HEADER HYDROLASE 02-SEP-04 1WPE OBSLTE 09-OCT-07 1WPE 2Z9R TITLE CRYSTAL STRUCTURE OF THE SR CALCIUM PUMP WITH BOUND ALUMINIUM TITLE 2 FLUORIDE, ADP AND CALCIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: SARCOPLASMIC/ENDOPLASMIC RETICULUM CALCIUM ATPASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CA2+-ATPASE, SERCA1; COMPND 5 EC: 3.6.3.8 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 3 ORGANISM_COMMON: RABBIT; SOURCE 4 TISSUE: SKELETAL MUSCLE (WHITE) KEYWDS MEMBRANE PROTEIN, P-TYPE ATPASE, HAD FOLD, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.TOYOSHIMA,H.NOMURA,T.TSUDA REVDAT 4 06-NOV-19 1WPE 1 JRNL REVDAT 3 09-OCT-07 1WPE 1 OBSLTE REVDAT 2 23-NOV-04 1WPE 1 JRNL REVDAT 1 05-OCT-04 1WPE 0 JRNL AUTH C.TOYOSHIMA,H.NOMURA,T.TSUDA JRNL TITL LUMENAL GATING MECHANISM REVEALED IN CALCIUM PUMP CRYSTAL JRNL TITL 2 STRUCTURES WITH PHOSPHATE ANALOGUES. JRNL REF NATURE V. 432 361 2004 JRNL REFN ESSN 1476-4687 JRNL PMID 15448704 JRNL DOI 10.1038/NATURE02981 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.TOYOSHIMA,M.NAKASAKO,H.NOMURA,H.OGAWA REMARK 1 TITL CRYSTAL STRUCTURE OF THE CALCIUM PUMP OF SARCOPLASMIC REMARK 1 TITL 2 RETICULUM AT 2.6 A RESOLUTION REMARK 1 REF NATURE V. 405 647 2000 REMARK 1 REFN ISSN 0028-0836 REMARK 1 PMID 10864310 REMARK 1 DOI 10.1038/35015017 REMARK 1 REFERENCE 2 REMARK 1 AUTH C.TOYOSHIMA,H.NOMURA REMARK 1 TITL STRUCTURAL CHANGES IN THE CALCIUM PUMP ACCOMPANYING THE REMARK 1 TITL 2 DISSOCIATION OF CALCIUM REMARK 1 REF NATURE V. 418 605 2002 REMARK 1 REFN ISSN 0028-0836 REMARK 1 PMID 12167844 REMARK 1 DOI 10.1038/NATURE00944 REMARK 1 REFERENCE 3 REMARK 1 AUTH C.TOYOSHIMA,T.MIZUTANI REMARK 1 TITL CRYSTAL STRUCTURE OF THE CALCIUM PUMP WITH A BOUND ATP REMARK 1 TITL 2 ANALOGUE REMARK 1 REF NATURE V. 430 529 2004 REMARK 1 REFN ISSN 0028-0836 REMARK 1 PMID 15229613 REMARK 1 DOI 10.1038/NATURE02680 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : 3.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 305870.770 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 80.8 REMARK 3 NUMBER OF REFLECTIONS : 38433 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.255 REMARK 3 FREE R VALUE : 0.290 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1926 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3506 REMARK 3 BIN R VALUE (WORKING SET) : 0.4210 REMARK 3 BIN FREE R VALUE : 0.4500 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 178 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.034 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7670 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 20 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 81.