HEADER HYDROLASE 07-AUG-04 1WNO TITLE CRYSTAL STRUCTURE OF A NATIVE CHITINASE FROM ASPERGILLUS FUMIGATUS YJ- TITLE 2 407 CAVEAT 1WNO GLU A 139 HAS WRONG CHIRALITY AT ATOM CA TYR A 140 HAS WRONG CAVEAT 2 1WNO CHIRALITY AT ATOM CA ASP A 347 HAS WRONG CHIRALITY AT ATOM CAVEAT 3 1WNO CA TYR B 140 HAS WRONG CHIRALITY AT ATOM CA ASP B 347 HAS CAVEAT 4 1WNO WRONG CHIRALITY AT ATOM CA COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHITINASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.2.1.14 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS FUMIGATUS; SOURCE 3 ORGANISM_TAXID: 5085; SOURCE 4 STRAIN: YJ-407 KEYWDS EIGHT-STRANDED BETA/ALPHA-BARREL, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.HU,G.WANG,H.YANG,J.ZHOU,L.MO,K.YANG,C.JIN,C.JIN,Z.RAO REVDAT 5 13-MAR-24 1WNO 1 HETSYN REVDAT 4 29-JUL-20 1WNO 1 CAVEAT COMPND REMARK SEQADV REVDAT 4 2 1 HETNAM LINK SITE ATOM REVDAT 3 13-JUL-11 1WNO 1 VERSN REVDAT 2 24-FEB-09 1WNO 1 VERSN REVDAT 1 15-MAR-05 1WNO 0 JRNL AUTH H.HU,G.WANG,H.YANG,J.ZHOU,L.MO,K.YANG,C.JIN,C.JIN,Z.RAO JRNL TITL CRYSTAL STRUCTURE OF A NATIVE CHITINASE FROM ASPERGILLUS JRNL TITL 2 FUMIGATUS YJ-407 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH H.HU,G.WANG,H.YANG,J.ZHOU,L.MO,K.YANG,C.JIN,C.JIN,Z.RAO REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY CRYSTALLOGRAPHIC ANALYSIS OF REMARK 1 TITL 2 A NATIVE CHITINASE FROM THE FUNGAL PATHOGEN ASPERGILLUS REMARK 1 TITL 3 FUMIGATUS YJ-407. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 60 939 2004 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 15103145 REMARK 1 DOI 10.1107/S0907444904005190 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 127587 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 6252 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.23 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 72.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3040 REMARK 3 BIN FREE R VALUE : 0.3320 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 866 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.011 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6128 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 62 REMARK 3 SOLVENT ATOMS : 585 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM SIGMAA (A) : 0.33 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.33 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.900 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.00 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.710 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WNO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-AUG-04. REMARK 100 THE DEPOSITION ID IS D_1000023786. