HEADER UNKNOWN FUNCTION 10-MAY-05 1X3Q TITLE 3D SOLUTION STRUCTURE OF THE CHROMO-2 DOMAIN OF CPSRP43 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CPSRP43; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CHROMO-2 DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 TISSUE: CHLOROPLAST; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CHROMO-2 DOMAIN, CPSRP43, LHCP, THYLAKOID, PROTEIN TRANSLOCATION, KEYWDS 2 UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 MDLTYP MINIMIZED AVERAGE AUTHOR V.SIVARAJA,T.K.S.KUMAR,R.HENRY,C.YU REVDAT 3 02-MAR-22 1X3Q 1 REMARK SEQADV REVDAT 2 24-FEB-09 1X3Q 1 VERSN REVDAT 1 20-SEP-05 1X3Q 0 JRNL AUTH V.SIVARAJA,T.K.S.KUMAR,R.HENRY,C.YU JRNL TITL 3D SOLUTION STRUCTURE OF THE CHROMO-2 DOMAIN OF CPSRP43 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CNS 1.1 REMARK 3 AUTHORS : BRUKER (XWINNMR), REMARK 3 BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-KUNSTLEVE,JIANG,KUSZEWSKI, REMARK 3 NILGES, PANNU,READ,RICE,SIMONSON,WARREN (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1X3Q COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1000024340. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 100MM PHOSPHATE BUFFER, 100MM REMARK 210 NACL; 90% H20, 10% D20 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D TOCSY; 2D NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY; HNHA REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS 1.1 REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 20 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING STANDARD 2D AND 3D NMR REMARK 210 EXPERIMENTS REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 3 TYR A 25 CZ TYR A 25 CE2 0.112 REMARK 500 7 TYR A 7 CE1 TYR A 7 CZ -0.088 REMARK 500 7 TYR A 7 CZ TYR A 7 CE2 0.088 REMARK 500 8 TYR A 25 CZ TYR A 25 OH 0.125 REMARK 500 11 TYR A 25 CE1 TYR A 25 CZ -0.081 REMARK 500 11 TYR A 25 CZ TYR A 25 CE2 0.107 REMARK 500 15 TYR A 25 CE1 TYR A 25 CZ -0.084 REMARK 500 15 TYR A 25 CZ TYR A 25 CE2 0.122 REMARK 500 19 TYR A 25 CE1 TYR A 25 CZ -0.085 REMARK 500 19 TYR A 25 CZ TYR A 25 CE2 0.091 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 -153.12 -177.52 REMARK 500 1 VAL A 4 -77.61 -71.48 REMARK 500 1 PHE A 5 -147.25 -68.70 REMARK 500 1 ASP A 11 -25.17 160.75 REMARK 500 1 ILE A 13 123.10 32.06 REMARK 500 1 LYS A 16 -160.62 -178.43 REMARK 500 1 ARG A 17 126.33 89.38 REMARK 500 1 ASP A 22 110.09 -178.00 REMARK 500 1 LEU A 26 72.96 174.07 REMARK 500 1 ARG A 28 -42.07 -131.25 REMARK 500 1 TRP A 29 -87.14 -47.46 REMARK 500 1 LYS A 30 -95.27 -84.93 REMARK 500 1 ASP A 31 -172.35 43.52 REMARK 500 1 TRP A 37 -174.10 -54.50 REMARK 500 1 VAL A 38 -63.97 -125.22 REMARK 500 1 VAL A 43 36.05 -97.34 REMARK 500 1 ASP A 53 -39.74 -33.11 REMARK 500 1 LEU A 55 -92.05 -63.66 REMARK 500 2 GLN A 3 -149.84 -65.81 REMARK 500 2 VAL A 4 -98.48 -63.31 REMARK 500 2 PHE A 5 -105.44 -59.81 REMARK 500 2 ALA A 8 60.38 -115.64 REMARK 500 2 ASP A 11 -20.23 161.69 REMARK 500 2 ILE A 13 123.29 27.67 REMARK 500 2 LYS A 16 -159.29 -179.06 REMARK 500 2 ARG A 17 130.78 76.76 REMARK 500 2 LYS A 19 161.74 -41.19 REMARK 500 2 LYS A 21 -36.55 -139.11 REMARK 500 2 LEU A 26 80.46 154.67 REMARK 500 2 VAL A 27 34.15 -141.64 REMARK 500 2 TRP A 29 -96.16 -48.81 REMARK 500 2 LYS A 30 -95.80 -86.43 REMARK 500 2 ASP A 31 -159.68 44.52 REMARK 500 2 LYS A 39 136.94 -24.51 REMARK 500 2 VAL A 43 37.91 -92.90 REMARK 500 2 ASP A 53 -36.13 -32.81 REMARK 500 2 LEU A 55 -96.03 -66.95 REMARK 500 3 GLN A 3 139.68 65.31 REMARK 500 3 VAL A 4 -87.66 -68.74 REMARK 500 3 PHE A 5 -124.61 -63.73 REMARK 500 3 ASP A 11 -17.41 170.95 REMARK 500 3 ILE A 13 119.97 36.68 REMARK 500 3 LYS A 16 -156.70 -178.61 REMARK 500 3 ARG A 17 125.60 72.82 REMARK 500 3 LYS A 19 150.49 -45.45 REMARK 500 3 ASP A 22 111.91 177.59 REMARK 500 3 LEU A 26 75.85 158.12 REMARK 500 3 TRP A 29 -88.26 -45.61 REMARK 500 3 ASP A 31 143.26 -28.68 REMARK 500 3 LYS A 39 141.34 -23.34 REMARK 500 REMARK 500 THIS ENTRY HAS 373 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 3 TYR A 25 0.09 SIDE CHAIN REMARK 500 5 ARG A 28 0.07 SIDE CHAIN REMARK 500 8 TYR A 25 0.15 SIDE CHAIN REMARK 500 8 TYR A 51 0.05 SIDE CHAIN REMARK 500 11 TYR A 25 0.07 SIDE CHAIN REMARK 500 14 TYR A 25 0.09 SIDE CHAIN REMARK 500 15 TYR A 25 0.10 SIDE CHAIN REMARK 500 19 TYR A 7 0.06 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1X3P RELATED DB: PDB REMARK 900 CHROMO-3 DOMAIN OF CPSRP43 DBREF 1X3Q A 3 57 UNP O22265 O22265_ARATH 268 322 SEQADV 1X3Q GLY A 1 UNP O22265 CLONING ARTIFACT SEQADV 1X3Q SER A 2 UNP O22265 CLONING ARTIFACT SEQRES 1 A 57 GLY SER GLN VAL PHE GLU TYR ALA GLU VAL ASP GLU ILE SEQRES 2 A 57 VAL GLU LYS ARG GLY LYS GLY LYS ASP VAL GLU TYR LEU SEQRES 3 A 57 VAL ARG TRP LYS ASP GLY GLY ASP CYS GLU TRP VAL LYS SEQRES 4 A 57 GLY VAL HIS VAL ALA GLU ASP VAL ALA LYS ASP TYR GLU SEQRES 5 A 57 ASP GLY LEU GLU TYR HELIX 1 1 ALA A 44 LEU A 55 1 12 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1