HEADER OXIDOREDUCTASE 24-MAR-05 1X0L TITLE CRYSTAL STRUCTURE OF TETRAMERIC HOMOISOCITRATE DEHYDROGENASE FROM AN TITLE 2 EXTREME THERMOPHILE, THERMUS THERMOPHILUS CAVEAT 1X0L CHIRALITY ERROR AT THE CA CENTER OF ARG A 75 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HOMOISOCITRATE DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.1.87; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 GENE: HICDH; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) CODONPLUS RIL; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET26B(+) KEYWDS OXIDOREDUCTASE, DECARBOXYLATING DEHYDROGENASE, LYSINE BIOSYNTHESIS EXPDTA X-RAY DIFFRACTION AUTHOR J.MIYAZAKI,K.ASADA,S.FUSHINOBU,T.KUZUYAMA,M.NISHIYAMA REVDAT 4 13-MAR-24 1X0L 1 REMARK REVDAT 3 13-JUL-11 1X0L 1 VERSN REVDAT 2 24-FEB-09 1X0L 1 VERSN REVDAT 1 04-OCT-05 1X0L 0 JRNL AUTH J.MIYAZAKI,K.ASADA,S.FUSHINOBU,T.KUZUYAMA,M.NISHIYAMA JRNL TITL CRYSTAL STRUCTURE OF TETRAMERIC HOMOISOCITRATE DEHYDROGENASE JRNL TITL 2 FROM AN EXTREME THERMOPHILE, THERMUS THERMOPHILUS: JRNL TITL 3 INVOLVEMENT OF HYDROPHOBIC DIMER-DIMER INTERACTION IN JRNL TITL 4 EXTREMELY HIGH THERMOTOLERANCE JRNL REF J.BACTERIOL. V. 187 6779 2005 JRNL REFN ISSN 0021-9193 JRNL PMID 16166541 JRNL DOI 10.1128/JB.187.19.6779-6788.2005 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.44 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 3039919.400 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 66504 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3357 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.97 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 10219 REMARK 3 BIN R VALUE (WORKING SET) : 0.2340 REMARK 3 BIN FREE R VALUE : 0.2600 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 562 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.011 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4983 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 378 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.06000 REMARK 3 B22 (A**2) : 5.23000 REMARK 3 B33 (A**2) : -3.18000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.22 REMARK 3 ESD FROM SIGMAA (A) : 0.10 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.26 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.13 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.460 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.460 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.170 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 4.010 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 5.550 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.37 REMARK 3 BSOL : 50.14 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER.PARAM REMARK 3 PARAMETER FILE 3 : CIS_PEPTIDE11.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1X0L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-MAR-05. REMARK 100 THE DEPOSITION ID IS D_1000024228. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-03 REMARK 200 TEMPERATURE (KELVIN) : 200.