HEADER OXIDOREDUCTASE 05-MAR-05 1WZI TITLE STRUCTURAL BASIS FOR ALTERATION OF COFACTOR SPECIFICITY OF MALATE TITLE 2 DEHYDROGENASE FROM THERMUS FLAVUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: MALATE DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.1.37; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 OTHER_DETAILS: MALATE DEHYDROGENASE MUTANT EX7 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 STRAIN: AT-62; SOURCE 5 GENE: MDH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: JM109; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PUC19 KEYWDS SEVEN AMINO ACID RESIDUES MUTANT, PROTEIN-NADPH COMPLEX, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR T.TOMITA,S.FUSHINOBU,T.KUZUYAMA,M.NISHIYAMA REVDAT 5 25-OCT-23 1WZI 1 REMARK REVDAT 4 10-NOV-21 1WZI 1 REMARK SEQADV REVDAT 3 29-NOV-17 1WZI 1 HELIX REVDAT 2 24-FEB-09 1WZI 1 VERSN REVDAT 1 14-MAR-06 1WZI 0 JRNL AUTH T.TOMITA,S.FUSHINOBU,T.KUZUYAMA,M.NISHIYAMA JRNL TITL STRUCTURAL BASIS FOR ALTERATION OF COFACTOR SPECIFICITY OF JRNL TITL 2 MALATE DEHYDROGENASE FROM THERMUS FLAVUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.A.KELLY,M.NISHIYAMA,Y.OHNISHI,T.BEPPU,J.J.BIRKTOFT REMARK 1 TITL DETERMINANTS OF PROTEIN THERMOSTABILITY OBSERVED IN THE 1.9 REMARK 1 TITL 2 ANGSTROMS CRYSTAL STRUCTURE OF MALATE DEHYDROGENASE FROM THE REMARK 1 TITL 3 THERMOPHILIC BACTERIUM THERMUS FLAVUS REMARK 1 REF BIOCHEMISTRY V. 32 3913 1993 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 8471603 REMARK 1 DOI 10.1021/BI00066A010 REMARK 1 REFERENCE 2 REMARK 1 AUTH C.A.KELLY,S.SARFATY,M.NISHIYAMA,T.BEPPU,J.J.BIRKTOFT REMARK 1 TITL PRELIMINARY X-RAY DIFFRACTION ANALYSIS OF A CRYSTALLIZABLE REMARK 1 TITL 2 MUTANT OF MALATE DEHYDROGENASE FROM THE THERMOPHILE THERMUS REMARK 1 TITL 3 FLAVUS REMARK 1 REF J.MOL.BIOL. V. 221 383 1991 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 1920425 REMARK 1 DOI 10.1016/0022-2836(91)80060-8 REMARK 1 REFERENCE 3 REMARK 1 AUTH J.J.BIRKTOFT,G.RHODES,L.J.BANASZAK REMARK 1 TITL REFINED CRYSTAL STRUCTURE OF CYTOPLASMIC MALATE REMARK 1 TITL 2 DEHYDROGENASE AT 2.5-A RESOLUTION REMARK 1 REF BIOCHEMISTRY V. 28 6065 1989 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 2775751 REMARK 1 DOI 10.1021/BI00440A051 REMARK 1 REFERENCE 4 REMARK 1 AUTH M.NISHIYAMA,N.MATSUBARA,K.YAMAMOTO,S.IIJIMA,T.UOZUMI,T.BEPPU REMARK 1 TITL NUCLEOTIDE SEQUENCE OF THE MALATE DEHYDROGENASE GENE OF REMARK 1 TITL 2 THERMUS FLAVUS AND ITS MUTATION DIRECTING AN INCREASE IN REMARK 1 TITL 3 ENZYME ACTIVITY REMARK 1 REF J.BIOL.CHEM. V. 261 14178 1986 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 3771528 REMARK 1 REFERENCE 5 REMARK 1 AUTH J.J.BIRKTOFT,L.J.BANASZAK REMARK 1 TITL THE PRESENCE OF A HISTIDINE-ASPARTIC ACID PAIR IN THE ACTIVE REMARK 1 TITL 2 SITE OF 2-HYDROXYACID DEHYDROGENASES. X-RAY REFINEMENT OF REMARK 1 TITL 3 CYTOPLASMIC MALATE DEHYDROGENASE