data_1X03 # _entry.id 1X03 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1X03 RCSB RCSB024210 WWPDB D_1000024210 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1X04 _pdbx_database_related.details 'endophilin BAR domain (appendage-less mutant)' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1X03 _pdbx_database_status.recvd_initial_deposition_date 2005-03-14 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Masuda, M.' 1 'Takeda, S.' 2 'Sone, M.' 3 'Kamioka, Y.' 4 'Mori, H.' 5 'Mochizuki, N.' 6 # _citation.id primary _citation.title 'Endophilin BAR domain drives membrane curvature by two newly identified structure-based mechanisms' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 25 _citation.page_first 2889 _citation.page_last 2897 _citation.year 2006 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16763557 _citation.pdbx_database_id_DOI 10.1038/sj.emboj.7601176 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Masuda, M.' 1 primary 'Takeda, S.' 2 primary 'Sone, M.' 3 primary 'Ohki, T.' 4 primary 'Mori, H.' 5 primary 'Kamioka, Y.' 6 primary 'Mochizuki, N.' 7 # _cell.entry_id 1X03 _cell.length_a 127.424 _cell.length_b 127.424 _cell.length_c 99.635 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1X03 _symmetry.space_group_name_H-M 'I 41' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'SH3-containing GRB2-like protein 2' _entity.formula_weight 29125.752 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 2.3.1.- _entity.pdbx_mutation ? _entity.pdbx_fragment 'endophilin BAR domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'endophilin A1, SH3 domain protein 2A, Endophilin 1, EEN-B1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GPLGS(MSE)SVAGLKKQFHKATQKVSEKVGGAEGTKLDDDFKE(MSE)ERKVDVTSRAV(MSE)EI(MSE)TKTIEYLQ PNPASRAKLS(MSE)INT(MSE)SKIRGQEKGPGYPQAEALLAEA(MSE)LKFGRELGDDCNFGPALGEVGEA(MSE)RE LSEVKDSLDIEVKQNFIDPLQNLHDKDLREIQHHLKKLEGRRLDFDYKKKRQGKIPDEELRQALEKFDESKEIAESS (MSE)FNLLE(MSE)DIEQVSQLSALVQAQLEYHKQAVQILQQVTVRLEERIRQA ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSMSVAGLKKQFHKATQKVSEKVGGAEGTKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLSMINTMS KIRGQEKGPGYPQAEALLAEAMLKFGRELGDDCNFGPALGEVGEAMRELSEVKDSLDIEVKQNFIDPLQNLHDKDLREIQ HHLKKLEGRRLDFDYKKKRQGKIPDEELRQALEKFDESKEIAESSMFNLLEMDIEQVSQLSALVQAQLEYHKQAVQILQQ VTVRLEERIRQA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 MSE n 1 7 SER n 1 8 VAL n 1 9 ALA n 1 10 GLY n 1 11 LEU n 1 12 LYS n 1 13 LYS n 1 14 GLN n 1 15 PHE n 1 16 HIS n 1 17 LYS n 1 18 ALA n 1 19 THR n 1 20 GLN n 1 21 LYS n 1 22 VAL n 1 23 SER n 1 24 GLU n 1 25 LYS n 1 26 VAL n 1 27 GLY n 1 28 GLY n 1 29 ALA n 1 30 GLU n 1 31 GLY n 1 32 THR n 1 33 LYS n 1 34 LEU n 1 35 ASP n 1 36 ASP n 1 37 ASP n 1 38 PHE n 1 39 LYS n 1 40 GLU n 1 41 MSE n 1 42 GLU n 1 43 ARG n 1 44 LYS n 1 45 VAL n 1 46 ASP n 1 47 VAL n 1 48 THR n 1 49 SER n 1 50 ARG n 1 51 ALA n 1 52 VAL n 1 53 MSE n 1 54 GLU n 1 55 ILE n 1 56 MSE n 1 57 THR n 1 58 LYS n 1 59 THR n 1 60 ILE n 1 61 GLU n 1 62 TYR n 1 63 LEU n 1 64 GLN n 1 65 PRO n 1 66 ASN n 1 67 PRO n 1 68 ALA n 