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : CCP4 (TRUNCATE) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: XTALVIEW REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 88.92300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 88.92300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 30.48150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 71.62150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 30.48150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 71.62150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 88.92300 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 30.48150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 71.62150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 88.92300 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 30.48150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 71.62150 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A TETRAMER GENERATED FROM THE REMARK 300 DIMER IN THE ASYMMETRIC UNIT BY THE OPERATIONS: X, -Y, -Z REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 9290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 49860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -71.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER B 72 REMARK 465 PRO B 73 REMARK 465 THR B 74 REMARK 465 ARG B 75 REMARK 465 LYS B 76 REMARK 465 PRO B 264 REMARK 465 ASP B 265 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN A 209 CZ ARG A 216 1.63 REMARK 500 NE2 GLN A 209 NE ARG A 216 1.92 REMARK 500 NE2 GLN A 209 NH1 ARG A 216 1.97 REMARK 500 CD GLN A 209 NH1 ARG A 216 2.14 REMARK 500 CB GLN A 209 NH2 ARG A 216 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG A 307 NE2 GLN B 199 3555 1.17 REMARK 500 NH2 ARG A 307 CD GLN B 199 3555 1.67 REMARK 500 OD2 ASP B 317 OD2 ASP B 317 3555 2.01 REMARK 500 NH2 ARG A 307 OE1 GLN B 199 3555 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 75 CA ARG A 75 CB -0.564 REMARK 500 ARG A 75 CG ARG A 75 CD -0.229 REMARK 500 ARG A 75 NE ARG A 75 CZ -0.153 REMARK 500 ARG A 75 CZ ARG A 75 NH1 -0.215 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 75 CB - CA - C ANGL. DEV. = 15.3 DEGREES REMARK 500 ARG A 75 N - CA - CB ANGL. DEV. = 12.4 DEGREES REMARK 500 ARG A 75 CA - CB - CG ANGL. DEV. = 14.6 DEGREES REMARK 500 ARG A 75 NE - CZ - NH1 ANGL. DEV. = -10.7 DEGREES REMARK 500 ARG A 75 NE - CZ - NH2 ANGL. DEV. = 7.1 DEGREES REMARK 500 LYS A 76 CB - CA - C ANGL. DEV. = 20.0 DEGREES REMARK 500 ASN A 120 N - CA - C ANGL. DEV. = -16.3 DEGREES REMARK 500 ARG A 213 CB - CA - C ANGL. DEV. = -12.9 DEGREES REMARK 500 LYS B 191 CB - CA - C ANGL. DEV. = 19.9 DEGREES REMARK 500 LYS B 269 CB - CA - C ANGL. DEV. = -12.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 113 89.14 -156.62 REMARK 500 LEU A 133 -118.37 59.65 REMARK 500 ASP A 218 -78.67 -125.99 REMARK 500 ASN A 224 -93.90 -29.37 REMARK 500 ALA A 263 60.23 36.39 REMARK 500 GLU A 290 62.84 -101.53 REMARK 500 ASP B 113 86.60 -160.21 REMARK 500 LEU B 133 -120.43 56.84 REMARK 500 ASP B 218 -80.18 -120.94 REMARK 500 ASN B 224 -87.37 -40.60 REMARK 500 ALA B 267 169.05 84.36 REMARK 500 GLU B 290 62.27 -104.56 REMARK 500 PRO B 309 177.69 -54.22 REMARK 500 REMARK 500 REMARK: NULL DBREF 