HEADER OXIDOREDUCTASE 29-OCT-04 1WS3 TITLE URATE OXIDASE FROM ASPERGILLUS FLAVUS COMPLEXED WITH URACIL COMPND MOL_ID: 1; COMPND 2 MOLECULE: URICASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: URATE OXIDASE; COMPND 5 EC: 1.7.3.3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS FLAVUS; SOURCE 3 ORGANISM_TAXID: 5059; SOURCE 4 EXPRESSION_SYSTEM: SACCHAROMYCES CEREVISIAE; SOURCE 5 EXPRESSION_SYSTEM_COMMON: BAKER'S YEAST; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 4932 KEYWDS OXIDOREDUCTASE, URIC ACID DEGRADATION, DIMERIC BARREL, TUNNEL-SHAPED KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.RETAILLEAU,N.COLLOC'H,D.VIVARES,F.BONNETE,B.CASTRO,M.EL HAJJI, AUTHOR 2 T.PRANGE REVDAT 4 25-OCT-23 1WS3 1 REMARK SEQADV LINK REVDAT 3 28-FEB-18 1WS3 1 AUTHOR JRNL REVDAT 2 24-FEB-09 1WS3 1 VERSN REVDAT 1 22-MAR-05 1WS3 0 JRNL AUTH P.RETAILLEAU,N.COLLOC'H,D.VIVARES,F.BONNETE,B.CASTRO, JRNL AUTH 2 M.EL HAJJI,T.PRANGE JRNL TITL URATE OXIDASE FROM ASPERGILLUS FLAVUS: NEW CRYSTAL-PACKING JRNL TITL 2 CONTACTS IN RELATION TO THE CONTENT OF THE ACTIVE SITE. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 61 218 2005 JRNL REFN ISSN 0907-4449 JRNL PMID 15735331 JRNL DOI 10.1107/S0907444904031531 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH N.COLLOC'H,M.EL HAJJI,B.BACHET,G.L'HERMITE,M.SCHILTZ, REMARK 1 AUTH 2 B.CASTRO,J.P.MORNON REMARK 1 TITL CRYSTAL STRUCTURE OF THE PROTEIN DRUG URATE REMARK 1 TITL 2 OXIDASE-INHIBITOR COMPLEX AT 2.05 A RESOLUTION REMARK 1 REF NAT.STRUCT.BIOL. V. 4 947 1997 REMARK 1 REFN ISSN 1072-8368 REMARK 1 PMID 9360612 REMARK 1 DOI 10.1038/NSB1197-947 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 28896 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2885 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9475 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : NULL ; NULL ; NULL REMARK 3 BOND ANGLES : NULL ; NULL ; NULL REMARK 3 TORSION ANGLES : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS : NULL ; NULL ; NULL REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : NULL ; NULL ; NULL REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : NULL ; NULL ; NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.23 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : NULL REMARK 3 OTHER TORSION ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WS3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-NOV-04. REMARK 100 THE DEPOSITION ID IS D_1000023933. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-OCT-03 REMARK 200 TEMPERATURE (KELVIN) : 291.0 REMARK 200 PH : 8.