data_1WM8 # _entry.id 1WM8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.292 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1WM8 RCSB RCSB023734 WWPDB D_1000023734 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1DU9 'Solution structures of BmP02, a natural scorpion toxin which blocks apamin-sensitive calcium-activated potassium channel' unspecified PDB 1ACW ;Solution structures of P01, a natural scorpion peptide structurally analogus to scorpion toxins specific for apamin-sensitive potassium channel ; unspecified PDB 1PNH 'Solution structure of P05-NH2,a scorpion toxin analog with high affinity for the apamin-sensitive potassium channel' unspecified PDB 1SCY 'Solution structures of scyllatoxin,a scorpion toxin with high affinity for apamin-sensitive calcium-activated potassium channel' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1WM8 _pdbx_database_status.recvd_initial_deposition_date 2004-07-05 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wu, H.' 1 'He, F.' 2 'Li, Y.' 3 'Wu, G.' 4 'Cao, C.' 5 'Chen, X.' 6 # _citation.id primary _citation.title 'Three-Dimensional Structure of BmP03 from Venom of Scorpion Buthus martensii Karsch' _citation.journal_abbrev 'Acta Chim.Sinica' _citation.journal_volume 58 _citation.page_first 850 _citation.page_last 855 _citation.year 2000 _citation.journal_id_ASTM ? _citation.country CN _citation.journal_id_ISSN 0567-7351 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed -1 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'He, F.' 1 primary 'Li, Y.' 2 primary 'Wu, G.' 3 primary 'Cao, C.' 4 primary 'Wu, H.' 5 # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description 'Neurotoxin BmP03' _entity.formula_weight 2944.347 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Potassium ion channel blocker P03' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code VGCEECPMHCKGKNANPTCDDGVCNCNV _entity_poly.pdbx_seq_one_letter_code_can VGCEECPMHCKGKNANPTCDDGVCNCNV _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 GLY n 1 3 CYS n 1 4 GLU n 1 5 GLU n 1 6 CYS n 1 7 PRO n 1 8 MET n 1 9 HIS n 1 10 CYS n 1 11 LYS n 1 12 GLY n 1 13 LYS n 1 14 ASN n 1 15 ALA n 1 16 ASN n 1 17 PRO n 1 18 THR n 1 19 CYS n 1 20 ASP n 1 21 ASP n 1 22 GLY n 1 23 VAL n 1 24 CYS n 1 25 ASN n 1 26 CYS n 1 27 ASN n 1 28 VAL n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name 'Chinese scorpion' _entity_src_nat.pdbx_organism_scientific 'Mesobuthus martensii' _entity_src_nat.pdbx_ncbi_taxonomy_id 34649 _entity_src_nat.genus Mesobuthus _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SCP3_MESMA _struct_ref.pdbx_db_accession Q9U8D1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code