1 69 SER n 1 70 ARG n 1 71 ALA n 1 72 LYS n 1 73 LEU n 1 74 SER n 1 75 MSE n 1 76 ILE n 1 77 ASN n 1 78 THR n 1 79 MSE n 1 80 SER n 1 81 LYS n 1 82 ILE n 1 83 ARG n 1 84 GLY n 1 85 GLN n 1 86 GLU n 1 87 LYS n 1 88 GLY n 1 89 PRO n 1 90 GLY n 1 91 TYR n 1 92 PRO n 1 93 GLN n 1 94 ALA n 1 95 GLU n 1 96 ALA n 1 97 LEU n 1 98 LEU n 1 99 ALA n 1 100 GLU n 1 101 ALA n 1 102 MSE n 1 103 LEU n 1 104 LYS n 1 105 PHE n 1 106 GLY n 1 107 ARG n 1 108 GLU n 1 109 LEU n 1 110 GLY n 1 111 ASP n 1 112 ASP n 1 113 CYS n 1 114 ASN n 1 115 PHE n 1 116 GLY n 1 117 PRO n 1 118 ALA n 1 119 LEU n 1 120 GLY n 1 121 GLU n 1 122 VAL n 1 123 GLY n 1 124 GLU n 1 125 ALA n 1 126 MSE n 1 127 ARG n 1 128 GLU n 1 129 LEU n 1 130 SER n 1 131 GLU n 1 132 VAL n 1 133 LYS n 1 134 ASP n 1 135 SER n 1 136 LEU n 1 137 ASP n 1 138 ILE n 1 139 GLU n 1 140 VAL n 1 141 LYS n 1 142 GLN n 1 143 ASN n 1 144 PHE n 1 145 ILE n 1 146 ASP n 1 147 PRO n 1 148 LEU n 1 149 GLN n 1 150 ASN n 1 151 LEU n 1 152 HIS n 1 153 ASP n 1 154 LYS n 1 155 ASP n 1 156 LEU n 1 157 ARG n 1 158 GLU n 1 159 ILE n 1 160 GLN n 1 161 HIS n 1 162 HIS n 1 163 LEU n 1 164 LYS n 1 165 LYS n 1 166 LEU n 1 167 GLU n 1 168 GLY n 1 169 ARG n 1 170 ARG n 1 171 LEU n 1 172 ASP n 1 173 PHE n 1 174 ASP n 1 175 TYR n 1 176 LYS n 1 177 LYS n 1 178 LYS n 1 179 ARG n 1 180 GLN n 1 181 GLY n 1 182 LYS n 1 183 ILE n 1 184 PRO n 1 185 ASP n 1 186 GLU n 1 187 GLU n 1 188 LEU n 1 189 ARG n 1 190 GLN n 1 191 ALA n 1 192 LEU n 1 193 GLU n 1 194 LYS n 1 195 PHE n 1 196 ASP n 1 197 GLU n 1 198 SER n 1 199 LYS n 1 200 GLU n 1 201 ILE n 1 202 ALA n 1 203 GLU n 1 204 SER n 1 205 SER n 1 206 MSE n 1 207 PHE n 1 208 ASN n 1 209 LEU n 1 210 LEU n 1 211 GLU n 1 212 MSE n 1 213 ASP n 1 214 ILE n 1 215 GLU n 1 216 GLN n 1 217 VAL n 1 218 SER n 1 219 GLN n 1 220 LEU n 1 221 SER n 1 222 ALA n 1 223 LEU n 1 224 VAL n 1 225 GLN n 1 226 ALA n 1 227 GLN n 1 228 LEU n 1 229 GLU n 1 230 TYR n 1 231 HIS n 1 232 LYS n 1 233 GLN n 1 234 ALA n 1 235 VAL n 1 236 GLN n 1 237 ILE n 1 238 LEU n 1 239 GLN n 1 240 GLN n 1 241 VAL n 1 242 THR n 1 243 VAL n 1 244 ARG n 1 245 LEU n 1 246 GLU n 1 247 GLU n 1 248 ARG n 1 249 ILE n 1 250 ARG n 1 251 GLN n 1 252 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'B834(DE3)pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX6p3 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SH3G2_HUMAN _struct_ref.pdbx_db_accession Q99962 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSVAGLKKQFHKATQKVSEKVGGAEGTKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLSMINTMSKIRGQ EKGPGYPQAEALLAEAMLKFGRELGDDCNFGPALGEVGEAMRELSEVKDSLDIEVKQNFIDPLQNLHDKDLREIQHHLKK LEGRRLDFDYKKKRQGKIPDEELRQALEKFDESKEIAESSMFNLLEMDIEQVSQLSALVQAQLEYHKQAVQILQQVTVRL EERIRQA ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1X03 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 252 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q99962 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 247 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 247 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1X03 