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LURE REMARK 200 BEAMLINE : DW32 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.972 REMARK 200 MONOCHROMATOR : SI (111) REMARK 200 OPTICS : CURVATED MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28902 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 36.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1R51 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 8.00, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.35867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 100.71733 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 100.71733 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 50.35867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICALLY HOMOTETRAMERIC ASEMBLY CORRESPONDS TO THE REMARK 300 ASYMMETRIC UNIT CONTENT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 24440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 44960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -94.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 297 REMARK 465 LYS A 298 REMARK 465 SER A 299 REMARK 465 LYS A 300 REMARK 465 LEU A 301 REMARK 465 LEU B 297 REMARK 465 LYS B 298 REMARK 465 SER B 299 REMARK 465 LYS B 300 REMARK 465 LEU B 301 REMARK 465 LYS C 300 REMARK 465 LEU C 301 REMARK 465 LEU D 297 REMARK 465 LYS D 298 REMARK 465 SER D 299 REMARK 465 LYS D 300 REMARK 465 LEU D 301 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 296 CA C O CB OG REMARK 470 SER B 296 CA C O CB OG REMARK 470 SER C 299 CA C O CB OG REMARK 470 SER D 296 CA C O CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 117 C - N - CD ANGL. DEV. = -12.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 23 -72.89 -64.54 REMARK 500 HIS A 118 31.78 -151.38 REMARK 500 SER A 124 147.92 174.89 REMARK 500 VAL A 201 -53.36 -29.86 REMARK 500 CYS A 290 140.32 -179.34 REMARK 500 ALA B 6 135.22 -170.19 REMARK 500 LYS B 23 -82.33 -58.40 REMARK 500 HIS B 118 36.12 -144.01 REMARK 500 SER B 124 156.72 173.51 REMARK 500 ASP B 165 -159.77 -141.31 REMARK 500 THR B 169 -18.18 -144.80 REMARK 500 PHE B 204 -70.79 -66.75 REMARK 500 ASN B 223 79.68 -104.07 REMARK 500 CYS B 290 140.19 -175.99 REMARK 500 ALA C 6 125.06 -174.43 REMARK 500 LYS C 23 -81.48 -63.73 REMARK 500 HIS C 118 24.29 -150.27 REMARK 500 SER C 124 155.78 165.40 REMARK 500 LYS C 138 3.40 -151.35 REMARK 500 ASP C 165 -159.57 -151.73 REMARK 500 PHE C 204 -74.70 -55.85 REMARK 500 GLU C 276 -36.51 -137.29 REMARK 500 CYS C 290 140.12 -176.53 REMARK 500 LYS D 23 -73.25 -63.06 REMARK 500 ASP D 112 7.17 80.90 REMARK 500 HIS D 118 25.72 -143.44 REMARK 500 SER D 124 147.23 161.95 REMARK 500 ASN D 156 40.72 72.40 REMARK 500 ASP D 165 -158.84 -138.55 REMARK 500 ASP D 175 110.83 -160.70 REMARK 500 CYS D 290 134.53 -178.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 SAC B 1 10.