data_1X2I # _entry.id 1X2I # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1X2I pdb_00001x2i 10.2210/pdb1x2i/pdb RCSB RCSB024296 ? ? WWPDB D_1000024296 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-09-13 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1X2I _pdbx_database_status.recvd_initial_deposition_date 2005-04-24 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1J22 'Nuclease domain of the same protein' unspecified PDB 1J23 'Nuclease domain of the same protein' unspecified PDB 1J24 'Nuclease domain of the same protein' unspecified PDB 1J25 'Nuclease domain of the same protein' unspecified PDB 1WP9 'Helicase domain of the same protein' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nishino, T.' 1 'Komori, K.' 2 'Ishino, Y.' 3 'Morikawa, K.' 4 # _citation.id primary _citation.title 'Structural and Functional Analyses of an Archaeal XPF/Rad1/Mus81 Nuclease: Asymmetric DNA Binding and Cleavage Mechanisms' _citation.journal_abbrev STRUCTURE _citation.journal_volume 13 _citation.page_first 1183 _citation.page_last 1192 _citation.year 2005 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16084390 _citation.pdbx_database_id_DOI 10.1016/j.str.2005.04.024 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nishino, T.' 1 ? primary 'Komori, K.' 2 ? primary 'Ishino, Y.' 3 ? primary 'Morikawa, K.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hef helicase/nuclease' 8487.955 2 ? ? 'Helix-hairpin-helix DNA binding domain' ? 2 water nat water 18.015 125 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ATP-dependent RNA helicase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MEKKALTLAERQRLIVEGLPHVSATLARRLLKHFGSVERVFTASVAELMKVEGIGEKIAKEIRRVITAPYIEDEE _entity_poly.pdbx_seq_one_letter_code_can MEKKALTLAERQRLIVEGLPHVSATLARRLLKHFGSVERVFTASVAELMKVEGIGEKIAKEIRRVITAPYIEDEE _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 LYS n 1 4 LYS n 1 5 ALA n 1 6 LEU n 1 7 THR n 1 8 LEU n 1 9 ALA n 1 10 GLU n 1 11 ARG n 1 12 GLN n 1 13 ARG n 1 14 LEU n 1 15 ILE n 1 16 VAL n 1 17 GLU n 1 18 GLY n 1 19 LEU n 1 20 PRO n 1 21 HIS n 1 22 VAL n 1 23 SER n 1 24 ALA n 1 25 THR n 1 26 LEU n 1 27 ALA n 1 28 ARG n 1 29 ARG n 1 30 LEU n 1 31 LEU n 1 32 LYS n 1 33 HIS n 1 34 PHE n 1 35 GLY n 1 36 SER n 1 37 VAL n 1 38 GLU n 1 39 ARG n 1 40 VAL n 1 41 PHE n 1 42 THR n 1 43 ALA n 1 44 SER n 1 45 VAL n 1 46 ALA n 1 47 GLU n 1 48 LEU n 1 49 MET n 1 50 LYS n 1 51 VAL n 1 52 GLU n 1 53 GLY n 1 54 ILE n 1 55 GLY n 1 56 GLU n 1 57 LYS n 1 58 ILE n 1 59 ALA n 1 60 LYS n 1 61 GLU n 1 62 ILE n 1 63 ARG n 1 64 ARG n 1 65 VAL n 1 66 ILE n 1 67 THR n 1 68 ALA n 1 69 PRO n 1 70 TYR n 1 71 ILE n 1 72 GLU n 1 73 ASP n 1 74 GLU n 1 75 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Pyrococcus _entity_src_gen.pdbx_gene_src_gene PF2015 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pyrococcus furiosus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2261 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -2 ? ? ? A . n A 1 2 GLU 2 -1 ? ? ? A . n A 1 3 LYS 3 0 ? ? ? A . n A 1 4 LYS 4 1 ? ? ? A . n A 1 5 ALA 5 2 2 ALA ALA A . n A 1 6 LEU 6 3 3 LEU LEU A . n A 1 7 THR 7 4 4 THR THR A . n A 1 8 LEU 8 5 5 LEU LEU A . n A 1 9 ALA 9 6 6 ALA ALA A . n A 1 10 GLU 10 7 7 GLU GLU A . n A 1 11 ARG 11 8 8 ARG ARG A . n A 1 12 GLN 12 9 9 GLN GLN A . n A 1 13 ARG 13 10 10 ARG ARG A . n A 1 14 LEU 14 11 11 LEU LEU A . n A 1 15 ILE 15 12 12 ILE ILE A . n A 1 16 VAL 16 13 13 VAL VAL A . n A 1 17 GLU 17 14 14 GLU GLU A . n A 1 18 GLY 18 15 15 GLY GLY A . n A 1 19 LEU 19 16 16 LEU LEU A . n A 1 20 PRO 20 17 17 PRO PRO A . n A 1 21 HIS 21 18 18 HIS HIS A . n A 1 22 VAL 22 19 19 VAL VAL A . n A 1 