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-OCT-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BSRF REMARK 200 BEAMLINE : 3W1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.90 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 127587 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.14900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.50400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MAGNESIUM CHLORIDE, POLYETHYLENE REMARK 280 GLYCOL 3350, PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 47.83900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.14750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.23050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.14750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 47.83900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 50.23050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -101.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 395 REMARK 465 THR B 395 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 29 CG CD OE1 OE2 REMARK 470 GLU B 29 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ALA A 37 CA ALA A 37 CB 0.208 REMARK 500 PHE A 38 N PHE A 38 CA -0.165 REMARK 500 GLU A 139 CB GLU A 139 CG -0.203 REMARK 500 TYR A 140 C TYR A 140 O 0.120 REMARK 500 TYR A 140 C PRO A 141 N 0.136 REMARK 500 ASP A 347 CA ASP A 347 C -0.199 REMARK 500 ALA B 37 C ALA B 37 O 0.167 REMARK 500 PHE B 38 C PHE B 38 O 0.135 REMARK 500 TYR B 140 C TYR B 140 O 0.152 REMARK 500 TYR B 140 C PRO B 141 N 0.187 REMARK 500 PRO B 141 CD PRO B 141 N 0.095 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ALA A 37 CA - C - O ANGL. DEV. = 22.1 DEGREES REMARK 500 ALA A 37 CA - C - N ANGL. DEV. = -30.8 DEGREES REMARK 500 PHE A 38 C - N - CA ANGL. DEV. = 28.5 DEGREES REMARK 500 PHE A 38 N - CA - C ANGL. DEV. = 24.4 DEGREES REMARK 500 GLU A 139 CB - CA - C ANGL. DEV. = 13.2 DEGREES REMARK 500 GLU A 139 CA - C - N ANGL. DEV. = -14.9 DEGREES REMARK 500 TYR A 140 C - N - CA ANGL. DEV. = 22.5 DEGREES REMARK 500 TYR A 140 N - CA - C ANGL. DEV. = 31.4 DEGREES REMARK 500 PRO A 141 C - N - CA ANGL. DEV. = -11.6 DEGREES REMARK 500 PRO A 141 C - N - CD ANGL. DEV. = 12.7 DEGREES REMARK 500 TRP A 346 CA - CB - CG ANGL. DEV. = 11.8 DEGREES REMARK 500 TRP A 346 CA - C - N ANGL. DEV. = -20.1 DEGREES REMARK 500 TRP A 346 O - C - N ANGL. DEV. = 12.3 DEGREES REMARK 500 ASP A 347 C - N - CA ANGL. DEV. = 22.8 DEGREES REMARK 500 ASP A 347 CB - CA - C ANGL. DEV. = 15.0 DEGREES REMARK 500 ASP A 347 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP A 347 CB - CG - OD2 ANGL. DEV. = -9.4 DEGREES REMARK 500 ASP A 347 N - CA - C ANGL. DEV. = 21.3 DEGREES REMARK 500 PRO A 382 C - N - CA ANGL. DEV. = 10.1 DEGREES REMARK 500 ALA B 37 N - CA - C ANGL. DEV. = 16.4 DEGREES REMARK 500 ALA B 37 CA - C - N ANGL. DEV. = -24.4 DEGREES REMARK 500 ALA B 37 O - C - N ANGL. DEV. = 18.1 DEGREES REMARK 500 PHE B 38 C - N - CA ANGL. DEV. = 30.0 DEGREES REMARK 500 PHE B 38 CB - CG - CD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 PHE B 38 CB - CG - CD1 ANGL. DEV. = -4.5 DEGREES REMARK 500 PHE B 38 N - CA - C ANGL. DEV. = 22.5 DEGREES REMARK 500 GLU B 139 CA - C - N ANGL. DEV. = -13.2 DEGREES REMARK 500 TYR B 140 C - N - CA ANGL. DEV. = 30.5 DEGREES REMARK 500 TYR B 140 N - CA - C ANGL. DEV. = 25.0 DEGREES REMARK 500 TYR B 140 O - C - N ANGL. DEV. = 11.5 DEGREES REMARK 500 TRP B 346 CA - C - N ANGL. DEV. = -16.6 DEGREES REMARK 500 ASP B 347 C - N - CA ANGL. DEV. = 16.9 DEGREES REMARK 500 ASP B 347 CB - CA - C ANGL. DEV. = 12.1 DEGREES REMARK 500 ASP B 347 N - CA - C ANGL. DEV. = 18.1 DEGREES REMARK 500 PRO B 382 C - N - CA ANGL. DEV. = 9.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 17 -116.60 -91.94 REMARK 500 PHE A 38 120.58 44.79 REMARK 500 TYR A 74 -137.96 -128.00 REMARK 500 TYR A 140 111.93 92.44 REMARK 500 ALA A 221 27.75 -152.75 REMARK 500 ASN A 229 57.86 -148.01 REMARK 500 ASP A 347 110.57 96.94 REMARK 500 MET A 393 76.11 51.06 REMARK 500 TYR B 17 -111.83 -85.69 REMARK 500 PHE B 38 122.33 48.79 REMARK 500 TYR B 74 -129.01 -128.89 REMARK 500 ARG B 88 -9.02 -57.81 REMARK 500 ASP B 137 74.31 -109.24 REMARK 500 TYR B 140 112.59 72.29 REMARK 500 ALA B 221 22.12 -147.38 REMARK 500 ASN B 229 61.15 -152.74 REMARK 500 GLN B 280 -149.96 -78.53 REMARK 500 ASP B 347 108.30 91.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ASP A 347 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLU A 139 10.35 REMARK 500 TRP B 346 10.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B3439 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 110 O REMARK 620 2 ARG B 115 NH2 66.9 REMARK 620 N 1 DBREF 1WNO A 1 395 UNP Q870C0 Q870C0_ASPFU 39 433 DBREF 1WNO B 1 395 UNP Q870C0 Q870C0_ASPFU 39 433 SEQADV 1WNO TYR A 49 UNP Q870C0 HIS 87 CONFLICT SEQADV 1WNO TYR B 49 UNP Q870C0 HIS 87 CONFLICT SEQRES 1 A 395 ALA SER SER GLY TYR ARG SER VAL VAL TYR PHE VAL ASN SEQRES 2 A 395 TRP ALA ILE TYR GLY ARG ASN HIS ASN PRO GLN ASP LEU SEQRES 3 A 395 PRO VAL GLU ARG LEU THR HIS VAL LEU TYR ALA PHE ALA SEQRES 4 A 395 ASN VAL ARG PRO GLU THR GLY GLU VAL TYR MET THR ASP SEQRES 5 A 395 SER TRP ALA ASP ILE GLU LYS HIS TYR PRO GLY ASP SER SEQRES 6 A 395 TRP SER ASP THR GLY ASN ASN VAL TYR GLY CYS ILE LYS SEQRES 7 A 395 GLN LEU TYR LEU LEU LYS LYS GLN ASN ARG ASN