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE URA A 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE URA B 1900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE URA C 2900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE URA D 3900 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1R51 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH 8-AZAXANTHIN REMARK 900 RELATED ID: 1WS2 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH 5,6-DIAMINOURACIL DBREF 1WS3 A 1 301 UNP Q00511 URIC_ASPFL 1 301 DBREF 1WS3 B 1 301 UNP Q00511 URIC_ASPFL 1 301 DBREF 1WS3 C 1 301 UNP Q00511 URIC_ASPFL 1 301 DBREF 1WS3 D 1 301 UNP Q00511 URIC_ASPFL 1 301 SEQADV 1WS3 SAC A 1 UNP Q00511 SER 1 MODIFIED RESIDUE SEQADV 1WS3 SAC B 1 UNP Q00511 SER 1 MODIFIED RESIDUE SEQADV 1WS3 SAC C 1 UNP Q00511 SER 1 MODIFIED RESIDUE SEQADV 1WS3 SAC D 1 UNP Q00511 SER 1 MODIFIED RESIDUE SEQRES 1 A 301 SAC ALA VAL LYS ALA ALA ARG TYR GLY LYS ASP ASN VAL SEQRES 2 A 301 ARG VAL TYR LYS VAL HIS LYS ASP GLU LYS THR GLY VAL SEQRES 3 A 301 GLN THR VAL TYR GLU MET THR VAL CYS VAL LEU LEU GLU SEQRES 4 A 301 GLY GLU ILE GLU THR SER TYR THR LYS ALA ASP ASN SER SEQRES 5 A 301 VAL ILE VAL ALA THR ASP SER ILE LYS ASN THR ILE TYR SEQRES 6 A 301 ILE THR ALA LYS GLN ASN PRO VAL THR PRO PRO GLU LEU SEQRES 7 A 301 PHE GLY SER ILE LEU GLY THR HIS PHE ILE GLU LYS TYR SEQRES 8 A 301 ASN HIS ILE HIS ALA ALA HIS VAL ASN ILE VAL CYS HIS SEQRES 9 A 301 ARG TRP THR ARG MET ASP ILE ASP GLY LYS PRO HIS PRO SEQRES 10 A 301 HIS SER PHE ILE ARG ASP SER GLU GLU LYS ARG ASN VAL SEQRES 11 A 301 GLN VAL ASP VAL VAL GLU GLY LYS GLY ILE ASP ILE LYS SEQRES 12 A 301 SER SER LEU SER GLY LEU THR VAL LEU LYS SER THR ASN SEQRES 13 A 301 SER GLN PHE TRP GLY PHE LEU ARG ASP GLU TYR THR THR SEQRES 14 A 301 LEU LYS GLU THR TRP ASP ARG ILE LEU SER THR ASP VAL SEQRES 15 A 301 ASP ALA THR TRP GLN TRP LYS ASN PHE SER GLY LEU GLN SEQRES 16 A 301 GLU VAL ARG SER HIS VAL PRO LYS PHE ASP ALA THR TRP SEQRES 17 A 301 ALA THR ALA ARG GLU VAL THR LEU LYS THR PHE ALA GLU SEQRES 18 A 301 ASP ASN SER ALA SER VAL GLN ALA THR MET TYR LYS MET SEQRES 19 A 301 ALA GLU GLN ILE LEU ALA ARG GLN GLN LEU ILE GLU THR SEQRES 20 A 301 VAL GLU TYR SER LEU PRO ASN LYS HIS TYR PHE GLU ILE SEQRES 21 A 301 ASP LEU SER TRP HIS LYS GLY LEU GLN ASN THR GLY LYS SEQRES 22 A 301 ASN ALA GLU VAL PHE ALA PRO GLN SER ASP PRO ASN GLY SEQRES 23 A 301 LEU ILE LYS CYS THR VAL GLY ARG SER SER LEU LYS SER SEQRES 24 A 301 LYS LEU SEQRES 1 B 301 SAC ALA VAL LYS ALA ALA ARG TYR GLY LYS ASP ASN VAL SEQRES 2 B 301 ARG VAL TYR LYS VAL HIS LYS ASP GLU LYS THR GLY VAL SEQRES 3 B 301 GLN THR VAL TYR GLU MET THR VAL CYS VAL LEU LEU GLU SEQRES 4 B 301 GLY GLU ILE GLU THR SER TYR THR LYS ALA ASP ASN SER SEQRES 5 B 301 VAL ILE