HEADER SIGNALING PROTEIN 24-JUL-04 1WN0 TITLE CRYSTAL STRUCTURE OF HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN, TITLE 2 ZMHP2, FROM MAIZE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZEA MAYS; SOURCE 3 ORGANISM_TAXID: 4577; SOURCE 4 GENE: ZMHP2; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: M15; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PQE30 KEYWDS FOUR-HELIX BUNDLE, SIGNALING PROTEIN, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 2 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, KEYWDS 3 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI EXPDTA X-RAY DIFFRACTION AUTHOR H.SUGAWARA,Y.KAWANO,T.HATAKEYAMA,T.YAMAYA,N.KAMIYA,H.SAKAKIBARA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 6 03-APR-24 1WN0 1 REMARK REVDAT 5 13-MAR-24 1WN0 1 REMARK REVDAT 4 13-JUL-11 1WN0 1 VERSN REVDAT 3 24-FEB-09 1WN0 1 VERSN REVDAT 2 09-OCT-07 1WN0 1 REMARK AUTHOR KEYWDS REVDAT 1 25-JAN-05 1WN0 0 JRNL AUTH H.SUGAWARA,Y.KAWANO,T.HATAKEYAMA,T.YAMAYA,N.KAMIYA, JRNL AUTH 2 H.SAKAKIBARA JRNL TITL CRYSTAL STRUCTURE OF THE HISTIDINE-CONTAINING JRNL TITL 2 PHOSPHOTRANSFER PROTEIN ZMHP2 FROM MAIZE JRNL REF PROTEIN SCI. V. 14 202 2005 JRNL REFN ISSN 0961-8368 JRNL PMID 15576555 JRNL DOI 10.1110/PS.041076905 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.84 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 3 NUMBER OF REFLECTIONS : 40566 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2141 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 REFLECTION IN BIN (WORKING SET) : 2847 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE SET COUNT : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4175 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 103 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.204 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.184 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.125 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.951 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4226 ; 0.041 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3832 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5687 ; 2.556 ; 1.957 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8932 ; 1.178 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 526 ; 6.277 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 648 ; 0.189 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4740 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 826 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1064 ; 0.248 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 4076 ; 0.253 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 2428 ; 0.102 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 95 ; 0.188 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 17 ; 0.278 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 50 ; 0.316 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.174 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2632 ; 1.542 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4211 ; 2.713 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1594 ; 4.590 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1476 ; 7.420 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 9 A 139 REMARK 3 ORIGIN FOR THE GROUP (A): 89.0189 19.7361 14.1290 REMARK 3 T TENSOR REMARK 3 T11: 0.0431 T22: 0.0787 REMARK 3 T33: 0.0511 T12: 0.0046 REMARK 3 T13: 0.0016 T23: 0.0171 REMARK 3 L TENSOR REMARK 3 L11: 0.7444 L22: -0.0002 REMARK 3 L33: 0.4836 L12: -0.0421 REMARK 3 L13: -0.4104 L23: -0.1269 REMARK 3 S TENSOR REMARK 3 S11: 0.0312 S12: 0.0144 S13: 0.0131 REMARK 3 S21: 0.0057 S22: 0.0281 S23: 0.0041 REMARK 3 S31: -0.0501 S32: -0.0328 S33: -0.0593 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 11 B 138 REMARK 3 ORIGIN FOR THE GROUP (A): 57.7854 -18.4723 -12.0213 REMARK 3 T TENSOR REMARK 3 T11: 0.0012 T22: 0.0782 REMARK 3 T33: 0.0608 T12: 0.0090 REMARK 3 T13: 0.0026 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 0.2469 L22: 0.2695 REMARK 3 L33: 1.4006 L12: -0.0367 REMARK 3 L13: -0.1875 L23: -0.0708 REMARK 3 S TENSOR REMARK 3 S11: -0.0279 S12: -0.0501 S13: -0.0373 REMARK 3 S21: 0.0138 S22: 0.0007 S23: -0.0493 REMARK 3 S31: -0.0028 S32: 0.0375 S33: 0.0271 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 5 C 142 REMARK 3 ORIGIN FOR THE GROUP (A): 48.7869 0.4862 4.4026 REMARK 3 T TENSOR REMARK 3 T11: 0.0327 T22: 0.0850 REMARK 3 T33: 0.0432 T12: -0.0015 REMARK 3 T13: -0.0082 T23: -0.0065 REMARK 3 L TENSOR REMARK 3 L11: 0.2289 L22: 0.4331 REMARK 3 L33: -0.0202 L12: 0.0680 REMARK 3 L13: 0.0340 L23: 0.0757 REMARK 3 S TENSOR REMARK 3 S11: -0.0449 S12: 0.0046 S13: 0.0149 REMARK 3 S21: 0.0273 S22: 0.0473 S23: -0.0270 REMARK 3 S31: 0.0199 S32: -0.0047 S33: -0.0024 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 5 D 142 REMARK 3 ORIGIN FOR THE GROUP (A): 78.2699 0.5031 28.5457 REMARK 3 T TENSOR REMARK 3 T11: 0.0169 T22: 0.0759 REMARK 3 T33: 0.0589 T12: 0.0010 REMARK 3 T13: -0.0089 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.1110 L22: 0.5635 REMARK 3 L33: 0.1978 L12: -0.0003 REMARK 3 L13: 0.0009 L23: 0.2855 REMARK 3 S TENSOR REMARK 3 S11: 0.0283 S12: -0.0030 S13: -0.0102 REMARK 3 S21: -0.0400 S22: 0.0028 S23: 0.0579 REMARK 3 S31: -0.0158 S32: -0.0020 S33: -0.0312 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WN0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-JUL-04. REMARK 100 THE DEPOSITION ID IS D_1000023762. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-FEB-03; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; NULL REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SPRING-8; SPRING-8 REMARK 200 BEAMLINE : BL45XU; BL45XU REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00; 0.9791, 0.9793, 0.982 REMARK 200 MONOCHROMATOR : DIAMOND TRICHROMATOR; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; NULL REMARK 200 DETECTOR MANUFACTURER : RIGAKU JUPITER 210; NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42707 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: SELENOMETHIONINE LABELED PROTEIN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM AMMONIUM SULFATE, 100MM SODIUM REMARK 280 ACETATE BUFFER, PH 4.2, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 74.40000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.70500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 