23 SER 23 20 20 SER SER A . n A 1 24 ALA 24 21 21 ALA ALA A . n A 1 25 THR 25 22 22 THR THR A . n A 1 26 LEU 26 23 23 LEU LEU A . n A 1 27 ALA 27 24 24 ALA ALA A . n A 1 28 ARG 28 25 25 ARG ARG A . n A 1 29 ARG 29 26 26 ARG ARG A . n A 1 30 LEU 30 27 27 LEU LEU A . n A 1 31 LEU 31 28 28 LEU LEU A . n A 1 32 LYS 32 29 29 LYS LYS A . n A 1 33 HIS 33 30 30 HIS HIS A . n A 1 34 PHE 34 31 31 PHE PHE A . n A 1 35 GLY 35 32 32 GLY GLY A . n A 1 36 SER 36 33 33 SER SER A . n A 1 37 VAL 37 34 34 VAL VAL A . n A 1 38 GLU 38 35 35 GLU GLU A . n A 1 39 ARG 39 36 36 ARG ARG A . n A 1 40 VAL 40 37 37 VAL VAL A . n A 1 41 PHE 41 38 38 PHE PHE A . n A 1 42 THR 42 39 39 THR THR A . n A 1 43 ALA 43 40 40 ALA ALA A . n A 1 44 SER 44 41 41 SER SER A . n A 1 45 VAL 45 42 42 VAL VAL A . n A 1 46 ALA 46 43 43 ALA ALA A . n A 1 47 GLU 47 44 44 GLU GLU A . n A 1 48 LEU 48 45 45 LEU LEU A . n A 1 49 MET 49 46 46 MET MET A . n A 1 50 LYS 50 47 47 LYS LYS A . n A 1 51 VAL 51 48 48 VAL VAL A . n A 1 52 GLU 52 49 49 GLU GLU A . n A 1 53 GLY 53 50 50 GLY GLY A . n A 1 54 ILE 54 51 51 ILE ILE A . n A 1 55 GLY 55 52 52 GLY GLY A . n A 1 56 GLU 56 53 53 GLU GLU A . n A 1 57 LYS 57 54 54 LYS LYS A . n A 1 58 ILE 58 55 55 ILE ILE A . n A 1 59 ALA 59 56 56 ALA ALA A . n A 1 60 LYS 60 57 57 LYS LYS A . n A 1 61 GLU 61 58 58 GLU GLU A . n A 1 62 ILE 62 59 59 ILE ILE A . n A 1 63 ARG 63 60 60 ARG ARG A . n A 1 64 ARG 64 61 61 ARG ARG A . n A 1 65 VAL 65 62 62 VAL VAL A . n A 1 66 ILE 66 63 63 ILE ILE A . n A 1 67 THR 67 64 64 THR THR A . n A 1 68 ALA 68 65 65 ALA ALA A . n A 1 69 PRO 69 66 66 PRO PRO A . n A 1 70 TYR 70 67 67 TYR TYR A . n A 1 71 ILE 71 68 68 ILE ILE A . n A 1 72 GLU 72 69 69 GLU GLU A . n A 1 73 ASP 73 70 ? ? ? A . n A 1 74 GLU 74 71 ? ? ? A . n A 1 75 GLU 75 72 ? ? ? A . n B 1 1 MET 1 -2 ? ? ? B . n B 1 2 GLU 2 -1 ? ? ? B . n B 1 3 LYS 3 0 ? ? ? B . n B 1 4 LYS 4 1 ? ? ? B . n B 1 5 ALA 5 2 2 ALA ALA B . n B 1 6 LEU 6 3 3 LEU LEU B . n B 1 7 THR 7 4 4 THR THR B . n B 1 8 LEU 8 5 5 LEU LEU B . n B 1 9 ALA 9 6 6 ALA ALA B . n B 1 10 GLU 10 7 7 GLU GLU B . n B 1 11 ARG 11 8 8 ARG ARG B . n B 1 12 GLN 12 9 9 GLN GLN B . n B 1 13 ARG 13 10 10 ARG ARG B . n B 1 14 LEU 14 11 11 LEU LEU B . n B 1 15 ILE 15 12 12 ILE ILE B . n B 1 16 VAL 16 13 13 VAL VAL B . n B 1 17 GLU 17 14 14 GLU GLU B . n B 1 18 GLY 18 15 15 GLY GLY B . n B 1 19 LEU 19 16 16 LEU LEU B . n B 1 20 PRO 20 17 17 PRO PRO B . n B 1 21 HIS 21 18 18 HIS HIS B . n B 1 22 VAL 22 19 19 VAL VAL B . n B 1 23 SER 23 20 20 SER SER B . n B 1 24 ALA 24 21 21 ALA ALA B . n B 1 25 THR 25 22 22 THR THR B . n B 1 26 LEU 26 23 23 LEU LEU B . n B 1 27 ALA 27 24 24 ALA ALA B . n B 1 28 ARG 28 25 25 ARG ARG B . n B 1 29 ARG 29 26 26 ARG ARG B . n B 1 30 LEU 30 27 27 LEU LEU B . n B 1 31 LEU 31 28 28 LEU LEU B . n B 1 32 LYS 32 29 29 LYS LYS B . n B 1 33 HIS 33 30 30 HIS HIS B . n B 1 34 PHE 34 31 31 PHE PHE B . n B 1 35 GLY 35 32 32 GLY GLY B . n B 1 36 SER 36 33 33 SER SER B . n B 1 37 VAL 37 34 34 VAL VAL B . n B 1 38 GLU 38 35 35 GLU GLU B . n B 1 39 ARG 39 36 36 ARG ARG B . n B 1 40 VAL 40 37 37 VAL VAL B . n B 1 41 PHE 41 38 38 PHE PHE B . n B 1 42 THR 42 39 39 THR THR B . n B 1 43 ALA 43 40 40 ALA ALA B . n B 1 44 SER 44 41 41 SER SER B . n B 1 45 VAL 45 42 42 VAL VAL B . n B 1 46 ALA 46 43 43 ALA ALA B . n B 1 47 GLU 47 44 44 GLU GLU B . n B 1 48 LEU 48 45 45 LEU LEU B . n B 1 49 MET 49 46 46 MET MET B . n B 1 50 LYS 50 47 47 LYS LYS B . n B 1 51 VAL 51 48 48 VAL VAL B . n B 1 52 GLU 52 49 49 GLU GLU B . n B 1 53 GLY 53 50 50 GLY GLY B . n B 1 54 ILE 54 51 51 ILE ILE B . n B 1 55 GLY 55 52 52 GLY GLY B . n B 1 56 GLU 56 53 53 GLU GLU B . n B 1 57 LYS 