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 11.78500 REMARK 3 B22 (A**2) : -43.36900 REMARK 3 B33 (A**2) : 31.58500 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 11.27850 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.46 REMARK 3 ESD FROM SIGMAA (A) : 0.69 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.53 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.75 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.870 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.915 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.244 ; 2.500 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.274 ; 2.500 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.499 ; 3.000 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.25 REMARK 3 BSOL : 20.28 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ION.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WPE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-SEP-04. REMARK 100 THE DEPOSITION ID IS D_1000023847. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUN-03; 16-JUN-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0; NULL REMARK 200 PH : 6.10 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SPRING-8; SPRING-8 REMARK 200 BEAMLINE : BL44B2; BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.71; 0.75 REMARK 200 MONOCHROMATOR : ROTATED-INCLINED DOUBLE- REMARK 200 CRYSTAL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH; RIGAKU RAXIS V REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SCALEPACK, DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44884 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 45.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 200 DATA REDUNDANCY : 5.260 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.77 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.12 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.19100 REMARK 200 FOR SHELL : 2.560 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: P-DOMAIN AND M3-M10 TRANSMEMBRANE HELICES OF 1SU4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG400, AMMONIUM ACETATE, PH 6.10, REMARK 280 MICRODIALYSIS REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 81.54450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.50950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 81.54450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 37.50950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 AL AF3 A 998 O3B ADP A 1002 1.