HEADER OXIDOREDUCTASE/METAL TRANSPORT 19-JAN-05 1WX2 TITLE CRYSTAL STRUCTURE OF THE OXY-FORM OF THE COPPER-BOUND STREPTOMYCES TITLE 2 CASTANEOGLOBISPORUS TYROSINASE COMPLEXED WITH A CADDIE PROTEIN TITLE 3 PREPARED BY THE ADDITION OF HYDROGENPEROXIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.14.18.1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: MELC; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: CADDIE PROTEIN ORF378; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES CASTANEOGLOBISPORUS; SOURCE 3 ORGANISM_TAXID: 79261; SOURCE 4 GENE: TYRC; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-MEL2; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: STREPTOMYCES CASTANEOGLOBISPORUS; SOURCE 12 ORGANISM_TAXID: 79261; SOURCE 13 GENE: ORF378; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PET-MEL2 KEYWDS TYROSINASE, BINARY COMPLEX, TYPE-3 COPPER, DIOXYGEN, COPPER TRANSFER, KEYWDS 2 OXIDOREDUCTASE-METAL TRANSPORT COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.MATOBA,T.KUMAGAI,A.YAMAMOTO,H.YOSHITSU,M.SUGIYAMA REVDAT 5 25-OCT-23 1WX2 1 REMARK LINK REVDAT 4 16-NOV-11 1WX2 1 VERSN HETATM REVDAT 3 24-FEB-09 1WX2 1 VERSN REVDAT 2 11-APR-06 1WX2 1 JRNL REVDAT 1 31-JAN-06 1WX2 0 JRNL AUTH Y.MATOBA,T.KUMAGAI,A.YAMAMOTO,H.YOSHITSU,M.SUGIYAMA JRNL TITL CRYSTALLOGRAPHIC EVIDENCE THAT THE DINUCLEAR COPPER CENTER JRNL TITL 2 OF TYROSINASE IS FLEXIBLE DURING CATALYSIS JRNL REF J.BIOL.CHEM. V. 281 8981 2006 JRNL REFN ISSN 0021-9258 JRNL PMID 16436386 JRNL DOI 10.1074/JBC.M509785200 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0010 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 32193 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1598 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.91 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5031 REMARK 3 BIN R VALUE (WORKING SET) : 0.3460 REMARK 3 BIN FREE R VALUE : 0.3820 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 260 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.024 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2744 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 236 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM SIGMAA (A) : 0.31 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.28 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.32 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.660 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.950 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.810 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.350 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.420 ; 2.500 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : NO3.PARAM REMARK 3 PARAMETER FILE 3 : O2.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : TOPH19.SOL REMARK 3 TOPOLOGY FILE 3 : NO3.TOP REMARK 3 TOPOLOGY FILE 4 : O2.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 1WX2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-JAN-05. REMARK 100 THE DEPOSITION ID IS D_1000024102. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-DEC-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS VII REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR (MSC/RIGAKU) REMARK 200 DATA SCALING SOFTWARE : CRYSTALCLEAR (MSC/RIGAKU) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32279 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 41.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : 0.05000 REMARK 200 FOR THE DATA SET : 10.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.08 REMARK 200 R MERGE FOR SHELL (I) : 0.28000 REMARK 200 R SYM FOR SHELL (I) : 0.28000 REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: 1WXC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, SODIUM NITRATE, HEPES, PH REMARK 280 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 32.58000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.27500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.58000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.27500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 612 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 624 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 633 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 275 REMARK 465 HIS A 276 REMARK 465 HIS A 277 REMARK 465 HIS A 278 REMARK 465 HIS A 279 REMARK 465 HIS A 280 REMARK 465 HIS A 281 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 GLU B 3 REMARK 465 ILE B 4 REMARK 465 THR B 5 REMARK 465 ARG B 6 REMARK 465 ARG B 7 REMARK 465 ARG B 8 REMARK 465 ALA B 9 REMARK 465 LEU B 10 REMARK 465 THR B 11 REMARK 465 ALA B 12 REMARK 465 ALA B 13 REMARK 465 ALA B 14 REMARK 465 ALA B 15 REMARK 465 VAL B 16 REMARK 465 ALA B 17 REMARK 465 ALA B 18 REMARK 465 THR B 19 REMARK 465 ALA B 20 REMARK 465 SER B 21 REMARK 465 ALA B 22 REMARK 465 ALA B 23 REMARK 465 VAL B 24 REMARK 465 THR B 25 REMARK 465 LEU B 26 REMARK 465 ALA B 27 REMARK 465 ALA B 28 REMARK 465 PRO B 29 REMARK 465 ALA B 30 REMARK 465 ALA B 31 REMARK 465 SER B 32 REMARK 465 ALA B 33 REMARK 465 ALA B 34 REMARK 465 GLY B 35 REMARK 465 HIS B 36 REMARK 465 HIS B 37 REMARK 465 GLU B 38 REMARK 465 PRO B 39 REMARK 465 ARG B 60 REMARK 465 GLY B 61 REMARK 465 ALA B 62 REMARK 465 ALA B 63 REMARK 465 HIS B 64 REMARK 465 HIS B 65 REMARK 465 HIS B 66 REMARK 465 GLU B 67 REMARK 465 HIS B 68 REMARK 465 GLY B 69 REMARK 465 GLY B 70 REMARK 465 PHE B 123 REMARK 465 PRO B 124 REMARK 465 ALA B 125 REMARK 465 ASN B 126 REMARK 465 LEU B 127 REMARK 465 GLU B 128 REMARK 465 HIS B 129 REMARK 465 HIS B 130 REMARK 465 HIS B 131 REMARK 465 HIS B 132 REMARK 465 HIS B 133 REMARK 465 HIS B 134 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 52 -50.01 -123.16 REMARK 500 ARG A 55 46.81 39.08 REMARK 500 PHE A 103 -96.86 -132.94 REMARK 500 SER A 135 -24.14 -37.47 REMARK 500 PRO A 169 24.44 -78.36 REMARK 500 ASN A 188 108.59 68.21 REMARK 500 LEU A 189 -79.13 -101.66 REMARK 500 ASP A 243 -4.02 70.32 REMARK 500 ASN A 255 -14.52 78.79 REMARK 500 SER B 96 57.06 -159.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 400 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 38 NE2 REMARK 620 2 HIS A 54 NE2 93.5 REMARK 620 3 HIS A 63 NE2 115.2 96.4 REMARK 620 4 PER A 404 O2 129.1 108.8 107.3 REMARK 620 5 PER A 404 O1 85.6 132.0 127.2 45.