HEADER TRANSLATION 29-SEP-04 1WQG TITLE CRYSTAL STRUCTURE OF RIBOSOME RECYCLING FACTOR FROM MYCOBACTERIUM TITLE 2 TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOSOME RECYCLING FACTOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RIBOSOME RELEASING FACTOR, RRF; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET11 KEYWDS TRANSLATION FACTOR, TRIPLE-HELIX BUNDLE, PROTEIN SYNTHESIS, KEYWDS 2 TRANSLATION EXPDTA X-RAY DIFFRACTION AUTHOR K.SAIKRISHNAN,S.K.KALAPALA,U.VARSHNEY,M.VIJAYAN REVDAT 4 13-MAR-24 1WQG 1 REMARK LINK REVDAT 3 13-JUL-11 1WQG 1 VERSN REVDAT 2 24-FEB-09 1WQG 1 VERSN REVDAT 1 22-FEB-05 1WQG 0 JRNL AUTH K.SAIKRISHNAN,S.K.KALAPALA,U.VARSHNEY,M.VIJAYAN JRNL TITL X-RAY STRUCTURAL STUDIES OF MYCOBACTERIUM TUBERCULOSIS RRF JRNL TITL 2 AND A COMPARATIVE STUDY OF RRFS OF KNOWN STRUCTURE. JRNL TITL 3 MOLECULAR PLASTICITY AND BIOLOGICAL IMPLICATIONS JRNL REF J.MOL.BIOL. V. 345 29 2005 JRNL REFN ISSN 0022-2836 JRNL PMID 15567408 JRNL DOI 10.1016/J.JMB.2004.10.034 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.SAIKRISHNAN,S.K.KALAPALA,M.BIDYA SAGAR,A.R.RAO,U.VARSHNEY, REMARK 1 AUTH 2 M.VIJAYAN REMARK 1 TITL PURIFICATION, CRYSTALLIZATION AND PRELIMINARY X-RAY STUDIES REMARK 1 TITL 2 OF MYCOBACTERIUM TUBERCULOSIS RRF REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 60 368 2004 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 14747728 REMARK 1 DOI 10.1107/S0907444903027926 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 10230 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1121 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.21 REMARK 3 REFLECTION IN BIN (WORKING SET) : 610 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2810 REMARK 3 BIN FREE R VALUE SET COUNT : 76 REMARK 3 BIN FREE R VALUE : 0.3380 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1454 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 270 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.25000 REMARK 3 B22 (A**2) : -0.68000 REMARK 3 B33 (A**2) : 0.08000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.46000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.318 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.221 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.164 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.648 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.933 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.902 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1469 ; 0.012 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1387 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1978 ; 1.254 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3222 ; 1.068 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 183 ; 4.109 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 227 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1634 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 279 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 403 ; 0.228 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1728 ; 0.262 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 873 ; 0.080 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 131 ; 0.266 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 23 ; 0.244 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 