VAL ALA THR ASP SER ILE LYS ASN THR ILE TYR SEQRES 6 B 301 ILE THR ALA LYS GLN ASN PRO VAL THR PRO PRO GLU LEU SEQRES 7 B 301 PHE GLY SER ILE LEU GLY THR HIS PHE ILE GLU LYS TYR SEQRES 8 B 301 ASN HIS ILE HIS ALA ALA HIS VAL ASN ILE VAL CYS HIS SEQRES 9 B 301 ARG TRP THR ARG MET ASP ILE ASP GLY LYS PRO HIS PRO SEQRES 10 B 301 HIS SER PHE ILE ARG ASP SER GLU GLU LYS ARG ASN VAL SEQRES 11 B 301 GLN VAL ASP VAL VAL GLU GLY LYS GLY ILE ASP ILE LYS SEQRES 12 B 301 SER SER LEU SER GLY LEU THR VAL LEU LYS SER THR ASN SEQRES 13 B 301 SER GLN PHE TRP GLY PHE LEU ARG ASP GLU TYR THR THR SEQRES 14 B 301 LEU LYS GLU THR TRP ASP ARG ILE LEU SER THR ASP VAL SEQRES 15 B 301 ASP ALA THR TRP GLN TRP LYS ASN PHE SER GLY LEU GLN SEQRES 16 B 301 GLU VAL ARG SER HIS VAL PRO LYS PHE ASP ALA THR TRP SEQRES 17 B 301 ALA THR ALA ARG GLU VAL THR LEU LYS THR PHE ALA GLU SEQRES 18 B 301 ASP ASN SER ALA SER VAL GLN ALA THR MET TYR LYS MET SEQRES 19 B 301 ALA GLU GLN ILE LEU ALA ARG GLN GLN LEU ILE GLU THR SEQRES 20 B 301 VAL GLU TYR SER LEU PRO ASN LYS HIS TYR PHE GLU ILE SEQRES 21 B 301 ASP LEU SER TRP HIS LYS GLY LEU GLN ASN THR GLY LYS SEQRES 22 B 301 ASN ALA GLU VAL PHE ALA PRO GLN SER ASP PRO ASN GLY SEQRES 23 B 301 LEU ILE LYS CYS THR VAL GLY ARG SER SER LEU LYS SER SEQRES 24 B 301 LYS LEU SEQRES 1 C 301 SAC ALA VAL LYS ALA ALA ARG TYR GLY LYS ASP ASN VAL SEQRES 2 C 301 ARG VAL TYR LYS VAL HIS LYS ASP GLU LYS THR GLY VAL SEQRES 3 C 301 GLN THR VAL TYR GLU MET THR VAL CYS VAL LEU LEU GLU SEQRES 4 C 301 GLY GLU ILE GLU THR SER TYR THR LYS ALA ASP ASN SER SEQRES 5 C 301 VAL ILE VAL ALA THR ASP SER ILE LYS ASN THR ILE TYR SEQRES 6 C 301 ILE THR ALA LYS GLN ASN PRO VAL THR PRO PRO GLU LEU SEQRES 7 C 301 PHE GLY SER ILE LEU GLY THR HIS PHE ILE GLU LYS TYR SEQRES 8 C 301 ASN HIS ILE HIS ALA ALA HIS VAL ASN ILE VAL CYS HIS SEQRES 9 C 301 ARG TRP THR ARG MET ASP ILE ASP GLY LYS PRO HIS PRO SEQRES 10 C 301 HIS SER PHE ILE ARG ASP SER GLU GLU LYS ARG ASN VAL SEQRES 11 C 301 GLN VAL ASP VAL VAL GLU GLY LYS GLY ILE ASP ILE LYS SEQRES 12 C 301 SER SER LEU SER GLY LEU THR VAL LEU LYS SER THR ASN SEQRES 13 C 301 SER GLN PHE TRP GLY PHE LEU ARG ASP GLU TYR THR THR SEQRES 14 C 301 LEU LYS GLU THR TRP ASP ARG ILE LEU SER THR ASP VAL SEQRES 15 C 301 ASP ALA THR TRP GLN TRP LYS ASN PHE SER GLY LEU GLN SEQRES 16 C 301 GLU VAL ARG SER HIS VAL PRO LYS PHE ASP ALA THR TRP SEQRES 17 C 301 ALA THR ALA ARG GLU VAL THR LEU LYS THR PHE ALA GLU SEQRES 18 C 301 ASP ASN SER ALA SER VAL GLN ALA THR MET TYR LYS MET SEQRES 19 C 301 ALA GLU GLN ILE LEU ALA ARG GLN GLN LEU ILE GLU THR SEQRES 20 C 301 VAL GLU TYR SER LEU PRO ASN LYS HIS TYR PHE GLU ILE SEQRES 21 C 301 ASP LEU SER TRP HIS LYS GLY LEU GLN ASN THR GLY LYS SEQRES 22 C 301 