1X0L A 2 334 UNP Q8RQU4 Q8RQU4_THETH 2 334 DBREF 1X0L B 2 334 UNP Q8RQU4 Q8RQU4_THETH 2 334 SEQRES 1 A 333 ALA TYR ARG ILE CYS LEU ILE GLU GLY ASP GLY ILE GLY SEQRES 2 A 333 HIS GLU VAL ILE PRO ALA ALA ARG ARG VAL LEU GLU ALA SEQRES 3 A 333 THR GLY LEU PRO LEU GLU PHE VAL GLU ALA GLU ALA GLY SEQRES 4 A 333 TRP GLU THR PHE GLU ARG ARG GLY THR SER VAL PRO GLU SEQRES 5 A 333 GLU THR VAL GLU LYS ILE LEU SER CYS HIS ALA THR LEU SEQRES 6 A 333 PHE GLY ALA ALA THR SER PRO THR ARG LYS VAL PRO GLY SEQRES 7 A 333 PHE PHE GLY ALA ILE ARG TYR LEU ARG ARG ARG LEU ASP SEQRES 8 A 333 LEU TYR ALA ASN VAL ARG PRO ALA LYS SER ARG PRO VAL SEQRES 9 A 333 PRO GLY SER ARG PRO GLY VAL ASP LEU VAL ILE VAL ARG SEQRES 10 A 333 GLU ASN THR GLU GLY LEU TYR VAL GLU GLN GLU ARG ARG SEQRES 11 A 333 TYR LEU ASP VAL ALA ILE ALA ASP ALA VAL ILE SER LYS SEQRES 12 A 333 LYS ALA SER GLU ARG ILE GLY ARG ALA ALA LEU ARG ILE SEQRES 13 A 333 ALA GLU GLY ARG PRO ARG LYS THR LEU HIS ILE ALA HIS SEQRES 14 A 333 LYS ALA ASN VAL LEU PRO LEU THR GLN GLY LEU PHE LEU SEQRES 15 A 333 ASP THR VAL LYS GLU VAL ALA LYS ASP PHE PRO LEU VAL SEQRES 16 A 333 ASN VAL GLN ASP ILE ILE VAL ASP ASN CYS ALA MET GLN SEQRES 17 A 333 LEU VAL MET ARG PRO GLU ARG PHE ASP VAL ILE VAL THR SEQRES 18 A 333 THR ASN LEU LEU GLY ASP ILE LEU SER ASP LEU ALA ALA SEQRES 19 A 333 GLY LEU VAL GLY GLY LEU GLY LEU ALA PRO SER GLY ASN SEQRES 20 A 333 ILE GLY ASP THR THR ALA VAL PHE GLU PRO VAL HIS GLY SEQRES 21 A 333 SER ALA PRO ASP ILE ALA GLY LYS GLY ILE ALA ASN PRO SEQRES 22 A 333 THR ALA ALA ILE LEU SER ALA ALA MET MET LEU ASP TYR SEQRES 23 A 333 LEU GLY GLU LYS GLU ALA ALA LYS ARG VAL GLU LYS ALA SEQRES 24 A 333 VAL ASP LEU VAL LEU GLU ARG GLY PRO ARG THR PRO ASP SEQRES 25 A 333 LEU GLY GLY ASP ALA THR THR GLU ALA PHE THR GLU ALA SEQRES 26 A 333 VAL VAL GLU ALA LEU LYS SER LEU SEQRES 1 B 333 ALA TYR ARG ILE CYS LEU ILE GLU GLY ASP GLY ILE GLY SEQRES 2 B 333 HIS GLU VAL ILE PRO ALA ALA ARG ARG VAL LEU GLU ALA SEQRES 3 B 333 THR GLY LEU PRO LEU GLU PHE VAL GLU ALA GLU ALA GLY SEQRES 4 B 333 TRP GLU THR PHE GLU ARG ARG GLY THR SER VAL PRO GLU SEQRES 5 B 333 GLU THR VAL GLU LYS ILE LEU SER CYS HIS ALA THR LEU SEQRES 6 B 333 PHE GLY ALA ALA THR SER PRO THR ARG LYS VAL PRO GLY SEQRES 7 B 333 PHE PHE GLY ALA ILE ARG TYR LEU ARG ARG ARG LEU ASP SEQRES 8 B 333 LEU TYR ALA ASN VAL ARG PRO ALA LYS SER ARG PRO VAL SEQRES 9 B 333 PRO GLY SER ARG PRO GLY VAL ASP LEU VAL ILE VAL ARG SEQRES 10 B 333 GLU ASN THR GLU GLY LEU TYR VAL GLU GLN GLU ARG ARG SEQRES 11 B 333 TYR LEU ASP VAL ALA ILE ALA ASP ALA VAL ILE SER LYS SEQRES 12 B 333 LYS ALA SER GLU ARG ILE GLY ARG ALA ALA LEU ARG ILE SEQRES 13 B 333 ALA GLU GLY ARG PRO ARG LYS THR LEU HIS ILE ALA HIS SEQRES 14 B 333 LYS ALA ASN VAL LEU PRO LEU THR GLN GLY LEU PHE LEU SEQRES 15 B 333 ASP THR VAL LYS GLU VAL ALA LYS ASP PHE PRO LEU VAL SEQRES 16 B 333 ASN VAL GLN ASP ILE ILE VAL ASP ASN CYS ALA MET GLN SEQRES 17 B 333 LEU VAL MET ARG PRO GLU ARG PHE ASP VAL ILE VAL THR SEQRES 18 B 333 THR ASN LEU LEU GLY ASP ILE LEU SER ASP LEU ALA ALA SEQRES 19 B 333 GLY LEU VAL GLY GLY LEU GLY LEU ALA PRO