data_1WTB # _entry.id 1WTB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1WTB pdb_00001wtb 10.2210/pdb1wtb/pdb RCSB RCSB023975 ? ? WWPDB D_1000023975 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1IQT 'The 20 structures with the lowest enagey of the C-terminal RNA-binding domain of hnRNP D' unspecified PDB 1HD0 'The minimized average structure of the N-terminal RNA-binding domain of hnRNP D' unspecified PDB 1HD1 'The 20 structures of the N-terminal RNA-binding domain of hnRNP D' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1WTB _pdbx_database_status.recvd_initial_deposition_date 2004-11-22 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Enokizono, Y.' 1 'Konishi, Y.' 2 'Nagata, K.' 3 'Ouhashi, K.' 4 'Uesugi, S.' 5 'Ishikawa, F.' 6 'Katahira, M.' 7 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Structure of hnRNP D complexed with single-stranded telomere DNA and unfolding of the quadruplex by heterogeneous nuclear ribonucleoprotein D ; J.Biol.Chem. 280 18862 18870 2005 JBCHA3 US 0021-9258 0071 ? 15734733 10.1074/jbc.M411822200 1 ;Structure of the C-terminal RNA-binding domain of hnRNP D0 (AUF1), its interactions with RNA and DNA, and change in backbone dynamics upon complex formation with DNA ; J.Mol.Biol. 311 973 988 2001 JMOBAK UK 0022-2836 0070 ? 11531333 10.1006/jmbi.2001.4862 2 'Structure and interactions with RNA of the N-terminal UUAG-specific RNA-binding domain of hnRNP D0' J.Mol.Biol. 287 221 237 1999 JMOBAK UK 0022-2836 0070 ? 10080887 10.1006/jmbi.1999.2616 3 ;Nuclear proteins that bind the pre-mRNA 3' splice site sequence r(UUAG/G) and the human telomeric DNA sequence d(TTAGGG)n ; Mol.Cell.Biol. 13 4301 4310 1993 MCEBD4 US 0270-7306 2044 ? 8321232 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Enokizono, Y.' 1 ? primary 'Konishi, Y.' 2 ? primary 'Nagata, K.' 3 ? primary 'Ouhashi, K.' 4 ? primary 'Uesugi, S.' 5 ? primary 'Ishikawa, F.' 6 ? primary 'Katahira, M.' 7 ? 1 'Katahira, M.' 8 ? 1 'Miyanoiri, Y.' 9 ? 1 'Enokizono, Y.' 10 ? 1 'Matsuda, G.' 11 ? 1 'Nagata, T.' 12 ? 1 'Ishikawa, F.' 13 ? 1 'Uesugi, S.' 14 ? 2 'Nagata, T.' 15 ? 2 'Kurihara, Y.' 16 ? 2 'Matsuda, G.' 17 ? 2 'Saeki, J.' 18 ? 2 'Kohno, T.' 19 ? 2 'Yanagida, Y.' 20 ? 2 'Ishikawa, F.' 21 ? 2 'Uesugi, S.' 22 ? 2 'Katahira, M.' 23 ? 3 'Ishikawa, F.' 24 ? 3 'Matunis, M.J.' 25 ? 3 'Dreyfuss, G.' 26 ? 3 'Cech, T.R.' 27 ? # _cell.entry_id 1WTB _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1WTB _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(P*TP*AP*GP*G)-3'" 1230.854 1 ? ? ? ? 2 polymer man 'Heterogeneous nuclear ribonucleoprotein D0' 9103.628 1 ? ? 'C-terminal RNA-binding domain' ? # _entity_name_com.entity_id 2 _entity_name_com.name 'AUF1, hnRNP D0, AU-rich element RNA-binding protein 1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DA)(DG)(DG)' TAGG B ? 2 'polypeptide(L)' no no VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMS VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMS A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DA n 1 3 DG n 1 4 DG n 2 1 VAL n 2 2 LYS n 2 3 LYS n 2 4 ILE n 2 5 PHE n 2 6 VAL n 2 7 GLY n 2 8 GLY n 2 9 LEU n 2 10 SER n 2 11 PRO n 2 12 ASP n 2 13 THR n 2 14 PRO n 2 15 GLU n 2 16 GLU n 2 17 LYS n 2 18 ILE n 2 19 ARG n 2 20 GLU n 2 21 TYR n 2 22 PHE n 2 23 GLY n 2 24 GLY n 2 25 PHE n 2 26 GLY n 2 27 GLU n 2 28 VAL n 2 29 GLU n 2 30 SER n 2 31 ILE n 2 32 GLU n 2 33 LEU n 2 34 PRO n 2 35 MET n 2 36 ASP n 2 37 ASN n 2 38 LYS n 2 39 THR n 2 40 ASN n 2 41 LYS n 2 42 ARG n 2 43 ARG n 2 44 GLY n 2 45 PHE n 2 46 CYS n 2 47 PHE n 2 48 ILE n 2 49 THR n 2 50 PHE n 2 51 LYS n 2 52 GLU n 2 53 GLU n 2 54 GLU n 2 55 PRO n 2 56 VAL n 2 57 LYS n 2 58 LYS n 2 59 ILE n 2 60 MET n 2 61 GLU n 2 62 LYS n 2 63 LYS n 2 64 TYR n 2 65 HIS n 2 66 ASN n 2 67 VAL n 2 68 GLY n 2 69 LEU n 2 70 SER n 2 71 LYS n 2 72 CYS n 2 73 GLU n 2 74 ILE n 2 75 LYS n 2 76 VAL n 2 77 ALA n 2 78 MET n 2 79 SER n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET3a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP HNRPD_HUMAN Q14103 2 VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMS 181 ? 