HEADER CHAPERONE 09-AUG-04 1WNR TITLE CRYSTAL STRUCTURE OF THE CPN10 FROM THERMUS THERMOPHILUS HB8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 10 KDA CHAPERONIN; COMPND 3 CHAIN: A, B, C, D, E, F, G; COMPND 4 FRAGMENT: RESIDUES 1-94; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-11A KEYWDS CO-CHAPERONIN, PROTEIN CPN10, GROES, THERMUS THERMOPHILUS, RIKEN KEYWDS 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, STRUCTURAL KEYWDS 3 GENOMICS, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR N.NUMOTO,A.KITA,K.MIKI,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 2 INITIATIVE (RSGI) REVDAT 5 25-OCT-23 1WNR 1 SEQADV REVDAT 4 01-SEP-09 1WNR 1 AUTHOR REVDAT 3 24-FEB-09 1WNR 1 VERSN REVDAT 2 18-JAN-05 1WNR 1 JRNL REVDAT 1 07-DEC-04 1WNR 0 JRNL AUTH N.NUMOTO,A.KITA,K.MIKI JRNL TITL CRYSTAL STRUCTURE OF THE CO-CHAPERONIN CPN10 FROM THERMUS JRNL TITL 2 THERMOPHILUS HB8 JRNL REF PROTEINS V. 58 498 2005 JRNL REFN ISSN 0887-3585 JRNL PMID 15558581 JRNL DOI 10.1002/PROT.20317 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2609897.530 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 22805 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.253 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1148 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.008 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.00 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1839 REMARK 3 BIN R VALUE (WORKING SET) : 0.4180 REMARK 3 BIN FREE R VALUE : 0.4370 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 93 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.045 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4211 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -19.26000 REMARK 3 B22 (A**2) : -19.26000 REMARK 3 B33 (A**2) : 38.53000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.45 REMARK 3 ESD FROM SIGMAA (A) : 0.65 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.51 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.65 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.860 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.490 ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.700 ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : 2.110 ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.480 ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.34 REMARK 3 BSOL : 34.68 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WNR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-AUG-04. REMARK 100 THE DEPOSITION ID IS D_1000023789. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-03 REMARK 200 TEMPERATURE (KELVIN) : 90 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : ROTATED-INCLINED DOUBLE CRYSTAL REMARK 200 OPTICS : DOUBLE FOCUSING MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22805 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 14.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06900 REMARK 200 FOR THE DATA SET : 39.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.4 REMARK 200 DATA REDUNDANCY IN SHELL : 12.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.35800 REMARK 200 FOR SHELL : 5.