74.40000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 40.70500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 LEU A 6 REMARK 465 ARG A 7 REMARK 465 GLU A 8 REMARK 465 GLN A 140 REMARK 465 ILE A 141 REMARK 465 GLN A 142 REMARK 465 ALA A 143 REMARK 465 GLN A 144 REMARK 465 GLN A 145 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 ALA B 3 REMARK 465 ALA B 4 REMARK 465 ALA B 5 REMARK 465 LEU B 6 REMARK 465 ARG B 7 REMARK 465 GLU B 8 REMARK 465 GLN B 9 REMARK 465 LEU B 10 REMARK 465 GLU B 35 REMARK 465 ASP B 36 REMARK 465 GLY B 37 REMARK 465 GLY B 38 REMARK 465 GLN B 139 REMARK 465 GLN B 140 REMARK 465 ILE B 141 REMARK 465 GLN B 142 REMARK 465 ALA B 143 REMARK 465 GLN B 144 REMARK 465 GLN B 145 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 ALA C 3 REMARK 465 ALA C 4 REMARK 465 ALA C 143 REMARK 465 GLN C 144 REMARK 465 GLN C 145 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 ALA D 3 REMARK 465 ALA D 4 REMARK 465 ALA D 143 REMARK 465 GLN D 144 REMARK 465 GLN D 145 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 45 ND2 ASN D 109 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 25 CD GLU A 25 OE1 0.067 REMARK 500 ALA A 44 CA ALA A 44 CB 0.132 REMARK 500 LYS A 95 CE LYS A 95 NZ 0.250 REMARK 500 ARG A 110 CD ARG A 110 NE -0.169 REMARK 500 ARG A 110 NE ARG A 110 CZ -0.101 REMARK 500 MET B 32 SD MET B 32 CE 0.438 REMARK 500 ALA B 77 CA ALA B 77 CB 0.138 REMARK 500 LYS B 93 CD LYS B 93 CE 0.171 REMARK 500 LYS B 95 CE LYS B 95 NZ 0.231 REMARK 500 ARG B 110 CD ARG B 110 NE -0.114 REMARK 500 SER C 59 CB SER C 59 OG -0.091 REMARK 500 GLU C 60 CG GLU C 60 CD 0.098 REMARK 500 TYR C 78 CG TYR C 78 CD2 -0.111 REMARK 500 ARG C 102 NE ARG C 102 CZ 0.104 REMARK 500 SER D 15 CA SER D 15 CB 0.103 REMARK 500 SER D 15 CB SER D 15 OG 0.083 REMARK 500 PHE D 27 CZ PHE D 27 CE2 0.127 REMARK 500 SER D 59 CB SER D 59 OG -0.089 REMARK 500 GLU D 60 CD GLU D 60 OE2 0.076 REMARK 500 ILE D 69 CB ILE D 69 CG2 0.197 REMARK 500 VAL D 79 CB VAL D 79 CG2 -0.150 REMARK 500 LYS D 83 CD LYS D 83 CE 0.184 REMARK 500 ARG D 102 NE ARG D 102 CZ 0.087 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 24 CB - CG - OD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 ASP A 76 CB - CG - OD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 ASP A 107 CB - CG - OD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 ARG A 110 CG - CD - NE ANGL. DEV. = -13.2 DEGREES REMARK 500 ARG A 110 NE - CZ - NH2 ANGL. DEV. = -6.6 DEGREES REMARK 500 ASP A 111 CB - CG - OD2 ANGL. DEV. = 7.0 DEGREES REMARK 500 ARG A 128 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 ASP B 24 CB - CG - OD2 ANGL. DEV. = 7.2 DEGREES REMARK 500 ASP B 53 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 LEU B 64 CB - CG - CD1 ANGL. DEV. = 14.9 DEGREES REMARK 500 ARG B 110 NE - CZ - NH2 ANGL. DEV. = -5.3 DEGREES REMARK 500 ASP B 126 CB - CG - OD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 ARG B 128 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ASP C 24 CB - CG - OD2 ANGL. DEV. = 8.3 DEGREES REMARK 500 LEU C 49 CA - CB - CG ANGL. DEV. = -24.1 DEGREES REMARK 500 LEU C 49 CB - CG - CD2 ANGL. DEV. = 13.4 DEGREES REMARK 500 ASP C 