOUSE HYPOTHETICAL UBIQUITIN-LIKE PROTEIN TITLE 2 BAB25500 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL UBIQUITIN-LIKE PROTEIN (RIKEN CDNA COMPND 3 2010008E23); COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: UBIQUITIN-FOLD; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: RIKEN CDNA 2010008E23; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P030414-61; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS UBIQUITIN, 'STRUCTURAL GENOMICS, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 2 INITIATIVE, RSGI, STRUCTURAL GENOMICS, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,F.HAYASHI,T.TERADA,M.SHIROUZU, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 02-MAR-22 1WIA 1 REMARK SEQADV REVDAT 2 24-FEB-09 1WIA 1 VERSN REVDAT 1 28-NOV-04 1WIA 0 JRNL AUTH S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,F.HAYASHI,T.TERADA, JRNL AUTH 2 M.SHIROUZU,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF MOUSE HYPOTHETICAL UBIQUITIN-LIKE JRNL TITL 2 PROTEIN BAB25500 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUENTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WIA COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-JUN-04. REMARK 100 THE DEPOSITION ID IS D_1000023609. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 100MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.0MM 13C/15N-PROTEIN 20MM REMARK 210 PHOSPHATE BUFFER NA; 100MM NACL; REMARK 210 1MM D-DTT; 0.02% NAN3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 2.3, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.901, OLIVIA 1.9.12, REMARK 210 CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 183 172.74 -54.91 REMARK 500 1 PHE A 193 79.52 -109.71 REMARK 500 1 GLN A 196 39.32 -82.47 REMARK 500 1 MET A 200 85.48 -64.04 REMARK 500 1 ASP A 211 105.73 -48.49 REMARK 500 1 ARG A 214 109.11 -46.21 REMARK 500 1 PRO A 234 99.83 -69.76 REMARK 500 2 ASP A 183 -177.03 -64.89 REMARK 500 2 PHE A 193 75.99 -108.64 REMARK 500 2 GLN A 196 42.75 -90.67 REMARK 500 2 LEU A 209 46.02 -80.50 REMARK 500 2 GLN A 210 -73.82 -44.20 REMARK 500 2 ASP A 211 104.09 -45.08 REMARK 500 2 PRO A 212 3.04 -69.75 REMARK 500 2 ASN A 224 37.15 73.59 REMARK 500 2 VAL A 238 54.02 35.93 REMARK 500 3 ASP A 183 168.11 -47.38 REMARK 500 3 GLN A 196 39.43 -83.55 REMARK 500 3 GLN A 210 -71.88 -53.10 REMARK 500 3 ASP A 211 102.57 -42.23 REMARK 500 3 PRO A 212 3.02 -69.81 REMARK 500 3 ARG A 214 114.27 -39.98 REMARK 500 4 ASP A 183 172.86 -48.14 REMARK 500 4 PHE A 193 78.63 -112.66 REMARK 500 4 MET A 200 85.23 -52.60 REMARK 500 4 LEU A 209 47.01 -79.09 REMARK 500 4 GLN A 210 -73.22 -50.38 REMARK 500 4 ASP A 211 103.29 -43.79 REMARK 500 4 ASN A 224 33.68 72.44 REMARK 500 4 VAL A 238 50.99 34.49 REMARK 500 5 ASP A 183 169.26 -49.59 REMARK 500 5 PHE A 193 77.44 -111.84 REMARK 500 5 MET A 200 85.75 -52.14 REMARK 500 5 GLN A 210 -74.96 -34.33 REMARK 500 5 ASP A 211 100.12 -38.58 REMARK 500 5 PRO A 212 0.79 -69.71 REMARK 500 5 SER A 242 156.68 -42.84 REMARK 500 5 SER A 249 147.15 -36.54 REMARK 500 6 MET A 200 95.56 -55.97 REMARK 500 6 LEU A 209 48.63 -75.71 REMARK 500 6 GLN A 210 -73.09 -51.44 REMARK 500 6 ASP A 211 102.48 -42.31 REMARK 500 6 PRO A 212 3.09 -69.82 REMARK 500 6 ALA A 237 42.58 -104.58 REMARK 500 6 SER A 239 100.94 -56.11 REMARK 500 7 ASN A 171 34.47 -82.96 REMARK 500 7 PRO A 181 0.22 -69.82 REMARK 500 7 ASP A 183 161.67 -45.63 REMARK 500 7 PHE A 193 78.89 -109.98 REMARK 500 7 GLN A 196 35.86 -84.57 REMARK 500 REMARK 500 THIS ENTRY HAS 161 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 AUTHOR DETERMINATION METHOD: AUTHOR DETERMINED REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMK001003614.1 RELATED DB: TARGETDB DBREF 1WIA A 163 244 UNP Q9D8C5 Q9D8C5_MOUSE 163 244 SEQADV 1WIA GLY A 156 UNP Q9D8C5 CLONING ARTIFACT SEQADV 1WIA SER A 157 UNP Q9D8C5 CLONING ARTIFACT SEQADV 1WIA SER A 158 UNP Q9D8C5 CLONING ARTIFACT SEQADV 1WIA GLY A 159 UNP Q9D8C5 CLONING ARTIFACT SEQADV 1WIA SER A 160 UNP Q9D8C5 CLONING ARTIFACT SEQADV 1WIA SER A 161 UNP Q9D8C5 CLONING ARTIFACT SEQADV 1WIA GLY A 162 UNP Q9D8C5 CLONING ARTIFACT SEQADV 1WIA SER A 245 UNP Q9D8C5 CLONING ARTIFACT SEQADV 1WIA GLY A 246 UNP Q9D8C5 CLONING ARTIFACT SEQADV 1WIA PRO A 247 UNP Q9D8C5 CLONING ARTIFACT SEQADV 1WIA SER A 248 UNP Q9D8C5 CLONING ARTIFACT SEQADV 1WIA SER A 249 UNP Q9D8C5 CLONING ARTIFACT SEQADV 1WIA GLY A 250 UNP Q9D8C5 CLONING ARTIFACT SEQRES 1 A 95 GLY SER SER GLY SER SER GLY ILE ASN VAL ARG LEU LYS SEQRES 2 A 95 PHE LEU ASN ASP THR GLU GLU LEU ALA VAL ALA ARG PRO SEQRES 3 A 95 GLU ASP THR VAL GLY THR LEU LYS SER LYS TYR PHE PRO SEQRES 4 A 95 GLY GLN GLU SER GLN MET LYS LEU ILE TYR GLN GLY ARG SEQRES 5 A 95 LEU LEU GLN ASP PRO ALA ARG THR LEU SER SER LEU ASN SEQRES 6 A 95 ILE THR ASN ASN CYS VAL ILE HIS CYS HIS ARG SER PRO SEQRES 7 A 95 PRO GLY ALA ALA VAL SER GLY PRO SER ALA SER SER GLY SEQRES 8 A 95 PRO SER SER GLY HELIX 1 1 VAL A 185 TYR A 192 1 8 HELIX 2 2 SER A 217 LEU A 219 1 3 SHEET 1 A 5 THR A 173 ALA A 179 0 SHEET 2 A 5 ILE A 163 PHE A 169 -1 N LEU A 167 O GLU A 175 SHEET 3 A 5 CYS A 225 HIS A 230 1 O CYS A 225 N ARG A 166 SHEET 4 A 5 LYS A 201 TYR A 204 -1 N LYS A 201 O HIS A 230 SHEET 5 A 5 ARG A 207 LEU A 208 -1 O ARG A 207 N TYR A 204 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1