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1HX5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 300, POTASSIUM CHLORIDE, MES-NAOH, REMARK 280 PH 6.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 96.44050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 96.44050 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.83100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 96.44050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 27.41550 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 96.44050 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 82.24650 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 96.44050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 82.24650 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 96.44050 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 27.41550 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 96.44050 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 96.44050 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 54.83100 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 96.44050 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 96.44050 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 54.83100 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 96.44050 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 82.24650 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 96.44050 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 27.41550 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 96.44050 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 27.41550 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 96.44050 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 82.24650 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 96.44050 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 96.44050 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 54.83100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEPTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEPTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 15 REMARK 465 GLU A 16 REMARK 465 GLU A 17 REMARK 465 PRO A 18 REMARK 465 LYS A 19 REMARK 465 THR A 20 REMARK 465 LYS A 21 REMARK 465 GLY A 22 REMARK 465 GLY A 23 REMARK 465 ILE A 24 REMARK 465 VAL A 25 REMARK 465 LEU A 26 REMARK 465 PRO A 27 REMARK 465 ASP A 28 REMARK 465 THR A 29 REMARK 465 ALA A 30 REMARK 465 LYS A 31 REMARK 465 GLU A 32 REMARK 465 LYS A 33 REMARK 465 GLU B 15 REMARK 465 GLU B 16 REMARK 465 GLU B 17 REMARK 465 PRO B 18 REMARK 465 LYS B 19 REMARK 465 THR B 20 REMARK 465 LYS B 21 REMARK 465 GLY B 22 REMARK 465 GLY B 23 REMARK 465 ILE B 24 REMARK 465 VAL B 25 REMARK 465 LEU B 26 REMARK 465 PRO B 27 REMARK 465 ASP B 28 REMARK 465 THR B 29 REMARK 465 ALA B 30 REMARK 465 LYS B 31 REMARK 465 GLU B 32 REMARK 465 LYS B 33 REMARK 465 GLU C 15 REMARK 465 GLU C 16 REMARK 465 GLU C 17 REMARK 465 PRO C 18 REMARK 465 LYS C 19 REMARK 465 THR C 20 REMARK 465 LYS C 21 REMARK 465 GLY C 22 REMARK 465 GLY C 23 REMARK 465 ILE C 24 REMARK 465 GLU D 15 REMARK 465 GLU D 16 REMARK 465 GLU D 17 REMARK 465 PRO D 18 REMARK 465 LYS D 19 REMARK 465 THR D 