LEU LYS SEQRES 8 A 395 VAL LEU LEU SER ILE GLY GLY TRP THR TYR SER PRO ASN SEQRES 9 A 395 PHE ALA PRO ALA ALA SER THR ASP ALA GLY ARG LYS ASN SEQRES 10 A 395 PHE ALA LYS THR ALA VAL LYS LEU LEU GLN ASP LEU GLY SEQRES 11 A 395 PHE ASP GLY LEU ASP ILE ASP TRP GLU TYR PRO GLU ASN SEQRES 12 A 395 ASP GLN GLN ALA ASN ASP PHE VAL LEU LEU LEU ARG GLU SEQRES 13 A 395 VAL ARG THR ALA LEU ASP SER TYR SER ALA ALA ASN ALA SEQRES 14 A 395 GLY GLY GLN HIS PHE LEU LEU THR VAL ALA SER PRO ALA SEQRES 15 A 395 GLY PRO ASP LYS ILE LYS VAL LEU HIS LEU LYS ASP MET SEQRES 16 A 395 ASP GLN GLN LEU ASP PHE TRP ASN LEU MET ALA TYR ASP SEQRES 17 A 395 TYR ALA GLY SER PHE SER SER LEU SER GLY HIS GLN ALA SEQRES 18 A 395 ASN VAL TYR ASN ASP THR SER ASN PRO LEU SER THR PRO SEQRES 19 A 395 PHE ASN THR GLN THR ALA LEU ASP LEU TYR ARG ALA GLY SEQRES 20 A 395 GLY VAL PRO ALA ASN LYS ILE VAL LEU GLY MET PRO LEU SEQRES 21 A 395 TYR GLY ARG SER PHE ALA ASN THR ASP GLY PRO GLY LYS SEQRES 22 A 395 PRO TYR ASN GLY VAL GLY GLN GLY SER TRP GLU ASN GLY SEQRES 23 A 395 VAL TRP ASP TYR LYS ALA LEU PRO GLN ALA GLY ALA THR SEQRES 24 A 395 GLU HIS VAL LEU PRO ASP ILE MET ALA SER TYR SER TYR SEQRES 25 A 395 ASP ALA THR ASN LYS PHE LEU ILE SER TYR ASP ASN PRO SEQRES 26 A 395 GLN VAL ALA ASN LEU LYS SER GLY TYR ILE LYS SER LEU SEQRES 27 A 395 GLY LEU GLY GLY ALA MET TRP TRP ASP SER SER SER ASP SEQRES 28 A 395 LYS THR GLY SER ASP SER LEU ILE THR THR VAL VAL ASN SEQRES 29 A 395 ALA LEU GLY GLY THR GLY VAL PHE GLU GLN SER GLN ASN SEQRES 30 A 395 GLU LEU ASP TYR PRO VAL SER GLN TYR ASP ASN LEU ARG SEQRES 31 A 395 ASN GLY MET GLN THR SEQRES 1 B 395 ALA SER SER GLY TYR ARG SER VAL VAL TYR PHE VAL ASN SEQRES 2 B 395 TRP ALA ILE TYR GLY ARG ASN HIS ASN PRO GLN ASP LEU SEQRES 3 B 395 PRO VAL GLU ARG LEU THR HIS VAL LEU TYR ALA PHE ALA SEQRES 4 B 395 ASN VAL ARG PRO GLU THR GLY GLU VAL TYR MET THR ASP SEQRES 5 B 395 SER TRP ALA ASP ILE GLU LYS HIS TYR PRO GLY ASP SER SEQRES 6 B 395 TRP SER ASP THR GLY ASN ASN VAL TYR GLY CYS ILE LYS SEQRES 7 B 395 GLN LEU TYR LEU LEU LYS LYS GLN ASN ARG ASN LEU LYS SEQRES 8 B 395 VAL LEU LEU SER ILE GLY GLY TRP THR TYR SER PRO ASN SEQRES 9 B 395 PHE ALA PRO ALA ALA SER THR ASP ALA GLY ARG LYS ASN SEQRES 10 B 395 PHE ALA LYS THR ALA VAL LYS LEU LEU GLN ASP LEU GLY SEQRES 11 B 395 PHE ASP GLY LEU ASP ILE ASP TRP GLU TYR PRO GLU ASN SEQRES 12 B 395 ASP GLN GLN ALA ASN ASP PHE VAL LEU LEU LEU ARG GLU SEQRES 13 B 395 VAL ARG THR ALA LEU ASP SER TYR SER ALA ALA ASN ALA SEQRES 14 B 395 GLY GLY GLN HIS PHE LEU LEU THR VAL ALA SER PRO ALA SEQRES 15 B 395 GLY PRO ASP LYS ILE LYS VAL LEU HIS LEU LYS ASP MET SEQRES 16 B 395 ASP GLN GLN LEU ASP