VGCEECPMHCKGKNANPTCDDGVCNCNV _struct_ref.pdbx_align_begin 29 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1WM8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 28 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9U8D1 _struct_ref_seq.db_align_beg 29 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 56 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 28 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 '2D NOESY, 2D TOCSY, DQF-COSY' 2 2 1 '2D NOESY, 2D TOCSY, DQF-COSY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 303 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 3.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 3.7mM '90% H2O/10% D2O' 2 3.7mM '100% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.field_strength 600 # _pdbx_nmr_refine.entry_id 1WM8 _pdbx_nmr_refine.method 'distance geometry' _pdbx_nmr_refine.details ;the structure are based on a total of 268 constraints, 241 are NOE-derived distance constraints,6 dihedral angle constraints,21 distance constraints from six hydrogen bonds and three disulfide bonds. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1WM8 _pdbx_nmr_details.text 'This structure was determined using standard 2D homonuclear techniques.' # _pdbx_nmr_ensemble.entry_id 1WM8 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1WM8 _pdbx_nmr_representative.conformer_id 2 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal VNMR 6.1B collection 'Mike Carlisle, Dan Steele, Mike Miller' 1 VNMR 6.1B processing 'Mike Carlisle, Dan Steele, Mike Miller' 2 'Sybyl(NMR Triad model)' 6.3 'data analysis' 'Tripos, Inc.' 3 'Sybyl(DIANA program)' 6.3 'structure solution' 'Tripos, Inc.' 4 Sybyl 6.3 refinement 'Tripos, Inc.' 5 # _exptl.entry_id 1WM8 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1WM8 _struct.title 'Solution Structure of BmP03 from the Venom of Scorpion Buthus martensii Karsch, 10 structures' _struct.pdbx_descriptor 'Neurotoxin BmP03' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1WM8 _struct_keywords.pdbx_keywords TOXIN _struct_keywords.text 'ALPHA/BETA scaffold, toxin' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id PRO _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 7 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id LYS _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 11 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id PRO _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 7 _struct_conf.end_auth_comp_id LYS _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 11 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 19 SG ? ? A CYS 3 A CYS 19 1_555 ? ? ? ? ? ? ? 2.074 ? disulf2 disulf ? ? A CYS 6 SG ? ? ? 