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 401 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 190 NE2 REMARK 620 2 HIS A 194 NE2 98.0 REMARK 620 3 HIS A 216 NE2 94.5 117.5 REMARK 620 4 PER A 404 O1 142.8 101.8 103.7 REMARK 620 5 PER A 404 O2 101.6 131.9 104.2 42.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 402 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 82 NE2 REMARK 620 2 MET B 84 SD 111.5 REMARK 620 3 HIS B 97 NE2 152.4 95.7 REMARK 620 4 HOH B 644 O 70.6 144.6 90.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PER A 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1WX3 RELATED DB: PDB REMARK 900 THE MET-FORM OF THE COPPER-BOUND SAME PROTEIN REMARK 900 RELATED ID: 1WX4 RELATED DB: PDB REMARK 900 THE OXY-FORM OF THE COPPER-BOUND SAME PROTEIN PREPARED BY THE REMARK 900 ADDITION OF DITHIOTHREITOL REMARK 900 RELATED ID: 1WX5 RELATED DB: PDB REMARK 900 THE COPPER-FREE SAME PROTEIN IN THE MONOCLINIC CRYSTAL REMARK 900 RELATED ID: 1WXC RELATED DB: PDB REMARK 900 THE COPPER-FREE SAME PROTEIN DBREF 1WX2 A 1 273 UNP Q83WS2 Q83WS2_9ACTO 1 273 DBREF 1WX2 B 1 126 UNP Q83WS1 Q83WS1_9ACTO 1 126 SEQRES 1 A 281 MET THR VAL ARG LYS ASN GLN ALA THR LEU THR ALA ASP SEQRES 2 A 281 GLU LYS ARG ARG PHE VAL ALA ALA VAL LEU GLU LEU LYS SEQRES 3 A 281 ARG SER GLY ARG TYR ASP GLU PHE VAL ARG THR HIS ASN SEQRES 4 A 281 GLU PHE ILE MET SER ASP THR ASP SER GLY GLU ARG THR SEQRES 5 A 281 GLY HIS ARG SER PRO SER PHE LEU PRO TRP HIS ARG ARG SEQRES 6 A 281 PHE LEU LEU ASP PHE GLU GLN ALA LEU GLN SER VAL ASP SEQRES 7 A 281 SER SER VAL THR LEU PRO TYR TRP ASP TRP SER ALA ASP SEQRES 8 A 281 ARG THR VAL ARG ALA SER LEU TRP ALA PRO ASP PHE LEU SEQRES 9 A 281 GLY GLY THR GLY ARG SER THR ASP GLY ARG VAL MET ASP SEQRES 10 A 281 GLY PRO PHE ALA ALA SER THR GLY ASN TRP PRO ILE ASN SEQRES 11 A 281 VAL ARG VAL ASP SER ARG THR TYR LEU ARG ARG SER LEU SEQRES 12 A 281 GLY GLY SER VAL ALA GLU LEU PRO THR ARG ALA GLU VAL SEQRES 13 A 281 GLU SER VAL LEU ALA ILE SER ALA TYR ASP LEU PRO PRO SEQRES 14 A 281 TYR ASN SER ALA SER GLU GLY PHE ARG ASN HIS LEU GLU SEQRES 15 A 281 GLY TRP ARG GLY VAL ASN LEU HIS ASN ARG VAL HIS VAL SEQRES 16 A 281 TRP VAL GLY GLY GLN MET ALA THR GLY VAL SER PRO ASN SEQRES 17 A 281 ASP PRO VAL PHE TRP LEU HIS HIS ALA TYR VAL ASP LYS SEQRES 18 A 281 LEU TRP ALA GLU TRP GLN ARG ARG HIS PRO ASP SER ALA SEQRES 19 A 281 TYR VAL PRO THR GLY GLY THR PRO ASP VAL VAL ASP LEU SEQRES 20 A 281 ASN GLU THR MET LYS PRO TRP ASN THR VAL ARG PRO ALA SEQRES 21 A 281 ASP LEU LEU ASP HIS THR ALA TYR TYR THR PHE ASP ALA SEQRES 22 A 281 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 134 MET PRO GLU ILE THR ARG ARG ARG ALA LEU THR ALA ALA SEQRES 2 B 134 ALA ALA VAL ALA ALA THR ALA SER ALA ALA VAL THR LEU SEQRES 3 B 134 ALA ALA PRO ALA ALA SER ALA ALA GLY HIS HIS GLU PRO SEQRES 4 B 134 ALA ALA PRO GLU SER PHE ASP GLU VAL TYR LYS GLY ARG SEQRES 5 B 134 ARG ILE GLN GLY ARG PRO ALA ARG GLY ALA ALA HIS HIS SEQRES 6 B 134 HIS GLU HIS GLY GLY GLY TYR GLU VAL PHE VAL ASP GLY SEQRES 7 B 134 VAL GLN LEU HIS VAL MET ARG ASN ALA ASP GLY SER TRP SEQRES 8 B 134 ILE SER VAL VAL SER HIS TYR ASP PRO VAL PRO THR PRO SEQRES 9 B 134 ARG ALA ALA ALA ARG ALA ALA VAL ASP GLU LEU GLN GLY SEQRES 10 B 134 ALA PRO