GLY A 1 ? UNP Q99962 ? ? LINKER -4 1 1 1X03 PRO A 2 ? UNP Q99962 ? ? LINKER -3 2 1 1X03 LEU A 3 ? UNP Q99962 ? ? LINKER -2 3 1 1X03 GLY A 4 ? UNP Q99962 ? ? LINKER -1 4 1 1X03 SER A 5 ? UNP Q99962 ? ? LINKER 0 5 1 1X03 MSE A 6 ? UNP Q99962 MET 1 'MODIFIED RESIDUE' 1 6 1 1X03 MSE A 41 ? UNP Q99962 MET 36 'MODIFIED RESIDUE' 36 7 1 1X03 MSE A 53 ? UNP Q99962 MET 48 'MODIFIED RESIDUE' 48 8 1 1X03 MSE A 56 ? UNP Q99962 MET 51 'MODIFIED RESIDUE' 51 9 1 1X03 MSE A 75 ? UNP Q99962 MET 70 'MODIFIED RESIDUE' 70 10 1 1X03 MSE A 79 ? UNP Q99962 MET 74 'MODIFIED RESIDUE' 74 11 1 1X03 MSE A 102 ? UNP Q99962 MET 97 'MODIFIED RESIDUE' 97 12 1 1X03 MSE A 126 ? UNP Q99962 MET 121 'MODIFIED RESIDUE' 121 13 1 1X03 MSE A 206 ? UNP Q99962 MET 201 'MODIFIED RESIDUE' 201 14 1 1X03 MSE A 212 ? UNP Q99962 MET 207 'MODIFIED RESIDUE' 207 15 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1X03 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method MICRODIALYSIS _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.4 _exptl_crystal_grow.pdbx_details 'NaCl, ethylene glycol, glycerol, benzamizine/HCl, Hepes, DTT, pH 7.4, MICRODIALYSIS, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 90 ? 1 2 90 ? 1 1,2 ? ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 CCD 'RIGAKU JUPITER' 2004-07-04 ? 2 CCD 'ADSC QUANTUM 210' 2004-06-27 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M Diamond 'SINGLE WAVELENGTH' x-ray 2 1 M 'Si 111' MAD x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9797 1.0 2 0.9793 1.0 3 0.9794 1.0 4 0.9817 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'SPRING-8 BEAMLINE BL45PX' SPring-8 BL45PX ? 0.9797 2 SYNCHROTRON 'SPRING-8 BEAMLINE BL44B2' SPring-8 BL44B2 ? '0.9793, 0.9794, 0.9817, 0.9817' # _reflns.entry_id 1X03 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 3.1 _reflns.d_resolution_low 50 _reflns.number_all 14522 _reflns.number_obs 14464 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.066 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 22.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1,2 # _reflns_shell.d_res_high 3.1 _reflns_shell.d_res_low 3.21 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.363 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.5 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1433 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1,2 # _refine.entry_id 1X03 _refine.ls_d_res_high 3.1 _refine.ls_d_res_low 50 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I 0 _refine.ls_number_reflns_all 14529 _refine.ls_number_reflns_obs 14449 _refine.ls_number_reflns_R_free 738 _refine.ls_percent_reflns_obs 99.4 _refine.ls_R_factor_all 0.238 _refine.ls_R_factor_obs 0.238 _refine.ls_R_factor_R_work 0.236 _refine.ls_R_factor_R_free 0.264 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean 84.8 _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1X03 _refine_analyze.Luzzati_coordinate_error_obs 0.43 _refine_analyze.Luzzati_sigma_a_obs 0.66 _refine_analyze.Luzzati_d_res_low_obs 5.0 _refine_analyze.Luzzati_coordinate_error_free 0.48 _refine_analyze.Luzzati_sigma_a_free 0.65 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1698 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1698 _refine_hist.d_res_high 3.1 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005675 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.02969 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 3.1 _refine_ls_shell.d_res_low 3.21 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.423 _refine_ls_shell.percent_reflns_obs 98.7 _refine_ls_shell.R_factor_R_free 0.366 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 73 _refine_ls_shell.number_reflns_obs 1406 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 1X03 _struct.title 'Crystal structure of endophilin BAR domain' _struct.pdbx_descriptor 'SH3-containing GRB2-like protein 2 (E.C.2.3.1.-)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1X03 _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'BAR domain, TRANSFERASE' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details 'The biological assembly is a dimer generated by the two fold axis.' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 35 ? GLN A 64 ? ASP A 30 GLN A 59 1 ? 30 HELX_P HELX_P2 2 SER A 69 ? SER A 74 ? SER A 64 SER A 69 1 ? 6 HELX_P HELX_P3 3 GLN A 93 ? GLY A 110 ? GLN A 88 GLY A 105 1 ? 18 HELX_P HELX_P4 4 ASN A 114 ? PHE A 144 ? ASN A 109 PHE A 139 1 ? 31 HELX_P HELX_P5 5 PHE A 144 ? LYS A 154 ? PHE A 139 LYS A 149 1 ? 11 HELX_P HELX_P6 6 LYS A 154 ? ARG A 179 ? LYS A 149 ARG A 174 1 ? 26 HELX_P HELX_P7 7 PRO A 184 ? MSE A 212 ? PRO A 179 MSE A 207 1 ? 29 HELX_P HELX_P8 8 ASP A 213 ? ARG A 250 ? ASP A 208 ARG A 245 1 ? 38 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A GLU 40 C ? ? ? 1_555 A MSE 41 N ? ? A GLU 35 A MSE 36 1_555 ? ? ? ? ? ? ? 1.331 ? covale2 covale ? ? A MSE 41 C ? ? ? 1_555 A GLU 42 N ? ? A MSE 36 A GLU 37 1_555 ? ? ? ? ? ? ? 1.327 ? covale3 covale ? ? A VAL 52 C ? ? ? 1_555 A MSE 53 N ? ? A VAL 47 A MSE 48 1_555 ? ? ? ? ? ? ? 1.328 ? covale4 covale ? ? A MSE 53 C ? ? ? 1_555 A GLU 54 N ? ? A MSE 48 A GLU 49 1_555 ? ? ? ? ? ? ? 1.333 ? covale5 covale ? ? A ILE 55 C ? ? ? 1_555 A MSE 56 N ? ? A ILE 50 A MSE 51 1_555 ? ? ? ? ? ? ? 1.329 ? covale6 covale ? ? A MSE 56 C ? ? ? 1_555 A THR 57 N ? ? A MSE 51 A THR 52 1_555 ? ? ? ? ? ? ? 1.328 ? covale7 covale ? ? A SER 74 C ? ? ? 1_555 A MSE 75 N ? ? A SER 69 A MSE 70 1_555 ? ? ? ? ? ? ? 1.334 ? covale8 covale ? ? A MSE 75 C ? ? ? 1_555 A ILE 76 N ? ? A MSE 70 A ILE 71 1_555 ? ? ? ? ? ? ? 1.330 ? covale9 covale ? ? A ALA 101 C ? ? ? 1_555 A MSE 102 N ? ? A ALA 96 A MSE 97 1_555 ? ? ? ? ? ? ? 1.327 ? covale10 covale ? ? A MSE 102 C ? ? ? 1_555 A LEU 103 N ? ? A MSE 97 A LEU 98 1_555 ? ? ? ? ? ? ? 1.327 ? covale11 covale ? ? A ALA 125 C ? ? ? 1_555 A MSE 126 N ? ? A ALA 120 A MSE 121 1_555 ? ? ? ? ? ? ? 1.331 ? covale12 covale ? ? A MSE 126 C ? ? ? 1_555 A ARG 127 N ? ? A MSE 121 A ARG 122 1_555 ? ? ? ? ? ? ? 1.329 ? covale13 covale ? ? A SER 205 C ? ? ? 1_555 A MSE 206 N ? ? A SER 200 A MSE 201 1_555 ? ? ? ? ? ? ? 