REMARK 1 REF J.BIOL.CHEM. V. 258 472 1983 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 6848515 REMARK 1 REFERENCE 6 REMARK 1 AUTH L.J.BANASZAK,R.A.BRADSHAW REMARK 1 TITL MALATE DEHYDROGENASES REMARK 1 REF ENZYME V. 11 369 1975 REMARK 1 REFN ISSN 0013-9432 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2286096.970 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 48460 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2407 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.13 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 7615 REMARK 3 BIN R VALUE (WORKING SET) : 0.1930 REMARK 3 BIN FREE R VALUE : 0.2370 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 390 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.012 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4980 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 78 REMARK 3 SOLVENT ATOMS : 624 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 8.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.33000 REMARK 3 B22 (A**2) : 0.73000 REMARK 3 B33 (A**2) : -0.40000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.21 REMARK 3 ESD FROM SIGMAA (A) : 0.05 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.25 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.09 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.060 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.320 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.980 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.240 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.400 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 45.73 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : NADPHMODIFIED.PARAM REMARK 3 PARAMETER FILE 3 : WATER.PARAM REMARK 3 PARAMETER FILE 4 : CIS_PEPTIDE16.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WZI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-MAR-05. REMARK 100 THE DEPOSITION ID IS D_1000024189. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-OCT-03 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48624 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 28.890 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : 0.05000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.13 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CCP4 REMARK 200 STARTING MODEL: PDB ENTRY 1BMD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, DITHIOTHREITOL, PH 8.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.15500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.85000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.69500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.85000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.15500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.69500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE SECOND PART OF THE BIOLOGICAL ASSEMBLY IS GENERATED REMARK 300 BY THE TWO FOLD AXIS: -X+1, Y, -Z. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 90 -129.04 -65.07 REMARK 500 ARG A 91 60.34 -175.64 REMARK 500 LYS A 92 137.98 -32.44 REMARK 500 MET A 95 -121.04 -117.38 REMARK 500 GLU A 96 154.94 174.63 REMARK 500 LEU A 209 2.19 -64.57 REMARK 500 LEU A 258 -74.74 -90.40 REMARK 500 ASP B 58 3.27 -69.97 REMARK 500 LEU B 209 3.93 -69.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NDP A 1334 REMARK 610 NDP B 2334 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP A 1334 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP B 2334 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1BMD RELATED DB: PDB REMARK 900 THE NATIVE PROTEIN COMPLEXED WITH NADH REMARK 900 RELATED ID: 1Y7T RELATED DB: PDB REMARK 900 THE NATIVE PROTEIN COMPLEXED WITH NADPH REMARK 900 RELATED ID: 1WZE RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH NADH DBREF 1WZI A 0 332 UNP P10584 MDH_THETH 1 327 DBREF 1WZI B 0 332 UNP P10584 MDH_THETH 1 327 SEQADV 1WZI GLY A 41 UNP P10584 GLU 42 ENGINEERED MUTATION SEQADV 1WZI SER A 42 UNP P10584 ILE 43 ENGINEERED MUTATION SEQADV 1WZI GLU A 43 UNP P10584 PRO 44 ENGINEERED MUTATION SEQADV 1WZI ARG A 44 UNP P10584 GLN 45 ENGINEERED MUTATION SEQADV 1WZI SER A 45 UNP P10584 ALA 46 ENGINEERED MUTATION SEQADV 1WZI PHE A 46 UNP P10584 MET 47 ENGINEERED MUTATION SEQADV 1WZI GLN A 47 UNP P10584 LYS 48 ENGINEERED MUTATION SEQADV 1WZI GLY B 41 UNP P10584 GLU 42 ENGINEERED MUTATION SEQADV 1WZI SER B 42 UNP P10584 ILE 43 ENGINEERED MUTATION SEQADV 1WZI GLU B 43 UNP P10584 PRO 44 ENGINEERED MUTATION SEQADV 1WZI ARG B 44 UNP P10584 GLN 45 ENGINEERED MUTATION SEQADV 1WZI SER B 45 UNP P10584 ALA 46 ENGINEERED MUTATION SEQADV 1WZI PHE B 46 UNP P10584 MET 47 ENGINEERED MUTATION SEQADV 1WZI GLN B 47 UNP P10584 LYS 48 ENGINEERED MUTATION SEQRES 1 A 327 MET LYS ALA PRO VAL ARG VAL ALA VAL THR GLY ALA ALA SEQRES 2 A 327 GLY GLN ILE GLY TYR SER LEU LEU PHE ARG ILE ALA ALA SEQRES 3 A 327 GLY GLU MET LEU GLY LYS ASP GLN PRO VAL ILE LEU GLN SEQRES 4 A 327 LEU LEU GLY SER GLU ARG SER PHE GLN ALA LEU GLU GLY SEQRES 5 A 327 VAL VAL MET GLU LEU GLU ASP CYS ALA PHE PRO LEU LEU SEQRES 6 A 327 ALA GLY LEU GLU ALA THR ASP ASP PRO LYS VAL ALA PHE SEQRES 7 A 327 LYS ASP ALA ASP TYR ALA LEU LEU VAL GLY ALA ALA PRO SEQRES 8 A 327 ARG LYS ALA GLY MET GLU ARG ARG ASP LEU LEU GLN VAL SEQRES 9 A 327 ASN GLY LYS ILE PHE THR GLU GLN GLY ARG ALA LEU ALA SEQRES 10 A 327 GLU VAL ALA LYS LYS ASP VAL LYS VAL LEU VAL VAL GLY SEQRES 11 A 327 ASN PRO ALA ASN THR ASN ALA LEU ILE ALA TYR LYS ASN SEQRES 12 A 327 ALA PRO GLY LEU ASN PRO ARG ASN PHE THR ALA MET THR SEQRES 13 A 327 ARG LEU ASP HIS ASN ARG ALA LYS ALA GLN LEU ALA LYS SEQRES 14 A 327 LYS THR GLY THR GLY VAL ASP ARG ILE ARG ARG MET THR SEQRES 15 A 327 VAL TRP GLY ASN HIS SER SER THR MET PHE PRO ASP LEU SEQRES 16 A 327 PHE HIS ALA GLU VAL