57 54 54 LYS LYS B . n B 1 58 ILE 58 55 55 ILE ILE B . n B 1 59 ALA 59 56 56 ALA ALA B . n B 1 60 LYS 60 57 57 LYS LYS B . n B 1 61 GLU 61 58 58 GLU GLU B . n B 1 62 ILE 62 59 59 ILE ILE B . n B 1 63 ARG 63 60 60 ARG ARG B . n B 1 64 ARG 64 61 61 ARG ARG B . n B 1 65 VAL 65 62 62 VAL VAL B . n B 1 66 ILE 66 63 63 ILE ILE B . n B 1 67 THR 67 64 64 THR THR B . n B 1 68 ALA 68 65 65 ALA ALA B . n B 1 69 PRO 69 66 66 PRO PRO B . n B 1 70 TYR 70 67 67 TYR TYR B . n B 1 71 ILE 71 68 68 ILE ILE B . n B 1 72 GLU 72 69 69 GLU GLU B . n B 1 73 ASP 73 70 ? ? ? B . n B 1 74 GLU 74 71 ? ? ? B . n B 1 75 GLU 75 72 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 73 1 HOH WAT A . C 2 HOH 2 74 4 HOH WAT A . C 2 HOH 3 75 6 HOH WAT A . C 2 HOH 4 76 8 HOH WAT A . C 2 HOH 5 77 9 HOH WAT A . C 2 HOH 6 78 10 HOH WAT A . C 2 HOH 7 79 14 HOH WAT A . C 2 HOH 8 80 15 HOH WAT A . C 2 HOH 9 81 16 HOH WAT A . C 2 HOH 10 82 17 HOH WAT A . C 2 HOH 11 83 20 HOH WAT A . C 2 HOH 12 84 21 HOH WAT A . C 2 HOH 13 85 26 HOH WAT A . C 2 HOH 14 86 27 HOH WAT A . C 2 HOH 15 87 28 HOH WAT A . C 2 HOH 16 88 29 HOH WAT A . C 2 HOH 17 89 30 HOH WAT A . C 2 HOH 18 90 31 HOH WAT A . C 2 HOH 19 91 33 HOH WAT A . C 2 HOH 20 92 36 HOH WAT A . C 2 HOH 21 93 37 HOH WAT A . C 2 HOH 22 94 38 HOH WAT A . C 2 HOH 23 95 40 HOH WAT A . C 2 HOH 24 96 41 HOH WAT A . C 2 HOH 25 97 42 HOH WAT A . C 2 HOH 26 98 43 HOH WAT A . C 2 HOH 27 99 44 HOH WAT A . C 2 HOH 28 100 46 HOH WAT A . C 2 HOH 29 101 47 HOH WAT A . C 2 HOH 30 102 48 HOH WAT A . C 2 HOH 31 103 52 HOH WAT A . C 2 HOH 32 104 56 HOH WAT A . C 2 HOH 33 105 58 HOH WAT A . C 2 HOH 34 106 60 HOH WAT A . C 2 HOH 35 107 68 HOH WAT A . C 2 HOH 36 108 72 HOH WAT A . C 2 HOH 37 109 76 HOH WAT A . C 2 HOH 38 110 77 HOH WAT A . C 2 HOH 39 111 78 HOH WAT A . C 2 HOH 40 112 80 HOH WAT A . C 2 HOH 41 113 82 HOH WAT A . C 2 HOH 42 114 83 HOH WAT A . C 2 HOH 43 115 84 HOH WAT A . C 2 HOH 44 116 90 HOH WAT A . C 2 HOH 45 117 92 HOH WAT A . C 2 HOH 46 118 99 HOH WAT A . C 2 HOH 47 119 102 HOH WAT A . C 2 HOH 48 120 103 HOH WAT A . C 2 HOH 49 121 105 HOH WAT A . C 2 HOH 50 122 106 HOH WAT A . C 2 HOH 51 123 110 HOH WAT A . C 2 HOH 52 124 117 HOH WAT A . C 2 HOH 53 125 118 HOH WAT A . C 2 HOH 54 126 122 HOH WAT A . C 2 HOH 55 127 125 HOH WAT A . D 2 HOH 1 73 2 HOH WAT B . D 2 HOH 2 74 3 HOH WAT B . D 2 HOH 3 75 5 HOH WAT B . D 2 HOH 4 76 7 HOH WAT B . D 2 HOH 5 77 11 HOH WAT B . D 2 HOH 6 78 12 HOH WAT B . D 2 HOH 7 79 13 HOH WAT B . D 2 HOH 8 80 18 HOH WAT B . D 2 HOH 9 81 19 HOH WAT B . D 2 HOH 10 82 22 HOH WAT B . D 2 HOH 11 83 23 HOH WAT B . D 2 HOH 12 84 24 HOH WAT B . D 2 HOH 13 85 25 HOH WAT B . D 2 HOH 14 86 32 HOH WAT B . D 2 HOH 15 87 34 HOH WAT B . D 2 HOH 16 88 35 HOH WAT B . D 2 HOH 17 89 39 HOH WAT B . D 2 HOH 18 90 45 HOH WAT B . D 2 HOH 19 91 49 HOH WAT B . D 2 HOH 20 92 50 HOH WAT B . D 2 HOH 21 93 51 HOH WAT B . D 2 HOH 22 94 53 HOH WAT B . D 2 HOH 23 95 54 HOH WAT B . D 2 HOH 24 96 55 HOH WAT B . D 2 HOH 25 97 57 HOH WAT B . D 2 HOH 26 98 59 HOH WAT B . D 2 HOH 27 99 61 HOH WAT B . D 2 HOH 28 100 62 HOH WAT B . D 2 HOH 29 101 63 HOH WAT B . D 2 HOH 30 102 64 HOH WAT B . D 2 HOH 31 103 65 HOH WAT B . D 2 HOH 32 104 66 HOH WAT B . D 2 HOH 33 105 67 HOH WAT B . D 2 HOH 34 106 69 HOH WAT B . D 2 HOH 35 107 70 HOH WAT B . D 2 HOH 36 108 71 HOH WAT B . D 2 HOH 37 109 73 HOH WAT B . D 2 HOH 38 110 74 HOH WAT B . D 2 HOH 39 111 75 HOH WAT B . D 2 HOH 40 112 79 HOH WAT B . D 2 HOH 41 113 81 HOH WAT B . D 2 HOH 42 114 85 HOH WAT B . D 2 HOH 43 115 86 HOH WAT B . D 2 HOH 44 116 87 HOH WAT B . D 2 HOH 45 117 88 HOH WAT B . D 2 HOH 46 118 89 HOH WAT B . D 2 HOH 47 119 91 HOH WAT B . D 2 