PHE TRP ASN LEU MET ALA TYR ASP SEQRES 17 B 395 TYR ALA GLY SER PHE SER SER LEU SER GLY HIS GLN ALA SEQRES 18 B 395 ASN VAL TYR ASN ASP THR SER ASN PRO LEU SER THR PRO SEQRES 19 B 395 PHE ASN THR GLN THR ALA LEU ASP LEU TYR ARG ALA GLY SEQRES 20 B 395 GLY VAL PRO ALA ASN LYS ILE VAL LEU GLY MET PRO LEU SEQRES 21 B 395 TYR GLY ARG SER PHE ALA ASN THR ASP GLY PRO GLY LYS SEQRES 22 B 395 PRO TYR ASN GLY VAL GLY GLN GLY SER TRP GLU ASN GLY SEQRES 23 B 395 VAL TRP ASP TYR LYS ALA LEU PRO GLN ALA GLY ALA THR SEQRES 24 B 395 GLU HIS VAL LEU PRO ASP ILE MET ALA SER TYR SER TYR SEQRES 25 B 395 ASP ALA THR ASN LYS PHE LEU ILE SER TYR ASP ASN PRO SEQRES 26 B 395 GLN VAL ALA ASN LEU LYS SER GLY TYR ILE LYS SER LEU SEQRES 27 B 395 GLY LEU GLY GLY ALA MET TRP TRP ASP SER SER SER ASP SEQRES 28 B 395 LYS THR GLY SER ASP SER LEU ILE THR THR VAL VAL ASN SEQRES 29 B 395 ALA LEU GLY GLY THR GLY VAL PHE GLU GLN SER GLN ASN SEQRES 30 B 395 GLU LEU ASP TYR PRO VAL SER GLN TYR ASP ASN LEU ARG SEQRES 31 B 395 ASN GLY MET GLN THR HET NDG A1042 15 HET SO4 A1212 5 HET SO4 A1213 5 HET SO4 A1214 5 HET MG A1439 1 HET NAG B2042 15 HET SO4 B2212 5 HET SO4 B2213 5 HET SO4 B2214 5 HET MG B3439 1 HETNAM NDG 2-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE HETNAM SO4 SULFATE ION HETNAM MG MAGNESIUM ION HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NDG N-ACETYL-ALPHA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY- HETSYN 2 NDG ALPHA-D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2- HETSYN 3 NDG ACETAMIDO-2-DEOXY-GLUCOSE; 2-(ACETYLAMINO)-2-DEOXY-A- HETSYN 4 NDG D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NDG C8 H15 N O6 FORMUL 4 SO4 6(O4 S 2-) FORMUL 7 MG 2(MG 2+) FORMUL 8 NAG C8 H15 N O6 FORMUL 13 HOH *585(H2 O) HELIX 1 1 TRP A 14 TYR A 17 5 4 HELIX 2 2 ASN A 22 LEU A 26 5 5 HELIX 3 3 PRO A 27 LEU A 31 5 5 HELIX 4 4 ASP A 52 ILE A 57 1 6 HELIX 5 5 TYR A 74 ASN A 87 1 14 HELIX 6 6 TYR A 101 PRO A 103 5 3 HELIX 7 7 ASN A 104 ALA A 109 1 6 HELIX 8 8 THR A 111 GLY A 130 1 20 HELIX 9 9 ASN A 143 ALA A 169 1 27 HELIX 10 10 GLY A 183 LEU A 190 1 8 HELIX 11 11 HIS A 191 GLN A 197 1 7 HELIX 12 12 ASN A 229 THR A 233 5 5 HELIX 13 13 ASN A 236 GLY A 247 1 12 HELIX 14 14 PRO A 250 ASN A 252 5 3 HELIX 15 15 LYS A 291 LEU A 293 5 3 HELIX 16 16 ASN A 324 GLY A 339 1 16 HELIX 17 17 ASP A 347 ASP A 351 5 5 HELIX 18 18 THR A 353 ASP A 356 5 4 HELIX 19 19 SER A 357 GLY A 367 1 11 HELIX 20 20 GLY A 368 PHE A 372 5 5 HELIX 21 21 TYR A 386 ASN A 391 1 6 HELIX 22 22 TRP B 14 TYR B 17 5 4 HELIX 23 23 ASN B 22 LEU B 26 5 5 HELIX 24 24 PRO B 27 LEU B 31 5 5 HELIX 25 25 ASP B 52 GLU B 58 1 7 HELIX 26 26 TYR B 74 ASN B 87 1 14 HELIX 