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 20 40.80 -70.90 REMARK 500 THR A 21 -26.65 -154.26 REMARK 500 LEU A 24 156.88 -46.77 REMARK 500 ALA A 43 89.58 -43.21 REMARK 500 GLU A 44 49.84 -76.64 REMARK 500 LYS A 47 -152.98 -99.70 REMARK 500 SER A 48 77.13 65.25 REMARK 500 GLU A 82 -88.59 -40.79 REMARK 500 GLU A 117 3.36 -68.46 REMARK 500 TYR A 122 -74.08 -52.65 REMARK 500 ARG A 143 1.36 -51.48 REMARK 500 VAL A 155 113.17 -33.42 REMARK 500 LYS A 169 41.09 -70.24 REMARK 500 ILE A 179 -19.33 -48.73 REMARK 500 LEU A 180 -77.43 -115.84 REMARK 500 ASP A 196 105.26 -52.00 REMARK 500 ALA A 199 155.32 -45.48 REMARK 500 GLN A 202 0.71 -66.81 REMARK 500 LYS A 205 29.65 -66.33 REMARK 500 ASN A 206 11.34 -143.52 REMARK 500 SER A 210 129.63 -39.61 REMARK 500 ALA A 224 -82.73 -78.64 REMARK 500 ILE A 235 34.53 -76.25 REMARK 500 ARG A 236 -176.08 -65.36 REMARK 500 ALA A 241 -153.56 -61.25 REMARK 500 THR A 242 -140.72 -151.20 REMARK 500 TRP A 272 -13.20 -49.51 REMARK 500 ILE A 274 7.51 -61.52 REMARK 500 ASN A 280 62.84 -115.34 REMARK 500 SER A 287 -171.98 -54.26 REMARK 500 ALA A 299 -70.42 -74.09 REMARK 500 ALA A 320 -17.29 -47.68 REMARK 500 ASN A 330 18.21 58.39 REMARK 500 SER A 338 -79.18 -40.46 REMARK 500 THR A 345 112.97 -34.46 REMARK 500 LYS A 352 -65.46 -93.48 REMARK 500 THR A 355 -78.62 -95.20 REMARK 500 GLN A 360 57.31 -107.33 REMARK 500 SER A 362 138.60 -170.76 REMARK 500 PRO A 391 33.12 -71.51 REMARK 500 ASP A 399 -2.69 75.42 REMARK 500 PRO A 401 92.86 -58.85 REMARK 500 CYS A 420 53.95 -97.35 REMARK 500 THR A 430 -70.45 -59.97 REMARK 500 ASN A 453 54.00 33.85 REMARK 500 ASN A 456 76.47 31.52 REMARK 500 GLU A 458 95.57 -68.70 REMARK 500 GLN A 477 -8.18 -52.80 REMARK 500 GLU A 482 -73.64 -53.02 REMARK 500 ARG A 489 -4.93 -53.92 REMARK 500 REMARK 500 THIS ENTRY HAS 96 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 529 0.12 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 995 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 305 O REMARK 620 2 ILE A 307 O 76.9 REMARK 620 3 GLU A 309 OE2 171.9 106.2 REMARK 620 4 ASN A 796 OD1 105.1 145.6 68.1 REMARK 620 5 ASP A 800 OD2 68.4 99.7 117.6 113.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 996 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 768 OD1 REMARK 620 2 GLU A 771 OE2 97.3 REMARK 620 3 THR A 799 OG1 163.4 89.4 REMARK 620 4 ASP A 800 OD1 85.4 154.5 82.