HOH 48 120 93 HOH WAT B . D 2 HOH 49 121 94 HOH WAT B . D 2 HOH 50 122 95 HOH WAT B . D 2 HOH 51 123 96 HOH WAT B . D 2 HOH 52 124 97 HOH WAT B . D 2 HOH 53 125 98 HOH WAT B . D 2 HOH 54 126 100 HOH WAT B . D 2 HOH 55 127 101 HOH WAT B . D 2 HOH 56 128 104 HOH WAT B . D 2 HOH 57 129 107 HOH WAT B . D 2 HOH 58 130 108 HOH WAT B . D 2 HOH 59 131 109 HOH WAT B . D 2 HOH 60 132 111 HOH WAT B . D 2 HOH 61 133 112 HOH WAT B . D 2 HOH 62 134 113 HOH WAT B . D 2 HOH 63 135 114 HOH WAT B . D 2 HOH 64 136 115 HOH WAT B . D 2 HOH 65 137 116 HOH WAT B . D 2 HOH 66 138 119 HOH WAT B . D 2 HOH 67 139 120 HOH WAT B . D 2 HOH 68 140 121 HOH WAT B . D 2 HOH 69 141 123 HOH WAT B . D 2 HOH 70 142 124 HOH WAT B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SCALEPACK 'data scaling' . ? 2 SOLVE phasing . ? 3 CNS refinement 1.0 ? 4 HKL-2000 'data reduction' . ? 5 # _cell.entry_id 1X2I _cell.length_a 39.942 _cell.length_b 56.889 _cell.length_c 68.371 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1X2I _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1X2I _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.16 _exptl_crystal.density_percent_sol 57 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method EVAPORATION _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details 'trypsin, Na-Malonate, pH 7.0, EVAPORATION, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 ? ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 CCD MARRESEARCH 2002-10-21 ? 2 CCD MARRESEARCH 2002-10-21 graphite # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M DOUBLE-CRYSTAL 'SINGLE WAVELENGTH' x-ray 2 2 M Diamond MAD x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.0000 1.0 2 0.9729 1.0 3 0.97774 1.0 4 0.97779 1.0 5 0.9757 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'SPRING-8 BEAMLINE BL41XU' SPring-8 BL41XU ? 1.0000 2 SYNCHROTRON 'SPRING-8 BEAMLINE BL38B1' SPring-8 BL38B1 ? '0.9729, 0.97774, 0.97779, 0.9757' # _reflns.entry_id 1X2I _reflns.observed_criterion_sigma_F 1 _reflns.observed_criterion_sigma_I 1 _reflns.d_resolution_high 1.45 _reflns.d_resolution_low 20 _reflns.number_all ? _reflns.number_obs 27454 _reflns.percent_possible_obs 96.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.061 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1,2 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.45 _reflns_shell.d_res_low 1.50 _reflns_shell.percent_possible_all 98.3 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.104 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1X2I _refine.ls_d_res_high 1.45 _refine.ls_d_res_low 20 _refine.pdbx_ls_sigma_F 1 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 28301 _refine.ls_number_reflns_obs 27184 _refine.ls_number_reflns_R_free 2717 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_all 0.2234 _refine.ls_R_factor_obs 0.2234 _refine.ls_R_factor_R_work 0.2218 _refine.ls_R_factor_R_free 0.2383 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1X2I _refine_analyze.Luzzati_coordinate_error_obs 0.18 _refine_analyze.Luzzati_sigma_a_obs -0.04 _refine_analyze.Luzzati_d_res_low_obs 5 _refine_analyze.Luzzati_coordinate_error_free 0.21 _refine_analyze.Luzzati_sigma_a_free 0.04 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1066 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 125 _refine_hist.number_atoms_total 1191 _refine_hist.d_res_high 1.45 _refine_hist.d_res_low 20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_improper_angle_d 0.70990 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 18.37 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d 0.003692 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d 