HEADER APOPTOSIS 12-NOV-04 1WSX TITLE SOLUTION STRUCTURE OF MCL-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYELOID CELL LEUKEMIA SEQUENCE 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 152-308; COMPND 5 SYNONYM: MYELOID CELL LEUKEMIA-1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: MCL-1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PGEX6P-3; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PLASMID KEYWDS HELICAL BUNDLE, APOPTOSIS, BCL-2, BH3, MCL-1 EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.L.DAY,L.CHEN,S.J.RICHARDSON,P.J.HARRISON,D.C.HUANG,M.G.HINDS REVDAT 4 02-MAR-22 1WSX 1 REMARK SEQADV REVDAT 3 24-FEB-09 1WSX 1 VERSN REVDAT 2 08-MAR-05 1WSX 1 JRNL REVDAT 1 23-NOV-04 1WSX 0 JRNL AUTH C.L.DAY,L.CHEN,S.J.RICHARDSON,P.J.HARRISON,D.C.HUANG, JRNL AUTH 2 M.G.HINDS JRNL TITL SOLUTION STRUCTURE OF PROSURVIVAL MCL-1 AND CHARACTERIZATION JRNL TITL 2 OF ITS BINDING BY PROAPOPTOTIC BH3-ONLY LIGANDS JRNL REF J.BIOL.CHEM. V. 280 4738 2005 JRNL REFN ISSN 0021-9258 JRNL PMID 15550399 JRNL DOI 10.1074/JBC.M411434200 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, XPLOR-NIH 2 REMARK 3 AUTHORS : BRUKER AG (XWINNMR), REMARK 3 C.D.SCHWIETERS,J.J.KUSZEWSKI,N.TJANDRA,G.M.CLORE REMARK 3 (XPLOR-NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON A TOTAL OF REMARK 3 3974 CONSTAINTS, 3507 ARE NOE-DERIVED DISTANCE CONSTRAINTS, 335 REMARK 3 DIHEDRAL ANGLE RESTRAINTS AND 66 HYDROGEN BOND CONSTRAINTS REMARK 4 REMARK 4 1WSX COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-NOV-04. REMARK 100 THE DEPOSITION ID IS D_1000023962. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.7 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM U-15N MCL-1; 1MM U-13C,15N REMARK 210 MCL-1 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : HNHA; 3D_15N-SEPARATED_NOESY; REMARK 210 3D_13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : DRX; AV REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XEASY 1.3.13, DYANA 1.5 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, DISTANCE REMARK 210 GEOMETRY, SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 256 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY, STRUCTURES WITH THE REMARK 210 LEAST RESTRAINT VIOLATIONS, REMARK 210 STRUCTURES WITH ACCEPTABLE REMARK 210 COVALENT GEOMETRY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING STANDARD 3D REMARK 210 HETERONUCLAR NMR TECHNIQUES. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 152 -149.74 -71.02 REMARK 500 1 GLU A 182 -44.58 -141.04 REMARK 500 1 GLU A 206 -35.95 -34.09 REMARK 500 1 ASP A 217 84.67 -170.62 REMARK 500 1 PHE A 235 39.70 -97.66 REMARK 500 1 ARG A 291 24.33 41.15 REMARK 500 1 TRP A 293 -63.51 -29.00 REMARK 500 1 GLN A 303 -69.62 -102.09 REMARK 500 2 GLU A 152 -153.50 -90.06 REMARK 500 2 LYS A 175 -124.61 -72.22 REMARK 500 2 LEU A 180 173.14 -59.97 REMARK 500 2 GLU A 182 -50.07 -150.04 REMARK 500 2 