ASP GLY ARG PRO ALA LEU GLU LEU SEQRES 17 A 327 VAL ASP MET GLU TRP TYR GLU LYS VAL PHE ILE PRO THR SEQRES 18 A 327 VAL ALA GLN ARG GLY ALA ALA ILE ILE GLN ALA ARG GLY SEQRES 19 A 327 ALA SER SER ALA ALA SER ALA ALA ASN ALA ALA ILE GLU SEQRES 20 A 327 HIS ILE ARG ASP TRP ALA LEU GLY THR PRO GLU GLY ASP SEQRES 21 A 327 TRP VAL SER MET ALA VAL PRO SER GLN GLY GLU TYR GLY SEQRES 22 A 327 ILE PRO GLU GLY ILE VAL TYR SER PHE PRO VAL THR ALA SEQRES 23 A 327 LYS ASP GLY ALA TYR ARG VAL VAL GLU GLY LEU GLU ILE SEQRES 24 A 327 ASN GLU PHE ALA ARG LYS ARG MET GLU ILE THR ALA GLN SEQRES 25 A 327 GLU LEU LEU ASP GLU MET GLU GLN VAL LYS ALA LEU GLY SEQRES 26 A 327 LEU ILE SEQRES 1 B 327 MET LYS ALA PRO VAL ARG VAL ALA VAL THR GLY ALA ALA SEQRES 2 B 327 GLY GLN ILE GLY TYR SER LEU LEU PHE ARG ILE ALA ALA SEQRES 3 B 327 GLY GLU MET LEU GLY LYS ASP GLN PRO VAL ILE LEU GLN SEQRES 4 B 327 LEU LEU GLY SER GLU ARG SER PHE GLN ALA LEU GLU GLY SEQRES 5 B 327 VAL VAL MET GLU LEU GLU ASP CYS ALA PHE PRO LEU LEU SEQRES 6 B 327 ALA GLY LEU GLU ALA THR ASP ASP PRO LYS VAL ALA PHE SEQRES 7 B 327 LYS ASP ALA ASP TYR ALA LEU LEU VAL GLY ALA ALA PRO SEQRES 8 B 327 ARG LYS ALA GLY MET GLU ARG ARG ASP LEU LEU GLN VAL SEQRES 9 B 327 ASN GLY LYS ILE PHE THR GLU GLN GLY ARG ALA LEU ALA SEQRES 10 B 327 GLU VAL ALA LYS LYS ASP VAL LYS VAL LEU VAL VAL GLY SEQRES 11 B 327 ASN PRO ALA ASN THR ASN ALA LEU ILE ALA TYR LYS ASN SEQRES 12 B 327 ALA PRO GLY LEU ASN PRO ARG ASN PHE THR ALA MET THR SEQRES 13 B 327 ARG LEU ASP HIS ASN ARG ALA LYS ALA GLN LEU ALA LYS SEQRES 14 B 327 LYS THR GLY THR GLY VAL ASP ARG ILE ARG ARG MET THR SEQRES 15 B 327 VAL TRP GLY ASN HIS SER SER THR MET PHE PRO ASP LEU SEQRES 16 B 327 PHE HIS ALA GLU VAL ASP GLY ARG PRO ALA LEU GLU LEU SEQRES 17 B 327 VAL ASP MET GLU TRP TYR GLU LYS VAL PHE ILE PRO THR SEQRES 18 B 327 VAL ALA GLN ARG GLY ALA ALA ILE ILE GLN ALA ARG GLY SEQRES 19 B 327 ALA SER SER ALA ALA SER ALA ALA ASN ALA ALA ILE GLU SEQRES 20 B 327 HIS ILE ARG ASP TRP ALA LEU GLY THR PRO GLU GLY ASP SEQRES 21 B 327 TRP VAL SER MET ALA VAL PRO SER GLN GLY GLU TYR GLY SEQRES 22 B 327 ILE PRO GLU GLY ILE VAL TYR SER PHE PRO VAL THR ALA SEQRES 23 B 327 LYS ASP GLY ALA TYR ARG VAL VAL GLU GLY LEU GLU ILE SEQRES 24 B 327 ASN GLU PHE ALA ARG LYS ARG MET GLU ILE THR ALA GLN SEQRES 25 B 327 GLU LEU LEU ASP GLU MET GLU GLN VAL LYS ALA LEU GLY SEQRES 26 B 327 LEU ILE HET NDP A1334 39 HET NDP B2334 39 HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE FORMUL 3 NDP 2(C21 H30 N7 O17 P3) FORMUL 5 HOH *624(H2 O) HELIX 1 1 GLY A 13 ALA A 25 1 13 HELIX 2 2 SER A 45 ASP A 58 1 14 HELIX 3 3 ASP A 72 PHE A 77 1 6 HELIX 4 4 GLU A 96 ALA A 119 1 24 HELIX 5 5 PRO A 131 ASN A 142 1 12 HELIX 6 6 ASN A 147 ARG A 149 5 3 HELIX 7 7 THR A 155 GLY A 171 1 17 HELIX 8 8 GLY A 173 ASP A 175 5 3 HELIX 9 9 LEU A 209 LEU A 211 5 3 HELIX 10 10 ASP A 214 VAL A 221 1 8 HELIX 11 