52 CB - CG - OD2 ANGL. DEV. = 7.5 DEGREES REMARK 500 ARG C 56 NE - CZ - NH2 ANGL. DEV. = -4.9 DEGREES REMARK 500 GLU C 60 OE1 - CD - OE2 ANGL. DEV. = -8.8 DEGREES REMARK 500 ASP C 76 CB - CG - OD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 MET C 99 CG - SD - CE ANGL. DEV. = 12.7 DEGREES REMARK 500 ARG C 102 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ASP C 107 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP C 111 CB - CG - OD1 ANGL. DEV. = 7.0 DEGREES REMARK 500 ARG C 121 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ASP D 24 CB - CG - OD2 ANGL. DEV. = 10.6 DEGREES REMARK 500 LEU D 49 CA - CB - CG ANGL. DEV. = -24.6 DEGREES REMARK 500 ASP D 55 CB - CG - OD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 ARG D 56 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ASP D 73 CB - CG - OD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 ASP D 76 CB - CG - OD1 ANGL. DEV. = -6.3 DEGREES REMARK 500 ASP D 76 CB - CG - OD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 MET D 99 CG - SD - CE ANGL. DEV. = 13.5 DEGREES REMARK 500 ARG D 102 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG D 121 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG D 121 NE - CZ - NH2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ARG D 128 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 15 -61.48 -24.07 REMARK 500 ASP B 24 -157.90 -115.89 REMARK 500 LEU B 137 -74.10 -47.93 REMARK 500 ASP C 24 -157.45 -125.16 REMARK 500 ASP D 24 -155.78 -123.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 37 GLY A 38 -139.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1OXB RELATED DB: PDB REMARK 900 YEAST HPT PROTEIN YPD1 - RESPONSE REGULATOR SLN1 COMPLEX REMARK 900 RELATED ID: 2A0B RELATED DB: PDB REMARK 900 HPT DOMAIN OF ARCB FROM E. COLI REMARK 900 RELATED ID: 1I5N RELATED DB: PDB REMARK 900 P1 DOMAIN OF CHEA FROM S. TYPHIMURIUM REMARK 900 RELATED ID: AR_001000983.1 RELATED DB: TARGETDB DBREF 1WN0 A 1 145 UNP Q9SLX1 Q9SLX1_MAIZE 1 145 DBREF 1WN0 B 1 145 UNP Q9SLX1 Q9SLX1_MAIZE 1 145 DBREF 1WN0 C 1 145 UNP Q9SLX1 Q9SLX1_MAIZE 1 145 DBREF 1WN0 D 1 145 UNP Q9SLX1 Q9SLX1_MAIZE 1 145 SEQRES 1 A 145 MET ALA ALA ALA ALA LEU ARG GLU GLN LEU ASN ALA LEU SEQRES 2 A 145 LEU SER SER MET PHE ALA SER GLY LEU VAL ASP GLU GLN SEQRES 3 A 145 PHE GLN GLN LEU GLN MET LEU GLN GLU ASP GLY GLY THR SEQRES 4 A 145 PRO GLY PHE VAL ALA GLU VAL VAL THR LEU PHE CYS ASP SEQRES 5 A 145 ASP ALA ASP ARG ILE ILE SER GLU LEU ALA ALA LEU LEU SEQRES 6 A 145 ASP GLN PRO ILE VAL ASP PHE ASP LYS VAL ASP ALA TYR SEQRES 7 A 145 VAL HIS GLN LEU LYS GLY SER SER ALA SER VAL GLY ALA SEQRES 8 A 145 GLN LYS VAL LYS PHE THR CYS MET GLN PHE ARG GLN LEU SEQRES 9 A 145 CYS GLN ASP LYS ASN ARG ASP GLY CYS ILE MET ALA LEU SEQRES 10 A 145 ALA VAL VAL ARG ASN GLU PHE TYR ASP LEU ARG ASN LYS SEQRES 11 A 145 PHE GLN THR MET LEU GLN LEU GLU GLN GLN ILE GLN ALA SEQRES 12 A 145 GLN GLN SEQRES 1 B 145 MET ALA ALA ALA ALA LEU ARG GLU GLN LEU ASN ALA LEU SEQRES 2 B 145 LEU SER SER MET PHE ALA SER GLY LEU VAL ASP GLU GLN SEQRES 3 B 145 PHE GLN GLN LEU GLN MET LEU GLN GLU ASP GLY GLY THR SEQRES 4 B 145 PRO GLY PHE VAL ALA GLU VAL VAL THR LEU PHE CYS