58 ; 0.357 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 22 ; 0.226 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 916 ; 0.518 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1477 ; 0.962 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 553 ; 1.894 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 501 ; 3.290 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 29 REMARK 3 ORIGIN FOR THE GROUP (A): 27.9530 11.3785 34.3339 REMARK 3 T TENSOR REMARK 3 T11: 0.0677 T22: 0.0627 REMARK 3 T33: 0.0459 T12: 0.0099 REMARK 3 T13: 0.0265 T23: 0.0141 REMARK 3 L TENSOR REMARK 3 L11: 17.0071 L22: 4.8657 REMARK 3 L33: 20.0002 L12: 6.3142 REMARK 3 L13: 17.1878 L23: 7.6756 REMARK 3 S TENSOR REMARK 3 S11: 0.1234 S12: 0.1503 S13: -0.3833 REMARK 3 S21: 0.1594 S22: 0.2213 S23: -0.2330 REMARK 3 S31: 0.4130 S32: 0.4709 S33: -0.3446 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 103 A 148 REMARK 3 RESIDUE RANGE : A 1001 A 1002 REMARK 3 ORIGIN FOR THE GROUP (A): 26.9149 20.8861 35.7185 REMARK 3 T TENSOR REMARK 3 T11: 0.0784 T22: 0.1147 REMARK 3 T33: 0.0849 T12: -0.0039 REMARK 3 T13: 0.0082 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 2.2854 L22: 1.0118 REMARK 3 L33: 4.2407 L12: 0.7551 REMARK 3 L13: 2.6379 L23: 1.2157 REMARK 3 S TENSOR REMARK 3 S11: -0.2291 S12: -0.0170 S13: 0.1035 REMARK 3 S21: -0.0255 S22: 0.0557 S23: -0.0352 REMARK 3 S31: -0.3442 S32: 0.1643 S33: 0.1734 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 149 A 185 REMARK 3 ORIGIN FOR THE GROUP (A): 19.8980 15.4229 38.7043 REMARK 3 T TENSOR REMARK 3 T11: 0.0540 T22: 0.0102 REMARK 3 T33: 0.0603 T12: 0.0203 REMARK 3 T13: 0.0315 T23: 0.0087 REMARK 3 L TENSOR REMARK 3 L11: 9.4213 L22: 1.7143 REMARK 3 L33: 14.6214 L12: 1.8864 REMARK 3 L13: 9.8533 L23: 2.2965 REMARK 3 S TENSOR REMARK 3 S11: 0.1883 S12: -0.5662 S13: 0.0205 REMARK 3 S21: 0.1909 S22: -0.0990 S23: 0.0510 REMARK 3 S31: 0.3799 S32: -0.3058 S33: -0.0894 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 30 A 102 REMARK 3 ORIGIN FOR THE GROUP (A): 52.0964 8.6901 47.7929 REMARK 3 T TENSOR REMARK 3 T11: 0.2553 T22: 0.4199 REMARK 3 T33: 0.3362 T12: 0.0477 REMARK 3 T13: 0.0060 T23: 0.0096 REMARK 3 L TENSOR REMARK 3 L11: 3.3466 L22: 3.2379 REMARK 3 L33: 5.7065 L12: -0.6745 REMARK 3 L13: -3.7492 L23: 1.0128 REMARK 3 S TENSOR REMARK 3 S11: -0.3935 S12: -0.4696 S13: -0.2726 REMARK 3 S21: 0.4164 S22: 0.0321 S23: -0.1083 REMARK 3 S31: 0.3877 S32: 0.2876 S33: 0.3614 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1WQG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-SEP-04. REMARK 100 THE DEPOSITION ID IS D_1000023883. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-FEB-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11392 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.13500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, CADMIUM ACETATE, TRIS-HCL, REMARK 280 PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 16.69400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 43 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 31 72.51 55.43 REMARK 500 ALA A 96 -45.17 -134.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1001 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 10 OE2 REMARK 620 2 GLU A 14 OE1 94.8 REMARK 620 3 HOH A1198 O 93.5 81.