GLU A 206 -35.77 -34.53 REMARK 500 2 ASP A 217 72.11 -166.70 REMARK 500 2 LYS A 236 -79.15 -26.23 REMARK 500 2 ASP A 237 -70.13 -172.92 REMARK 500 2 ASN A 263 60.23 65.35 REMARK 500 2 ARG A 291 23.51 43.88 REMARK 500 3 ASP A 153 52.94 -107.84 REMARK 500 3 PRO A 179 157.25 -48.19 REMARK 500 3 GLU A 206 -35.09 -34.07 REMARK 500 3 ASP A 217 79.56 -168.76 REMARK 500 3 PHE A 235 39.46 -92.94 REMARK 500 3 ARG A 291 23.91 43.92 REMARK 500 3 HIS A 301 30.68 -87.86 REMARK 500 4 GLU A 206 -35.06 -34.14 REMARK 500 4 ASP A 217 76.95 -162.97 REMARK 500 4 PHE A 235 39.72 -98.56 REMARK 500 4 ASN A 263 54.21 70.36 REMARK 500 4 ARG A 291 24.13 45.01 REMARK 500 4 PHE A 300 50.66 -115.68 REMARK 500 5 ASP A 153 71.75 -117.82 REMARK 500 5 LEU A 180 -178.87 -65.35 REMARK 500 5 GLU A 206 -34.78 -34.41 REMARK 500 5 ASP A 217 73.88 -164.41 REMARK 500 5 ARG A 291 22.17 44.43 REMARK 500 5 PHE A 300 53.43 -115.47 REMARK 500 5 GLN A 303 -68.80 -102.25 REMARK 500 6 ASP A 153 56.66 -95.87 REMARK 500 6 GLU A 206 -35.43 -33.98 REMARK 500 6 ASP A 217 77.26 -169.36 REMARK 500 6 PHE A 235 39.71 -97.21 REMARK 500 6 ARG A 291 26.66 39.75 REMARK 500 6 TRP A 293 -64.12 -29.45 REMARK 500 7 SER A 174 21.02 -144.18 REMARK 500 7 LYS A 175 -119.45 -73.02 REMARK 500 7 GLU A 182 -33.54 -132.26 REMARK 500 7 GLU A 206 -35.42 -34.10 REMARK 500 7 ASP A 217 75.89 -165.46 REMARK 500 7 ARG A 291 25.16 43.64 REMARK 500 REMARK 500 THIS ENTRY HAS 161 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1WSX A 152 308 UNP P97287 MCL1_MOUSE 152 308 SEQADV 1WSX GLY A 147 UNP P97287 CLONING ARTIFACT SEQADV 1WSX PRO A 148 UNP P97287 CLONING ARTIFACT SEQADV 1WSX LEU A 149 UNP P97287 CLONING ARTIFACT SEQADV 1WSX GLY A 150 UNP P97287 CLONING ARTIFACT SEQADV 1WSX SER A 151 UNP P97287 CLONING ARTIFACT SEQRES 1 A 162 GLY PRO LEU GLY SER GLU ASP ASP LEU TYR ARG GLN SER SEQRES 2 A 162 LEU GLU ILE ILE SER ARG TYR LEU ARG GLU GLN ALA THR SEQRES 3 A 162 GLY SER LYS ASP SER LYS PRO LEU GLY GLU ALA GLY ALA SEQRES 4 A 162 ALA GLY ARG ARG ALA LEU GLU THR LEU ARG ARG VAL GLY SEQRES 5 A 162 ASP GLY VAL GLN ARG ASN HIS GLU THR ALA PHE GLN GLY SEQRES 6 A 162 MET LEU ARG LYS LEU ASP ILE LYS ASN GLU GLY ASP VAL SEQRES 7 A 162 LYS SER PHE SER ARG VAL MET VAL HIS VAL PHE LYS ASP SEQRES 8 A 162 GLY VAL THR ASN TRP GLY ARG ILE VAL THR LEU ILE SER SEQRES 9 A 162 PHE GLY ALA PHE VAL ALA LYS HIS LEU LYS SER VAL ASN SEQRES 10 A 162 GLN GLU SER PHE ILE GLU PRO LEU ALA GLU THR ILE THR SEQRES 11 A 162 ASP VAL LEU VAL ARG THR LYS ARG ASP TRP LEU VAL LYS SEQRES 12 A 162 GLN ARG GLY TRP ASP GLY PHE VAL GLU PHE PHE HIS VAL SEQRES 13 A 162 GLN ASP LEU GLU GLY GLY HELIX 1 1 ASP A 153 GLY A 173 1 21 HELIX 2 2 GLY A 184 LEU A 216 1 33 HELIX 3 3 ASP A 223 PHE A 235 1 13 HELIX 4 4 ASN A 241 VAL A 262 1 22 HELIX 5 5 GLN A 264 LYS A 283 1 20 HELIX 6 6 LYS A 283 GLN A 290 1 8 HELIX 7 7 GLY A 292 PHE A 300 1 9 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1