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AF3 A 998 AL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 351 OD1 REMARK 620 2 AF3 A 998 F1 92.4 REMARK 620 3 AF3 A 998 F2 80.9 122.6 REMARK 620 4 AF3 A 998 F3 99.6 119.9 117.4 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1SU4 RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH BOUND CACLIUM REMARK 900 RELATED ID: 1IWO RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITHOUT CALCIUM REMARK 900 RELATED ID: 1VFP RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH BOUND AMPPCP AND CALCIUM REMARK 900 RELATED ID: 1WPG RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH MAGNESIUMTETRAFLUORIDE REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE C-TERMINAL RESIDUES IN SWS ENTRY P04191 REMARK 999 ARE FROM 994 TO 1001, DPEDERRK. REMARK 999 IN ISOFORM SERCA1A, THERE IS ONLY ONE C-TERMINAL REMARK 999 RESIDUE 994 G. DBREF 1WPE A 1 993 UNP P04191 AT2A1_RABIT 1 993 SEQADV 1WPE GLY A 994 UNP P04191 SEE REMARK 999 SEQRES 1 A 994 MET GLU ALA ALA HIS SER LYS SER THR GLU GLU CYS LEU SEQRES 2 A 994 ALA TYR PHE GLY VAL SER GLU THR THR GLY LEU THR PRO SEQRES 3 A 994 ASP GLN VAL LYS ARG HIS LEU GLU LYS TYR GLY HIS ASN SEQRES 4 A 994 GLU LEU PRO ALA GLU GLU GLY LYS SER LEU TRP GLU LEU SEQRES 5 A 994 VAL ILE GLU GLN PHE GLU ASP LEU LEU VAL ARG ILE LEU SEQRES 6 A 994 LEU LEU ALA ALA CYS ILE SER PHE VAL LEU ALA TRP PHE SEQRES 7 A 994 GLU GLU GLY GLU GLU THR ILE THR ALA PHE VAL GLU PRO SEQRES 8 A 994 PHE VAL ILE LEU LEU ILE LEU ILE ALA ASN ALA ILE VAL SEQRES 9 A 994 GLY VAL TRP GLN GLU ARG ASN ALA GLU ASN ALA ILE GLU SEQRES 10 A 994 ALA LEU LYS GLU TYR GLU PRO GLU MET GLY LYS VAL TYR SEQRES 11 A 994 ARG ALA ASP ARG LYS SER VAL GLN ARG ILE LYS ALA ARG SEQRES 12 A 994 ASP ILE VAL PRO GLY ASP ILE VAL GLU VAL ALA VAL GLY SEQRES 13 A 994 ASP LYS VAL PRO ALA ASP ILE ARG ILE LEU SER ILE LYS SEQRES 14 A 994 SER THR THR LEU ARG VAL ASP GLN SER ILE LEU THR GLY SEQRES 15 A 994 GLU SER VAL SER VAL ILE LYS HIS THR GLU PRO VAL PRO SEQRES 16 A 994 ASP PRO ARG ALA VAL ASN GLN ASP LYS LYS ASN MET LEU SEQRES 17 A 994 PHE SER GLY THR ASN ILE ALA ALA GLY LYS ALA LEU GLY SEQRES 18 A 994 ILE VAL ALA THR THR GLY VAL SER THR GLU ILE GLY LYS SEQRES 19 A 994 ILE ARG ASP GLN MET ALA ALA THR GLU GLN ASP LYS THR SEQRES 20 A 994 PRO LEU GLN GLN LYS LEU ASP GLU PHE GLY GLU GLN LEU SEQRES 21 A 994 SER LYS VAL ILE SER LEU ILE CYS VAL ALA VAL TRP LEU SEQRES 22 A 994 ILE ASN ILE GLY HIS PHE ASN ASP PRO VAL HIS GLY GLY SEQRES 23 A 994 SER TRP ILE ARG GLY ALA ILE TYR TYR PHE LYS ILE ALA SEQRES 24 A 994 VAL ALA LEU ALA VAL ALA ALA ILE PRO GLU GLY LEU PRO SEQRES 25 A 994 ALA VAL ILE THR THR CYS LEU ALA LEU GLY THR ARG ARG SEQRES 26 A 994 MET ALA LYS LYS ASN ALA ILE VAL ARG SER LEU PRO SER SEQRES 27 A 994 VAL GLU THR LEU GLY CYS THR SER VAL ILE CYS SER ASP SEQRES 28 A 994 LYS THR GLY THR LEU THR THR ASN GLN MET SER VAL CYS SEQRES 29 A 994 LYS MET PHE ILE ILE ASP LYS VAL ASP GLY ASP PHE CYS SEQRES 30 