HEADER STRUCTURAL PROTEIN 27-JUN-04 1WLH TITLE MOLECULAR STRUCTURE OF THE ROD DOMAIN OF DICTYOSTELIUM FILAMIN CAVEAT 1WLH CHIRALITY ERROR AT THE CA CENTER OF ALA A 548. COMPND MOL_ID: 1; COMPND 2 MOLECULE: GELATION FACTOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: REPEAT 4,5,6 ROD DOMAIN; COMPND 5 SYNONYM: ACTIN BINDING PROTEIN 120, ABP-120, DDFILAMIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DICTYOSTELIUM DISCOIDEUM; SOURCE 3 ORGANISM_TAXID: 44689; SOURCE 4 GENE: ABPC; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PT7-7 , ECORI-SALI KEYWDS ABP-120, FILAMIN, IMMUNOGLOBULIN FOLD, ROD DOMAIN, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.M.POPOWICZ,R.MUELLER,A.A.NOEGEL,M.SCHLEICHER,R.HUBER,T.A.HOLAK REVDAT 5 25-OCT-23 1WLH 1 REMARK REVDAT 4 11-OCT-17 1WLH 1 REMARK REVDAT 3 24-FEB-09 1WLH 1 VERSN REVDAT 2 12-OCT-04 1WLH 1 JRNL REVDAT 1 05-OCT-04 1WLH 0 JRNL AUTH G.M.POPOWICZ,R.MUELLER,A.A.NOEGEL,M.SCHLEICHER,R.HUBER, JRNL AUTH 2 T.A.HOLAK JRNL TITL MOLECULAR STRUCTURE OF THE ROD DOMAIN OF DICTYOSTELIUM JRNL TITL 2 FILAMIN JRNL REF J.MOL.BIOL. V. 342 1637 2004 JRNL REFN ISSN 0022-2836 JRNL PMID 15364587 JRNL DOI 10.1016/J.JMB.2004.08.017 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 4.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 20708 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.258 REMARK 3 R VALUE (WORKING SET) : 0.257 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1104 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1512 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3960 REMARK 3 BIN FREE R VALUE SET COUNT : 81 REMARK 3 BIN FREE R VALUE : 0.4020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4537 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 88 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.73000 REMARK 3 B22 (A**2) : 1.34000 REMARK 3 B33 (A**2) : -5.66000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -3.25000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.109 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.345 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.254 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.060 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.892 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.893 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4703 ; 0.015 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 4035 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6398 ; 2.677 ; 1.956 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9497 ; 4.038 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 618 ; 8.612 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 698 ; 0.250 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5442 ; 0.018 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 