HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 29-SEP-04 1WQI OBSLTE 14-NOV-06 1WQI 2E1O TITLE SOLUTION STRUCTURE OF RSGI RUH-028, A HOMEOBOX DOMAIN FROM TITLE 2 HUMAN CDNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: HOMEOBOX PROTEIN PRH; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HOMEOBOX; COMPND 5 SYNONYM: HEMATOPOIETICALLY EXPRESSED HOMEOBOX, HOMEOBOX COMPND 6 PROTEIN HEX; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 GENE: BC050638; SOURCE 5 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: P040315-39; SOURCE 7 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS (E. COLI) KEYWDS DNA-BINDING PROTEIN, HELIX-TURN-HELIX, TRANSCRIPTIONAL KEYWDS 2 REGULATORY FACTOR, STRUCTURAL GENOMICS, RIKEN STRUCTURAL KEYWDS 3 GENOMICS/PROTEOMICS INITIATIVE, RSGI, NPPSFA, NATIONAL KEYWDS 4 PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES EXPDTA NMR, 20 STRUCTURES AUTHOR A.NAKAMURA,T.ABE,N.NAMEKI,N.TOCHIO,S.KOSHIBA,T.KIGAWA, AUTHOR 2 S.YOKOYAMA,S.KAWAII,H.HIROTA,RIKEN STRUCTURAL AUTHOR 3 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 2 14-NOV-06 1WQI 1 OBSLTE REVDAT 1 29-MAR-05 1WQI 0 JRNL AUTH A.NAKAMURA,T.ABE,N.NAMEKI,N.TOCHIO,S.KOSHIBA, JRNL AUTH 2 T.KIGAWA,S.YOKOYAMA,S.KAWAII,H.HIROTA JRNL TITL SOLUTION STRUCTURE OF RSGI RUH-028, A HOMEOBOX JRNL TITL 2 DOMAIN FROM HUMAN CDNA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 1.0.8 REMARK 3 AUTHORS : GUENTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WQI COMPLIES WITH FORMAT V. 3.0, 1-DEC-2006 REMARK 4 REMARK 4 THIS FILE IS A TEST VERSION. REMARK 4 REMARK 4 THIS IS THE REMEDIATED VERSION OF THIS PDB ENTRY. REMARK 4 REMEDIATED DATA FILE REVISION 3.100 (2007-05-01) REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-SEP-2004. REMARK 100 THE RCSB ID CODE IS RCSB023885. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 100MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.92MM RSGI RUH-028 U-15N, REMARK 210 13C, 20MM D-TRIS-HCL(PH7.0), REMARK 210 100MM NACL, 1MM D-DDT, 0.02% REMARK 210 NAN3, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.6, NMRPIPE REMARK 210 2003.316.09.03, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9046 REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH ACCEPTABLE REMARK 210 COVALENT GEOMETRY, STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS, STRUCTURES WITH REMARK 210 THE LOWEST ENERGY, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 5 157.18 63.81 REMARK 500 2 SER A 69 -77.43 69.80 REMARK 500 5 SER A 2 -58.84 74.77 REMARK 500 5 SER A 3 168.54 55.88 REMARK 500 8 SER A 6 -90.43 63.76 REMARK 500 9 SER A 6 132.39 64.32 REMARK 500 10 SER A 2 158.76 60.14 REMARK 500 10 SER A 69 165.95 64.26 REMARK 500 11 SER A 6 159.06 63.18 REMARK 500 12 SER A 3 166.89 64.47 REMARK 500 13 SER A 5 -83.73 68.12 REMARK 500 15 SER A 3 153.87 63.39 REMARK 500 15 SER A 69 128.69 63.07 REMARK 500 18 LYS A 8 -74.87 66.32 REMARK 500 20 PHE A 14 168.29 54.81 REMARK 500 20 SER A 69 164.29 67.61 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSS001000069.1 RELATED DB: TARGETDB DBREF 1WQI A 8 64 UNP Q03014 HHEX_HUMAN 138 194 SEQADV 1WQI GLY A 1 UNP Q03014 CLONING ARTIFACT SEQADV 1WQI SER A 2 UNP Q03014 CLONING ARTIFACT SEQADV 1WQI SER A 3 UNP Q03014 CLONING ARTIFACT SEQADV 1WQI GLY A 4 UNP Q03014 CLONING ARTIFACT SEQADV 1WQI SER A 5 UNP Q03014 CLONING ARTIFACT SEQADV 1WQI SER A 6 UNP Q03014 CLONING ARTIFACT SEQADV 1WQI GLY A 7 UNP Q03014 CLONING ARTIFACT SEQADV 1WQI SER A 65 UNP Q03014 CLONING ARTIFACT SEQADV 1WQI GLY A 66 UNP Q03014 CLONING ARTIFACT SEQADV 1WQI PRO A 67 UNP Q03014 CLONING ARTIFACT SEQADV 1WQI SER A 68 UNP Q03014 CLONING ARTIFACT SEQADV 1WQI SER A 69 UNP Q03014 CLONING ARTIFACT SEQADV 1WQI GLY A 70 UNP Q03014 CLONING ARTIFACT SEQRES 1 A 70 GLY SER SER GLY SER SER GLY LYS GLY GLY GLN VAL ARG SEQRES 2 A 70 PHE SER ASN ASP GLN THR ILE GLU LEU GLU LYS LYS PHE SEQRES 3 A 70 GLU THR GLN LYS TYR LEU SER PRO PRO GLU ARG LYS ARG SEQRES 4 A 70 LEU ALA LYS MET LEU GLN LEU SER GLU ARG GLN VAL LYS SEQRES 5 A 70 THR TRP PHE GLN ASN ARG ARG ALA LYS TRP ARG ARG SER SEQRES 6 A 70 GLY PRO SER SER GLY HELIX 1 1 SER A 15 GLN A 29 1 15 HELIX 2 2 SER A 33 GLN A 45 1 13 HELIX 3 3 ARG A 49 GLY A 66 1 18 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1