A 994 SER LEU ASN GLU PHE SER ILE THR GLY SER THR TYR ALA SEQRES 31 A 994 PRO GLU GLY GLU VAL LEU LYS ASN ASP LYS PRO ILE ARG SEQRES 32 A 994 SER GLY GLN PHE ASP GLY LEU VAL GLU LEU ALA THR ILE SEQRES 33 A 994 CYS ALA LEU CYS ASN ASP SER SER LEU ASP PHE ASN GLU SEQRES 34 A 994 THR LYS GLY VAL TYR GLU LYS VAL GLY GLU ALA THR GLU SEQRES 35 A 994 THR ALA LEU THR THR LEU VAL GLU LYS MET ASN VAL PHE SEQRES 36 A 994 ASN THR GLU VAL ARG ASN LEU SER LYS VAL GLU ARG ALA SEQRES 37 A 994 ASN ALA CYS ASN SER VAL ILE ARG GLN LEU MET LYS LYS SEQRES 38 A 994 GLU PHE THR LEU GLU PHE SER ARG ASP ARG LYS SER MET SEQRES 39 A 994 SER VAL TYR CYS SER PRO ALA LYS SER SER ARG ALA ALA SEQRES 40 A 994 VAL GLY ASN LYS MET PHE VAL LYS GLY ALA PRO GLU GLY SEQRES 41 A 994 VAL ILE ASP ARG CYS ASN TYR VAL ARG VAL GLY THR THR SEQRES 42 A 994 ARG VAL PRO MET THR GLY PRO VAL LYS GLU LYS ILE LEU SEQRES 43 A 994 SER VAL ILE LYS GLU TRP GLY THR GLY ARG ASP THR LEU SEQRES 44 A 994 ARG CYS LEU ALA LEU ALA THR ARG ASP THR PRO PRO LYS SEQRES 45 A 994 ARG GLU GLU MET VAL LEU ASP ASP SER SER ARG PHE MET SEQRES 46 A 994 GLU TYR GLU THR ASP LEU THR PHE VAL GLY VAL VAL GLY SEQRES 47 A 994 MET LEU ASP PRO PRO ARG LYS GLU VAL MET GLY SER ILE SEQRES 48 A 994 GLN LEU CYS ARG ASP ALA GLY ILE ARG VAL ILE MET ILE SEQRES 49 A 994 THR GLY ASP ASN LYS GLY THR ALA ILE ALA ILE CYS ARG SEQRES 50 A 994 ARG ILE GLY ILE PHE GLY GLU ASN GLU GLU VAL ALA ASP SEQRES 51 A 994 ARG ALA TYR THR GLY ARG GLU PHE ASP ASP LEU PRO LEU SEQRES 52 A 994 ALA GLU GLN ARG GLU ALA CYS ARG ARG ALA CYS CYS PHE SEQRES 53 A 994 ALA ARG VAL GLU PRO SER HIS LYS SER LYS ILE VAL GLU SEQRES 54 A 994 TYR LEU GLN SER TYR ASP GLU ILE THR ALA MET THR GLY SEQRES 55 A 994 ASP GLY VAL ASN ASP ALA PRO ALA LEU LYS LYS ALA GLU SEQRES 56 A 994 ILE GLY ILE ALA MET GLY SER GLY THR ALA VAL ALA LYS SEQRES 57 A 994 THR ALA SER GLU MET VAL LEU ALA ASP ASP ASN PHE SER SEQRES 58 A 994 THR ILE VAL ALA ALA VAL GLU GLU GLY ARG ALA ILE TYR SEQRES 59 A 994 ASN ASN MET LYS GLN PHE ILE ARG TYR LEU ILE SER SER SEQRES 60 A 994 ASN VAL GLY GLU VAL VAL CYS ILE PHE LEU THR ALA ALA SEQRES 61 A 994 LEU GLY LEU PRO GLU ALA LEU ILE PRO VAL GLN LEU LEU SEQRES 62 A 994 TRP VAL ASN LEU VAL THR ASP GLY LEU PRO ALA THR ALA SEQRES 63 A 994 LEU GLY PHE ASN PRO PRO ASP LEU ASP ILE MET ASP ARG SEQRES 64 A 994 PRO PRO ARG SER PRO LYS GLU PRO LEU ILE SER GLY TRP SEQRES 65 A 994 LEU PHE PHE ARG TYR MET ALA ILE GLY GLY TYR VAL GLY SEQRES 66 A 994 ALA ALA THR VAL GLY ALA ALA ALA TRP TRP PHE MET TYR SEQRES 67 A 994 ALA GLU ASP GLY PRO GLY VAL THR TYR HIS GLN LEU THR SEQRES 68 A 994 HIS PHE MET GLN CYS THR GLU ASP