SER GLY ASN SEQRES 20 B 333 ILE GLY ASP THR THR ALA VAL PHE GLU PRO VAL HIS GLY SEQRES 21 B 333 SER ALA PRO ASP ILE ALA GLY LYS GLY ILE ALA ASN PRO SEQRES 22 B 333 THR ALA ALA ILE LEU SER ALA ALA MET MET LEU ASP TYR SEQRES 23 B 333 LEU GLY GLU LYS GLU ALA ALA LYS ARG VAL GLU LYS ALA SEQRES 24 B 333 VAL ASP LEU VAL LEU GLU ARG GLY PRO ARG THR PRO ASP SEQRES 25 B 333 LEU GLY GLY ASP ALA THR THR GLU ALA PHE THR GLU ALA SEQRES 26 B 333 VAL VAL GLU ALA LEU LYS SER LEU FORMUL 3 HOH *378(H2 O) HELIX 1 1 ILE A 13 ALA A 27 1 15 HELIX 2 2 GLY A 40 GLY A 48 1 9 HELIX 3 3 PRO A 52 SER A 61 1 10 HELIX 4 4 GLY A 82 LEU A 91 1 10 HELIX 5 5 THR A 121 LEU A 124 5 4 HELIX 6 6 LYS A 144 GLY A 160 1 17 HELIX 7 7 LEU A 177 LYS A 191 1 15 HELIX 8 8 VAL A 203 ARG A 213 1 11 HELIX 9 9 PRO A 214 PHE A 217 5 4 HELIX 10 10 THR A 223 VAL A 238 1 16 HELIX 11 11 ALA A 263 ALA A 267 5 5 HELIX 12 12 PRO A 274 GLY A 289 1 16 HELIX 13 13 GLU A 290 GLY A 308 1 19 HELIX 14 14 THR A 311 GLY A 315 5 5 HELIX 15 15 THR A 319 SER A 333 1 15 HELIX 16 16 ILE B 13 THR B 28 1 16 HELIX 17 17 GLY B 40 GLY B 48 1 9 HELIX 18 18 PRO B 52 CYS B 62 1 11 HELIX 19 19 GLY B 82 ASP B 92 1 11 HELIX 20 20 THR B 121 LEU B 124 5 4 HELIX 21 21 LYS B 144 GLY B 160 1 17 HELIX 22 22 LEU B 177 LYS B 191 1 15 HELIX 23 23 VAL B 203 ARG B 213 1 11 HELIX 24 24 PRO B 214 PHE B 217 5 4 HELIX 25 25 THR B 223 VAL B 238 1 16 HELIX 26 26 GLY B 240 LEU B 243 5 4 HELIX 27 27 PRO B 274 GLY B 289 1 16 HELIX 28 28 GLU B 290 ARG B 307 1 18 HELIX 29 29 THR B 311 GLY B 315 5 5 HELIX 30 30 THR B 319 SER B 333 1 15 SHEET 1 A10 LEU A 32 ALA A 37 0 SHEET 2 A10 TYR A 3 GLY A 10 1 N TYR A 3 O GLU A 33 SHEET 3 A10 ALA A 64 ALA A 69 1 O LEU A 66 N CYS A 6 SHEET 4 A10 ALA A 254 PRO A 258 1 O PHE A 256 N PHE A 67 SHEET 5 A10 PRO A 245 ILE A 249 -1 N ASN A 248 O VAL A 255 SHEET 6 A10 ALA A 95 LYS A 101 -1 N VAL A 97 O GLY A 247 SHEET 7 A10 ASP A 113 GLU A 119 -1 O ILE A 116 N ARG A 98 SHEET 8 A10 VAL A 219 THR A 222 1 O ILE A 220 N VAL A 117 SHEET 9 A10 THR A 165 HIS A 170 1 N HIS A 167 O VAL A 221 SHEET 10 A10 ASN A 197 ILE A 202 1 O ILE A 201 N ILE A 168 SHEET 1 B 4 GLU A 129 TYR A 132 0 SHEET 2 B 4 VAL A 135 SER A 143 -1 O VAL A 135 N TYR A 132 SHEET 3 B 4 VAL B 135 SER B 143 -1 O ALA B 136 N ILE A 142 SHEET 4 B 4 GLU B 129 TYR B 132 -1 N ARG B 130 O ILE B 137 SHEET 1 C10 LEU B 32 ALA B 37 0 SHEET 2 C10 TYR B 3 GLY B 10 1 N ILE B 5 O GLU B 33 SHEET 3 C10 ALA B 64 ALA B 69 1 O LEU B 66 N CYS B 6 SHEET 4 C10 ALA B 254 PRO B 258 1 O PHE B 256 N PHE B 67 SHEET 5 C10 PRO B 245 ILE B 249 -1 N ASN B 248 O VAL B 255 SHEET 6 C10 ALA B 95 LYS B 101 -1 N ALA B 95 O ILE B 249 SHEET 7 C10 ASP B 113 GLU B 119 -1 O ARG B 118 N ASN B 96 SHEET 8 C10 VAL B 219 THR B 222 1 O ILE B 220 N VAL B 117 SHEET 9 C10 THR B 165 HIS B 170 1 N HIS B 167 O VAL B 221 SHEET 10 C10 ASN B 197 ILE B 202 1 O ASN B 197 N LEU B 166 CISPEP 1 GLY A 308 PRO A 309 0 0.24 CRYST1 60.963 143.243 177.846 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016403 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006981 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005623 0.00000