2 PDB 1WTB 1WTB 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1WTB A 1 ? 79 ? Q14103 181 ? 259 ? 181 259 2 2 1WTB B 1 ? 4 ? 1WTB 2 ? 5 ? 2 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 2 1 3D_15N-separated_NOESY 2 2 1 3D_15N-separated_TOCSY 3 4 1 3D_13C-separated_NOESY 4 2 1 '3D HNHA' 5 1 1 '3D HNCA' 6 4 1 HCCH-TOCSY 7 4 1 HCCH-COSY 8 2 1 '1H, 15N-HSQC' 9 5 1 2D_ROESY 10 5 1 2D_NOESY # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 288 _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength '100mM NaCl' _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 '2mM U-13C, 15N hnRNP D BD2, 2.4mM DNA, 20mM Sodium Phosphate, 10mM Deuterated DTT, 1mM Sodium Azide' '95% H2O/5% D2O' 2 '2mM U-15N hnRNP D BD2, 2.4mM DNA, 20mM Sodium Phosphate, 10mM Deuterated DTT, 1mM Sodium Azide' '95% H2O/5% D2O' 3 '2mM hnRNP D BD2, 2.4mM DNA, 20mM Sodium Phosphate, 10mM Deuterated DTT, 1mM Sodium Azide' '95% H2O/5% D2O' 4 '2mM U-13C, 15N hnRNP D BD2, 2.4mM DNA, 20mM Sodium Phosphate, 10mM Deuterated DTT, 1mM Sodium Azide' '100% D2O' 5 '2mM U-15N hnRNP D BD2, 2.4mM DNA, 20mM Sodium Phosphate, 10mM Deuterated DTT, 1mM Sodium Azide' '100% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model DRX _pdbx_nmr_spectrometer.field_strength 600 # _pdbx_nmr_refine.entry_id 1WTB _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1WTB _pdbx_nmr_details.text 'This structure was determined using standard 2D homonuclear and 3D heteronuclear techniques.' # _pdbx_nmr_ensemble.entry_id 1WTB _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1WTB _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal X-PLOR 3.851 'structure solution' BRUNGER 1 NMRPipe ? processing ? 2 XwinNMR ? collection ? 3 X-PLOR 3.851 refinement ? 4 # _exptl.entry_id 1WTB _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1WTB _struct.title 'Complex structure of the C-terminal RNA-binding domain of hnRNP D (AUF1) with telomere DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1WTB _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'RNA-binding domain, DNA-binding domain, RRM, hnRNP D, AUF1, Telomere, Complex, structural genomics, TRANSCRIPTION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU B 15 ? PHE B 25 ? GLU A 195 PHE A 205 1 ? 11 HELX_P HELX_P2 2 GLU B 53 ? GLU B 61 ? GLU A 233 GLU A 241 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id hydrog1 _struct_conn.conn_type_id hydrog _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id DA _struct_conn.ptnr1_label_seq_id 2 _struct_conn.ptnr1_label_atom_id N3 _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id DG _struct_conn.ptnr2_label_seq_id 3 _struct_conn.ptnr2_label_atom_id N2 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id DA _struct_conn.ptnr1_auth_seq_id 3 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id DG _struct_conn.ptnr2_auth_seq_id 4 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details 'DA-DG MISPAIR' _struct_conn.pdbx_dist_value ? _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR B 64 ? VAL B 67 ? TYR A 244 VAL A 247 A 2 SER B 70 ? LYS B 75 ? SER A 250 LYS