ASN ALA GLU VAL PHE ALA PRO GLN SER ASP PRO ASN GLY SEQRES 23 C 301 LEU ILE LYS CYS THR VAL GLY ARG SER SER LEU LYS SER SEQRES 24 C 301 LYS LEU SEQRES 1 D 301 SAC ALA VAL LYS ALA ALA ARG TYR GLY LYS ASP ASN VAL SEQRES 2 D 301 ARG VAL TYR LYS VAL HIS LYS ASP GLU LYS THR GLY VAL SEQRES 3 D 301 GLN THR VAL TYR GLU MET THR VAL CYS VAL LEU LEU GLU SEQRES 4 D 301 GLY GLU ILE GLU THR SER TYR THR LYS ALA ASP ASN SER SEQRES 5 D 301 VAL ILE VAL ALA THR ASP SER ILE LYS ASN THR ILE TYR SEQRES 6 D 301 ILE THR ALA LYS GLN ASN PRO VAL THR PRO PRO GLU LEU SEQRES 7 D 301 PHE GLY SER ILE LEU GLY THR HIS PHE ILE GLU LYS TYR SEQRES 8 D 301 ASN HIS ILE HIS ALA ALA HIS VAL ASN ILE VAL CYS HIS SEQRES 9 D 301 ARG TRP THR ARG MET ASP ILE ASP GLY LYS PRO HIS PRO SEQRES 10 D 301 HIS SER PHE ILE ARG ASP SER GLU GLU LYS ARG ASN VAL SEQRES 11 D 301 GLN VAL ASP VAL VAL GLU GLY LYS GLY ILE ASP ILE LYS SEQRES 12 D 301 SER SER LEU SER GLY LEU THR VAL LEU LYS SER THR ASN SEQRES 13 D 301 SER GLN PHE TRP GLY PHE LEU ARG ASP GLU TYR THR THR SEQRES 14 D 301 LEU LYS GLU THR TRP ASP ARG ILE LEU SER THR ASP VAL SEQRES 15 D 301 ASP ALA THR TRP GLN TRP LYS ASN PHE SER GLY LEU GLN SEQRES 16 D 301 GLU VAL ARG SER HIS VAL PRO LYS PHE ASP ALA THR TRP SEQRES 17 D 301 ALA THR ALA ARG GLU VAL THR LEU LYS THR PHE ALA GLU SEQRES 18 D 301 ASP ASN SER ALA SER VAL GLN ALA THR MET TYR LYS MET SEQRES 19 D 301 ALA GLU GLN ILE LEU ALA ARG GLN GLN LEU ILE GLU THR SEQRES 20 D 301 VAL GLU TYR SER LEU PRO ASN LYS HIS TYR PHE GLU ILE SEQRES 21 D 301 ASP LEU SER TRP HIS LYS GLY LEU GLN ASN THR GLY LYS SEQRES 22 D 301 ASN ALA GLU VAL PHE ALA PRO GLN SER ASP PRO ASN GLY SEQRES 23 D 301 LEU ILE LYS CYS THR VAL GLY ARG SER SER LEU LYS SER SEQRES 24 D 301 LYS LEU MODRES 1WS3 SAC A 1 SER N-ACETYL-SERINE MODRES 1WS3 SAC B 1 SER N-ACETYL-SERINE MODRES 1WS3 SAC C 1 SER N-ACETYL-SERINE MODRES 1WS3 SAC D 1 SER N-ACETYL-SERINE HET SAC A 1 9 HET SAC B 1 9 HET SAC C 1 9 HET SAC D 1 9 HET URA A 900 8 HET URA B1900 8 HET URA C2900 8 HET URA D3900 8 HETNAM SAC N-ACETYL-SERINE HETNAM URA URACIL FORMUL 1 SAC 4(C5 H9 N O4) FORMUL 5 URA 4(C4 H4 N2 O2) HELIX 1 1 ILE A 42 LYS A 48 1 7 HELIX 2 2 ASP A 50 ILE A 54 5 5 HELIX 3 3 ALA A 56 GLN A 70 1 15 HELIX 4 4 PRO A 75 TYR A 91 1 17 HELIX 5 5 GLY A 193 SER A 199 1 7 HELIX 6 6 HIS A 200 ASP A 222 1 23 HELIX 7 7 SER A 226 ARG A 241 1 16 HELIX 8 8 THR A 271 ALA A 275 5 5 HELIX 9 9 ILE B 42 LYS B 48 1 7 HELIX 10 10 ALA B 56 ASN B 71 1 16 HELIX 11 11 PRO B 75 TYR B 91 1 17 HELIX 12 12 GLY B 193 HIS B 200 1 8 HELIX 13 13 HIS B 200 ASP B 222 1 23 HELIX 14 14 SER B 226 GLN B 242 1 17 HELIX 15 15 THR B 271 ALA B 275 5 5 HELIX 16 16 ILE C 42 LYS C 48 1 7 HELIX 17 17 ASP C 50 ILE C 54 5 5 HELIX 18 18 ALA C 56 ASN C 71 1 16 