872 ; 0.009 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1139 ; 0.269 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 4661 ; 0.305 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 2524 ; 0.131 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 103 ; 0.131 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 37 ; 0.590 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 50 ; 0.568 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.343 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3063 ; 0.647 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4935 ; 1.123 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1640 ; 1.353 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1463 ; 2.266 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1WLH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-JUN-04. REMARK 100 THE DEPOSITION ID IS D_1000023707. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-SEP-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97891 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MAR REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20708 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.02600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.12400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP, CNS REMARK 200 STARTING MODEL: 1KSR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MPD, CALCIUM CHLORIDE, SODIUM ACETATE, REMARK 280 PH 4.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.83500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 583 REMARK 465 ARG A 584 REMARK 465 THR A 585 REMARK 465 PRO B 547 REMARK 465 ALA B 548 REMARK 465 HIS B 583 REMARK 465 ARG B 584 REMARK 465 THR B 585 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 553 CG CD CE NZ REMARK 470 ASP B 607 CG OD1 OD2 REMARK 470 LYS B 641 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP A 580 O HOH A 5 1.44 REMARK 500 O GLY B 587 O GLY B 588 1.65 REMARK 500 CG PRO A 579 O HOH A 14 1.82 REMARK 500 OD2 ASP B 614 O HOH B 33 1.82 REMARK 500 O THR A 685 O ASP A 712 1.91 REMARK 500 C ASP A 580 O HOH A 5 2.05 REMARK 500 C THR A 685 O ASP A 712 2.06 REMARK 500 OD1 ASP A 709 OD1 ASN A 711 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 680 OE2 GLU B 621 1666 2.10 REMARK 500 OE2 GLU B 657 OD1 ASP B 699 2445 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASP A 578 C PRO A 579 N 0.115 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 551 C - N - CA ANGL. DEV. = -13.0 DEGREES REMARK 500 PRO A 551 C - N - CD ANGL. DEV. = 23.4 DEGREES REMARK 500 PRO A 551 CA - N - CD ANGL. DEV. = -9.8 DEGREES REMARK 500 LEU A 561 CB - CA - C ANGL. DEV. = 12.5 DEGREES REMARK 500 VAL A 577 CG1 - CB - CG2 ANGL. DEV. = -12.4 DEGREES REMARK 500 ASP A 578 