1.02152 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.45 _refine_ls_shell.d_res_low 1.50 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.2103 _refine_ls_shell.percent_reflns_obs 96.72 _refine_ls_shell.R_factor_R_free 0.2472 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 252 _refine_ls_shell.number_reflns_obs 2685 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1X2I _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1X2I _struct.title 'Crystal Structure Of Archaeal Xpf/Mus81 Homolog, Hef From Pyrococcus Furiosus, Helix-hairpin-helix Domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1X2I _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'alpha helix, helix-hairpin-helix DNA binding domain, homodimer, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8TZH8_PYRFU _struct_ref.pdbx_db_accession Q8TZH8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code EKKALTLAERQRLIVEGLPHVSATLARRLLKHFGSVERVFTASVAELMKVEGIGEKIAKEIRRVITAPYIEDEE _struct_ref.pdbx_align_begin 691 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1X2I A 2 ? 75 ? Q8TZH8 691 ? 764 ? -1 72 2 1 1X2I B 2 ? 75 ? Q8TZH8 691 ? 764 ? -1 72 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1X2I MET A 1 ? UNP Q8TZH8 ? ? 'initiating methionine' -2 1 2 1X2I MET B 1 ? UNP Q8TZH8 ? ? 'initiating methionine' -2 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2500 ? 1 MORE -14 ? 1 'SSA (A^2)' 6920 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 7 ? GLU A 17 ? THR A 4 GLU A 14 1 ? 11 HELX_P HELX_P2 2 SER A 23 ? GLY A 35 ? SER A 20 GLY A 32 1 ? 13 HELX_P HELX_P3 3 SER A 36 ? ALA A 43 ? SER A 33 ALA A 40 1 ? 8 HELX_P HELX_P4 4 SER A 44 ? MET A 49 ? SER A 41 MET A 46 1 ? 6 HELX_P HELX_P5 5 GLY A 55 ? ALA A 68 ? GLY A 52 ALA A 65 1 ? 14 HELX_P HELX_P6 6 THR B 7 ? GLU B 17 ? THR B 4 GLU B 14 1 ? 11 HELX_P HELX_P7 7 SER B 23 ? GLY B 35 ? SER B 20 GLY B 32 1 ? 13 HELX_P HELX_P8 8 SER B 36 ? ALA B 43 ? SER B 33 ALA B 40 1 ? 8 HELX_P HELX_P9 9 SER B 44 ? MET B 49 ? SER B 41 MET B 46 1 ? 6 HELX_P HELX_P10 10 GLY B 55 ? ALA B 68 ? GLY B 52 ALA B 65 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id HIS _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 18 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 72.51 _pdbx_validate_torsion.psi -1.25 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -2 ? A MET 1 2 1 Y 1 A GLU -1 ? A GLU 2 3 1 Y 1 A LYS 0 ? A LYS 3 4 1 Y 1 A LYS 1 ? A LYS 4 5 1 Y 1 A ASP 70 ? A ASP 73 6 1 Y 1 A GLU 71 ? A GLU 74 7 1 Y 1 A GLU 72 ? A GLU 75 8 1 Y 1 B MET -2 ? B MET 1 9 1 Y 1 B GLU -1 ? B GLU 2 10 1 Y 1 B LYS 0 ? B LYS 3 11 1 Y 1 B LYS 1 ? B LYS 4 12 1 Y 1 B ASP 70 ? B ASP 73 13 1 Y 1 B GLU 71 ? B GLU 74 14 1 Y 1 B GLU 72 ? B GLU 75 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASP N N N N 41 ASP CA C N S 42 ASP C C N N 43 ASP O O N N 44 ASP CB C N N 45 ASP CG C N N 46 ASP OD1 O N N 47 ASP OD2 O N N 48 ASP OXT O N N 49 ASP H H N N 50 ASP H2 H N N 51 ASP HA H N N 52 ASP HB2 H N N 53 ASP HB3 H N N 54 ASP HD2 H N N 55 ASP HXT H N N 56 GLN N N N N 57 GLN CA C N S 58 GLN C C N N 59 GLN O O N N 60 GLN CB C N N 61 GLN CG C N N 62 GLN CD C N N 63 GLN OE1 O N N 64 GLN NE2 N N N 65 GLN OXT O N N 66 GLN H H N N 67 GLN H2 H N N 68 GLN HA H N N 69 GLN HB2 H N N 70 GLN HB3 H N N 71 GLN HG2 H N N 72 GLN HG3 H N N 73 GLN HE21 H N N 74 GLN HE22 H N N 75 GLN HXT H N N 76 GLU N N N N 77 GLU CA C N S 78 GLU C C N N 79 GLU O O N N 80 GLU CB C N N 81 GLU CG C N N 82 GLU CD C N N 83 GLU OE1 O N N 84 GLU OE2 O N N 85 GLU OXT O N N 86 GLU H H N N 87 GLU H2 H N N 88 GLU HA H N N 89 GLU HB2 H N N 90 GLU HB3 H N N 91 GLU HG2 H N N 92 GLU HG3 H N N 93 GLU HE2 H N