20 REMARK 465 LYS D 21 REMARK 465 GLY D 22 REMARK 465 GLY D 23 REMARK 465 ILE D 24 REMARK 465 VAL D 25 REMARK 465 LEU D 26 REMARK 465 PRO D 27 REMARK 465 ASP D 28 REMARK 465 THR D 29 REMARK 465 ALA D 30 REMARK 465 LYS D 31 REMARK 465 GLU D 32 REMARK 465 LYS D 33 REMARK 465 GLU E 15 REMARK 465 GLU E 16 REMARK 465 GLU E 17 REMARK 465 PRO E 18 REMARK 465 LYS E 19 REMARK 465 THR E 20 REMARK 465 LYS E 21 REMARK 465 GLY E 22 REMARK 465 GLY E 23 REMARK 465 ILE E 24 REMARK 465 VAL E 25 REMARK 465 LEU E 26 REMARK 465 PRO E 27 REMARK 465 ASP E 28 REMARK 465 THR E 29 REMARK 465 ALA E 30 REMARK 465 LYS E 31 REMARK 465 GLU E 32 REMARK 465 LYS E 33 REMARK 465 GLU F 15 REMARK 465 GLU F 16 REMARK 465 GLU F 17 REMARK 465 PRO F 18 REMARK 465 LYS F 19 REMARK 465 THR F 20 REMARK 465 LYS F 21 REMARK 465 GLY F 22 REMARK 465 GLY F 23 REMARK 465 ILE F 24 REMARK 465 VAL F 25 REMARK 465 LEU F 26 REMARK 465 PRO F 27 REMARK 465 ASP F 28 REMARK 465 THR F 29 REMARK 465 ALA F 30 REMARK 465 LYS F 31 REMARK 465 GLU F 32 REMARK 465 LYS F 33 REMARK 465 LEU G 26 REMARK 465 PRO G 27 REMARK 465 ASP G 28 REMARK 465 THR G 29 REMARK 465 ALA G 30 REMARK 465 LYS G 31 REMARK 465 GLU G 32 REMARK 465 LYS G 33 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CA GLY D 78 CA GLY D 78 8665 1.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO C 34 C - N - CA ANGL. DEV. = 12.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 7 45.38 -83.01 REMARK 500 TYR A 69 0.84 80.34 REMARK 500 ASP B 7 47.55 -80.22 REMARK 500 ASP C 7 50.36 -100.72 REMARK 500 LEU C 26 156.21 160.85 REMARK 500 GLU C 32 24.88 -67.51 REMARK 500 PRO C 34 162.47 -21.93 REMARK 500 ASP D 7 47.95 -89.22 REMARK 500 ASP D 62 141.07 -39.23 REMARK 500 ASP E 7 49.17 -85.40 REMARK 500 ASP F 7 47.82 -87.90 REMARK 500 ASP G 7 39.37 -87.54 REMARK 500 ILE G 24 72.21 -172.27 REMARK 500 TYR G 69 -9.89 76.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: TTK003000991.1 RELATED DB: TARGETDB DBREF 1WNR A 2 94 UNP P61493 CH10_THET8 9 101 DBREF 1WNR B 2 94 UNP P61493 CH10_THET8 9 101 DBREF 1WNR C 2 94 UNP P61493 CH10_THET8 9 101 DBREF 1WNR D 2 94 UNP P61493 CH10_THET8 9 101 DBREF 1WNR E 2 94 UNP P61493 CH10_THET8 9 101 DBREF 1WNR F 2 94 UNP P61493 CH10_THET8 9 101 DBREF 1WNR G 2 94 UNP P61493 CH10_THET8 9 101 SEQADV 1WNR MET A 1 UNP P61493 INITIATING METHIONINE SEQADV 1WNR MET B 1 UNP P61493 INITIATING METHIONINE SEQADV 1WNR MET C 1 UNP P61493 INITIATING METHIONINE SEQADV 1WNR MET D 1 UNP P61493 INITIATING METHIONINE SEQADV 1WNR MET E 1 UNP P61493 INITIATING METHIONINE SEQADV 1WNR MET F 1 UNP P61493 INITIATING METHIONINE SEQADV 1WNR MET G 1 UNP P61493 INITIATING METHIONINE SEQRES 1 A 94 MET ILE LYS PRO LEU GLY ASP ARG VAL VAL VAL LYS ARG SEQRES 2 A 94 ILE GLU GLU GLU PRO LYS THR LYS GLY GLY ILE VAL LEU SEQRES 3 A 94 PRO ASP THR ALA LYS GLU LYS PRO GLN LYS GLY LYS VAL SEQRES 4 A 94 ILE ALA VAL GLY THR GLY ARG VAL LEU GLU ASN GLY GLN SEQRES 5 A 94 ARG VAL PRO LEU GLU VAL LYS GLU GLY ASP ILE VAL VAL SEQRES 6 A 94 PHE ALA LYS TYR GLY GLY THR GLU ILE GLU ILE ASP GLY SEQRES 7 A 94 GLU GLU TYR VAL ILE LEU SER GLU ARG ASP LEU LEU ALA SEQRES 8 A 94 VAL LEU GLN SEQRES 1 B 94 MET ILE LYS PRO