A 255 A 3 LYS B 3 ? GLY B 8 ? LYS A 183 GLY A 188 A 4 PHE B 45 ? PHE B 50 ? PHE A 225 PHE A 230 A 5 VAL B 28 ? PRO B 34 ? VAL A 208 PRO A 214 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O HIS B 65 ? O HIS A 245 N CYS B 72 ? N CYS A 252 A 2 3 O LYS B 75 ? O LYS A 255 N PHE B 5 ? N PHE A 185 A 3 4 N VAL B 6 ? N VAL A 186 O CYS B 46 ? O CYS A 226 A 4 5 O THR B 49 ? O THR A 229 N GLU B 29 ? N GLU A 209 # _database_PDB_matrix.entry_id 1WTB _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1WTB _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 2 2 DT T B . n A 1 2 DA 2 3 3 DA A B . n A 1 3 DG 3 4 4 DG G B . n A 1 4 DG 4 5 5 DG G B . n B 2 1 VAL 1 181 181 VAL VAL A . n B 2 2 LYS 2 182 182 LYS LYS A . n B 2 3 LYS 3 183 183 LYS LYS A . n B 2 4 ILE 4 184 184 ILE ILE A . n B 2 5 PHE 5 185 185 PHE PHE A . n B 2 6 VAL 6 186 186 VAL VAL A . n B 2 7 GLY 7 187 187 GLY GLY A . n B 2 8 GLY 8 188 188 GLY GLY A . n B 2 9 LEU 9 189 189 LEU LEU A . n B 2 10 SER 10 190 190 SER SER A . n B 2 11 PRO 11 191 191 PRO PRO A . n B 2 12 ASP 12 192 192 ASP ASP A . n B 2 13 THR 13 193 193 THR THR A . n B 2 14 PRO 14 194 194 PRO PRO A . n B 2 15 GLU 15 195 195 GLU GLU A . n B 2 16 GLU 16 196 196 GLU GLU A . n B 2 17 LYS 17 197 197 LYS LYS A . n B 2 18 ILE 18 198 198 ILE ILE A . n B 2 19 ARG 19 199 199 ARG ARG A . n B 2 20 GLU 20 200 200 GLU GLU A . n B 2 21 TYR 21 201 201 TYR TYR A . n B 2 22 PHE 22 202 202 PHE PHE A . n B 2 23 GLY 23 203 203 GLY GLY A . n B 2 24 GLY 24 204 204 GLY GLY A . n B 2 25 PHE 25 205 205 PHE PHE A . n B 2 26 GLY 26 206 206 GLY GLY A . n B 2 27 GLU 27 207 207 GLU GLU A . n B 2 28 VAL 28 208 208 VAL VAL A . n B 2 29 GLU 29 209 209 GLU GLU A . n B 2 30 SER 30 210 210 SER SER A . n B 2 31 ILE 31 211 211 ILE ILE A . n B 2 32 GLU 32 212 212 GLU GLU A . n B 2 33 LEU 33 213 213 LEU LEU A . n B 2 34 PRO 34 214 214 PRO PRO A . n B 2 35 MET 35 215 215 MET MET A . n B 2 36 ASP 36 216 216 ASP ASP A . n B 2 37 ASN 37 217 217 ASN ASN A . n B 2 38 LYS 38 218 218 LYS LYS A . n B 2 39 THR 39 219 219 THR THR A . n B 2 40 ASN 40 220 220 ASN ASN A . n B 2 41 LYS 41 221 221 LYS LYS A . n B 2 42 ARG 42 222 222 ARG ARG A . n B 2 43 ARG 43 223 223 ARG ARG A . n B 2 44 GLY 44 224 224 GLY GLY A . n B 2 45 PHE 45 225 225 PHE PHE A . n B 2 46 CYS 46 226 226 CYS CYS A . n B 2 47 PHE 47 227 227 PHE PHE A . n B 2 48 ILE 48 228 228 ILE ILE A . n B 2 49 THR 49 229 229 THR THR A . n B 2 50 PHE 50 230 230 PHE PHE A . n B 2 51 LYS 51 231 231 LYS LYS A . n B 2 52 GLU 52 232 232 GLU GLU A . n B 2 53 GLU 53 233 233 GLU GLU A . n B 2 54 GLU 54 234 234 GLU GLU A . n B 2 55 PRO 55 235 235 PRO PRO A . n B 2 56 VAL 56 236 236 VAL VAL A . n B 2 57 LYS 57 237 237 LYS LYS A . n B 2 58 LYS 58 238 238 LYS LYS A . n B 2 59 ILE 59 239 239 ILE ILE A . n B 2 60 MET 60 240 240 MET MET A . n B 2 61 GLU 61 241 241 GLU GLU A . n B 2 62 LYS 62 242 242 LYS LYS A . n B 2 63 LYS 63 243 243 LYS LYS A . n B 2 64 TYR 64 244 244 TYR TYR A . n B 2 65 HIS 65 245 245 HIS HIS A . n B 2 66 ASN 66 246 246 ASN ASN A . n B 2 67 VAL 67 247 247 VAL VAL A . n B 2 68 GLY 68 248 248 GLY GLY A . n B 2 69 LEU 69 249 249 LEU LEU A . n B 2 70 SER 70 250 250 SER SER A . n B 2 71 LYS 71 251 251 LYS LYS A . n B 2 72 CYS 72 252 252 CYS CYS A . n B 2 73 GLU 73 253 253 GLU GLU A . n B 2 74 ILE 74 254 254 ILE ILE A . n B 2 75 LYS 75 255 255 LYS LYS A . n B 2 76 VAL 76 256 256 VAL VAL A . n B 2 77 ALA 77 257 257 ALA ALA A . n B 2 78 MET 78 258 258 MET MET A . n B 2 79 SER 79 259 259 SER SER A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-04-05 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 650 ;HELIX DETERMINATION METHOD: AUTHOR DETERMINED ; 700 ;SHEET DETERMINATION METHOD: AUTHOR DETERMINED ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A GLU 200 ? ? H A GLY 204 ? ? 