1_555 A CYS 24 SG ? ? A CYS 6 A CYS 24 1_555 ? ? ? ? ? ? ? 2.026 ? disulf3 disulf ? ? A CYS 10 SG ? ? ? 1_555 A CYS 26 SG ? ? A CYS 10 A CYS 26 1_555 ? ? ? ? ? ? ? 2.018 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1WM8 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1WM8 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 1 1 VAL VAL A . n A 1 2 GLY 2 2 2 GLY GLY A . n A 1 3 CYS 3 3 3 CYS CYS A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 CYS 6 6 6 CYS CYS A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 MET 8 8 8 MET MET A . n A 1 9 HIS 9 9 9 HIS HIS A . n A 1 10 CYS 10 10 10 CYS CYS A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 ASN 14 14 14 ASN ASN A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 ASN 16 16 16 ASN ASN A . n A 1 17 PRO 17 17 17 PRO PRO A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 CYS 19 19 19 CYS CYS A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 CYS 24 24 24 CYS CYS A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 CYS 26 26 26 CYS CYS A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 VAL 28 28 28 VAL VAL A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 2440 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-07-27 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-04-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_struct_assembly 2 4 'Structure model' pdbx_struct_assembly_prop 3 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HG23 A THR 18 ? ? H A CYS 19 ? ? 1.04 2 1 O A CYS 24 ? ? OD1 A ASN 25 ? ? 1.21 3 1 O A CYS 3 ? ? HG3 A GLU 4 ? ? 1.24 4 1 O A CYS 19 ? ? OD1 A ASP 20 ? ? 1.56 5 2 HG23 A THR 18 ? ? H A CYS 19 ? ? 1.11 6 2 HG23 A VAL 23 ? ? H A CYS 24 ? ? 1.28 7 2 O A ASN 27 ? ? HG23 A VAL 28 ? ? 1.35 8 2 O A CYS 19 ? ? OD1 A ASP 20 ? ? 1.36 9 2 O A CYS 3 ? ? HG3 A GLU 4 ? ? 1.46 10 2 O A CYS 24 ? ? CG A ASN 25 ? ? 1.74 11 3 HG23 A THR 18 ? ? H A CYS 19 ? ? 0.98 12 3 OD1 A ASP 20 ? ? O A VAL 23 ? ? 1.61 13 4 HG23 A THR 18 ? ? H A CYS 19 ? ? 0.98 14 4 O A CYS 3 ? ? HG3 A GLU 4 ? ? 1.31 15 4 OD1 A ASP 20 ? ? O A VAL 23 ? ? 1.55 16 4 O A CYS 19 ? ? CG A ASP 20 ? ? 1.78 17 5 O A CYS 3 ? ? HG3 A GLU 4 ? ? 1.21 18 5 HG23 A THR 18 ? ? H A CYS 19 ? ? 1.30 19 5 OD1 A ASP 20 ? ? O A VAL 23 ? ? 1.56 20 5 O A CYS 19 ? ? CG A ASP 20 ? ? 1.68 21 6 O A CYS 3 ? ? HG3 A GLU 4 ? ? 1.16 22 6 O A ASN 27 ? ? HG23 A VAL 28 ? ? 1.41 23 6 O A CYS 19 ? ? CG A ASP 20 ? ? 1.51 24 6 O A CYS 19 ? ? OD2 A ASP 20 ? ? 1.54 25 6 OD1 A ASP 20 ? ? O A VAL 23 ? ? 1.56 26 6 O A CYS 24 ? ? CG A ASN 25 ? ? 1.58 27 7 O A CYS 3 ? ? HG3 A GLU 4 ? ? 1.21 28 7 O A CYS 19 ? ? OD2 A ASP 20 ? ? 1.37 29 7 OD1 A ASP 20 ? ? O A VAL 23 ? ? 