HIS PRO HIS PHE GLU SEQRES 69 A 994 GLY LEU ASP CYS GLU ILE PHE GLU ALA PRO GLU PRO MET SEQRES 70 A 994 THR MET ALA LEU SER VAL LEU VAL THR ILE GLU MET CYS SEQRES 71 A 994 ASN ALA LEU ASN SER LEU SER GLU ASN GLN SER LEU MET SEQRES 72 A 994 ARG MET PRO PRO TRP VAL ASN ILE TRP LEU LEU GLY SER SEQRES 73 A 994 ILE CYS LEU SER MET SER LEU HIS PHE LEU ILE LEU TYR SEQRES 74 A 994 VAL ASP PRO LEU PRO MET ILE PHE LYS LEU LYS ALA LEU SEQRES 75 A 994 ASP LEU THR GLN TRP LEU MET VAL LEU LYS ILE SER LEU SEQRES 76 A 994 PRO VAL ILE GLY LEU ASP GLU ILE LEU LYS PHE ILE ALA SEQRES 77 A 994 ARG ASN TYR LEU GLU GLY HET CA A 995 1 HET CA A 996 1 HET MG A 997 1 HET MG A1001 1 HET AF3 A 998 4 HET ADP A1002 27 HETNAM CA CALCIUM ION HETNAM MG MAGNESIUM ION HETNAM AF3 ALUMINUM FLUORIDE HETNAM ADP ADENOSINE-5'-DIPHOSPHATE FORMUL 2 CA 2(CA 2+) FORMUL 4 MG 2(MG 2+) FORMUL 6 AF3 AL F3 FORMUL 7 ADP C10 H15 N5 O10 P2 FORMUL 8 HOH *20(H2 O) HELIX 1 1 SER A 8 GLY A 17 1 10 HELIX 2 2 THR A 25 TYR A 36 1 12 HELIX 3 3 TRP A 50 GLU A 55 1 6 HELIX 4 4 GLN A 56 GLU A 58 5 3 HELIX 5 5 ASP A 59 PHE A 78 1 20 HELIX 6 6 THR A 84 ALA A 87 5 4 HELIX 7 7 PHE A 88 ILE A 94 1 7 HELIX 8 8 LEU A 95 GLU A 117 1 23 HELIX 9 9 ARG A 143 ILE A 145 5 3 HELIX 10 10 GLN A 177 GLY A 182 1 6 HELIX 11 11 VAL A 200 LYS A 204 5 5 HELIX 12 12 THR A 226 THR A 230 5 5 HELIX 13 13 THR A 247 ALA A 270 1 24 HELIX 14 14 ALA A 270 ASN A 275 1 6 HELIX 15 15 GLY A 277 ASP A 281 5 5 HELIX 16 16 ILE A 289 ILE A 307 1 19 HELIX 17 17 GLY A 310 LYS A 328 1 19 HELIX 18 18 LEU A 336 GLY A 343 1 8 HELIX 19 19 ARG A 403 GLN A 406 5 4 HELIX 20 20 PHE A 407 CYS A 420 1 14 HELIX 21 21 GLU A 439 ASN A 453 1 15 HELIX 22 22 SER A 463 ALA A 468 1 6 HELIX 23 23 ASN A 469 LEU A 478 1 10 HELIX 24 24 ALA A 517 ARG A 524 1 8 HELIX 25 25 THR A 538 GLY A 555 1 18 HELIX 26 26 LYS A 572 MET A 576 5 5 HELIX 27 27 ARG A 583 GLU A 588 1 6 HELIX 28 28 GLU A 606 ALA A 617 1 12 HELIX 29 29 ASN A 628 GLY A 640 1 13 HELIX 30 30 GLY A 655 LEU A 661 1 7 HELIX 31 31 PRO A 662 ALA A 673 1 12 HELIX 32 32 GLU A 680 TYR A 694 1 15 HELIX 33 33 ASP A 707 ALA A 714 1 8 HELIX 34 34 THR A 724 ALA A 730 1 7 HELIX 35 35 SER A 741 GLY A 782 1 42 HELIX 36 36 ILE A 788 ASP A 800 1 13 HELIX 37 37 GLY A 801 LEU A 807 1 7 HELIX 38 38 GLY A 808 ASN A 810 5 3 HELIX 39 39 SER A 830 TRP A 855 1 26 HELIX 40 40 HIS A 868 PHE A 873 5 6 HELIX 41 41 GLU A 889 GLU A 892 5 4 HELIX 42 42 ALA A 893 LEU A 913 1 21 HELIX 43 43 ASN A 930 VAL A 950 1 21 HELIX 44 44 ASP A 951 PHE A 957 1 7 HELIX 45 45 THR A 965 LEU A 975 1 11 HELIX 46 46 PRO A 976 TYR A 991 1 16 SHEET 1 A 6 GLN A 138 LYS A 141 0 SHEET 2 A 6 MET A 126 