1.41 2 1 O A LYS 243 ? ? H A ILE 254 ? ? 1.43 3 1 H A GLU 209 ? ? O A THR 229 ? ? 1.46 4 2 O A LYS 243 ? ? H A ILE 254 ? ? 1.43 5 2 "H4'" B DA 3 ? ? "O5'" B DG 4 ? ? 1.55 6 2 O A GLU 200 ? ? H A GLY 204 ? ? 1.59 7 3 O A LYS 243 ? ? H A ILE 254 ? ? 1.37 8 3 O A GLU 200 ? ? H A GLY 204 ? ? 1.44 9 3 HG A SER 210 ? ? OE2 A GLU 212 ? ? 1.55 10 4 O A GLU 200 ? ? H A GLY 204 ? ? 1.42 11 4 O A MET 215 ? ? HH11 A ARG 223 ? ? 1.51 12 4 O A LYS 238 ? ? H A GLU 241 ? ? 1.55 13 4 "H4'" B DA 3 ? ? "O5'" B DG 4 ? ? 1.55 14 5 O A LYS 243 ? ? H A ILE 254 ? ? 1.37 15 5 O A GLU 200 ? ? H A GLY 204 ? ? 1.43 16 5 O A LYS 238 ? ? H A GLU 241 ? ? 1.56 17 6 O A LYS 243 ? ? H A ILE 254 ? ? 1.40 18 6 "H4'" B DA 3 ? ? "O5'" B DG 4 ? ? 1.52 19 6 O A LYS 238 ? ? H A GLU 241 ? ? 1.55 20 7 O A GLU 200 ? ? H A GLY 204 ? ? 1.47 21 7 H A GLU 209 ? ? O A THR 229 ? ? 1.47 22 7 "H4'" B DA 3 ? ? "O5'" B DG 4 ? ? 1.51 23 7 O A LYS 238 ? ? H A GLU 241 ? ? 1.57 24 8 O A LYS 243 ? ? H A ILE 254 ? ? 1.38 25 8 "H4'" B DA 3 ? ? "O5'" B DG 4 ? ? 1.50 26 9 O A GLU 200 ? ? H A GLY 204 ? ? 1.44 27 9 O A LYS 238 ? ? H A GLU 241 ? ? 1.45 28 9 H A GLU 209 ? ? O A THR 229 ? ? 1.46 29 10 O A LYS 243 ? ? H A ILE 254 ? ? 1.40 30 10 O A GLU 200 ? ? H A GLY 204 ? ? 1.45 31 10 O A LYS 238 ? ? H A GLU 241 ? ? 1.59 32 11 O A LYS 243 ? ? H A ILE 254 ? ? 1.40 33 11 "H4'" B DA 3 ? ? "O5'" B DG 4 ? ? 1.51 34 11 O A LYS 238 ? ? H A GLU 241 ? ? 1.52 35 11 OG1 A THR 193 ? ? HG A SER 250 ? ? 1.53 36 12 H A GLU 209 ? ? O A THR 229 ? ? 1.45 37 12 O A LYS 243 ? ? H A ILE 254 ? ? 1.50 38 12 O A GLU 200 ? ? H A GLY 204 ? ? 1.51 39 12 O A LYS 238 ? ? H A GLU 241 ? ? 1.59 40 13 O A LYS 243 ? ? H A ILE 254 ? ? 1.36 41 13 H A GLU 209 ? ? O A THR 229 ? ? 1.47 42 13 O A LYS 238 ? ? H A GLU 241 ? ? 1.52 43 13 O A GLU 200 ? ? H A GLY 204 ? ? 1.59 44 14 O A GLU 200 ? ? H A GLY 204 ? ? 1.43 45 14 H A GLU 209 ? ? O A THR 229 ? ? 1.48 46 14 O A LYS 243 ? ? H A ILE 254 ? ? 1.52 47 15 O A LYS 243 ? ? H A ILE 254 ? ? 1.40 48 15 O A GLU 200 ? ? H A GLY 204 ? ? 1.48 49 15 O A LYS 238 ? ? H A GLU 241 ? ? 1.55 50 15 HE A ARG 222 ? ? O A ARG 223 ? ? 1.56 51 16 H A GLU 209 ? ? O A THR 229 ? ? 1.47 52 16 O A LYS 238 ? ? H A GLU 241 ? ? 1.51 53 17 O A GLU 200 ? ? H A GLY 204 ? ? 1.45 54 17 O A LYS 238 ? ? H A GLU 241 ? ? 1.51 55 17 O A LYS 243 ? ? H A ILE 254 ? ? 1.59 56 18 O A LYS 243 ? ? H A ILE 254 ? ? 1.39 57 18 O A LYS 238 ? ? H A GLU 241 ? ? 1.45 58 18 O A GLU 200 ? ? H A GLY 204 ? ? 1.47 59 18 OG1 A THR 193 ? ? HG A SER 250 ? ? 1.58 60 19 O A GLU 200 ? ? H A GLY 204 ? ? 1.41 61 19 O A LYS 243 ? ? H A ILE 254 ? ? 1.41 62 19 H A GLU 209 ? ? O A THR 229 ? ? 1.47 63 20 O A LYS 243 ? ? H A ILE 254 ? ? 1.40 64 20 H A GLU 209 ? ? O A THR 229 ? ? 1.46 65 20 O A GLU 200 ? ? H A GLY 204 ? ? 1.50 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 182 ? ? -150.14 -35.11 2 1 LYS A 183 ? ? -102.55 -167.46 3 1 LEU A 189 ? ? -177.24 -143.04 4 1 PRO A 191 ? ? -28.65 -35.90 5 1 ASP A 192 ? ? -151.36 56.23 6 1 THR A 193 ? ? -39.40 123.23 7 1 PRO A 194 ? ? -48.79 99.11 8 1 GLU A 195 ? ? -47.45 -19.59 9 1 TYR A 201 ? ? -39.75 -39.16 10 1 PRO A 214 ? ? -48.95 -158.08 11 1 MET A 215 ? ? 158.61 125.11 12 1 ASP A 216 ? ? -62.73 71.78 13 1 LYS A 221 ? ? -119.35 -156.43 14 1 ARG A 223 ? ? 4.37 -106.36 15 1 PHE A 225 ? ? -135.40 -128.95 16 1 GLU A 232 ? ? -90.85 -157.64 17 1 LYS A 243 ? ? -14.72 -50.17 18 1 ASN A 246 ? ? -113.26 74.28 19 1 VAL A 256 ? ? -37.41 99.07 20 1 ALA A 257 ? ? -44.98 -171.57 21 1 MET A 258 ? ? 