HELIX 19 19 PRO C 75 TYR C 91 1 17 HELIX 20 20 GLY C 193 HIS C 200 1 8 HELIX 21 21 HIS C 200 ASP C 222 1 23 HELIX 22 22 SER C 226 GLN C 242 1 17 HELIX 23 23 THR C 271 ALA C 275 5 5 HELIX 24 24 ILE D 42 LYS D 48 1 7 HELIX 25 25 ASP D 50 ILE D 54 5 5 HELIX 26 26 ALA D 56 GLN D 70 1 15 HELIX 27 27 PRO D 75 TYR D 91 1 17 HELIX 28 28 GLY D 193 ASP D 222 1 30 HELIX 29 29 SER D 226 ARG D 241 1 16 HELIX 30 30 THR D 271 ALA D 275 5 5 SHEET 1 A31 THR C 107 ILE C 111 0 SHEET 2 A31 LYS C 114 ILE C 121 -1 O LYS C 114 N ILE C 111 SHEET 3 A31 GLY A 139 LYS A 153 -1 O LEU A 152 N PHE C 120 SHEET 4 A31 LYS A 127 VAL A 135 -1 N LYS A 127 O SER A 147 SHEET 5 A31 ILE A 94 HIS A 104 -1 O ALA A 97 N VAL A 134 SHEET 6 A31 GLN A 27 GLY A 40 -1 O GLU A 31 N HIS A 104 SHEET 7 A31 VAL A 3 LYS A 20 -1 O TYR A 8 N LEU A 38 SHEET 8 A31 VAL C 277 PRO C 280 -1 N PHE C 278 O TYR A 16 SHEET 9 A31 TYR C 257 GLU C 259 -1 N PHE C 258 O ALA C 279 SHEET 10 A31 VAL C 277 PRO C 280 -1 O ALA C 279 N PHE C 258 SHEET 11 A31 VAL A 3 LYS A 20 -1 O TYR A 16 N PHE C 278 SHEET 12 A31 ASN B 285 GLY B 293 -1 O ASN B 285 N ASP A 11 SHEET 13 A31 ILE B 245 LYS B 255 -1 O VAL B 248 N VAL B 292 SHEET 14 A31 LEU B 178 TRP B 188 -1 O SER B 179 N LYS B 255 SHEET 15 A31 GLY B 139 LYS B 153 -1 O ILE B 142 N TRP B 188 SHEET 16 A31 LYS D 114 ILE D 121 -1 N PHE D 120 O LEU B 152 SHEET 17 A31 THR D 107 ILE D 111 -1 O THR D 107 N ILE D 121 SHEET 18 A31 LYS D 114 ILE D 121 -1 O LYS D 114 N ILE D 111 SHEET 19 A31 GLY B 139 LYS B 153 -1 O LEU B 152 N PHE D 120 SHEET 20 A31 LYS B 127 VAL B 135 -1 N LYS B 127 O SER B 147 SHEET 21 A31 ILE B 94 HIS B 104 -1 O ALA B 97 N VAL B 134 SHEET 22 A31 GLN B 27 GLY B 40 -1 O GLU B 31 N HIS B 104 SHEET 23 A31 VAL B 3 LYS B 20 -1 O TYR B 8 N LEU B 38 SHEET 24 A31 VAL D 277 PRO D 280 -1 N PHE D 278 O TYR B 16 SHEET 25 A31 TYR D 257 GLU D 259 -1 N PHE D 258 O ALA D 279 SHEET 26 A31 VAL D 277 PRO D 280 -1 N ALA D 279 O PHE D 258 SHEET 27 A31 VAL B 3 LYS B 20 -1 O TYR B 16 N PHE D 278 SHEET 28 A31 ASN A 285 GLY A 293 -1 O ASN A 285 N ASP B 11 SHEET 29 A31 ILE A 245 LYS A 255 -1 O VAL A 248 N VAL A 292 SHEET 30 A31 LEU A 178 TRP A 188 -1 O SER A 179 N LYS A 255 SHEET 31 A31 GLY A 139 LYS A 153 -1 O ILE A 142 N TRP A 188 SHEET 1 B31 THR A 107 ILE A 111 0 SHEET 2 B31 LYS A 114 ILE A 121 -1 O LYS A 114 N ILE A 111 SHEET 3 B31 GLY C 139 LYS C 153 -1 O LEU C 152 N PHE A 120 SHEET 4 B31 LYS C 127 VAL C 135 -1 N LYS C 127 O SER C 147 SHEET 5 B31 ILE C 94 HIS C 104 -1 O ALA C 97 N VAL C 134 SHEET 6 B31 GLN C 27 GLY C 40 -1 O GLU C 31 N HIS C 104 SHEET 7 B31 VAL C 3 LYS C 20 -1 O TYR C 8 N LEU C 38 SHEET 8 B31 VAL A 277 PRO A 280 -1 N PHE A 278 O TYR C 16 SHEET 9 B31 TYR A 257 GLU A 259 -1 O PHE A 258 N ALA A 279 SHEET 10 