HEADER ELECTRON TRANSPORT 22-NOV-04 1WTF TITLE CRYSTAL STRUCTURE OF BACILLUS THERMOPROTEOLYTICUS FERREDOXIN VARIANTS TITLE 2 CONTAINING UNEXPECTED [3FE-4S] CLUSTER THAT IS LINKED TO COENZYME A TITLE 3 AT 1.6 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERREDOXIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS THERMOPROTEOLYTICUS; SOURCE 3 ORGANISM_TAXID: 1427; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: C41(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-21A(+) KEYWDS 3FE-4S CLUSTER, COENZYME A, FERREDOXIN, COMPLEX, ELECTRON TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR T.SHIRAKAWA,Y.TAKAHASHI,K.WADA,J.HIROTA,T.TAKAO,D.OHMORI,K.FUKUYAMA REVDAT 3 13-NOV-24 1WTF 1 REMARK LINK REVDAT 2 24-FEB-09 1WTF 1 VERSN REVDAT 1 08-NOV-05 1WTF 0 JRNL AUTH T.SHIRAKAWA,Y.TAKAHASHI,K.WADA,J.HIROTA,T.TAKAO,D.OHMORI, JRNL AUTH 2 K.FUKUYAMA JRNL TITL IDENTIFICATION OF VARIANT MOLECULES OF BACILLUS JRNL TITL 2 THERMOPROTEOLYTICUS FERREDOXIN: CRYSTAL STRUCTURE REVEALS JRNL TITL 3 BOUND COENZYME A AND AN UNEXPECTED [3FE-4S] CLUSTER JRNL TITL 4 ASSOCIATED WITH A CANONICAL [4FE-4S] LIGAND MOTIF JRNL REF BIOCHEMISTRY V. 44 12402 2005 JRNL REFN ISSN 0006-2960 JRNL PMID 16156653 JRNL DOI 10.1021/BI0508441 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.84 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 763977.200 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 48081 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 4844 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.70 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 6996 REMARK 3 BIN R VALUE (WORKING SET) : 0.2020 REMARK 3 BIN FREE R VALUE : 0.2460 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 752 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.009 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2448 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 91 REMARK 3 SOLVENT ATOMS : 760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.74000 REMARK 3 B22 (A**2) : 5.48000 REMARK 3 B33 (A**2) : -3.74000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.16 REMARK 3 ESD FROM SIGMAA (A) : -0.0 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.20 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.04 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.020 REMARK 3 BOND ANGLES (DEGREES) : 2.000 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 3.750 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.750 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.300 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.110 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.150 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.39 REMARK 3 BSOL : 40.43 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : FS3_PAR REMARK 3 PARAMETER FILE 3 : COA_XPLOR_PAR.TXT REMARK 3 PARAMETER FILE 4 : SO4_XPLOR_PAR.TXT REMARK 3 PARAMETER FILE 5 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : &_1_TOPOLOGY_INFILE_2 REMARK 3 TOPOLOGY FILE 3 : &_1_TOPOLOGY_INFILE_3 REMARK 3 TOPOLOGY FILE 4 : &_1_TOPOLOGY_INFILE_4 REMARK 3 TOPOLOGY FILE 5 : &_1_TOPOLOGY_INFILE_5 REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WTF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-NOV-04. REMARK 100 THE DEPOSITION ID IS D_1000023979. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JAN-04; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; NULL REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SPRING-8; SPRING-8 REMARK 200 BEAMLINE : BL41XU; BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.000; 1.500 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; NULL REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH; NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49210 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : 0.06200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.06200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 7.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, PH 7.8, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.69350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A MONOMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 38 32.66 -156.77 REMARK 500 ASP B 38 37.75 -158.57 REMARK 500 ASP C 38 31.82 -150.34 REMARK 500 ASP D 38 33.45 -154.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S A1001 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 11 SG REMARK 620 2 F3S A1001 S1 114.7 REMARK 620 3 F3S A1001 S3 120.3 103.4 REMARK 620 4 F3S A1001 S4 102.3 112.1 103.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S A1001 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 17 SG REMARK 620 2 F3S A1001 S2 113.6 REMARK 620 3 F3S A1001 S3 116.7 102.4 REMARK 620 4 F3S A1001 S4 111.7 109.6 101.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S A1001 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 61 SG REMARK 620 2 F3S A1001 S1 111.0 REMARK 620 3 F3S A1001 S2 111.0 114.6 REMARK 620 4 F3S A1001 S3 114.5 101.7 103.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S B1002 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 11 SG REMARK 620 2 F3S B1002 S2 105.8 REMARK 620 3 F3S B1002 S3 118.5 101.9 REMARK 620 4 F3S B1002 S4 116.0 110.3 103.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S B1002 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 17 SG REMARK 620 2 F3S B1002 S1 113.8 REMARK 620 3 F3S B1002 S2 108.9 109.7 REMARK 620 4 F3S B1002 S3 117.4 104.2 102.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S B1002 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 61 SG REMARK 620 2 F3S B1002 S1 110.9 REMARK 620 3 F3S B1002 S3 115.7 103.8 REMARK 620 4 F3S B1002 S4 111.3 112.4 102.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S C1003 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 11 SG REMARK 620 2 F3S C1003 S1 116.3 REMARK 620 3 F3S C1003 S3 119.3 103.8 REMARK 620 4 F3S C1003 S4 102.6 112.0 102.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S C1003 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 17 SG REMARK 620 2 F3S C1003 S2 112.5 REMARK 620 3 F3S C1003 S3 117.0 103.7 REMARK 620 4 F3S C1003 S4 111.0 109.6 102.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S C1003 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 61 SG REMARK 620 2 F3S C1003 S1 112.2 REMARK 620 3 F3S C1003 S2 112.1 112.3 REMARK 620 4 F3S C1003 S3 113.3 103.2 103.