171.76 144.06 22 2 LYS A 182 ? ? -151.86 -34.83 23 2 LEU A 189 ? ? -173.33 -144.80 24 2 PRO A 191 ? ? -28.77 -37.68 25 2 ASP A 192 ? ? -151.40 54.23 26 2 THR A 193 ? ? -39.87 123.87 27 2 PRO A 194 ? ? -51.20 101.95 28 2 PRO A 214 ? ? -47.81 -167.22 29 2 MET A 215 ? ? 154.67 120.80 30 2 ASP A 216 ? ? -35.43 85.19 31 2 THR A 219 ? ? -143.24 -13.19 32 2 LYS A 221 ? ? -117.90 -155.30 33 2 ARG A 223 ? ? 10.87 -93.40 34 2 PHE A 225 ? ? -144.27 -121.73 35 2 LYS A 231 ? ? -39.33 -37.13 36 2 GLU A 232 ? ? -89.09 -155.56 37 2 GLU A 233 ? ? -142.33 -0.93 38 2 LYS A 243 ? ? -15.53 -50.08 39 2 VAL A 256 ? ? -34.52 116.57 40 2 MET A 258 ? ? -152.34 -151.25 41 3 LYS A 182 ? ? -151.20 -34.90 42 3 ILE A 184 ? ? -166.45 111.77 43 3 LEU A 189 ? ? -174.07 -142.51 44 3 PRO A 191 ? ? -31.96 -33.04 45 3 ASP A 192 ? ? -150.99 53.34 46 3 PRO A 194 ? ? -52.01 94.28 47 3 PRO A 214 ? ? -50.51 -167.54 48 3 MET A 215 ? ? 160.09 138.27 49 3 ASP A 216 ? ? -63.53 82.14 50 3 THR A 219 ? ? -152.30 -26.91 51 3 ASN A 220 ? ? 76.86 50.82 52 3 ARG A 223 ? ? 13.93 -85.23 53 3 PHE A 225 ? ? -145.87 -119.98 54 3 LYS A 231 ? ? -39.64 -35.30 55 3 GLU A 232 ? ? -88.89 -156.74 56 3 GLU A 233 ? ? -144.16 12.77 57 3 GLU A 234 ? ? -92.29 -63.29 58 3 LYS A 243 ? ? -14.97 -50.31 59 3 VAL A 256 ? ? -30.55 120.01 60 4 LYS A 182 ? ? -150.21 -36.46 61 4 LEU A 189 ? ? -174.67 -144.67 62 4 PRO A 191 ? ? -28.18 -36.15 63 4 ASP A 192 ? ? -150.85 56.45 64 4 THR A 193 ? ? -38.80 132.57 65 4 PRO A 194 ? ? -56.42 92.29 66 4 PRO A 214 ? ? -46.00 -164.61 67 4 MET A 215 ? ? 158.78 129.68 68 4 ASP A 216 ? ? -61.82 72.84 69 4 THR A 219 ? ? -151.49 -25.31 70 4 ASN A 220 ? ? 72.41 44.52 71 4 LYS A 221 ? ? -117.96 -155.52 72 4 ARG A 223 ? ? 8.01 -96.47 73 4 PHE A 225 ? ? -138.38 -120.20 74 4 LYS A 231 ? ? -38.51 -36.59 75 4 GLU A 232 ? ? -88.82 -153.88 76 4 LYS A 243 ? ? -15.43 -48.34 77 4 ASN A 246 ? ? -105.26 75.50 78 4 VAL A 256 ? ? -33.62 122.58 79 4 MET A 258 ? ? -151.15 -148.63 80 5 LYS A 182 ? ? -150.04 -34.58 81 5 ILE A 184 ? ? -168.75 110.09 82 5 LEU A 189 ? ? -165.56 -157.66 83 5 PRO A 191 ? ? -32.46 -29.02 84 5 ASP A 192 ? ? -149.38 52.58 85 5 PRO A 194 ? ? -53.10 94.13 86 5 SER A 210 ? ? -172.42 147.18 87 5 PRO A 214 ? ? -43.81 -165.17 88 5 MET A 215 ? ? 155.94 119.94 89 5 ASP A 216 ? ? -44.80 83.99 90 5 THR A 219 ? ? -141.97 -9.31 91 5 ARG A 223 ? ? 15.81 -83.16 92 5 PHE A 225 ? ? -151.02 -121.04 93 5 GLU A 232 ? ? -89.42 -155.59 94 5 ILE A 239 ? ? -28.95 -63.58 95 5 LYS A 243 ? ? -15.18 -50.55 96 5 ASN A 246 ? ? -107.43 79.75 97 5 GLU A 253 ? ? -69.86 93.12 98 5 VAL A 256 ? ? -28.72 110.78 99 5 MET A 258 ? ? -150.02 -151.75 100 6 LYS A 182 ? ? -152.19 -35.66 101 6 ILE A 184 ? ? -161.82 111.73 102 6 LEU A 189 ? ? -168.08 -157.16 103 6 PRO A 191 ? ? -29.29 -32.42 104 6 ASP A 192 ? ? -150.72 54.53 105 6 PRO A 194 ? ? -50.32 92.96 106 6 SER A 210 ? ? -172.03 147.25 107 6 PRO A 214 ? ? -43.05 -169.18 108 6 MET A 215 ? ? 158.02 121.72 109 6 ASP A 216 ? ? -51.99 85.58 110 6 ASN A 220 ? ? 71.85 53.28 111 6 ARG A 223 ? ? 17.65 -85.46 112 6 PHE A 225 ? ? -150.78 -121.16 113 6 GLU A 232 ? ? -89.49 -155.84 114 6 ILE A 239 ? ? -29.95 -62.81 115 6 LYS A 243 ? ? -15.77 -49.54 116 6 VAL A 256 ? ? -30.54 116.51 117 6 MET A 258 ? ? 170.03 -86.74 118 7 LYS A 182 ? ? -151.26 -36.38 119 7 ILE A 184 ? ? -161.34 114.93 120 7 LEU A 189 ? ? -173.93 -143.67 121 7 PRO A 191 ? ? -27.80 -36.19 122 7 ASP A 192 ? ? -150.59 54.84 123 7 THR A 193 ? ? -39.68 120.70 124 7 PRO A 194 ? ? -50.35 99.22 125 7 PRO A 214 ? ? -49.14 -161.92 126 7 MET A 215 ? ? 