11 VAL A 221 GLY A 238 1 18 HELIX 12 12 SER A 241 LEU A 258 1 18 HELIX 13 13 GLY A 274 ILE A 279 5 5 HELIX 14 14 ASN A 305 LEU A 329 1 25 HELIX 15 15 GLY B 13 ALA B 25 1 13 HELIX 16 16 SER B 45 ASP B 58 1 14 HELIX 17 17 ASP B 72 PHE B 77 1 6 HELIX 18 18 GLU B 96 ALA B 119 1 24 HELIX 19 19 PRO B 131 ASN B 142 1 12 HELIX 20 20 ASN B 147 ARG B 149 5 3 HELIX 21 21 THR B 155 GLY B 171 1 17 HELIX 22 22 GLY B 173 ASP B 175 5 3 HELIX 23 23 LEU B 209 LEU B 211 5 3 HELIX 24 24 ASP B 214 VAL B 221 1 8 HELIX 25 25 VAL B 221 GLY B 238 1 18 HELIX 26 26 SER B 241 GLY B 259 1 19 HELIX 27 27 GLY B 274 ILE B 279 5 5 HELIX 28 28 ASN B 305 LEU B 329 1 25 SHEET 1 A 6 LEU A 64 THR A 70 0 SHEET 2 A 6 VAL A 35 LEU A 40 1 N LEU A 39 O GLU A 68 SHEET 3 A 6 VAL A 4 VAL A 8 1 N VAL A 6 O ILE A 36 SHEET 4 A 6 TYR A 82 LEU A 85 1 O TYR A 82 N ALA A 7 SHEET 5 A 6 LYS A 124 VAL A 127 1 O LEU A 126 N LEU A 85 SHEET 6 A 6 PHE A 151 ALA A 153 1 O THR A 152 N VAL A 127 SHEET 1 B 3 ILE A 177 ARG A 178 0 SHEET 2 B 3 GLU A 198 VAL A 199 -1 O GLU A 198 N ARG A 178 SHEET 3 B 3 ARG A 206 PRO A 207 -1 O ARG A 206 N VAL A 199 SHEET 1 C 2 THR A 181 TRP A 183 0 SHEET 2 C 2 PHE A 191 ASP A 193 -1 O ASP A 193 N THR A 181 SHEET 1 D 3 VAL A 266 PRO A 271 0 SHEET 2 D 3 VAL A 284 LYS A 292 -1 O VAL A 289 N VAL A 266 SHEET 3 D 3 ALA A 295 VAL A 298 -1 O ALA A 295 N LYS A 292 SHEET 1 E 6 LEU B 64 THR B 70 0 SHEET 2 E 6 VAL B 35 LEU B 40 1 N LEU B 39 O GLU B 68 SHEET 3 E 6 VAL B 4 THR B 9 1 N VAL B 6 O ILE B 36 SHEET 4 E 6 TYR B 82 LEU B 85 1 O TYR B 82 N ALA B 7 SHEET 5 E 6 LYS B 124 VAL B 127 1 O LEU B 126 N LEU B 85 SHEET 6 E 6 PHE B 151 ALA B 153 1 O THR B 152 N VAL B 127 SHEET 1 F 3 ILE B 177 ARG B 178 0 SHEET 2 F 3 GLU B 198 VAL B 199 -1 O GLU B 198 N ARG B 178 SHEET 3 F 3 ARG B 206 PRO B 207 -1 O ARG B 206 N VAL B 199 SHEET 1 G 2 THR B 181 TRP B 183 0 SHEET 2 G 2 PHE B 191 ASP B 193 -1 O ASP B 193 N THR B 181 SHEET 1 H 3 VAL B 266 PRO B 271 0 SHEET 2 H 3 VAL B 284 LYS B 292 -1 O VAL B 289 N VAL B 266 SHEET 3 H 3 ALA B 295 VAL B 298 -1 O ALA B 295 N LYS B 292 CISPEP 1 ASN A 130 PRO A 131 0 -0.31 CISPEP 2 ASN B 130 PRO B 131 0 -0.21 SITE 1 AC1 21 GLY A 13 GLN A 14 ILE A 15 GLY A 41 SITE 2 AC1 21 SER A 42 SER A 45 GLY A 87 ALA A 88 SITE 3 AC1 21 VAL A 128 GLY A 129 ASN A 130 MET A 154 SITE 4 AC1 21 LEU A 157 HIS A 186 SER A 240 HOH A1336 SITE 5 AC1 21 HOH A1343 HOH A1412 HOH A1434 HOH A1442 SITE 6 AC1 21 HOH A1467 SITE 1 AC2 20 GLY B 10 ALA B 11 ALA B 12 GLY B 13 SITE 2 AC2 20 GLN B 14 ILE B 15 LEU B 40 GLY B 41 SITE 3 AC2 20 SER B 42 SER B 45 ALA B 88 VAL B 128 SITE 4 AC2 20 GLY B 129 ASN B 130 MET B 154 HIS B 186 SITE 5 AC2 20 SER B 240 HOH B2348 HOH B2358 HOH B2630 CRYST1 70.310 85.390 117.700 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014223 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011711 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008496 0.00000