1.44 30 7 O A CYS 19 ? ? CG A ASP 20 ? ? 1.65 31 8 O A CYS 19 ? ? OD1 A ASP 20 ? ? 1.22 32 8 O A CYS 19 ? ? CG A ASP 20 ? ? 1.56 33 9 O A CYS 19 ? ? OD1 A ASP 20 ? ? 0.83 34 9 HA A ALA 15 ? ? HG11 A VAL 28 ? ? 1.00 35 9 O A CYS 19 ? ? CG A ASP 20 ? ? 1.20 36 9 O A CYS 24 ? ? OD1 A ASN 25 ? ? 1.34 37 9 HA A ALA 15 ? ? CG1 A VAL 28 ? ? 1.39 38 9 OD2 A ASP 20 ? ? O A VAL 23 ? ? 1.96 39 10 HG23 A THR 18 ? ? H A CYS 19 ? ? 1.01 40 10 O A ASN 27 ? ? HG23 A VAL 28 ? ? 1.31 41 10 O A CYS 3 ? ? HG3 A GLU 4 ? ? 1.42 42 10 O A CYS 19 ? ? OD1 A ASP 20 ? ? 1.45 43 10 O A CYS 24 ? ? OD1 A ASN 25 ? ? 1.74 44 10 OD1 A ASP 20 ? ? O A VAL 23 ? ? 1.93 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CE1 A HIS 9 ? ? NE2 A HIS 9 ? ? 1.247 1.317 -0.070 0.011 N 2 1 C A ASN 16 ? ? N A PRO 17 ? ? 1.455 1.338 0.117 0.019 Y 3 2 C A ASN 16 ? ? N A PRO 17 ? ? 1.463 1.338 0.125 0.019 Y 4 2 C A VAL 28 ? ? OXT A VAL 28 ? ? 1.345 1.229 0.116 0.019 N 5 3 CE1 A HIS 9 ? ? NE2 A HIS 9 ? ? 1.233 1.317 -0.084 0.011 N 6 3 C A VAL 28 ? ? OXT A VAL 28 ? ? 1.372 1.229 0.143 0.019 N 7 4 C A ASN 16 ? ? N A PRO 17 ? ? 1.459 1.338 0.121 0.019 Y 8 4 C A VAL 28 ? ? OXT A VAL 28 ? ? 1.350 1.229 0.121 0.019 N 9 6 CE1 A HIS 9 ? ? NE2 A HIS 9 ? ? 1.242 1.317 -0.075 0.011 N 10 6 CA A ALA 15 ? ? CB A ALA 15 ? ? 1.369 1.520 -0.151 0.021 N 11 6 C A ALA 15 ? ? N A ASN 16 ? ? 1.483 1.336 0.147 0.023 Y 12 6 C A ASN 16 ? ? N A PRO 17 ? ? 1.481 1.338 0.143 0.019 Y 13 6 C A VAL 28 ? ? OXT A VAL 28 ? ? 1.357 1.229 0.128 0.019 N 14 7 C A ASN 16 ? ? N A PRO 17 ? ? 1.465 1.338 0.127 0.019 Y 15 7 C A VAL 28 ? ? OXT A VAL 28 ? ? 1.353 1.229 0.124 0.019 N 16 9 CE1 A HIS 9 ? ? NE2 A HIS 9 ? ? 1.239 1.317 -0.078 0.011 N 17 9 C A ASN 16 ? ? N A PRO 17 ? ? 1.453 1.338 0.115 0.019 Y 18 9 C A VAL 28 ? ? OXT A VAL 28 ? ? 1.346 1.229 0.117 0.019 N 19 10 CE1 A HIS 9 ? ? NE2 A HIS 9 ? ? 1.247 1.317 -0.070 0.011 N 20 10 C A VAL 28 ? ? OXT A VAL 28 ? ? 1.354 1.229 0.125 0.019 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A CYS 6 ? ? CB A CYS 6 ? ? SG A CYS 6 ? ? 101.43 114.00 -12.57 1.80 N 2 1 N A ALA 15 ? ? CA A ALA 15 ? ? CB A ALA 15 ? ? 119.13 110.10 9.03 1.40 N 3 2 CA A CYS 3 ? ? CB A CYS 3 ? ? SG A CYS 3 ? ? 123.41 114.20 9.21 1.10 N 4 2 CA A PRO 7 ? ? N A PRO 7 ? ? CD A PRO 7 ? ? 121.31 111.70 9.61 1.40 N 5 2 CA A VAL 23 ? ? CB A VAL 23 ? ? CG1 A VAL 23 ? ? 120.16 110.90 9.26 1.50 N 6 3 N A ALA 15 ? ? CA A ALA 15 ? ? CB A ALA 15 ? ? 118.53 110.10 8.43 1.40 N 7 4 CB A ASP 21 ? ? CA A ASP 21 ? ? C A ASP 21 ? ? 122.64 110.40 12.24 2.00 N 8 5 CA A CYS 6 ? ? CB A CYS 6 ? ? SG A CYS 6 ? ? 101.76 114.00 -12.24 1.80 N 9 5 CB A HIS 9 ? ? CG A HIS 9 ? ? CD2 A HIS 9 ? ? 118.74 129.70 -10.96 1.60 N 10 5 CB A ASP 20 ? ? CG A ASP 20 ? ? OD2 A ASP 20 ? ? 