153.95 131.29 127 7 ASP A 216 ? ? -58.43 75.46 128 7 THR A 219 ? ? -151.73 -37.68 129 7 ASN A 220 ? ? 91.32 57.77 130 7 ARG A 223 ? ? 7.41 -87.39 131 7 PHE A 225 ? ? -140.54 -119.64 132 7 GLU A 232 ? ? -89.21 -158.24 133 7 GLU A 233 ? ? -141.09 11.60 134 7 LYS A 243 ? ? -14.96 -48.25 135 7 VAL A 256 ? ? -35.21 120.39 136 7 MET A 258 ? ? 173.84 -90.11 137 8 LYS A 182 ? ? -151.63 -35.35 138 8 ILE A 184 ? ? -166.46 110.10 139 8 LEU A 189 ? ? -177.70 -146.45 140 8 PRO A 191 ? ? -30.72 -33.51 141 8 ASP A 192 ? ? -151.45 55.80 142 8 THR A 193 ? ? -39.19 123.21 143 8 PRO A 194 ? ? -49.51 88.32 144 8 GLU A 195 ? ? -39.74 -25.99 145 8 PRO A 214 ? ? -43.07 -165.39 146 8 MET A 215 ? ? 156.93 117.09 147 8 ASP A 216 ? ? -51.73 81.04 148 8 THR A 219 ? ? -151.95 -20.13 149 8 ASN A 220 ? ? 74.74 42.77 150 8 LYS A 221 ? ? -119.65 -152.66 151 8 ARG A 223 ? ? 12.48 -82.17 152 8 PHE A 225 ? ? -142.91 -118.76 153 8 LYS A 243 ? ? -15.46 -49.69 154 8 VAL A 256 ? ? -31.01 118.02 155 8 MET A 258 ? ? -147.41 -151.41 156 9 LYS A 182 ? ? -152.56 -35.48 157 9 ILE A 184 ? ? -163.64 114.44 158 9 LEU A 189 ? ? -172.15 -145.04 159 9 PRO A 191 ? ? -31.68 -30.79 160 9 ASP A 192 ? ? -150.43 52.76 161 9 PRO A 194 ? ? -52.17 92.14 162 9 GLU A 195 ? ? -39.75 -27.73 163 9 TYR A 201 ? ? -39.35 -39.06 164 9 PRO A 214 ? ? -46.71 -165.75 165 9 MET A 215 ? ? 156.46 130.50 166 9 ASP A 216 ? ? -50.13 82.77 167 9 THR A 219 ? ? -151.21 -20.43 168 9 ASN A 220 ? ? 71.35 45.94 169 9 LYS A 221 ? ? -116.65 -154.42 170 9 ARG A 223 ? ? 6.87 -98.78 171 9 PHE A 225 ? ? -138.49 -123.26 172 9 GLU A 234 ? ? -92.60 -63.06 173 9 ILE A 239 ? ? -29.80 -60.25 174 9 LYS A 243 ? ? -17.05 -47.37 175 9 ASN A 246 ? ? -107.60 78.37 176 9 VAL A 256 ? ? -34.64 115.28 177 9 MET A 258 ? ? -170.19 139.66 178 10 LYS A 182 ? ? -150.77 -35.92 179 10 ILE A 184 ? ? -165.04 109.88 180 10 LEU A 189 ? ? -175.12 -145.87 181 10 PRO A 191 ? ? -29.69 -34.86 182 10 ASP A 192 ? ? -151.79 56.97 183 10 THR A 193 ? ? -39.48 125.79 184 10 PRO A 194 ? ? -53.61 95.16 185 10 MET A 215 ? ? 164.43 172.17 186 10 ASN A 220 ? ? 71.22 55.09 187 10 ARG A 223 ? ? 6.39 -84.99 188 10 PHE A 225 ? ? -143.98 -120.76 189 10 GLU A 232 ? ? -89.09 -157.05 190 10 GLU A 233 ? ? -143.15 12.81 191 10 GLU A 234 ? ? -91.59 -61.73 192 10 LYS A 243 ? ? -15.16 -49.71 193 10 VAL A 256 ? ? -27.88 120.59 194 11 LYS A 182 ? ? -150.33 -34.39 195 11 ILE A 184 ? ? -162.70 117.57 196 11 LEU A 189 ? ? -168.81 -159.22 197 11 PRO A 191 ? ? -31.02 -29.25 198 11 ASP A 192 ? ? -148.57 53.52 199 11 THR A 193 ? ? -39.83 134.15 200 11 PRO A 194 ? ? -52.66 83.31 201 11 GLU A 195 ? ? -39.58 -27.02 202 11 SER A 210 ? ? -173.17 148.99 203 11 PRO A 214 ? ? -48.18 -161.67 204 11 MET A 215 ? ? 155.86 122.53 205 11 ASP A 216 ? ? -59.81 74.07 206 11 THR A 219 ? ? -151.86 -24.98 207 11 ASN A 220 ? ? 75.06 40.99 208 11 LYS A 221 ? ? -116.12 -155.82 209 11 ARG A 223 ? ? 7.47 -96.29 210 11 PHE A 225 ? ? -140.14 -120.40 211 11 GLU A 232 ? ? -90.19 -154.87 212 11 LYS A 243 ? ? -16.05 -47.79 213 11 ASN A 246 ? ? -107.63 79.60 214 11 VAL A 256 ? ? -29.74 117.66 215 11 MET A 258 ? ? -175.93 142.21 216 12 LYS A 182 ? ? -150.57 -35.36 217 12 ILE A 184 ? ? -162.45 115.41 218 12 LEU A 189 ? ? -176.46 -147.11 219 12 PRO A 191 ? ? -32.03 -28.98 220 12 ASP A 192 ? ? -149.68 53.09 221 12 THR A 193 ? ? -39.91 124.75 222 12 PRO A 194 ? ? -48.58 94.27 223 12 PRO A 214 ? ? -69.64 -172.32 224 12 MET A 215 ? ? 156.08 107.14 225 12 ASP A 216 ? ? -14.91 78.95 226 12 THR A 219 ? ? -151.01 -5.37 227 12 ARG A 223 ? ? 