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1002 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 108 OE1 REMARK 620 2 GLU A 108 OE2 53.1 REMARK 620 3 HOH A1129 O 87.1 140.2 REMARK 620 4 HOH A1170 O 133.1 80.4 138.9 REMARK 620 5 HOH A1197 O 140.5 116.0 93.9 51.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1003 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 165 NE2 REMARK 620 2 HOH A1166 O 84.5 REMARK 620 3 HOH A1172 O 96.0 123.6 REMARK 620 4 HOH A1269 O 114.5 158.3 47.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 1003 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1WQF RELATED DB: PDB REMARK 900 THE SAME PROTEIN AT 2.65 ANGSTROM REMARK 900 RELATED ID: 1WQH RELATED DB: PDB REMARK 900 THE SAME PROTEIN AT 2.90 ANGSTROM DBREF 1WQG A 1 185 UNP P66734 RRF_MYCTU 1 185 SEQRES 1 A 185 MET ILE ASP GLU ALA LEU PHE ASP ALA GLU GLU LYS MET SEQRES 2 A 185 GLU LYS ALA VAL ALA VAL ALA ARG ASP ASP LEU SER THR SEQRES 3 A 185 ILE ARG THR GLY ARG ALA ASN PRO GLY MET PHE SER ARG SEQRES 4 A 185 ILE THR ILE ASP TYR TYR GLY ALA ALA THR PRO ILE THR SEQRES 5 A 185 GLN LEU ALA SER ILE ASN VAL PRO GLU ALA ARG LEU VAL SEQRES 6 A 185 VAL ILE LYS PRO TYR GLU ALA ASN GLN LEU ARG ALA ILE SEQRES 7 A 185 GLU THR ALA ILE ARG ASN SER ASP LEU GLY VAL ASN PRO SEQRES 8 A 185 THR ASN ASP GLY ALA LEU ILE ARG VAL ALA VAL PRO GLN SEQRES 9 A 185 LEU THR GLU GLU ARG ARG ARG GLU LEU VAL LYS GLN ALA SEQRES 10 A 185 LYS HIS LYS GLY GLU GLU ALA LYS VAL SER VAL ARG ASN SEQRES 11 A 185 ILE ARG ARG LYS ALA MET GLU GLU LEU HIS ARG ILE ARG SEQRES 12 A 185 LYS GLU GLY GLU ALA GLY GLU ASP GLU VAL GLY ARG ALA SEQRES 13 A 185 GLU LYS ASP LEU ASP LYS THR THR HIS GLN TYR VAL THR SEQRES 14 A 185 GLN ILE ASP GLU LEU VAL LYS HIS LYS GLU GLY GLU LEU SEQRES 15 A 185 LEU GLU VAL HET CD A1001 1 HET CD A1002 1 HET CD A1003 1 HETNAM CD CADMIUM ION FORMUL 2 CD 3(CD 2+) FORMUL 5 HOH *270(H2 O) HELIX 1 1 ILE A 2 THR A 26 1 25 HELIX 2 2 ASN A 33 SER A 38 5 6 HELIX 3 3 GLU A 71 ASN A 73 5 3 HELIX 4 4 GLN A 74 SER A 85 1 12 HELIX 5 5 THR A 106 GLU A 145 1 40 HELIX 6 6 GLY A 149 VAL A 185 1 37 SHEET 1 A 2 THR A 41 TYR A 44 0 SHEET 2 A 2 ALA A 47 PRO A 50 -1 O THR A 49 N ILE A 42 SHEET 1 B 4 ALA A 55 GLU A 61 0 SHEET 2 B 4 LEU A 64 PRO A 69 -1 O VAL A 66 N ASN A 58 SHEET 3 B 4 ILE A 98 ALA A 101 -1 O VAL A 100 N VAL A 65 SHEET 4 B 4 THR A 92 ASN A 93 -1 N THR A 92 O ARG A 99 LINK OE2 GLU A 10 CD CD A1001 1555 1555 2.32 LINK OE1 GLU A 14 CD CD A1001 1555 1555 2.22 LINK OE1 GLU A 108 CD CD A1002 1555 1555 2.55 LINK OE2 GLU A 108 CD CD A1002 1555 1555 2.30 LINK NE2 HIS A 165 CD CD A1003 1555 1555 2.35 LINK CD CD A1001 O HOH A1198 1555 1555 2.24 LINK CD CD A1002 O HOH A1129 1555 1555 2.77 LINK CD CD A1002 O HOH A1170 1555 1555 2.48 LINK CD CD A1002 O HOH A1197 1555 1555 2.86 LINK CD CD A1003 O HOH A1166 1555 1555 2.55 LINK CD CD A1003 O HOH A1172 1555 1555 3.06 LINK CD CD A1003 O HOH A1269 1555 1555 2.81 SITE 1 AC1 3 GLU A 10 GLU A 14 HOH A1198 SITE 1 AC2 4 GLU A 108 HOH A1129 HOH A1170 HOH A1197 SITE 1 AC3 4 HIS A 165 HOH A1166 HOH A1172 HOH A1269 CRYST1 55.499 33.388 61.368 90.00 112.42 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018018 0.000000 0.007433 0.00000 SCALE2 0.000000 0.029951 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017627 0.00000