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 578 N - CA - C ANGL. DEV. = -16.3 DEGREES REMARK 500 PRO A 579 C - N - CA ANGL. DEV. = -16.6 DEGREES REMARK 500 ASP A 580 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP A 586 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 PRO A 600 C - N - CD ANGL. DEV. = 14.4 DEGREES REMARK 500 PHE A 639 CB - CG - CD1 ANGL. DEV. = -4.6 DEGREES REMARK 500 PRO A 647 C - N - CD ANGL. DEV. = 15.9 DEGREES REMARK 500 PHE A 672 CB - CG - CD2 ANGL. DEV. = 4.6 DEGREES REMARK 500 PHE A 672 CB - CG - CD1 ANGL. DEV. = -6.4 DEGREES REMARK 500 ASP A 712 OD1 - CG - OD2 ANGL. DEV. = -11.9 DEGREES REMARK 500 ASP A 712 CB - CG - OD1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ASN A 824 O - C - N ANGL. DEV. = -11.2 DEGREES REMARK 500 ASP B 580 CB - CG - OD1 ANGL. DEV. = 7.9 DEGREES REMARK 500 ASP B 586 CB - CG - OD2 ANGL. DEV. = -7.6 DEGREES REMARK 500 ASP B 589 CB - CG - OD2 ANGL. DEV. = 7.8 DEGREES REMARK 500 MET B 605 CA - CB - CG ANGL. DEV. = -10.8 DEGREES REMARK 500 PHE B 617 O - C - N ANGL. DEV. = -10.9 DEGREES REMARK 500 PRO B 619 C - N - CA ANGL. DEV. = -12.5 DEGREES REMARK 500 PRO B 619 C - N - CD ANGL. DEV. = 21.9 DEGREES REMARK 500 PRO B 619 CA - N - CD ANGL. DEV. = -8.9 DEGREES REMARK 500 ALA B 622 CA - C - N ANGL. DEV. = -12.4 DEGREES REMARK 500 VAL B 847 CG1 - CB - CG2 ANGL. DEV. = -9.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 578 -61.19 -125.17 REMARK 500 ASP A 589 54.26 -146.62 REMARK 500 PRO A 598 39.83 -60.40 REMARK 500 VAL A 601 92.68 -161.15 REMARK 500 MET A 605 62.60 -103.05 REMARK 500 GLU A 621 95.67 52.89 REMARK 500 ASN A 637 15.35 -63.47 REMARK 500 LYS A 663 123.05 -170.29 REMARK 500 ASN A 667 10.05 -144.30 REMARK 500 VAL A 682 174.65 -44.33 REMARK 500 ASP A 686 -166.19 -110.59 REMARK 500 ASP A 709 92.38 -64.02 REMARK 500 ASN A 711 67.21 -65.34 REMARK 500 ASP A 712 -37.44 -146.51 REMARK 500 PRO A 737 103.19 -49.23 REMARK 500 LYS A 739 122.12 -39.48 REMARK 500 ASN A 740 40.15 38.29 REMARK 500 ILE A 743 132.65 -178.79 REMARK 500 ASP A 802 14.90 -155.21 REMARK 500 GLU A 829 103.59 -50.29 REMARK 500 PRO A 840 5.87 -60.29 REMARK 500 LYS A 842 -12.09 -49.28 REMARK 500 GLU A 846 28.10 -60.95 REMARK 500 PRO B 559 164.45 -47.05 REMARK 500 ASP B 580 84.94 46.31 REMARK 500 ASP B 607 165.43 -42.62 REMARK 500 ASP B 610 171.48 -46.68 REMARK 500 PHE B 617 109.22 -168.06 REMARK 500 LEU B 629 72.14 -160.81 REMARK 500 ASP B 632 16.46 58.24 REMARK 500 ASP B 634 93.01 -165.04 REMARK 500 ASN B 635 130.60 -37.76 REMARK 500 ASN B 637 36.22 -60.23 REMARK 500 VAL B 662 -65.89 -94.09 REMARK 500 PRO B 690 59.33 -92.44 REMARK 500 ASP B 699 43.98 -101.03 REMARK 500 ASN B 711 44.20 -83.24 REMARK 500 ALA B 721 74.78 -100.47 REMARK 500 PRO B 789 70.82 -68.32 REMARK 500 ILE B 793 147.48 -172.30 REMARK 500 ASN B 800 14.33 -64.00 REMARK 500 GLN B 801 47.28 32.96 REMARK 500 ASP B 802 22.28 -149.56 REMARK 500 ASN B 824 83.85 49.96 REMARK 500 LYS B 843 173.41 -45.29 REMARK 500 VAL B 847 95.08 -59.41 REMARK 500 SER B 849 140.67 -38.