ASP SEQRES 5 B 145 ASP ALA ASP ARG ILE ILE SER GLU LEU ALA ALA LEU LEU SEQRES 6 B 145 ASP GLN PRO ILE VAL ASP PHE ASP LYS VAL ASP ALA TYR SEQRES 7 B 145 VAL HIS GLN LEU LYS GLY SER SER ALA SER VAL GLY ALA SEQRES 8 B 145 GLN LYS VAL LYS PHE THR CYS MET GLN PHE ARG GLN LEU SEQRES 9 B 145 CYS GLN ASP LYS ASN ARG ASP GLY CYS ILE MET ALA LEU SEQRES 10 B 145 ALA VAL VAL ARG ASN GLU PHE TYR ASP LEU ARG ASN LYS SEQRES 11 B 145 PHE GLN THR MET LEU GLN LEU GLU GLN GLN ILE GLN ALA SEQRES 12 B 145 GLN GLN SEQRES 1 C 145 MET ALA ALA ALA ALA LEU ARG GLU GLN LEU ASN ALA LEU SEQRES 2 C 145 LEU SER SER MET PHE ALA SER GLY LEU VAL ASP GLU GLN SEQRES 3 C 145 PHE GLN GLN LEU GLN MET LEU GLN GLU ASP GLY GLY THR SEQRES 4 C 145 PRO GLY PHE VAL ALA GLU VAL VAL THR LEU PHE CYS ASP SEQRES 5 C 145 ASP ALA ASP ARG ILE ILE SER GLU LEU ALA ALA LEU LEU SEQRES 6 C 145 ASP GLN PRO ILE VAL ASP PHE ASP LYS VAL ASP ALA TYR SEQRES 7 C 145 VAL HIS GLN LEU LYS GLY SER SER ALA SER VAL GLY ALA SEQRES 8 C 145 GLN LYS VAL LYS PHE THR CYS MET GLN PHE ARG GLN LEU SEQRES 9 C 145 CYS GLN ASP LYS ASN ARG ASP GLY CYS ILE MET ALA LEU SEQRES 10 C 145 ALA VAL VAL ARG ASN GLU PHE TYR ASP LEU ARG ASN LYS SEQRES 11 C 145 PHE GLN THR MET LEU GLN LEU GLU GLN GLN ILE GLN ALA SEQRES 12 C 145 GLN GLN SEQRES 1 D 145 MET ALA ALA ALA ALA LEU ARG GLU GLN LEU ASN ALA LEU SEQRES 2 D 145 LEU SER SER MET PHE ALA SER GLY LEU VAL ASP GLU GLN SEQRES 3 D 145 PHE GLN GLN LEU GLN MET LEU GLN GLU ASP GLY GLY THR SEQRES 4 D 145 PRO GLY PHE VAL ALA GLU VAL VAL THR LEU PHE CYS ASP SEQRES 5 D 145 ASP ALA ASP ARG ILE ILE SER GLU LEU ALA ALA LEU LEU SEQRES 6 D 145 ASP GLN PRO ILE VAL ASP PHE ASP LYS VAL ASP ALA TYR SEQRES 7 D 145 VAL HIS GLN LEU LYS GLY SER SER ALA SER VAL GLY ALA SEQRES 8 D 145 GLN LYS VAL LYS PHE THR CYS MET GLN PHE ARG GLN LEU SEQRES 9 D 145 CYS GLN ASP LYS ASN ARG ASP GLY CYS ILE MET ALA LEU SEQRES 10 D 145 ALA VAL VAL ARG ASN GLU PHE TYR ASP LEU ARG ASN LYS SEQRES 11 D 145 PHE GLN THR MET LEU GLN LEU GLU GLN GLN ILE GLN ALA SEQRES 12 D 145 GLN GLN FORMUL 5 HOH *103(H2 O) HELIX 1 1 GLN A 9 SER A 20 1 12 HELIX 2 2 ASP A 24 GLU A 35 1 12 HELIX 3 3 GLY A 41 LEU A 65 1 25 HELIX 4 4 ASP A 71 VAL A 89 1 19 HELIX 5 5 ALA A 91 GLN A 100 1 10 HELIX 6 6 GLN A 100 ASP A 107 1 8 HELIX 7 7 ASN A 109 GLN A 139 1 31 HELIX 8 8 ASN B 11 SER B 20 1 10 HELIX 9 9 ASP B 24 GLN B 34 1 11 HELIX 10 10 GLY B 41 LEU B 65 1 25 HELIX 11 11 ASP B 71 VAL B 89 1 19 HELIX 12 12 ALA B 91 GLN B 100 1 10 HELIX 13 13 GLN B 100 ASP B 107 1 8 HELIX 14 14 ASN B 109 GLU B 138 1 30 HELIX 15 15 ALA C 5 SER C 20 1 16 HELIX 16 16 ASP C 24 GLY C 37 1 14 HELIX 17 17 GLY C 41 LEU C 65 1 25 HELIX 18 18 ASP C 71 GLY C 90 1 20 HELIX 19 19 ALA C 91 ASP C 107 1 17 HELIX 20 20 ASN C 109 GLN C 142 1 34 HELIX 21 21 ALA D 5 SER D 20 1 16 HELIX 22 22 ASP D 24 GLY D 37 1 14 HELIX 23 23 GLY D 41 LEU D 65 1 25 HELIX 24 24 ASP D 71 VAL D 89 1 19 HELIX 25 25 ALA D 91 ASP D 107 1 17 HELIX 26 26 ASN D 109 GLN D 142 1 34 CRYST1 148.800 81.410 89.500 90.00 123.42 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006720 0.000000 0.004435 0.00000 SCALE2 0.000000 0.012284 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013387 0.00000