TYR A 130 -1 N GLY A 127 O ILE A 140 SHEET 3 A 6 ILE A 150 ALA A 154 -1 O GLU A 152 N LYS A 128 SHEET 4 A 6 LYS A 218 VAL A 223 -1 O GLY A 221 N VAL A 151 SHEET 5 A 6 ILE A 163 SER A 167 -1 N SER A 167 O LEU A 220 SHEET 6 A 6 MET A 207 LEU A 208 -1 O LEU A 208 N ILE A 163 SHEET 1 B 3 VAL A 187 ILE A 188 0 SHEET 2 B 3 ARG A 174 ASP A 176 -1 N VAL A 175 O VAL A 187 SHEET 3 B 3 ASN A 213 ALA A 216 -1 O ASN A 213 N ASP A 176 SHEET 1 C 8 ALA A 331 VAL A 333 0 SHEET 2 C 8 MET A 733 LEU A 735 -1 O VAL A 734 N ILE A 332 SHEET 3 C 8 ILE A 716 MET A 720 1 N ALA A 719 O LEU A 735 SHEET 4 C 8 THR A 698 GLY A 702 1 N MET A 700 O ILE A 718 SHEET 5 C 8 VAL A 347 SER A 350 1 N VAL A 347 O ALA A 699 SHEET 6 C 8 ARG A 620 ILE A 624 1 O ARG A 620 N ILE A 348 SHEET 7 C 8 CYS A 675 ALA A 677 1 O PHE A 676 N MET A 623 SHEET 8 C 8 ALA A 652 THR A 654 1 N TYR A 653 O CYS A 675 SHEET 1 D 9 LYS A 400 PRO A 401 0 SHEET 2 D 9 VAL A 395 LYS A 397 -1 N LYS A 397 O LYS A 400 SHEET 3 D 9 PHE A 376 ILE A 384 -1 N SER A 383 O LEU A 396 SHEET 4 D 9 VAL A 363 ASP A 373 -1 N ASP A 373 O PHE A 376 SHEET 5 D 9 LEU A 591 MET A 599 -1 O VAL A 596 N PHE A 367 SHEET 6 D 9 ARG A 560 ARG A 567 -1 N LEU A 564 O GLY A 595 SHEET 7 D 9 LYS A 511 GLY A 516 -1 N MET A 512 O ARG A 567 SHEET 8 D 9 SER A 493 PRO A 500 -1 N CYS A 498 O LYS A 511 SHEET 9 D 9 MET A 479 LEU A 485 -1 N LYS A 480 O SER A 499 SHEET 1 E 7 LYS A 400 PRO A 401 0 SHEET 2 E 7 VAL A 395 LYS A 397 -1 N LYS A 397 O LYS A 400 SHEET 3 E 7 PHE A 376 ILE A 384 -1 N SER A 383 O LEU A 396 SHEET 4 E 7 VAL A 363 ASP A 373 -1 N ASP A 373 O PHE A 376 SHEET 5 E 7 LEU A 591 MET A 599 -1 O VAL A 596 N PHE A 367 SHEET 6 E 7 CYS A 525 VAL A 528 1 N TYR A 527 O PHE A 593 SHEET 7 E 7 VAL A 535 PRO A 536 -1 O VAL A 535 N VAL A 528 SHEET 1 F 2 SER A 424 ASN A 428 0 SHEET 2 F 2 VAL A 433 VAL A 437 -1 O VAL A 433 N ASN A 428 SSBOND 1 CYS A 876 CYS A 888 1555 1555 2.03 LINK CA CA A 995 O ALA A 305 1555 1555 2.65 LINK CA CA A 995 O ILE A 307 1555 1555 2.54 LINK CA CA A 995 OE2 GLU A 309 1555 1555 2.38 LINK CA CA A 995 OD1 ASN A 796 1555 1555 2.37 LINK CA CA A 995 OD2 ASP A 800 1555 1555 2.43 LINK CA CA A 996 OD1 ASN A 768 1555 1555 2.40 LINK CA CA A 996 OE2 GLU A 771 1555 1555 2.26 LINK CA CA A 996 OG1 THR A 799 1555 1555 2.49 LINK CA CA A 996 OD1 ASP A 800 1555 1555 2.17 LINK MG MG A 997 OD1 ASP A 703 1555 1555 1.90 LINK AL AF3 A 998 OD1 ASP A 351 1555 1555 1.94 CRYST1 163.089 75.019 151.533 90.00 109.35 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006132 0.000000 0.002153 0.00000 SCALE2 0.000000 0.013330 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006994 0.00000