27 27 TYR B 101 PRO B 103 5 3 HELIX 28 28 ASN B 104 ALA B 109 1 6 HELIX 29 29 THR B 111 GLY B 130 1 20 HELIX 30 30 ASN B 143 ALA B 169 1 27 HELIX 31 31 GLY B 183 LEU B 190 1 8 HELIX 32 32 HIS B 191 GLN B 197 1 7 HELIX 33 33 ASN B 229 THR B 233 5 5 HELIX 34 34 ASN B 236 GLY B 247 1 12 HELIX 35 35 PRO B 250 ASN B 252 5 3 HELIX 36 36 LYS B 291 LEU B 293 5 3 HELIX 37 37 PRO B 304 MET B 307 5 4 HELIX 38 38 ASN B 324 GLY B 339 1 16 HELIX 39 39 ASP B 347 ASP B 351 5 5 HELIX 40 40 THR B 353 ASP B 356 5 4 HELIX 41 41 SER B 357 GLY B 367 1 11 HELIX 42 42 GLY B 368 PHE B 372 5 5 HELIX 43 43 TYR B 386 ASN B 391 1 6 SHEET 1 A10 VAL A 48 MET A 50 0 SHEET 2 A10 HIS A 33 VAL A 41 -1 N ASN A 40 O TYR A 49 SHEET 3 A10 LYS A 91 GLY A 97 1 O LEU A 93 N TYR A 36 SHEET 4 A10 GLY A 133 ASP A 137 1 O ASP A 135 N ILE A 96 SHEET 5 A10 LEU A 175 SER A 180 1 O THR A 177 N ILE A 136 SHEET 6 A10 PHE A 201 LEU A 204 1 O ASN A 203 N VAL A 178 SHEET 7 A10 ILE A 254 PRO A 259 1 O VAL A 255 N TRP A 202 SHEET 8 A10 GLY A 342 TRP A 346 1 O MET A 344 N MET A 258 SHEET 9 A10 ARG A 6 VAL A 12 1 N VAL A 8 O ALA A 343 SHEET 10 A10 HIS A 33 VAL A 41 1 O LEU A 35 N VAL A 9 SHEET 1 B 5 VAL A 287 ASP A 289 0 SHEET 2 B 5 TYR A 261 PHE A 265 -1 N GLY A 262 O TRP A 288 SHEET 3 B 5 PHE A 318 SER A 321 -1 O LEU A 319 N PHE A 265 SHEET 4 B 5 ALA A 308 ASP A 313 -1 N SER A 311 O ILE A 320 SHEET 5 B 5 THR A 299 LEU A 303 -1 N LEU A 303 O ALA A 308 SHEET 1 C10 VAL B 48 MET B 50 0 SHEET 2 C10 HIS B 33 VAL B 41 -1 N ASN B 40 O TYR B 49 SHEET 3 C10 LYS B 91 GLY B 97 1 O LEU B 93 N VAL B 34 SHEET 4 C10 GLY B 133 ASP B 137 1 O ASP B 135 N ILE B 96 SHEET 5 C10 LEU B 175 SER B 180 1 O THR B 177 N ILE B 136 SHEET 6 C10 PHE B 201 LEU B 204 1 O ASN B 203 N VAL B 178 SHEET 7 C10 ILE B 254 PRO B 259 1 O VAL B 255 N TRP B 202 SHEET 8 C10 GLY B 342 TRP B 346 1 O MET B 344 N MET B 258 SHEET 9 C10 ARG B 6 VAL B 12 1 N VAL B 8 O ALA B 343 SHEET 10 C10 HIS B 33 VAL B 41 1 O ALA B 37 N PHE B 11 SHEET 1 D 5 VAL B 287 ASP B 289 0 SHEET 2 D 5 TYR B 261 ALA B 266 -1 N GLY B 262 O TRP B 288 SHEET 3 D 5 PHE B 318 SER B 321 -1 O SER B 321 N ARG B 263 SHEET 4 D 5 ALA B 308 ASP B 313 -1 N SER B 311 O ILE B 320 SHEET 5 D 5 THR B 299 LEU B 303 -1 N LEU B 303 O ALA B 308 LINK O SER A 110 MG MG A1439 1555 1555 2.42 LINK O SER B 110 MG MG B3439 1555 1555 2.49 LINK NH2 ARG B 115 MG MG B3439 1555 1555 3.11 CISPEP 1 LEU A 293 PRO A 294 0 -0.44 CISPEP 2 LEU B 293 PRO B 294 0 -0.36 CRYST1 95.678 100.461 134.295 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010452 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009954 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007446 0.00000