N 94 GLU HXT H N N 95 GLY N N N N 96 GLY CA C N N 97 GLY C C N N 98 GLY O O N N 99 GLY OXT O N N 100 GLY H H N N 101 GLY H2 H N N 102 GLY HA2 H N N 103 GLY HA3 H N N 104 GLY HXT H N N 105 HIS N N N N 106 HIS CA C N S 107 HIS C C N N 108 HIS O O N N 109 HIS CB C N N 110 HIS CG C Y N 111 HIS ND1 N Y N 112 HIS CD2 C Y N 113 HIS CE1 C Y N 114 HIS NE2 N Y N 115 HIS OXT O N N 116 HIS H H N N 117 HIS H2 H N N 118 HIS HA H N N 119 HIS HB2 H N N 120 HIS HB3 H N N 121 HIS HD1 H N N 122 HIS HD2 H N N 123 HIS HE1 H N N 124 HIS HE2 H N N 125 HIS HXT H N N 126 HOH O O N N 127 HOH H1 H N N 128 HOH H2 H N N 129 ILE N N N N 130 ILE CA C N S 131 ILE C C N N 132 ILE O O N N 133 ILE CB C N S 134 ILE CG1 C N N 135 ILE CG2 C N N 136 ILE CD1 C N N 137 ILE OXT O N N 138 ILE H H N N 139 ILE H2 H N N 140 ILE HA H N N 141 ILE HB H N N 142 ILE HG12 H N N 143 ILE HG13 H N N 144 ILE HG21 H N N 145 ILE HG22 H N N 146 ILE HG23 H N N 147 ILE HD11 H N N 148 ILE HD12 H N N 149 ILE HD13 H N N 150 ILE HXT H N N 151 LEU N N N N 152 LEU CA C N S 153 LEU C C N N 154 LEU O O N N 155 LEU CB C N N 156 LEU CG C N N 157 LEU CD1 C N N 158 LEU CD2 C N N 159 LEU OXT O N N 160 LEU H H N N 161 LEU H2 H N N 162 LEU HA H N N 163 LEU HB2 H N N 164 LEU HB3 H N N 165 LEU HG H N N 166 LEU HD11 H N N 167 LEU HD12 H N N 168 LEU HD13 H N N 169 LEU HD21 H N N 170 LEU HD22 H N N 171 LEU HD23 H N N 172 LEU HXT H N N 173 LYS N N N N 174 LYS CA C N S 175 LYS C C N N 176 LYS O O N N 177 LYS CB C N N 178 LYS CG C N N 179 LYS CD C N N 180 LYS CE C N N 181 LYS NZ N N N 182 LYS OXT O N N 183 LYS H H N N 184 LYS H2 H N N 185 LYS HA H N N 186 LYS HB2 H N N 187 LYS HB3 H N N 188 LYS HG2 H N N 189 LYS HG3 H N N 190 LYS HD2 H N N 191 LYS HD3 H N N 192 LYS HE2 H N N 193 LYS HE3 H N N 194 LYS HZ1 H N N 195 LYS HZ2 H N N 196 LYS HZ3 H N N 197 LYS HXT H N N 198 MET N N N N 199 MET CA C N S 200 MET C C N N 201 MET O O N N 202 MET CB C N N 203 MET CG C N N 204 MET SD S N N 205 MET CE C N N 206 MET OXT O N N 207 MET H H N N 208 MET H2 H N N 209 MET HA H N N 210 MET HB2 H N N 211 MET HB3 H N N 212 MET HG2 H N N 213 MET HG3 H N N 214 MET HE1 H N N 215 MET HE2 H N N 216 MET HE3 H N N 217 MET HXT H N N 218 PHE N N N N 219 PHE CA C N S 220 PHE C C N N 221 PHE O O N N 222 PHE CB C N N 223 PHE CG C Y N 224 PHE CD1 C Y N 225 PHE CD2 C Y N 226 PHE CE1 C Y N 227 PHE CE2 C Y N 228 PHE CZ C Y N 229 PHE OXT O N N 230 PHE H H N N 231 PHE H2 H N N 232 PHE HA H N N 233 PHE HB2 H N N 234 PHE HB3 H N N 235 PHE HD1 H N N 236 PHE HD2 H N N 237 PHE HE1 H N N 238 PHE HE2 H N N 239 PHE HZ H N N 240 PHE HXT H N N 241 PRO N N N N 242 PRO CA C N S 243 PRO C C N N 244 PRO O O N N 245 PRO CB C N N 246 PRO CG C N N 247 PRO CD C N N 248 PRO OXT O N N 249 PRO H H N N 250 PRO HA H N N 251 PRO HB2 H N N 252 PRO HB3 H N N 253 PRO HG2 H N N 254 PRO HG3 H N N 255 PRO HD2 H N N 256 PRO HD3 H N N 257 PRO HXT H N N 258 SER N N N N 259 SER CA C N S 260 SER C C N N 261 SER O O N N 262 SER CB C N N 263 SER OG O N N 264 SER OXT O N N 265 SER H H N N 266 SER H2 H N N 267 SER HA H N N 268 SER HB2 H N N 269 SER HB3 H N N 270 SER HG H N N 271 SER HXT H N N 272 THR N N N N 273 THR CA C N S 274 THR C C N N 275 THR O O N N 276 THR CB C N R 277 THR OG1 O N N 278 THR CG2 C N N 279 THR OXT O N N 280 THR H H N N 281 THR H2 H N N 282 THR HA H N N 283 THR HB H N N 284 THR HG1 H N N 285 THR HG21 H N N 286 THR HG22 H N N 287 THR HG23 H N N 288 THR HXT H N N 289 TYR N N N N 290 TYR CA C N S 291 TYR C C N N 292 TYR O O N N 293 TYR CB C N N 294 TYR CG C Y N 295 TYR CD1 C Y N 296 TYR CD2 C Y N 297 TYR CE1 C Y N 298 TYR CE2 C Y N 299 TYR CZ C Y N 300 TYR OH O N N 301 TYR OXT O N N 302 TYR H H N N 303 TYR H2 H N N 304 