LEU GLY ASP ARG VAL VAL VAL LYS ARG SEQRES 2 B 94 ILE GLU GLU GLU PRO LYS THR LYS GLY GLY ILE VAL LEU SEQRES 3 B 94 PRO ASP THR ALA LYS GLU LYS PRO GLN LYS GLY LYS VAL SEQRES 4 B 94 ILE ALA VAL GLY THR GLY ARG VAL LEU GLU ASN GLY GLN SEQRES 5 B 94 ARG VAL PRO LEU GLU VAL LYS GLU GLY ASP ILE VAL VAL SEQRES 6 B 94 PHE ALA LYS TYR GLY GLY THR GLU ILE GLU ILE ASP GLY SEQRES 7 B 94 GLU GLU TYR VAL ILE LEU SER GLU ARG ASP LEU LEU ALA SEQRES 8 B 94 VAL LEU GLN SEQRES 1 C 94 MET ILE LYS PRO LEU GLY ASP ARG VAL VAL VAL LYS ARG SEQRES 2 C 94 ILE GLU GLU GLU PRO LYS THR LYS GLY GLY ILE VAL LEU SEQRES 3 C 94 PRO ASP THR ALA LYS GLU LYS PRO GLN LYS GLY LYS VAL SEQRES 4 C 94 ILE ALA VAL GLY THR GLY ARG VAL LEU GLU ASN GLY GLN SEQRES 5 C 94 ARG VAL PRO LEU GLU VAL LYS GLU GLY ASP ILE VAL VAL SEQRES 6 C 94 PHE ALA LYS TYR GLY GLY THR GLU ILE GLU ILE ASP GLY SEQRES 7 C 94 GLU GLU TYR VAL ILE LEU SER GLU ARG ASP LEU LEU ALA SEQRES 8 C 94 VAL LEU GLN SEQRES 1 D 94 MET ILE LYS PRO LEU GLY ASP ARG VAL VAL VAL LYS ARG SEQRES 2 D 94 ILE GLU GLU GLU PRO LYS THR LYS GLY GLY ILE VAL LEU SEQRES 3 D 94 PRO ASP THR ALA LYS GLU LYS PRO GLN LYS GLY LYS VAL SEQRES 4 D 94 ILE ALA VAL GLY THR GLY ARG VAL LEU GLU ASN GLY GLN SEQRES 5 D 94 ARG VAL PRO LEU GLU VAL LYS GLU GLY ASP ILE VAL VAL SEQRES 6 D 94 PHE ALA LYS TYR GLY GLY THR GLU ILE GLU ILE ASP GLY SEQRES 7 D 94 GLU GLU TYR VAL ILE LEU SER GLU ARG ASP LEU LEU ALA SEQRES 8 D 94 VAL LEU GLN SEQRES 1 E 94 MET ILE LYS PRO LEU GLY ASP ARG VAL VAL VAL LYS ARG SEQRES 2 E 94 ILE GLU GLU GLU PRO LYS THR LYS GLY GLY ILE VAL LEU SEQRES 3 E 94 PRO ASP THR ALA LYS GLU LYS PRO GLN LYS GLY LYS VAL SEQRES 4 E 94 ILE ALA VAL GLY THR GLY ARG VAL LEU GLU ASN GLY GLN SEQRES 5 E 94 ARG VAL PRO LEU GLU VAL LYS GLU GLY ASP ILE VAL VAL SEQRES 6 E 94 PHE ALA LYS TYR GLY GLY THR GLU ILE GLU ILE ASP GLY SEQRES 7 E 94 GLU GLU TYR VAL ILE LEU SER GLU ARG ASP LEU LEU ALA SEQRES 8 E 94 VAL LEU GLN SEQRES 1 F 94 MET ILE LYS PRO LEU GLY ASP ARG VAL VAL VAL LYS ARG SEQRES 2 F 94 ILE GLU GLU GLU PRO LYS THR LYS GLY GLY ILE VAL LEU SEQRES 3 F 94 PRO ASP THR ALA LYS GLU LYS PRO GLN LYS GLY LYS VAL SEQRES 4 F 94 ILE ALA VAL GLY THR GLY ARG VAL LEU GLU ASN GLY GLN SEQRES 5 F 94 ARG VAL PRO LEU GLU VAL LYS GLU GLY ASP ILE VAL VAL SEQRES 6 F 94 PHE ALA LYS TYR GLY GLY THR GLU ILE GLU ILE ASP GLY SEQRES 7 F 94 GLU GLU TYR VAL ILE LEU SER GLU ARG ASP LEU LEU ALA SEQRES 8 F 94 VAL LEU GLN SEQRES 1 G 94 MET ILE LYS PRO LEU GLY ASP ARG VAL VAL VAL LYS ARG SEQRES 2 G 94 ILE GLU GLU GLU PRO LYS THR LYS GLY GLY ILE VAL LEU SEQRES 3 G 94 PRO ASP THR ALA LYS GLU LYS PRO GLN LYS GLY LYS VAL SEQRES 4 G 94 ILE ALA VAL GLY THR GLY ARG VAL LEU GLU ASN GLY GLN SEQRES 5 G 94 ARG VAL PRO LEU GLU VAL LYS GLU GLY ASP ILE VAL VAL SEQRES 6 G 94 PHE ALA LYS TYR GLY GLY THR GLU ILE GLU ILE ASP GLY SEQRES 7 G 94 GLU GLU TYR VAL ILE LEU SER GLU ARG ASP LEU LEU ALA SEQRES 8 G 94 VAL LEU GLN HELIX 1 1 PRO C 27 GLU C 32 5 6 SHEET 1 A 7 ILE A 2 PRO A 4 0 SHEET 2 A 7 LEU G 89 LEU G 93 -1 O VAL G 92 N LYS A 3 SHEET 3 A 7 ILE G 63 PHE G 66 -1 N ILE G 63 O LEU G 93 SHEET 4 A 7 GLN G 35 VAL G 42 -1 N GLN G 35 O PHE G 66 SHEET 5 A 7 ARG G 8 