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S D1004 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 11 SG REMARK 620 2 F3S D1004 S1 103.4 REMARK 620 3 F3S D1004 S2 117.0 110.3 REMARK 620 4 F3S D1004 S3 119.5 103.4 102.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S D1004 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 17 SG REMARK 620 2 F3S D1004 S1 110.6 REMARK 620 3 F3S D1004 S3 116.0 102.6 REMARK 620 4 F3S D1004 S4 113.3 108.7 104.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S D1004 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 61 SG REMARK 620 2 F3S D1004 S2 114.7 REMARK 620 3 F3S D1004 S3 114.0 100.6 REMARK 620 4 F3S D1004 S4 110.8 111.7 104.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 82 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 82 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 83 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA A 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE F3S A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE F3S B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE F3S C 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE F3S D 1004 DBREF 1WTF A 1 81 UNP P10245 FER_BACTH 1 81 DBREF 1WTF B 1 81 UNP P10245 FER_BACTH 1 81 DBREF 1WTF C 1 81 UNP P10245 FER_BACTH 1 81 DBREF 1WTF D 1 81 UNP P10245 FER_BACTH 1 81 SEQRES 1 A 81 PRO LYS TYR THR ILE VAL ASP LYS GLU THR CYS ILE ALA SEQRES 2 A 81 CYS GLY ALA CYS GLY ALA ALA ALA PRO ASP ILE TYR ASP SEQRES 3 A 81 TYR ASP GLU ASP GLY ILE ALA TYR VAL THR LEU ASP ASP SEQRES 4 A 81 ASN GLN GLY ILE VAL GLU VAL PRO ASP ILE LEU ILE ASP SEQRES 5 A 81 ASP MET MET ASP ALA PHE GLU GLY CYS PRO THR ASP SER SEQRES 6 A 81 ILE LYS VAL ALA ASP GLU PRO PHE ASP GLY ASP PRO ASN SEQRES 7 A 81 LYS PHE GLU SEQRES 1 B 81 PRO LYS TYR THR ILE VAL ASP LYS GLU THR CYS ILE ALA SEQRES 2 B 81 CYS GLY ALA CYS GLY ALA ALA ALA PRO ASP ILE TYR ASP SEQRES 3 B 81 TYR ASP GLU ASP GLY ILE ALA TYR VAL THR LEU ASP ASP SEQRES 4 B 81 ASN GLN GLY ILE VAL GLU VAL PRO ASP ILE LEU ILE ASP SEQRES 5 B 81 ASP MET MET ASP ALA PHE GLU GLY CYS PRO THR ASP SER SEQRES 6 B 81 ILE LYS VAL ALA ASP GLU PRO PHE ASP GLY ASP PRO ASN SEQRES 7 B 81 LYS PHE GLU SEQRES 1 C 81 PRO LYS TYR THR ILE VAL ASP LYS GLU THR CYS ILE ALA SEQRES 2 C 81 CYS GLY ALA CYS GLY ALA ALA ALA PRO ASP ILE TYR ASP SEQRES 3 C 81 TYR ASP GLU ASP GLY ILE ALA TYR VAL THR LEU ASP ASP SEQRES 4 C 81 ASN GLN GLY ILE VAL GLU VAL PRO ASP ILE LEU ILE ASP SEQRES 5 C 81 ASP MET MET ASP ALA PHE GLU GLY CYS PRO THR ASP SER SEQRES 6 C 81 ILE LYS VAL ALA ASP GLU PRO PHE ASP GLY ASP PRO ASN SEQRES 7 C 81 LYS PHE GLU SEQRES 1 D 81 PRO LYS TYR THR ILE VAL ASP LYS GLU THR CYS ILE ALA SEQRES 2 D 81 CYS GLY ALA CYS GLY ALA ALA ALA PRO ASP ILE TYR ASP SEQRES 3 D 81 TYR ASP GLU ASP GLY ILE ALA TYR VAL THR LEU ASP ASP SEQRES 4 D 81 ASN GLN GLY ILE VAL GLU VAL PRO ASP ILE LEU ILE ASP SEQRES 5 D 81 ASP MET MET ASP ALA PHE GLU GLY CYS PRO THR ASP SER SEQRES 6 D 81 ILE LYS VAL ALA ASP GLU PRO PHE ASP GLY ASP PRO ASN SEQRES 7 D 81 LYS PHE