LEU LEU PRO PHE PRO ALA ASN LEU GLU HIS HIS SEQRES 11 B 134 HIS HIS HIS HIS HET CU A 400 1 HET CU A 401 1 HET NO3 A 405 4 HET NO3 A 406 4 HET NO3 A 408 4 HET CU A 403 1 HET PER A 404 2 HET NO3 B 407 4 HET CU B 402 2 HETNAM CU COPPER (II) ION HETNAM NO3 NITRATE ION HETNAM PER PEROXIDE ION FORMUL 3 CU 4(CU 2+) FORMUL 5 NO3 4(N O3 1-) FORMUL 9 PER O2 2- FORMUL 12 HOH *236(H2 O) HELIX 1 1 ASN A 6 LEU A 10 5 5 HELIX 2 2 THR A 11 SER A 28 1 18 HELIX 3 3 GLY A 29 ASP A 45 1 17 HELIX 4 4 SER A 58 SER A 76 1 19 HELIX 5 5 ALA A 96 ALA A 100 5 5 HELIX 6 6 ALA A 121 GLY A 125 5 5 HELIX 7 7 THR A 152 ILE A 162 1 11 HELIX 8 8 GLY A 176 GLY A 183 1 8 HELIX 9 9 LEU A 189 GLY A 198 1 10 HELIX 10 10 GLY A 199 THR A 203 5 5 HELIX 11 11 VAL A 205 ASP A 209 5 5 HELIX 12 12 PRO A 210 HIS A 230 1 21 HELIX 13 13 ARG A 258 LEU A 263 1 6 HELIX 14 14 ASP A 264 TYR A 268 5 5 HELIX 15 15 THR B 103 GLN B 116 1 14 SHEET 1 A 2 VAL A 3 ARG A 4 0 SHEET 2 A 2 THR A 270 PHE A 271 1 O THR A 270 N ARG A 4 SHEET 1 B 4 PHE B 45 TYR B 49 0 SHEET 2 B 4 ARG B 52 ARG B 57 -1 O ILE B 54 N GLU B 47 SHEET 3 B 4 GLU B 73 VAL B 76 -1 O GLU B 73 N ARG B 57 SHEET 4 B 4 VAL B 79 LEU B 81 -1 O VAL B 79 N VAL B 76 SHEET 1 C 3 VAL B 83 ARG B 85 0 SHEET 2 C 3 TRP B 91 SER B 93 -1 O ILE B 92 N MET B 84 SHEET 3 C 3 SER B 96 VAL B 101 -1 O VAL B 101 N TRP B 91 LINK NE2 HIS A 38 CU CU A 400 1555 1555 2.14 LINK NE2 HIS A 54 CU CU A 400 1555 1555 2.20 LINK NE2 HIS A 63 CU CU A 400 1555 1555 2.21 LINK NE2 HIS A 180 CU CU A 403 1555 1555 2.17 LINK NE2 HIS A 190 CU CU A 401 1555 1555 2.09 LINK NE2 HIS A 194 CU CU A 401 1555 1555 2.07 LINK NE2 HIS A 216 CU CU A 401 1555 1555 2.15 LINK CU CU A 400 O2 PER A 404 1555 1555 1.89 LINK CU CU A 400 O1 PER A 404 1555 1555 1.96 LINK CU CU A 401 O1 PER A 404 1555 1555 2.12 LINK CU CU A 401 O2 PER A 404 1555 1555 1.92 LINK NE2BHIS B 82 CU B CU B 402 1555 1555 2.44 LINK NE2AHIS B 82 CU A CU B 402 1555 1555 2.13 LINK SD MET B 84 CU B CU B 402 1555 1555 2.76 LINK NE2BHIS B 97 CU B CU B 402 1555 1555 2.48 LINK CU B CU B 402 O HOH B 644 1555 1555 2.27 CISPEP 1 PRO A 168 PRO A 169 0 0.32 CISPEP 2 VAL A 236 PRO A 237 0 0.34 CISPEP 3 LYS A 252 PRO A 253 0 0.32 SITE 1 AC1 5 HIS A 38 HIS A 54 HIS A 63 CU A 401 SITE 2 AC1 5 PER A 404 SITE 1 AC2 5 HIS A 190 HIS A 194 HIS A 216 CU A 400 SITE 2 AC2 5 PER A 404 SITE 1 AC3 8 ARG A 132 VAL A 133 ASP A 134 ARG A 140 SITE 2 AC3 8 GLN A 200 THR A 203 VAL A 205 HOH A 553 SITE 1 AC4 7 TYR A 165 TRP A 223 TRP A 226 GLN A 227 SITE 2 AC4 7 ALA A 234 TYR A 235 LEU A 263 SITE 1 AC5 8 GLY A 125 PRO A 128 HOH A 568 THR B 103 SITE 2 AC5 8 ARG B 105 ALA B 106 ARG B 109 HOH B 476 SITE 1 AC6 7 THR A 238 GLY A 239 ASP A 246 LEU A 247 SITE 2 AC6 7 ASN A 248 LYS B 50 HOH B 456 SITE 1 AC7 5 ILE A 42 HIS B 82 MET B 84 HIS B 97 SITE 2 AC7 5 HOH B 644 SITE 1 AC8 2 GLU A 175 HIS A 180 SITE 1 AC9 10 HIS A 38 HIS A 54 HIS A 63 HIS A 190 SITE 2 AC9 10 HIS A 194 PHE A 212 HIS A 216 CU A 400 SITE 3 AC9 10 CU A 401 TYR B 98 CRYST1 65.160 96.550 54.720 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015347 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010357 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018275 0.00000