26.36 -91.41 228 12 PHE A 225 ? ? -131.26 -130.60 229 12 LYS A 231 ? ? -39.39 -36.63 230 12 GLU A 232 ? ? -88.44 -155.87 231 12 GLU A 233 ? ? -144.97 11.40 232 12 LYS A 243 ? ? -15.78 -48.34 233 12 ASN A 246 ? ? -119.75 74.26 234 12 VAL A 256 ? ? -33.73 115.41 235 12 ALA A 257 ? ? -67.90 -179.96 236 12 MET A 258 ? ? 176.90 149.52 237 13 LYS A 182 ? ? -151.27 -35.41 238 13 ILE A 184 ? ? -166.03 111.10 239 13 LEU A 189 ? ? -168.64 -158.89 240 13 PRO A 191 ? ? -29.63 -32.09 241 13 ASP A 192 ? ? -150.65 54.75 242 13 THR A 193 ? ? -39.77 134.10 243 13 PRO A 194 ? ? -55.10 89.69 244 13 SER A 210 ? ? -171.77 148.10 245 13 PRO A 214 ? ? -48.06 -170.02 246 13 MET A 215 ? ? 157.70 141.20 247 13 ASP A 216 ? ? -51.03 87.10 248 13 THR A 219 ? ? -143.54 -6.89 249 13 ASN A 220 ? ? 71.42 52.29 250 13 ARG A 223 ? ? 17.41 -81.83 251 13 PHE A 225 ? ? -151.22 -120.57 252 13 GLU A 234 ? ? -92.40 -62.07 253 13 ILE A 239 ? ? -28.19 -60.65 254 13 LYS A 243 ? ? -14.44 -50.42 255 13 ASN A 246 ? ? -103.54 79.32 256 13 VAL A 256 ? ? -27.87 119.97 257 13 MET A 258 ? ? 176.68 -87.01 258 14 LYS A 182 ? ? -150.81 -33.55 259 14 LYS A 183 ? ? -104.90 -166.96 260 14 LEU A 189 ? ? -169.90 -144.85 261 14 PRO A 191 ? ? -29.66 -31.39 262 14 ASP A 192 ? ? -151.14 54.20 263 14 PRO A 194 ? ? -49.90 101.54 264 14 GLU A 195 ? ? -48.38 -18.28 265 14 PRO A 214 ? ? -50.49 -164.50 266 14 MET A 215 ? ? 161.75 128.33 267 14 ASP A 216 ? ? -58.19 80.93 268 14 ASN A 217 ? ? -147.23 11.46 269 14 LYS A 218 ? ? -134.15 -30.22 270 14 ASN A 220 ? ? 70.39 46.44 271 14 ARG A 223 ? ? 23.51 -89.55 272 14 PHE A 225 ? ? -130.10 -130.15 273 14 GLU A 232 ? ? -89.06 -155.48 274 14 LYS A 243 ? ? -17.34 -47.77 275 14 VAL A 256 ? ? -36.25 101.45 276 14 ALA A 257 ? ? -45.38 -171.91 277 14 MET A 258 ? ? -162.70 -156.00 278 15 LYS A 182 ? ? -150.31 -35.03 279 15 ILE A 184 ? ? -165.33 117.39 280 15 LEU A 189 ? ? -166.07 -157.63 281 15 PRO A 191 ? ? -29.76 -31.28 282 15 ASP A 192 ? ? -150.41 54.20 283 15 PRO A 194 ? ? -49.20 90.40 284 15 SER A 210 ? ? -174.06 147.60 285 15 PRO A 214 ? ? -48.41 -167.26 286 15 MET A 215 ? ? 154.82 125.49 287 15 ASP A 216 ? ? -51.25 83.03 288 15 LYS A 218 ? ? -141.86 -0.88 289 15 THR A 219 ? ? -152.46 -26.49 290 15 ASN A 220 ? ? 78.88 53.43 291 15 LYS A 221 ? ? -129.35 -158.65 292 15 ARG A 223 ? ? 19.07 -94.56 293 15 PHE A 225 ? ? -147.58 -123.14 294 15 GLU A 232 ? ? -89.03 -155.97 295 15 GLU A 233 ? ? -141.17 -2.59 296 15 LYS A 243 ? ? -15.76 -48.18 297 15 ASN A 246 ? ? -117.18 79.56 298 15 VAL A 256 ? ? -29.17 119.65 299 16 LYS A 182 ? ? -148.34 -35.42 300 16 ILE A 184 ? ? -162.38 117.79 301 16 LEU A 189 ? ? -175.42 -143.17 302 16 PRO A 191 ? ? -28.78 -39.70 303 16 ASP A 192 ? ? -151.50 56.49 304 16 THR A 193 ? ? -39.21 127.95 305 16 PRO A 194 ? ? -50.53 96.94 306 16 GLU A 195 ? ? -39.75 -28.08 307 16 SER A 210 ? ? -171.22 148.43 308 16 PRO A 214 ? ? -51.44 -160.99 309 16 MET A 215 ? ? 153.39 127.52 310 16 ASP A 216 ? ? -54.62 82.37 311 16 THR A 219 ? ? -152.12 -24.80 312 16 ASN A 220 ? ? 75.29 41.28 313 16 LYS A 221 ? ? -116.37 -158.96 314 16 ARG A 223 ? ? 12.76 -79.41 315 16 PHE A 225 ? ? -149.92 -119.85 316 16 GLU A 234 ? ? -91.64 -64.88 317 16 ILE A 239 ? ? -29.59 -64.28 318 16 LYS A 243 ? ? -15.62 -48.51 319 16 ASN A 246 ? ? -112.74 77.23 320 16 LEU A 249 ? ? -132.04 -41.61 321 16 VAL A 256 ? ? -33.73 120.45 322 16 MET A 258 ? ? -164.18 -156.43 323 17 LYS A 182 ? ? -151.44 -35.17 324 17 ILE A 184 ? ? -165.86 108.53 325 17 LEU A 189 ? ? 169.63 -139.80 326 17 PRO A 191 ? ? -32.63 -30.17 327 17 ASP A 192 ? ? -151.29 54.79 328 17 THR A 193 ? ? -39.54 128.51 329 17 PRO A 194 ? ? -52.29 96.33 330 17 GLU A 195 ? ? -46.31 -17.54 331 17 SER A 210 ? ? -174.27 149.19 332 17 PRO A 214 ? ? -49.47 -167.19 333 17 MET A 215 ? ? 