111.93 118.30 -6.37 0.90 N 11 5 N A ASN 25 ? ? CA A ASN 25 ? ? CB A ASN 25 ? ? 99.69 110.60 -10.91 1.80 N 12 6 CB A ASP 20 ? ? CG A ASP 20 ? ? OD2 A ASP 20 ? ? 123.72 118.30 5.42 0.90 N 13 7 CB A CYS 3 ? ? CA A CYS 3 ? ? C A CYS 3 ? ? 125.50 111.50 14.00 1.20 N 14 7 CA A PRO 7 ? ? N A PRO 7 ? ? CD A PRO 7 ? ? 120.90 111.70 9.20 1.40 N 15 7 N A PRO 7 ? ? CA A PRO 7 ? ? CB A PRO 7 ? ? 94.41 103.30 -8.89 1.20 N 16 8 N A GLU 4 ? ? CA A GLU 4 ? ? CB A GLU 4 ? ? 121.70 110.60 11.10 1.80 N 17 8 CB A ASP 20 ? ? CG A ASP 20 ? ? OD1 A ASP 20 ? ? 112.11 118.30 -6.19 0.90 N 18 8 CA A CYS 24 ? ? C A CYS 24 ? ? O A CYS 24 ? ? 106.41 120.10 -13.69 2.10 N 19 8 O A CYS 24 ? ? C A CYS 24 ? ? N A ASN 25 ? ? 132.34 122.70 9.64 1.60 Y 20 9 N A GLU 5 ? ? CA A GLU 5 ? ? CB A GLU 5 ? ? 122.26 110.60 11.66 1.80 N 21 9 CB A ASP 21 ? ? CG A ASP 21 ? ? OD2 A ASP 21 ? ? 111.96 118.30 -6.34 0.90 N 22 10 CA A CYS 24 ? ? CB A CYS 24 ? ? SG A CYS 24 ? ? 102.12 114.00 -11.88 1.80 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 4 ? ? 145.80 -55.28 2 1 LYS A 11 ? ? -34.30 72.86 3 1 LYS A 13 ? ? 130.56 -52.41 4 1 ALA A 15 ? ? 127.68 -169.97 5 1 ASN A 16 ? ? 155.17 -90.91 6 1 PRO A 17 ? ? -48.35 -129.15 7 1 THR A 18 ? ? -69.46 -167.76 8 1 ASP A 20 ? ? 74.78 55.75 9 1 ASP A 21 ? ? 71.17 -151.07 10 1 VAL A 23 ? ? -57.24 170.89 11 1 ASN A 25 ? ? 158.65 -162.12 12 1 ASN A 27 ? ? 148.55 -46.93 13 2 GLU A 4 ? ? 159.66 -55.09 14 2 LYS A 11 ? ? -33.95 70.02 15 2 LYS A 13 ? ? 136.17 -59.08 16 2 ALA A 15 ? ? 137.92 -163.75 17 2 ASN A 16 ? ? 141.70 -102.11 18 2 PRO A 17 ? ? -41.13 -131.98 19 2 THR A 18 ? ? -69.69 -170.08 20 2 ASP A 20 ? ? 85.26 54.37 21 2 ASP A 21 ? ? 66.19 -159.68 22 2 VAL A 23 ? ? -52.54 172.93 23 2 ASN A 25 ? ? 155.02 -153.76 24 2 ASN A 27 ? ? 154.81 -42.86 25 3 GLU A 4 ? ? 166.82 -63.15 26 3 CYS A 6 ? ? -41.72 -72.68 27 3 LYS A 11 ? ? -53.24 84.72 28 3 LYS A 13 ? ? 146.05 -62.20 29 3 ALA A 15 ? ? 140.63 -165.74 30 3 ASN A 16 ? ? 147.70 -104.55 31 3 PRO A 17 ? ? -50.55 -127.15 32 3 THR A 18 ? ? -69.40 -165.87 33 3 ASP A 20 ? ? 99.89 57.07 34 3 ASP A 21 ? ? 53.18 -158.19 35 3 VAL A 23 ? ? -48.45 170.75 36 3 ASN A 25 ? ? 140.64 -164.71 37 3 ASN A 27 ? ? 159.03 -47.97 38 4 GLU A 4 ? ? 170.24 -62.76 39 4 MET A 8 ? ? -33.35 -73.23 40 4 HIS A 9 ? ? -36.71 -39.85 41 4 CYS A 10 ? ? -39.63 -36.35 42 4 LYS A 11 ? ? -52.34 79.55 43 4 LYS A 13 ? ? 144.36 -48.86 44 4 ALA A 15 ? ? 152.25 -168.41 45 4 ASN A 16 ? ? 143.01 -115.91 46 4 PRO A 17 ? ? -53.73 -135.77 47 4 THR A 18 ? ? -64.58 -167.97 48 4 ASP A 20 ? ? 102.53 50.27 49 4 ASP A 21 ? ? 61.50 -168.30 50 4 VAL A 23 ? ? -40.50 154.46 51 4 ASN A 25 ? ? 145.33 -162.03 52 4 ASN A 27 ? ? 