1.331 ? covale14 covale ? ? A MSE 206 C ? ? ? 1_555 A PHE 207 N ? ? A MSE 201 A PHE 202 1_555 ? ? ? ? ? ? ? 1.327 ? covale15 covale ? ? A GLU 211 C ? ? ? 1_555 A MSE 212 N ? ? A GLU 206 A MSE 207 1_555 ? ? ? ? ? ? ? 1.329 ? covale16 covale ? ? A MSE 212 C ? ? ? 1_555 A ASP 213 N ? ? A MSE 207 A ASP 208 1_555 ? ? ? ? ? ? ? 1.329 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1X03 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1X03 _atom_sites.fract_transf_matrix[1][1] 0.007848 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007848 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010037 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -4 ? ? ? A . n A 1 2 PRO 2 -3 ? ? ? A . n A 1 3 LEU 3 -2 ? ? ? A . n A 1 4 GLY 4 -1 ? ? ? A . n A 1 5 SER 5 0 ? ? ? A . n A 1 6 MSE 6 1 ? ? ? A . n A 1 7 SER 7 2 ? ? ? A . n A 1 8 VAL 8 3 ? ? ? A . n A 1 9 ALA 9 4 ? ? ? A . n A 1 10 GLY 10 5 ? ? ? A . n A 1 11 LEU 11 6 ? ? ? A . n A 1 12 LYS 12 7 ? ? ? A . n A 1 13 LYS 13 8 ? ? ? A . n A 1 14 GLN 14 9 ? ? ? A . n A 1 15 PHE 15 10 ? ? ? A . n A 1 16 HIS 16 11 ? ? ? A . n A 1 17 LYS 17 12 ? ? ? A . n A 1 18 ALA 18 13 ? ? ? A . n A 1 19 THR 19 14 ? ? ? A . n A 1 20 GLN 20 15 ? ? ? A . n A 1 21 LYS 21 16 ? ? ? A . n A 1 22 VAL 22 17 ? ? ? A . n A 1 23 SER 23 18 ? ? ? A . n A 1 24 GLU 24 19 ? ? ? A . n A 1 25 LYS 25 20 ? ? ? A . n A 1 26 VAL 26 21 ? ? ? A . n A 1 27 GLY 27 22 ? ? ? A . n A 1 28 GLY 28 23 ? ? ? A . n A 1 29 ALA 29 24 ? ? ? A . n A 1 30 GLU 30 25 ? ? ? A . n A 1 31 GLY 31 26 26 GLY GLY A . n A 1 32 THR 32 27 27 THR THR A . n A 1 33 LYS 33 28 28 LYS LYS A . n A 1 34 LEU 34 29 29 LEU LEU A . n A 1 35 ASP 35 30 30 ASP ASP A . n A 1 36 ASP 36 31 31 ASP ASP A . n A 1 37 ASP 37 32 32 ASP ASP A . n A 1 38 PHE 38 33 33 PHE PHE A . n A 1 39 LYS 39 34 34 LYS LYS A . n A 1 40 GLU 40 35 35 GLU GLU A . n A 1 41 MSE 41 36 36 MSE MSE A . n A 1 42 GLU 42 37 37 GLU GLU A . n A 1 43 ARG 43 38 38 ARG ARG A . n A 1 44 LYS 44 39 39 LYS LYS A . n A 1 45 VAL 45 40 40 VAL VAL A . n A 1 46 ASP 46 41 41 ASP ASP A . n A 1 47 VAL 47 42 42 VAL VAL A . n A 1 48 THR 48 43 43 THR THR A . n A 1 49 SER 49 44 44 SER SER A . n A 1 50 ARG 50 45 45 ARG ARG A . n A 1 51 ALA 51 46 46 ALA ALA A . n A 1 52 VAL 52 47 47 VAL VAL A . n A 1 53 MSE 53 48 48 MSE MSE A . n A 1 54 GLU 54 49 49 GLU GLU A . n A 1 55 ILE 55 50 50 ILE ILE A . n A 1 56 MSE 56 51 51 MSE MSE A . n A 1 57 THR 57 52 52 THR THR A . n A 1 58 LYS 58 53 53 LYS LYS A . n A 1 59 THR 59 54 54 THR THR A . n A 1 60 ILE 60 55 55 ILE ILE A . n A 1 61 GLU 61 56 56 GLU GLU A . n A 1 62 TYR 62 57 57 TYR TYR A . n A 1 63 LEU 63 58 58 LEU LEU A . n A 1 64 GLN 64 59 59 GLN GLN A . n A 1 65 PRO 65 60 60 PRO PRO A . n A 1 66 ASN 66 61 61 ASN ASN A . n A 1 67 PRO 67 62 62 PRO PRO A . n A 1 68 ALA 68 63 63 ALA ALA A . n A 1 69 SER 69 64 64 SER SER A . n A 1 70 ARG 70 65 65 ARG ARG A . n A 1 71 ALA 71 66 66 ALA ALA A . n A 1 72 LYS 72 67 67 LYS LYS A . n A 1 73 LEU 73 68 68 LEU LEU A . n A 1 74 SER 74 69 69 SER SER A . n A 1 75 MSE 75 70 70 MSE MSE A . n A 1 76 ILE 76 71 71 ILE ILE A . n A 1 77 ASN 77 72 ? ? ? A . n A 1 78 THR 78 73 ? ? ? A . n A 1 79 MSE 79 74 ? ? ? A . n A 1 80 SER 80 75 ? ? ? A . n A 1 81 LYS 81 76 ? ? ? A . n A 1 82 ILE 82 77 ? ? ? A . n A 1 83 ARG 83 78 ? ? ? A . n A 1 84 GLY 84 79 ? ? ? A . n A 1 85 GLN 85 80 ? ? ? A . n A 1 86 GLU 86 81 ? ? ? A . n A 1 87 LYS 87 82 ? ? ? A . n A 1 88 GLY 88 83 ? ? ? A . n A 1 89 PRO 89 84 84 PRO PRO A . n A 1 90 GLY 90 85 85 GLY GLY A . n A 1 91 TYR 91 86 86 TYR TYR A . n A 1 92 PRO 92 87 87 PRO PRO A . n A 1 93 GLN 93 88 88 GLN GLN A . n A 1 94 ALA 94 89 89 ALA ALA A . n A 1 95 GLU 95 90 90 GLU GLU A . n A 1 96 ALA 96 91 91 ALA ALA A . n A 1 97 LEU 97 92 92 LEU LEU A . n A 1 98 LEU 98 93 93 LEU LEU A . n A 1 99 ALA 99 94 94 ALA ALA A . n A 1 100 GLU 100 95 95 GLU GLU A . n A 1 101 ALA 101 96 96 ALA ALA A . n A 1 102 MSE 102 97 97 MSE MSE A . n A 1 103 LEU 103 98 98 LEU LEU A . n A 1 104 LYS 104 99 99 LYS LYS A . n A 1 105 PHE 105 100 100 PHE PHE A . n A 1 106 GLY 106 101 101 GLY GLY A . n A 1 107 ARG 107 102 102 ARG ARG A . n A 1 108 GLU 108 103 103 GLU GLU A . n A 1 109 LEU 109 104 104 LEU LEU A . n A 1 110 GLY 110 105 105 GLY GLY A . n A 1 111 ASP 111 106 106 ASP ASP A . n A 1 112 ASP 112 107 107 ASP ASP A . n A 1 113 CYS 113 108 108 CYS CYS A . n A 1 114 ASN 114 109 109 ASN ASN A . n A 1 115 PHE 115 110 110 PHE PHE A . n A 1 116 GLY 116 111 111 GLY GLY A . n A 1 117 PRO 117 112 112 PRO PRO A . n A 1 118 ALA 118 113 113 ALA ALA A . n A 1 119 LEU 119 114 114 LEU LEU A . n A 1 120 GLY 120 115 115 GLY GLY A . n A 1 121 GLU 121 116 116 GLU GLU A . n A 1 122 VAL 122 117 117 VAL VAL A . n A 1 123 GLY 123 118 118 GLY GLY A . n A 1 124 GLU 124 119 119 GLU GLU A . n A 1 125 ALA 125 120 120 ALA ALA A . n A 1 126 MSE 126 121 121 MSE MSE A . n A 1 127 ARG 127 122 122 ARG ARG A . n A 1 128 GLU 128 123 123 GLU GLU A . n A 1 129 LEU 129 124 124 LEU LEU A . n A 1 130 SER 130 125 125 SER SER A . n A 1 131 GLU 131 126 126 GLU GLU A . n A 1 132 VAL 132 127 127 VAL VAL A . n A 1 133 LYS 133 128 128 LYS LYS A . n A 1 134 ASP 134 129 129 ASP ASP A . n A 1 135 SER 135 130 130 SER SER A . n A 1 136 LEU 136 131 131 LEU LEU A . n A 1 137 ASP 137 132 132 ASP ASP A . n A 1 138 ILE 138 133 133 ILE ILE A . n A 1 139 GLU 139 134 134 GLU GLU A . n A 1 140 VAL 140 135 135 VAL VAL A . n A 1 141 LYS 141 136 136 LYS LYS A . n A 1 142 GLN 142 137 137 GLN GLN A . n A 1 143 ASN 143 138 138 ASN ASN A . n A 1 144 PHE 144 139 139 PHE PHE A . n A 1 145 ILE 145 140 140 ILE ILE A . n A 1 146 ASP 146 141 141 ASP ASP A . n A 1 147 PRO 147 142 142 PRO PRO A . n A 1 148 LEU 148 143 143 LEU LEU A . n A 1 149 GLN 149 144 144 GLN GLN A . n A 1 150 ASN 150 145 145 ASN ASN A . n A 1 151 LEU 151 146 146 LEU LEU A . n A 1 152 HIS 152 147 147 HIS HIS A . n A 1 153 ASP 153 148 148 ASP ASP A . n A 1 154 LYS 154 149 149 LYS LYS A . n A 1 155 ASP 155 150 150 ASP ASP A . n A 1 156 LEU 156 151 151 LEU LEU A . n A 1 157 ARG 157 152 152 ARG ARG A . n A 1 158 GLU 158 153 153 GLU GLU A . n A 1 159 ILE 159 154 154 ILE ILE A . n A 1 160 GLN 160 155 155 GLN GLN A . n A 1 161 HIS 161 156 156 HIS HIS A . n A 1 162 HIS 162 