B31 VAL A 277 PRO A 280 -1 N ALA A 279 O PHE A 258 SHEET 11 B31 VAL C 3 LYS C 20 -1 O TYR C 16 N PHE A 278 SHEET 12 B31 ASN D 285 GLY D 293 -1 O ASN D 285 N ASP C 11 SHEET 13 B31 ILE D 245 LYS D 255 -1 O VAL D 248 N VAL D 292 SHEET 14 B31 LEU D 178 TRP D 188 -1 O SER D 179 N LYS D 255 SHEET 15 B31 GLY D 139 LYS D 153 -1 O ILE D 142 N TRP D 188 SHEET 16 B31 LYS B 114 ILE B 121 -1 N PHE B 120 O LEU D 152 SHEET 17 B31 THR B 107 ILE B 111 -1 O THR B 107 N ILE B 121 SHEET 18 B31 LYS B 114 ILE B 121 -1 O LYS B 114 N ILE B 111 SHEET 19 B31 GLY D 139 LYS D 153 -1 O LEU D 152 N PHE B 120 SHEET 20 B31 LYS D 127 VAL D 135 -1 N LYS D 127 O SER D 147 SHEET 21 B31 ILE D 94 HIS D 104 -1 O ALA D 97 N VAL D 134 SHEET 22 B31 GLN D 27 GLY D 40 -1 O GLU D 31 N HIS D 104 SHEET 23 B31 VAL D 3 LYS D 20 -1 O TYR D 8 N LEU D 38 SHEET 24 B31 VAL B 277 PRO B 280 -1 N PHE B 278 O TYR D 16 SHEET 25 B31 TYR B 257 GLU B 259 -1 O PHE B 258 N ALA B 279 SHEET 26 B31 VAL B 277 PRO B 280 -1 N ALA B 279 O PHE B 258 SHEET 27 B31 VAL D 3 LYS D 20 -1 O TYR D 16 N PHE B 278 SHEET 28 B31 ASN C 285 GLY C 293 -1 O ASN C 285 N ASP D 11 SHEET 29 B31 ILE C 245 LYS C 255 -1 O VAL C 248 N VAL C 292 SHEET 30 B31 LEU C 178 TRP C 188 -1 O SER C 179 N LYS C 255 SHEET 31 B31 GLY C 139 LYS C 153 -1 O ILE C 142 N TRP C 188 LINK C SAC A 1 N ALA A 2 1555 1555 1.36 LINK C SAC B 1 N ALA B 2 1555 1555 1.34 LINK C SAC C 1 N ALA C 2 1555 1555 1.34 LINK C SAC D 1 N ALA D 2 1555 1555 1.37 CISPEP 1 THR A 74 PRO A 75 0 -3.98 CISPEP 2 ASP A 283 PRO A 284 0 -4.91 CISPEP 3 THR B 74 PRO B 75 0 2.55 CISPEP 4 ASP B 283 PRO B 284 0 -6.62 CISPEP 5 THR C 74 PRO C 75 0 -2.16 CISPEP 6 ASP C 283 PRO C 284 0 -1.31 CISPEP 7 THR D 74 PRO D 75 0 0.32 CISPEP 8 ASP D 283 PRO D 284 0 -5.92 SITE 1 AC1 4 PHE A 159 ARG A 176 VAL A 227 THR B 57 SITE 1 AC2 7 TYR A 8 ILE A 54 THR A 57 PHE B 159 SITE 2 AC2 7 ARG B 176 VAL B 227 GLN B 228 SITE 1 AC3 4 PHE C 159 ARG C 176 VAL C 227 THR D 57 SITE 1 AC4 4 THR C 57 PHE D 159 ARG D 176 VAL D 227 CRYST1 140.601 140.601 151.076 90.00 90.00 120.00 P 31 2 1 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007112 0.004106 0.000000 0.00000 SCALE2 0.000000 0.008213 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006619 0.00000 HETATM 1 C1A SAC A 1 -16.669 141.140 47.243 1.00 60.63 C HETATM 2 C2A SAC A 1 -16.800 141.088 48.768 1.00 55.98 C HETATM 3 OAC SAC A 1 -15.670 141.682 46.587 1.00 59.63 O HETATM 4 N SAC A 1 -17.592 140.423 46.407 1.00 59.88 N HETATM 5 CA SAC A 1 -17.448 140.359 44.935 1.00 59.12 C HETATM 6 C SAC A 1 -18.623 141.061 44.208 1.00 46.45 C HETATM 7 O SAC A 1 -19.700 141.342 44.824 1.00 47.30 O HETATM 8 CB SAC A 1 -17.376 138.905 44.384 1.00 63.88 C HETATM 9 OG SAC A 1 -18.203 138.091 45.152 1.00 79.30 O