TYR HA H N N 305 TYR HB2 H N N 306 TYR HB3 H N N 307 TYR HD1 H N N 308 TYR HD2 H N N 309 TYR HE1 H N N 310 TYR HE2 H N N 311 TYR HH H N N 312 TYR HXT H N N 313 VAL N N N N 314 VAL CA C N S 315 VAL C C N N 316 VAL O O N N 317 VAL CB C N N 318 VAL CG1 C N N 319 VAL CG2 C N N 320 VAL OXT O N N 321 VAL H H N N 322 VAL H2 H N N 323 VAL HA H N N 324 VAL HB H N N 325 VAL HG11 H N N 326 VAL HG12 H N N 327 VAL HG13 H N N 328 VAL HG21 H N N 329 VAL HG22 H N N 330 VAL HG23 H N N 331 VAL HXT H N N 332 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASP N CA sing N N 39 ASP N H sing N N 40 ASP N H2 sing N N 41 ASP CA C sing N N 42 ASP CA CB sing N N 43 ASP CA HA sing N N 44 ASP C O doub N N 45 ASP C OXT sing N N 46 ASP CB CG sing N N 47 ASP CB HB2 sing N N 48 ASP CB HB3 sing N N 49 ASP CG OD1 doub N N 50 ASP CG OD2 sing N N 51 ASP OD2 HD2 sing N N 52 ASP OXT HXT sing N N 53 GLN N CA sing N N 54 GLN N H sing N N 55 GLN N H2 sing N N 56 GLN CA C sing N N 57 GLN CA CB sing N N 58 GLN CA HA sing N N 59 GLN C O doub N N 60 GLN C OXT sing N N 61 GLN CB CG sing N N 62 GLN CB HB2 sing N N 63 GLN CB HB3 sing N N 64 GLN CG CD sing N N 65 GLN CG HG2 sing N N 66 GLN CG HG3 sing N N 67 GLN CD OE1 doub N N 68 GLN CD NE2 sing N N 69 GLN NE2 HE21 sing N N 70 GLN NE2 HE22 sing N N 71 GLN OXT HXT sing N N 72 GLU N CA sing N N 73 GLU N H sing N N 74 GLU N H2 sing N N 75 GLU CA C sing N N 76 GLU CA CB sing N N 77 GLU CA HA sing N N 78 GLU C O doub N N 79 GLU C OXT sing N N 80 GLU CB CG sing N N 81 GLU CB HB2 sing N N 82 GLU CB HB3 sing N N 83 GLU CG CD sing N N 84 GLU CG HG2 sing N N 85 GLU CG HG3 sing N N 86 GLU CD OE1 doub N N 87 GLU CD OE2 sing N N 88 GLU OE2 HE2 sing N N 89 GLU OXT HXT sing N N 90 GLY N CA sing N N 91 GLY N H sing N N 92 GLY N H2 sing N N 93 GLY CA C sing N N 94 GLY CA HA2 sing N N 95 GLY CA HA3 sing N N 96 GLY C O doub N N 97 GLY C OXT sing N N 98 GLY OXT HXT sing N N 99 HIS N CA sing N N 100 HIS N H sing N N 101 HIS N H2 sing N N 102 HIS CA C sing N N 103 HIS CA CB sing N N 104 HIS CA HA sing N N 105 HIS C O doub N N 106 HIS C OXT sing N N 107 HIS CB CG sing N N 108 HIS CB HB2 sing N N 109 HIS CB HB3 sing N N 110 HIS CG ND1 sing Y N 111 HIS CG CD2 doub Y N 112 HIS ND1 CE1 doub Y N 113 HIS ND1 HD1 sing N N 114 HIS CD2 NE2 sing Y N 115 HIS CD2 HD2 sing N N 116 HIS CE1 NE2 sing Y N 117 HIS CE1 HE1 sing N N 118 HIS NE2 HE2 sing N N 119 HIS OXT HXT sing N N 120 HOH O H1 sing N N 121 HOH O H2 sing N N 122 ILE N CA sing N N 123 ILE N H sing N N 124 ILE N H2 sing N N 125 ILE CA C sing N N 126 ILE CA CB sing N N 127 ILE CA HA sing N N 128 ILE C O doub N N 129 ILE C OXT sing N N 130 ILE CB CG1 sing N N 131 ILE CB CG2 sing N N 132 ILE CB HB sing N N 133 ILE CG1 CD1 sing N N 134 ILE CG1 HG12 sing N N 135 ILE CG1 HG13 sing N N 136 ILE CG2 HG21 sing N N 137 ILE CG2 HG22 sing N N 138 ILE CG2 HG23 sing N N 139 ILE CD1 HD11 sing N N 140 ILE CD1 HD12 sing N N 141 ILE CD1 HD13 sing N N 142 ILE OXT HXT sing N N 143 LEU N CA sing N N 144 LEU N H sing N N 145 LEU N H2 sing N N 146 LEU CA C sing N N 147 LEU CA CB sing N N 148 LEU CA HA sing N N 149 LEU C O doub N N 150 LEU C OXT sing N N 151 LEU CB CG sing N N 152 LEU CB HB2 sing N N 153 LEU CB HB3 sing N N 154 LEU CG CD1 sing N N 155 LEU CG CD2 sing N N 156 LEU CG HG sing N N 157 LEU CD1 HD11 sing N N 158 LEU CD1 HD12 sing N N 159 LEU CD1 HD13 sing N N 160 LEU CD2 HD21 sing N N 161 LEU CD2 HD22 sing N N 162 LEU CD2 HD23 sing N N 163 LEU OXT HXT sing N N 164 LYS N CA sing N N 165 LYS N H sing N N 166 LYS N H2 sing N N 167 LYS CA C sing N N 168 LYS CA CB sing N N 169 LYS CA HA sing N N 170 LYS C O doub N N 171 LYS C OXT sing N N 172 LYS CB CG sing N N 173 