ILE G 14 -1 N VAL G 10 O ALA G 41 SHEET 6 A 7 GLU G 79 SER G 85 -1 O VAL G 82 N VAL G 11 SHEET 7 A 7 THR G 72 ILE G 76 -1 N ILE G 76 O GLU G 79 SHEET 1 B 7 THR A 72 ILE A 76 0 SHEET 2 B 7 GLU A 79 SER A 85 -1 O GLU A 79 N ILE A 76 SHEET 3 B 7 ARG A 8 ARG A 13 -1 N VAL A 11 O VAL A 82 SHEET 4 B 7 GLN A 35 VAL A 42 -1 O ILE A 40 N VAL A 10 SHEET 5 B 7 ILE A 63 PHE A 66 -1 O PHE A 66 N GLN A 35 SHEET 6 B 7 LEU A 89 LEU A 93 -1 O LEU A 93 N ILE A 63 SHEET 7 B 7 ILE B 2 PRO B 4 -1 O LYS B 3 N VAL A 92 SHEET 1 C 2 ARG A 46 VAL A 47 0 SHEET 2 C 2 ARG A 53 VAL A 54 -1 O VAL A 54 N ARG A 46 SHEET 1 D 7 THR B 72 GLU B 75 0 SHEET 2 D 7 GLU B 80 SER B 85 -1 O ILE B 83 N THR B 72 SHEET 3 D 7 ARG B 8 ARG B 13 -1 N VAL B 9 O LEU B 84 SHEET 4 D 7 GLN B 35 VAL B 42 -1 O ILE B 40 N VAL B 10 SHEET 5 D 7 ILE B 63 PHE B 66 -1 O PHE B 66 N GLN B 35 SHEET 6 D 7 LEU B 89 LEU B 93 -1 O LEU B 93 N ILE B 63 SHEET 7 D 7 ILE C 2 PRO C 4 -1 O LYS C 3 N VAL B 92 SHEET 1 E 2 ARG B 46 VAL B 47 0 SHEET 2 E 2 ARG B 53 VAL B 54 -1 O VAL B 54 N ARG B 46 SHEET 1 F 7 THR C 72 ILE C 76 0 SHEET 2 F 7 GLU C 79 SER C 85 -1 O TYR C 81 N ILE C 74 SHEET 3 F 7 ARG C 8 ARG C 13 -1 N VAL C 11 O VAL C 82 SHEET 4 F 7 GLN C 35 VAL C 42 -1 O ILE C 40 N VAL C 10 SHEET 5 F 7 ILE C 63 PHE C 66 -1 O PHE C 66 N GLN C 35 SHEET 6 F 7 LEU C 89 LEU C 93 -1 O LEU C 93 N ILE C 63 SHEET 7 F 7 ILE D 2 PRO D 4 -1 O LYS D 3 N VAL C 92 SHEET 1 G 2 ARG C 46 VAL C 47 0 SHEET 2 G 2 ARG C 53 VAL C 54 -1 O VAL C 54 N ARG C 46 SHEET 1 H 7 THR D 72 ILE D 76 0 SHEET 2 H 7 GLU D 79 SER D 85 -1 O GLU D 79 N ILE D 76 SHEET 3 H 7 ARG D 8 ARG D 13 -1 N VAL D 9 O LEU D 84 SHEET 4 H 7 GLN D 35 VAL D 42 -1 O ALA D 41 N VAL D 10 SHEET 5 H 7 ILE D 63 PHE D 66 -1 O PHE D 66 N GLN D 35 SHEET 6 H 7 LEU D 89 LEU D 93 -1 O LEU D 93 N ILE D 63 SHEET 7 H 7 ILE E 2 PRO E 4 -1 O LYS E 3 N VAL D 92 SHEET 1 I 2 ARG D 46 VAL D 47 0 SHEET 2 I 2 ARG D 53 VAL D 54 -1 O VAL D 54 N ARG D 46 SHEET 1 J 7 THR E 72 ILE E 76 0 SHEET 2 J 7 GLU E 79 SER E 85 -1 O ILE E 83 N THR E 72 SHEET 3 J 7 ARG E 8 ARG E 13 -1 N VAL E 9 O LEU E 84 SHEET 4 J 7 GLN E 35 VAL E 42 -1 O ILE E 40 N VAL E 10 SHEET 5 J 7 ILE E 63 PHE E 66 -1 O PHE E 66 N GLN E 35 SHEET 6 J 7 LEU E 89 LEU E 93 -1 O LEU E 93 N ILE E 63 SHEET 7 J 7 ILE F 2 PRO F 4 -1 O LYS F 3 N VAL E 92 SHEET 1 K 2 ARG E 46 VAL E 47 0 SHEET 2 K 2 ARG E 53 VAL E 54 -1 O VAL E 54 N ARG E 46 SHEET 1 L 7 THR F 72 ILE F 76 0 SHEET 2 L 7 GLU F 79 SER F 85 -1 O GLU F 79 N ILE F 76 SHEET 3 L 7 ARG F 8 ARG F 13 -1 N VAL F 9 O LEU F 84 SHEET 4 L 7 GLN F 35 VAL F 42 -1 O LYS F 38 N LYS F 12 SHEET 5 L 7 ILE F 63 PHE F 66 -1 O PHE F 66 N GLN F 35 SHEET 6 L 7 LEU F 89 LEU F 93 -1 O LEU F 93 N ILE F 63 SHEET 7 L 7 ILE G 2 PRO G 4 -1 O LYS G 3 N VAL F 92 SHEET 1 M 2 ARG F 46 VAL F 47 0 SHEET 2 M 2 ARG F 53 VAL F 54 -1 O VAL F 54 N ARG F 46 SHEET 1 N 2 ARG G 46 VAL G 47 0 SHEET 2 N 2 ARG G 53 VAL G 54 -1 O VAL G 54 N ARG G 46 CRYST1 192.881 192.881 109.662 90.00 90.00 90.00 I 41 2 2 112 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005185 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005185 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009119 0.00000