GLU HET SO4 A 82 5 HET SO4 A 83 5 HET COA A 105 48 HET F3S A1001 7 HET SO4 B 82 5 HET F3S B1002 7 HET F3S C1003 7 HET F3S D1004 7 HETNAM SO4 SULFATE ION HETNAM COA COENZYME A HETNAM F3S FE3-S4 CLUSTER FORMUL 5 SO4 3(O4 S 2-) FORMUL 7 COA C21 H36 N7 O16 P3 S FORMUL 8 F3S 4(FE3 S4) FORMUL 13 HOH *760(H2 O) HELIX 1 1 GLY A 15 ALA A 21 1 7 HELIX 2 2 PRO A 47 ILE A 49 5 3 HELIX 3 3 LEU A 50 CYS A 61 1 12 HELIX 4 4 GLY B 15 ALA B 21 1 7 HELIX 5 5 PRO B 47 ILE B 49 5 3 HELIX 6 6 LEU B 50 CYS B 61 1 12 HELIX 7 7 GLY C 15 ALA C 21 1 7 HELIX 8 8 PRO C 47 ILE C 49 5 3 HELIX 9 9 LEU C 50 CYS C 61 1 12 HELIX 10 10 GLY D 15 ALA D 21 1 7 HELIX 11 11 PRO D 47 ILE D 49 5 3 HELIX 12 12 LEU D 50 CYS D 61 1 12 SHEET 1 A 2 TYR A 3 VAL A 6 0 SHEET 2 A 2 ILE A 66 ALA A 69 -1 O LYS A 67 N ILE A 5 SHEET 1 B 2 TYR A 25 TYR A 27 0 SHEET 2 B 2 ALA A 33 VAL A 35 -1 O TYR A 34 N ASP A 26 SHEET 1 C 2 TYR B 3 VAL B 6 0 SHEET 2 C 2 ILE B 66 ALA B 69 -1 O LYS B 67 N ILE B 5 SHEET 1 D 2 TYR B 25 TYR B 27 0 SHEET 2 D 2 ALA B 33 VAL B 35 -1 O TYR B 34 N ASP B 26 SHEET 1 E 2 TYR C 3 VAL C 6 0 SHEET 2 E 2 ILE C 66 ALA C 69 -1 O LYS C 67 N ILE C 5 SHEET 1 F 2 TYR C 25 TYR C 27 0 SHEET 2 F 2 ALA C 33 VAL C 35 -1 O TYR C 34 N ASP C 26 SHEET 1 G 2 TYR D 3 VAL D 6 0 SHEET 2 G 2 ILE D 66 ALA D 69 -1 O ALA D 69 N TYR D 3 SHEET 1 H 2 TYR D 25 TYR D 27 0 SHEET 2 H 2 ALA D 33 VAL D 35 -1 O TYR D 34 N ASP D 26 LINK SG CYS A 14 S1P COA A 105 1555 1555 2.07 LINK SG CYS A 11 FE3 F3S A1001 1555 1555 2.30 LINK SG CYS A 17 FE4 F3S A1001 1555 1555 2.25 LINK SG CYS A 61 FE1 F3S A1001 1555 1555 2.31 LINK SG CYS B 11 FE4 F3S B1002 1555 1555 2.26 LINK SG CYS B 17 FE1 F3S B1002 1555 1555 2.31 LINK SG CYS B 61 FE3 F3S B1002 1555 1555 2.30 LINK SG CYS C 11 FE3 F3S C1003 1555 1555 2.32 LINK SG CYS C 17 FE4 F3S C1003 1555 1555 2.28 LINK SG CYS C 61 FE1 F3S C1003 1555 1555 2.33 LINK SG CYS D 11 FE1 F3S D1004 1555 1555 2.29 LINK SG CYS D 17 FE3 F3S D1004 1555 1555 2.31 LINK SG CYS D 61 FE4 F3S D1004 1555 1555 2.36 SITE 1 AC1 8 LYS B 8 ASP B 39 ASN B 40 GLN B 41 SITE 2 AC1 8 HOH B1016 HOH B1025 HOH B1052 HOH B1098 SITE 1 AC2 3 HOH A1101 HOH A1107 HOH A1122 SITE 1 AC3 8 ASP A 39 ASN A 40 GLN A 41 HOH A1011 SITE 2 AC3 8 HOH A1012 HOH A1063 HOH A1099 HOH A1197 SITE 1 AC4 14 ILE A 12 CYS A 14 GLY A 15 ALA A 16 SITE 2 AC4 14 HOH A1061 HOH A1064 HOH A1077 HOH A1078 SITE 3 AC4 14 HOH A1087 HOH A1090 HOH A1113 HOH A1133 SITE 4 AC4 14 HOH A1145 ILE B 12 SITE 1 AC5 10 CYS A 11 ILE A 12 ALA A 13 CYS A 14 SITE 2 AC5 10 GLY A 15 ALA A 16 CYS A 17 CYS A 61 SITE 3 AC5 10 THR A 63 ILE A 66 SITE 1 AC6 9 CYS B 11 ILE B 12 CYS B 14 GLY B 15 SITE 2 AC6 9 ALA B 16 CYS B 17 TYR B 27 CYS B 61 SITE 3 AC6 9 THR B 63 SITE 1 AC7 9 CYS C 11 ILE C 12 CYS C 14 GLY C 15 SITE 2 AC7 9 ALA C 16 CYS C 17 TYR C 27 CYS C 61 SITE 3 AC7 9 THR C 63 SITE 1 AC8 10 CYS D 11 ILE D 12 ALA D 13 CYS D 14 SITE 2 AC8 10 GLY D 15 ALA D 16 CYS D 17 TYR D 27 SITE 3 AC8 10 CYS D 61 THR D 63 CRYST1 52.461 63.387 56.857 90.00 95.06 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019062 0.000000 0.001688 0.00000 SCALE2 0.000000 0.015776 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017657 0.00000