157 157 HIS HIS A . n A 1 163 LEU 163 158 158 LEU LEU A . n A 1 164 LYS 164 159 159 LYS LYS A . n A 1 165 LYS 165 160 160 LYS LYS A . n A 1 166 LEU 166 161 161 LEU LEU A . n A 1 167 GLU 167 162 162 GLU GLU A . n A 1 168 GLY 168 163 163 GLY GLY A . n A 1 169 ARG 169 164 164 ARG ARG A . n A 1 170 ARG 170 165 165 ARG ARG A . n A 1 171 LEU 171 166 166 LEU LEU A . n A 1 172 ASP 172 167 167 ASP ASP A . n A 1 173 PHE 173 168 168 PHE PHE A . n A 1 174 ASP 174 169 169 ASP ASP A . n A 1 175 TYR 175 170 170 TYR TYR A . n A 1 176 LYS 176 171 171 LYS LYS A . n A 1 177 LYS 177 172 172 LYS LYS A . n A 1 178 LYS 178 173 173 LYS LYS A . n A 1 179 ARG 179 174 174 ARG ARG A . n A 1 180 GLN 180 175 175 GLN GLN A . n A 1 181 GLY 181 176 176 GLY GLY A . n A 1 182 LYS 182 177 177 LYS LYS A . n A 1 183 ILE 183 178 178 ILE ILE A . n A 1 184 PRO 184 179 179 PRO PRO A . n A 1 185 ASP 185 180 180 ASP ASP A . n A 1 186 GLU 186 181 181 GLU GLU A . n A 1 187 GLU 187 182 182 GLU GLU A . n A 1 188 LEU 188 183 183 LEU LEU A . n A 1 189 ARG 189 184 184 ARG ARG A . n A 1 190 GLN 190 185 185 GLN GLN A . n A 1 191 ALA 191 186 186 ALA ALA A . n A 1 192 LEU 192 187 187 LEU LEU A . n A 1 193 GLU 193 188 188 GLU GLU A . n A 1 194 LYS 194 189 189 LYS LYS A . n A 1 195 PHE 195 190 190 PHE PHE A . n A 1 196 ASP 196 191 191 ASP ASP A . n A 1 197 GLU 197 192 192 GLU GLU A . n A 1 198 SER 198 193 193 SER SER A . n A 1 199 LYS 199 194 194 LYS LYS A . n A 1 200 GLU 200 195 195 GLU GLU A . n A 1 201 ILE 201 196 196 ILE ILE A . n A 1 202 ALA 202 197 197 ALA ALA A . n A 1 203 GLU 203 198 198 GLU GLU A . n A 1 204 SER 204 199 199 SER SER A . n A 1 205 SER 205 200 200 SER SER A . n A 1 206 MSE 206 201 201 MSE MSE A . n A 1 207 PHE 207 202 202 PHE PHE A . n A 1 208 ASN 208 203 203 ASN ASN A . n A 1 209 LEU 209 204 204 LEU LEU A . n A 1 210 LEU 210 205 205 LEU LEU A . n A 1 211 GLU 211 206 206 GLU GLU A . n A 1 212 MSE 212 207 207 MSE MSE A . n A 1 213 ASP 213 208 208 ASP ASP A . n A 1 214 ILE 214 209 209 ILE ILE A . n A 1 215 GLU 215 210 210 GLU GLU A . n A 1 216 GLN 216 211 211 GLN GLN A . n A 1 217 VAL 217 212 212 VAL VAL A . n A 1 218 SER 218 213 213 SER SER A . n A 1 219 GLN 219 214 214 GLN GLN A . n A 1 220 LEU 220 215 215 LEU LEU A . n A 1 221 SER 221 216 216 SER SER A . n A 1 222 ALA 222 217 217 ALA ALA A . n A 1 223 LEU 223 218 218 LEU LEU A . n A 1 224 VAL 224 219 219 VAL VAL A . n A 1 225 GLN 225 220 220 GLN GLN A . n A 1 226 ALA 226 221 221 ALA ALA A . n A 1 227 GLN 227 222 222 GLN GLN A . n A 1 228 LEU 228 223 223 LEU LEU A . n A 1 229 GLU 229 224 224 GLU GLU A . n A 1 230 TYR 230 225 225 TYR TYR A . n A 1 231 HIS 231 226 226 HIS HIS A . n A 1 232 LYS 232 227 227 LYS LYS A . n A 1 233 GLN 233 228 228 GLN GLN A . n A 1 234 ALA 234 229 229 ALA ALA A . n A 1 235 VAL 235 230 230 VAL VAL A . n A 1 236 GLN 236 231 231 GLN GLN A . n A 1 237 ILE 237 232 232 ILE ILE A . n A 1 238 LEU 238 233 233 LEU LEU A . n A 1 239 GLN 239 234 234 GLN GLN A . n A 1 240 GLN 240 235 235 GLN GLN A . n A 1 241 VAL 241 236 236 VAL VAL A . n A 1 242 THR 242 237 237 THR THR A . n A 1 243 VAL 243 238 238 VAL VAL A . n A 1 244 ARG 244 239 239 ARG ARG A . n A 1 245 LEU 245 240 240 LEU LEU A . n A 1 246 GLU 246 241 241 GLU GLU A . n A 1 247 GLU 247 242 242 GLU GLU A . n A 1 248 ARG 248 243 243 ARG ARG A . n A 1 249 ILE 249 244 244 ILE ILE A . n A 1 250 ARG 250 245 245 ARG ARG A . n A 1 251 GLN 251 246 246 GLN GLN A . n A 1 252 ALA 252 247 247 ALA ALA A . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 41 A MSE 36 ? MET SELENOMETHIONINE 2 A MSE 53 A MSE 48 ? MET SELENOMETHIONINE 3 A MSE 56 A MSE 51 ? MET SELENOMETHIONINE 4 A MSE 75 A MSE 70 ? MET SELENOMETHIONINE 5 A MSE 102 A MSE 97 ? MET SELENOMETHIONINE 6 A MSE 126 A MSE 121 ? MET SELENOMETHIONINE 7 A MSE 206 A MSE 201 ? MET SELENOMETHIONINE 8 A MSE 212 A MSE 207 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5490 ? 1 MORE -49 ? 1 'SSA (A^2)' 22040 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_655 -x+1,-y,z -1.0000000000 0.0000000000 0.0000000000 127.4240000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-05-02 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SCALEPACK 'data scaling' . ? 2 SOLVE phasing . ? 3 CNS refinement . ? 4 HKL-2000 'data reduction' . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NH1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ARG _pdbx_validate_close_contact.auth_seq_id_1 184 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OE2 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 GLU _pdbx_validate_close_contact.auth_seq_id_2 188 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.14 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MSE A 70 ? ? -134.05 -57.46 2 1 ARG A 102 ? ? -67.18 -71.14 3 1 CYS A 108 ? ? -74.79 -160.05 4 1 PHE A 139 ? ? -131.14 -50.18 5 1 LYS A 149 ? ? -93.96 -99.76 6 1 ARG A 174 ? ? -101.65 56.26 7 1 MSE A 207 ? ? -79.32 20.16 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -4 ? A GLY 1 2 1 Y 1 A PRO -3 ? A PRO 2 3 1 Y 1 A LEU -2 ? A LEU 3 4 1 Y 1 A GLY -1 ? A GLY 4 5 1 Y 1 A SER 0 ? A SER 5 6 1 Y 1 A MSE 1 ? A MSE 6 7 1 Y 1 A SER 2 ? A SER 7 8 1 Y 1 A VAL 3 ? A VAL 8 9 1 Y 1 A ALA 4 ? A ALA 9 10 1 Y 1 A GLY 5 ? A GLY 10 11 1 Y 1 A LEU 6 ? A LEU 11 12 1 Y 1 A LYS 7 ? A LYS 12 13 1 Y 1 A LYS 8 ? A LYS 13 14 1 Y 1 A GLN 9 ? A GLN 14 15 1 Y 1 A PHE 10 ? A PHE 15 16 1 Y 1 A HIS 11 ? A HIS 16 17 1 Y 1 A LYS 12 ? A LYS 17 18 1 Y 1 A ALA 13 ? A ALA 18 19 1 Y 1 A THR 14 ? A THR 19 20 1 Y 1 A GLN 15 ? A GLN 20 21 1 Y 1 A LYS 16 ? A LYS 21 22 1 Y 1 A VAL 17 ? A VAL 22 23 1 Y 1 A SER 18 ? A SER 23 24 1 Y 1 A GLU 19 ? A GLU 24 25 1 Y 1 A LYS 20 ? A LYS 25 26 1 Y 1 A VAL 21 ? A VAL 26 27 1 Y 1 A GLY 22 ? A GLY 27 28 1 Y 1 A GLY 23 ? A GLY 28 29 1 Y 1 A ALA 24 ? A ALA 29 30 1 Y 1 A GLU 25 ? A GLU 30 31 1 Y 1 A ASN 72 ? A ASN 77 32 1 Y 1 A THR 73 ? A THR 78 33 1 Y 1 A MSE 74 ? A MSE 79 34 1 Y 1 A SER 75 ? A SER 80 35 1 Y 1 A LYS 76 ? A LYS 81 36 1 Y 1 A ILE 77 ? A ILE 82 37 1 Y 1 A ARG 78 ? A ARG 83 38 1 Y 1 A GLY 79 ? A GLY 84 39 1 Y 1 A GLN 80 ? A GLN 85 40 1 Y 1 A GLU 81 ? A GLU 86 41 1 Y 1 A LYS 82 ? A LYS 87 42 1 Y 1 A GLY 83 ? A GLY 88 #