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 578 PRO A 579 134.40 REMARK 500 VAL A 606 ASP A 607 -144.84 REMARK 500 GLY A 609 ASP A 610 141.90 REMARK 500 ASP B 578 PRO B 579 51.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ASP A 712 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 PRO A 547 15.13 REMARK 500 PRO A 551 17.07 REMARK 500 GLU A 565 -11.46 REMARK 500 ASP A 578 -21.44 REMARK 500 VAL A 606 16.85 REMARK 500 THR A 644 10.22 REMARK 500 VAL A 662 10.06 REMARK 500 LYS A 842 -11.29 REMARK 500 ASP B 607 10.33 REMARK 500 THR B 612 12.56 REMARK 500 PHE B 617 19.28 REMARK 500 THR B 685 10.29 REMARK 500 ASN B 711 10.73 REMARK 500 ARG B 734 -18.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1KSR RELATED DB: PDB REMARK 900 REPEAT 4 NMR REMARK 900 RELATED ID: 1QFH RELATED DB: PDB REMARK 900 REPEATS 5-6 DBREF 1WLH A 547 857 UNP P13466 GELA_DICDI 547 857 DBREF 1WLH B 547 857 UNP P13466 GELA_DICDI 547 857 SEQRES 1 A 311 PRO ALA ALA ASP PRO GLU LYS SER TYR ALA GLU GLY PRO SEQRES 2 A 311 GLY LEU ASP GLY GLY GLU CYS PHE GLN PRO SER LYS PHE SEQRES 3 A 311 LYS ILE HIS ALA VAL ASP PRO ASP GLY VAL HIS ARG THR SEQRES 4 A 311 ASP GLY GLY ASP GLY PHE VAL VAL THR ILE GLU GLY PRO SEQRES 5 A 311 ALA PRO VAL ASP PRO VAL MET VAL ASP ASN GLY ASP GLY SEQRES 6 A 311 THR TYR ASP VAL GLU PHE GLU PRO LYS GLU ALA GLY ASP SEQRES 7 A 311 TYR VAL ILE ASN LEU THR LEU ASP GLY ASP ASN VAL ASN SEQRES 8 A 311 GLY PHE PRO LYS THR VAL THR VAL LYS PRO ALA PRO SER SEQRES 9 A 311 ALA GLU HIS SER TYR ALA GLU GLY GLU GLY LEU VAL LYS SEQRES 10 A 311 VAL PHE ASP ASN ALA PRO ALA GLU PHE THR ILE PHE ALA SEQRES 11 A 311 VAL ASP THR LYS GLY VAL ALA ARG THR ASP GLY GLY ASP SEQRES 12 A 311 PRO PHE GLU VAL ALA ILE ASN GLY PRO ASP GLY LEU VAL SEQRES 13 A 311 VAL ASP ALA LYS VAL THR ASP ASN ASN ASP GLY THR TYR SEQRES 14 A 311 GLY VAL VAL TYR ASP ALA PRO VAL GLU GLY ASN TYR ASN SEQRES 15 A 311 VAL ASN VAL THR LEU ARG GLY ASN PRO ILE LYS ASN MET SEQRES 16 A 311 PRO ILE ASP VAL LYS CYS ILE GLU GLY ALA ASN GLY GLU SEQRES 17 A 311 ASP SER SER PHE GLY SER PHE THR PHE THR VAL ALA ALA SEQRES 18 A 311 LYS ASN LYS LYS GLY GLU VAL LYS THR TYR GLY GLY ASP SEQRES 19 A 311 LYS PHE GLU VAL SER ILE THR GLY PRO ALA GLU GLU ILE SEQRES 20 A 311 THR LEU ASP ALA ILE ASP ASN GLN ASP GLY THR TYR THR SEQRES 21 A 311 ALA ALA TYR SER LEU VAL GLY ASN GLY ARG PHE SER THR SEQRES 22 A 311 GLY VAL LYS LEU ASN GLY LYS HIS ILE GLU GLY SER PRO SEQRES 23 A 311 PHE LYS GLN VAL LEU GLY ASN PRO GLY LYS LYS ASN PRO SEQRES 24 A 311 GLU VAL LYS SER PHE THR THR THR ARG THR ALA ASN SEQRES 1 B 