156.59 -42.63 53 5 GLU A 4 ? ? 174.62 -58.01 54 5 LYS A 13 ? ? 152.08 -53.94 55 5 ALA A 15 ? ? 123.63 -174.71 56 5 ASN A 16 ? ? 168.36 -83.80 57 5 PRO A 17 ? ? -58.00 -134.38 58 5 THR A 18 ? ? -69.80 -176.42 59 5 ASP A 20 ? ? 98.71 49.25 60 5 ASP A 21 ? ? 59.24 -168.92 61 5 ASN A 25 ? ? 143.85 -161.58 62 5 ASN A 27 ? ? 152.84 -49.96 63 6 GLU A 4 ? ? 170.16 -47.26 64 6 CYS A 10 ? ? -36.39 -39.12 65 6 LYS A 11 ? ? -66.15 84.63 66 6 LYS A 13 ? ? 154.48 -53.72 67 6 ALA A 15 ? ? 152.92 -163.86 68 6 ASN A 16 ? ? 128.25 -118.87 69 6 PRO A 17 ? ? -43.29 -157.84 70 6 THR A 18 ? ? -47.51 -178.80 71 6 ASP A 20 ? ? 105.78 44.80 72 6 ASP A 21 ? ? 67.33 -176.05 73 6 ASN A 25 ? ? 143.97 -157.33 74 6 ASN A 27 ? ? 142.22 -48.43 75 7 GLU A 4 ? ? 156.95 -63.75 76 7 LYS A 11 ? ? -44.41 61.09 77 7 LYS A 13 ? ? 149.03 -56.33 78 7 ALA A 15 ? ? 132.67 -160.42 79 7 ASN A 16 ? ? 144.19 -98.83 80 7 PRO A 17 ? ? -34.27 -143.64 81 7 ASP A 20 ? ? 102.24 45.32 82 7 ASP A 21 ? ? 59.71 -172.78 83 7 ASN A 25 ? ? 151.19 -154.17 84 7 ASN A 27 ? ? 154.81 -44.15 85 8 GLU A 4 ? ? 144.31 -52.06 86 8 LYS A 11 ? ? -55.09 69.60 87 8 LYS A 13 ? ? 150.35 -49.38 88 8 ALA A 15 ? ? 166.55 -171.15 89 8 ASN A 16 ? ? 153.70 -97.98 90 8 PRO A 17 ? ? -51.75 -134.38 91 8 ASP A 20 ? ? 90.68 52.54 92 8 ASP A 21 ? ? 63.06 -177.64 93 8 ASN A 25 ? ? 171.34 -148.11 94 8 ASN A 27 ? ? 167.50 -47.52 95 9 GLU A 4 ? ? 134.18 -55.60 96 9 CYS A 6 ? ? -22.88 -84.13 97 9 LYS A 11 ? ? -44.51 63.36 98 9 LYS A 13 ? ? 143.18 -45.68 99 9 ALA A 15 ? ? 134.06 -154.35 100 9 ASN A 16 ? ? 145.38 -101.87 101 9 PRO A 17 ? ? -45.15 -142.58 102 9 ASP A 20 ? ? 87.95 46.78 103 9 ASP A 21 ? ? 62.97 -176.06 104 9 VAL A 23 ? ? -37.93 145.30 105 9 ASN A 25 ? ? 163.92 -143.30 106 9 ASN A 27 ? ? 157.65 -52.58 107 10 GLU A 4 ? ? 152.27 -50.25 108 10 LYS A 11 ? ? -45.88 81.69 109 10 LYS A 13 ? ? 124.40 -55.26 110 10 ALA A 15 ? ? 128.38 176.98 111 10 ASN A 16 ? ? 171.94 -93.18 112 10 PRO A 17 ? ? -59.28 -114.33 113 10 THR A 18 ? ? -76.78 -162.85 114 10 ASP A 20 ? ? 80.57 55.22 115 10 ASP A 21 ? ? 59.25 -145.45 116 10 ASN A 25 ? ? 159.25 -150.56 117 10 ASN A 27 ? ? 152.88 -49.54 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 ASN A 16 ? ? PRO A 17 ? ? -146.47 2 2 ASN A 16 ? ? PRO A 17 ? ? -140.98 3 3 ASN A 16 ? ? PRO A 17 ? ? -131.45 4 4 ASN A 16 ? ? PRO A 17 ? ? -140.93 5 4 PRO A 17 ? ? THR A 18 ? ? -139.11 6 5 ASN A 16 ? ? PRO A 17 ? ? -143.62 7 6 ASN A 16 ? ? PRO A 17 ? ? -142.16 8 6 PRO A 17 ? ? THR A 18 ? ? -142.59 9 7 ASN A 16 ? ? PRO A 17 ? ? -144.89 10 8 ALA A 15 ? ? ASN A 16 ? ? 142.84 11 8 ASN A 16 ? ? PRO A 17 ? ? -139.82 12 9 ASN A 16 ? ? PRO A 17 ? ? -143.42 13 10 ASN A 16 ? ? PRO A 17 ? ? -133.76 #