LYS CB HB2 sing N N 174 LYS CB HB3 sing N N 175 LYS CG CD sing N N 176 LYS CG HG2 sing N N 177 LYS CG HG3 sing N N 178 LYS CD CE sing N N 179 LYS CD HD2 sing N N 180 LYS CD HD3 sing N N 181 LYS CE NZ sing N N 182 LYS CE HE2 sing N N 183 LYS CE HE3 sing N N 184 LYS NZ HZ1 sing N N 185 LYS NZ HZ2 sing N N 186 LYS NZ HZ3 sing N N 187 LYS OXT HXT sing N N 188 MET N CA sing N N 189 MET N H sing N N 190 MET N H2 sing N N 191 MET CA C sing N N 192 MET CA CB sing N N 193 MET CA HA sing N N 194 MET C O doub N N 195 MET C OXT sing N N 196 MET CB CG sing N N 197 MET CB HB2 sing N N 198 MET CB HB3 sing N N 199 MET CG SD sing N N 200 MET CG HG2 sing N N 201 MET CG HG3 sing N N 202 MET SD CE sing N N 203 MET CE HE1 sing N N 204 MET CE HE2 sing N N 205 MET CE HE3 sing N N 206 MET OXT HXT sing N N 207 PHE N CA sing N N 208 PHE N H sing N N 209 PHE N H2 sing N N 210 PHE CA C sing N N 211 PHE CA CB sing N N 212 PHE CA HA sing N N 213 PHE C O doub N N 214 PHE C OXT sing N N 215 PHE CB CG sing N N 216 PHE CB HB2 sing N N 217 PHE CB HB3 sing N N 218 PHE CG CD1 doub Y N 219 PHE CG CD2 sing Y N 220 PHE CD1 CE1 sing Y N 221 PHE CD1 HD1 sing N N 222 PHE CD2 CE2 doub Y N 223 PHE CD2 HD2 sing N N 224 PHE CE1 CZ doub Y N 225 PHE CE1 HE1 sing N N 226 PHE CE2 CZ sing Y N 227 PHE CE2 HE2 sing N N 228 PHE CZ HZ sing N N 229 PHE OXT HXT sing N N 230 PRO N CA sing N N 231 PRO N CD sing N N 232 PRO N H sing N N 233 PRO CA C sing N N 234 PRO CA CB sing N N 235 PRO CA HA sing N N 236 PRO C O doub N N 237 PRO C OXT sing N N 238 PRO CB CG sing N N 239 PRO CB HB2 sing N N 240 PRO CB HB3 sing N N 241 PRO CG CD sing N N 242 PRO CG HG2 sing N N 243 PRO CG HG3 sing N N 244 PRO CD HD2 sing N N 245 PRO CD HD3 sing N N 246 PRO OXT HXT sing N N 247 SER N CA sing N N 248 SER N H sing N N 249 SER N H2 sing N N 250 SER CA C sing N N 251 SER CA CB sing N N 252 SER CA HA sing N N 253 SER C O doub N N 254 SER C OXT sing N N 255 SER CB OG sing N N 256 SER CB HB2 sing N N 257 SER CB HB3 sing N N 258 SER OG HG sing N N 259 SER OXT HXT sing N N 260 THR N CA sing N N 261 THR N H sing N N 262 THR N H2 sing N N 263 THR CA C sing N N 264 THR CA CB sing N N 265 THR CA HA sing N N 266 THR C O doub N N 267 THR C OXT sing N N 268 THR CB OG1 sing N N 269 THR CB CG2 sing N N 270 THR CB HB sing N N 271 THR OG1 HG1 sing N N 272 THR CG2 HG21 sing N N 273 THR CG2 HG22 sing N N 274 THR CG2 HG23 sing N N 275 THR OXT HXT sing N N 276 TYR N CA sing N N 277 TYR N H sing N N 278 TYR N H2 sing N N 279 TYR CA C sing N N 280 TYR CA CB sing N N 281 TYR CA HA sing N N 282 TYR C O doub N N 283 TYR C OXT sing N N 284 TYR CB CG sing N N 285 TYR CB HB2 sing N N 286 TYR CB HB3 sing N N 287 TYR CG CD1 doub Y N 288 TYR CG CD2 sing Y N 289 TYR CD1 CE1 sing Y N 290 TYR CD1 HD1 sing N N 291 TYR CD2 CE2 doub Y N 292 TYR CD2 HD2 sing N N 293 TYR CE1 CZ doub Y N 294 TYR CE1 HE1 sing N N 295 TYR CE2 CZ sing Y N 296 TYR CE2 HE2 sing N N 297 TYR CZ OH sing N N 298 TYR OH HH sing N N 299 TYR OXT HXT sing N N 300 VAL N CA sing N N 301 VAL N H sing N N 302 VAL N H2 sing N N 303 VAL CA C sing N N 304 VAL CA CB sing N N 305 VAL CA HA sing N N 306 VAL C O doub N N 307 VAL C OXT sing N N 308 VAL CB CG1 sing N N 309 VAL CB CG2 sing N N 310 VAL CB HB sing N N 311 VAL CG1 HG11 sing N N 312 VAL CG1 HG12 sing N N 313 VAL CG1 HG13 sing N N 314 VAL CG2 HG21 sing N N 315 VAL CG2 HG22 sing N N 316 VAL CG2 HG23 sing N N 317 VAL OXT HXT sing N N 318 # _atom_sites.entry_id 1X2I _atom_sites.fract_transf_matrix[1][1] 0.025036 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017578 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014626 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_