311 PRO ALA ALA ASP PRO GLU LYS SER TYR ALA GLU GLY PRO SEQRES 2 B 311 GLY LEU ASP GLY GLY GLU CYS PHE GLN PRO SER LYS PHE SEQRES 3 B 311 LYS ILE HIS ALA VAL ASP PRO ASP GLY VAL HIS ARG THR SEQRES 4 B 311 ASP GLY GLY ASP GLY PHE VAL VAL THR ILE GLU GLY PRO SEQRES 5 B 311 ALA PRO VAL ASP PRO VAL MET VAL ASP ASN GLY ASP GLY SEQRES 6 B 311 THR TYR ASP VAL GLU PHE GLU PRO LYS GLU ALA GLY ASP SEQRES 7 B 311 TYR VAL ILE ASN LEU THR LEU ASP GLY ASP ASN VAL ASN SEQRES 8 B 311 GLY PHE PRO LYS THR VAL THR VAL LYS PRO ALA PRO SER SEQRES 9 B 311 ALA GLU HIS SER TYR ALA GLU GLY GLU GLY LEU VAL LYS SEQRES 10 B 311 VAL PHE ASP ASN ALA PRO ALA GLU PHE THR ILE PHE ALA SEQRES 11 B 311 VAL ASP THR LYS GLY VAL ALA ARG THR ASP GLY GLY ASP SEQRES 12 B 311 PRO PHE GLU VAL ALA ILE ASN GLY PRO ASP GLY LEU VAL SEQRES 13 B 311 VAL ASP ALA LYS VAL THR ASP ASN ASN ASP GLY THR TYR SEQRES 14 B 311 GLY VAL VAL TYR ASP ALA PRO VAL GLU GLY ASN TYR ASN SEQRES 15 B 311 VAL ASN VAL THR LEU ARG GLY ASN PRO ILE LYS ASN MET SEQRES 16 B 311 PRO ILE ASP VAL LYS CYS ILE GLU GLY ALA ASN GLY GLU SEQRES 17 B 311 ASP SER SER PHE GLY SER PHE THR PHE THR VAL ALA ALA SEQRES 18 B 311 LYS ASN LYS LYS GLY GLU VAL LYS THR TYR GLY GLY ASP SEQRES 19 B 311 LYS PHE GLU VAL SER ILE THR GLY PRO ALA GLU GLU ILE SEQRES 20 B 311 THR LEU ASP ALA ILE ASP ASN GLN ASP GLY THR TYR THR SEQRES 21 B 311 ALA ALA TYR SER LEU VAL GLY ASN GLY ARG PHE SER THR SEQRES 22 B 311 GLY VAL LYS LEU ASN GLY LYS HIS ILE GLU GLY SER PRO SEQRES 23 B 311 PHE LYS GLN VAL LEU GLY ASN PRO GLY LYS LYS ASN PRO SEQRES 24 B 311 GLU VAL LYS SER PHE THR THR THR ARG THR ALA ASN FORMUL 3 HOH *88(H2 O) HELIX 1 1 GLY A 658 VAL A 662 5 5 HELIX 2 2 ASN A 752 SER A 756 5 5 HELIX 3 3 GLY B 658 LEU B 661 5 4 HELIX 4 4 ASN B 752 SER B 756 5 5 SHEET 1 A 3 ALA A 556 GLU A 557 0 SHEET 2 A 3 SER A 570 HIS A 575 -1 O LYS A 573 N GLU A 557 SHEET 3 A 3 THR A 612 PHE A 617 -1 O PHE A 617 N SER A 570 SHEET 1 B 4 GLY A 564 GLU A 565 0 SHEET 2 B 4 LYS A 641 LYS A 646 1 O LYS A 646 N GLY A 564 SHEET 3 B 4 ASP A 624 LEU A 631 -1 N ILE A 627 O LYS A 641 SHEET 4 B 4 PHE A 591 GLU A 596 -1 N GLU A 596 O VAL A 626 SHEET 1 C 4 ALA A 656 GLU A 657 0 SHEET 2 C 4 ALA A 670 PHE A 675 -1 O THR A 673 N GLU A 657 SHEET 3 C 4 THR A 714 TYR A 719 -1 O TYR A 715 N ILE A 674 SHEET 4 C 4 LYS A 706 ASP A 709 -1 N THR A 708 O GLY A 716 SHEET 1 D 4 VAL A 664 PHE A 665 0 SHEET 2 D 4 ASP A 744 ILE A 748 1 O LYS A 746 N VAL A 664 SHEET 3 D 4 GLY A 725 LEU A 733 -1 N GLY A 725 O CYS A 747 SHEET 4 D 4 PHE A 691 ASN A 696 -1 N ASN A 696 O ASN A 728 SHEET 1 E 4 VAL A 664 PHE A 665 0 SHEET 2 E 4 ASP A 744 ILE A 748 1 O LYS A 746 N VAL A 664 SHEET 3 E 4 GLY A 725 LEU A 733 -1 N GLY A 725 O CYS A 747 SHEET 4 E 4 ASN A 736 PRO A 737 -1 O ASN A 736 N LEU A 733 SHEET 1 F 6 GLU A 792 ASP A 