155.99 130.96 334 17 ASP A 216 ? ? -52.87 83.80 335 17 THR A 219 ? ? -151.69 -25.26 336 17 ASN A 220 ? ? 73.86 43.52 337 17 ARG A 223 ? ? 20.87 -83.36 338 17 PHE A 225 ? ? -149.93 -116.73 339 17 LYS A 231 ? ? -38.67 -35.34 340 17 GLU A 232 ? ? -88.60 -153.63 341 17 GLU A 233 ? ? -148.44 13.27 342 17 ILE A 239 ? ? -28.20 -63.02 343 17 LYS A 243 ? ? -14.49 -50.56 344 17 VAL A 256 ? ? -30.57 122.75 345 18 LYS A 182 ? ? -152.55 -34.97 346 18 ILE A 184 ? ? -161.10 112.07 347 18 LEU A 189 ? ? -171.08 -145.41 348 18 PRO A 191 ? ? -29.70 -33.22 349 18 ASP A 192 ? ? -150.92 54.33 350 18 THR A 193 ? ? -39.95 122.54 351 18 PRO A 194 ? ? -53.81 98.56 352 18 PRO A 214 ? ? -44.01 -166.91 353 18 MET A 215 ? ? 159.13 132.81 354 18 ASP A 216 ? ? -65.28 81.77 355 18 THR A 219 ? ? -152.00 -26.36 356 18 ASN A 220 ? ? 73.93 52.00 357 18 ARG A 223 ? ? 17.63 -86.01 358 18 PHE A 225 ? ? -150.86 -121.21 359 18 LYS A 243 ? ? -18.61 -47.79 360 18 ASN A 246 ? ? -151.54 81.32 361 18 VAL A 256 ? ? -32.91 110.23 362 18 ALA A 257 ? ? -67.71 -174.90 363 18 MET A 258 ? ? -179.52 -94.08 364 19 LYS A 182 ? ? -150.32 -34.02 365 19 LYS A 183 ? ? -103.53 -168.52 366 19 LEU A 189 ? ? -170.59 -154.21 367 19 PRO A 191 ? ? -31.30 -33.32 368 19 ASP A 192 ? ? -150.98 56.67 369 19 THR A 193 ? ? -39.13 128.97 370 19 PRO A 194 ? ? -47.16 97.69 371 19 GLU A 195 ? ? -48.02 -17.95 372 19 TYR A 201 ? ? -39.65 -37.16 373 19 GLU A 212 ? ? -172.43 128.19 374 19 PRO A 214 ? ? -56.68 -162.18 375 19 MET A 215 ? ? 159.67 106.56 376 19 ASP A 216 ? ? -40.22 84.83 377 19 THR A 219 ? ? -151.58 -18.29 378 19 ASN A 220 ? ? 74.18 49.27 379 19 ARG A 223 ? ? 26.04 -97.34 380 19 PHE A 225 ? ? -140.04 -131.32 381 19 GLU A 232 ? ? -88.84 -158.68 382 19 LYS A 243 ? ? -14.45 -50.70 383 19 ASN A 246 ? ? -114.25 74.21 384 19 VAL A 256 ? ? -36.11 100.34 385 19 ALA A 257 ? ? -45.37 -171.08 386 19 MET A 258 ? ? 173.46 148.67 387 20 LYS A 182 ? ? -150.41 -35.16 388 20 ILE A 184 ? ? -161.08 114.75 389 20 LEU A 189 ? ? -178.82 -143.79 390 20 PRO A 191 ? ? -27.36 -35.36 391 20 ASP A 192 ? ? -150.96 54.90 392 20 PRO A 194 ? ? -47.13 101.62 393 20 PRO A 214 ? ? -66.66 -167.00 394 20 MET A 215 ? ? 167.69 164.70 395 20 THR A 219 ? ? -151.75 -16.52 396 20 ARG A 223 ? ? 2.05 -80.02 397 20 PHE A 225 ? ? -138.71 -121.38 398 20 GLU A 232 ? ? -88.59 -155.93 399 20 LYS A 243 ? ? -15.51 -49.31 400 20 ASN A 246 ? ? -115.51 76.38 401 20 VAL A 256 ? ? -33.82 122.32 402 20 MET A 258 ? ? 175.81 153.95 # _ndb_struct_conf_na.entry_id 1WTB _ndb_struct_conf_na.feature 'double helix' # _ndb_struct_na_base_pair.model_number 1 _ndb_struct_na_base_pair.i_label_asym_id A _ndb_struct_na_base_pair.i_label_comp_id DA _ndb_struct_na_base_pair.i_label_seq_id 2 _ndb_struct_na_base_pair.i_symmetry 1_555 _ndb_struct_na_base_pair.j_label_asym_id A _ndb_struct_na_base_pair.j_label_comp_id DG _ndb_struct_na_base_pair.j_label_seq_id 3 _ndb_struct_na_base_pair.j_symmetry 1_555 _ndb_struct_na_base_pair.shear -3.914 _ndb_struct_na_base_pair.stretch 5.918 _ndb_struct_na_base_pair.stagger 1.499 _ndb_struct_na_base_pair.buckle 16.134 _ndb_struct_na_base_pair.propeller 26.901 _ndb_struct_na_base_pair.opening -128.697 _ndb_struct_na_base_pair.pair_number 1 _ndb_struct_na_base_pair.pair_name B_DA3:DG4_B _ndb_struct_na_base_pair.i_auth_asym_id B _ndb_struct_na_base_pair.i_auth_seq_id 3 _ndb_struct_na_base_pair.i_PDB_ins_code ? _ndb_struct_na_base_pair.j_auth_asym_id B _ndb_struct_na_base_pair.j_auth_seq_id 4 _ndb_struct_na_base_pair.j_PDB_ins_code ? _ndb_struct_na_base_pair.hbond_type_28 ? _ndb_struct_na_base_pair.hbond_type_12 ? #