799 0 SHEET 2 F 6 THR A 804 VAL A 812 -1 O THR A 806 N ILE A 798 SHEET 3 F 6 SER A 757 ALA A 766 -1 N PHE A 761 O TYR A 809 SHEET 4 F 6 SER B 757 ALA B 766 -1 O GLY B 759 N THR A 764 SHEET 5 F 6 THR B 804 GLY B 813 -1 O TYR B 809 N PHE B 761 SHEET 6 F 6 ALA B 790 THR B 794 -1 N GLU B 791 O VAL B 812 SHEET 1 G 6 GLU A 792 ASP A 799 0 SHEET 2 G 6 THR A 804 VAL A 812 -1 O THR A 806 N ILE A 798 SHEET 3 G 6 SER A 757 ALA A 766 -1 N PHE A 761 O TYR A 809 SHEET 4 G 6 SER B 757 ALA B 766 -1 O GLY B 759 N THR A 764 SHEET 5 G 6 THR B 804 GLY B 813 -1 O TYR B 809 N PHE B 761 SHEET 6 G 6 ALA B 797 ASP B 799 -1 N ILE B 798 O THR B 806 SHEET 1 H 3 LYS A 826 HIS A 827 0 SHEET 2 H 3 GLY A 815 LEU A 823 -1 N LEU A 823 O LYS A 826 SHEET 3 H 3 PHE A 833 LEU A 837 -1 O GLN A 835 N PHE A 817 SHEET 1 I 4 LYS A 826 HIS A 827 0 SHEET 2 I 4 GLY A 815 LEU A 823 -1 N LEU A 823 O LYS A 826 SHEET 3 I 4 PHE A 782 THR A 787 -1 N SER A 785 O GLY A 820 SHEET 4 I 4 THR A 851 ALA A 856 -1 O ARG A 854 N VAL A 784 SHEET 1 J 4 TYR B 555 GLU B 557 0 SHEET 2 J 4 SER B 570 HIS B 575 -1 O LYS B 573 N GLU B 557 SHEET 3 J 4 THR B 612 PHE B 617 -1 O VAL B 615 N PHE B 572 SHEET 4 J 4 VAL B 604 VAL B 606 -1 N VAL B 606 O ASP B 614 SHEET 1 K 2 PHE B 591 VAL B 592 0 SHEET 2 K 2 THR B 630 LEU B 631 -1 O THR B 630 N VAL B 592 SHEET 1 L 3 ILE B 595 GLU B 596 0 SHEET 2 L 3 ASP B 624 ILE B 627 -1 O VAL B 626 N GLU B 596 SHEET 3 L 3 LYS B 641 THR B 644 -1 O VAL B 643 N TYR B 625 SHEET 1 M 4 TYR B 655 GLU B 657 0 SHEET 2 M 4 ALA B 670 PHE B 675 -1 O THR B 673 N GLU B 657 SHEET 3 M 4 THR B 714 TYR B 719 -1 O TYR B 715 N ILE B 674 SHEET 4 M 4 LYS B 706 VAL B 707 -1 N LYS B 706 O VAL B 718 SHEET 1 N 5 LYS B 663 PHE B 665 0 SHEET 2 N 5 ILE B 743 ILE B 748 1 O ILE B 748 N VAL B 664 SHEET 3 N 5 GLY B 725 LEU B 733 -1 N VAL B 729 O ILE B 743 SHEET 4 N 5 PHE B 691 ASN B 696 -1 N ALA B 694 O ASN B 730 SHEET 5 N 5 VAL B 702 VAL B 703 -1 O VAL B 703 N ILE B 695 SHEET 1 O 4 LYS B 663 PHE B 665 0 SHEET 2 O 4 ILE B 743 ILE B 748 1 O ILE B 748 N VAL B 664 SHEET 3 O 4 GLY B 725 LEU B 733 -1 N VAL B 729 O ILE B 743 SHEET 4 O 4 ASN B 736 PRO B 737 -1 O ASN B 736 N LEU B 733 SHEET 1 P 4 PHE B 833 LEU B 837 0 SHEET 2 P 4 GLY B 815 LEU B 823 -1 N PHE B 817 O GLN B 835 SHEET 3 P 4 PHE B 782 GLY B 788 -1 N SER B 785 O GLY B 820 SHEET 4 P 4 PHE B 850 ALA B 856 -1 O ALA B 856 N PHE B 782 CISPEP 1 PHE A 639 PRO A 640 0 -2.46 CISPEP 2 MET A 741 PRO A 742 0 23.31 CISPEP 3 SER A 831 PRO A 832 0 4.45 CISPEP 4 PHE B 639 PRO B 640 0 -0.60 CISPEP 5 MET B 741 PRO B 742 0 6.73 CISPEP 6 SER B 831 PRO B 832 0 2.07 CRYST1 56.320 61.670 119.030 90.00 104.10 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017756 0.000000 0.004460 0.00000 SCALE2 0.000000 0.016215 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008662 0.00000