HEADER RNA BINDING PROTEIN 14-MAY-05 1X4A TITLE SOLUTION STRUCTURE OF RRM DOMAIN IN SPLICING FACTOR SF2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPLICING FACTOR, ARGININE/SERINE-RICH 1 (SPLICING FACTOR 2, COMPND 3 ALTERNATE SPLICING FACTOR) VARIANT; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: RRM DOMAIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SFRS1; ASF; SF2; SF2P33; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P040315-67; SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS KEYWDS STRUCTURE GENOMICS, SURP DOMAIN, SPLICING FACTOR SF2, STRUCTURAL KEYWDS 2 GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND KEYWDS 3 FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 4 INITIATIVE, RSGI, RNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 02-MAR-22 1X4A 1 REMARK SEQADV REVDAT 2 24-FEB-09 1X4A 1 VERSN REVDAT 1 14-NOV-05 1X4A 0 JRNL AUTH F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF RRM DOMAIN IN SPLICING FACTOR SF2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 2.6, CYANA 1.0.8 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT,P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1X4A COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1000024360. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.8MM U-15,13C; 20MM PHOSPHATE REMARK 210 BUFFER NA; 100MM NACL; 1MM D-DTT; REMARK 210 0.02% NAN3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.863, CYANA 1.0.8 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES WITH REMARK 210 THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 75 H TYR A 79 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 3 162.38 179.35 REMARK 500 1 SER A 6 138.47 64.09 REMARK 500 1 SER A 9 160.73 179.46 REMARK 500 1 ASN A 20 113.05 -172.20 REMARK 500 1 ASP A 33 45.74 -102.84 REMARK 500 1 ASP A 51 144.84 -170.41 REMARK 500 1 LYS A 55 -75.12 -75.75 REMARK 500 1 ASN A 56 91.53 65.05 REMARK 500 1 ARG A 58 128.48 -39.89 REMARK 500 1 ASP A 82 93.87 -62.97 REMARK 500 1 SER A 98 -53.32 -159.00 REMARK 500 1 SER A 107 -57.98 -178.91 REMARK 500 1 SER A 108 92.30 62.17 REMARK 500 2 SER A 2 -58.47 -160.69 REMARK 500 2 ARG A 15 164.16 -47.77 REMARK 500 2 ASN A 21 173.13 53.66 REMARK 500 2 ASP A 33 50.12 -106.67 REMARK 500 2 LYS A 55 -79.64 -71.49 REMARK 500 2 ASN A 56 101.34 53.62 REMARK 500 2 ARG A 57 -46.77 179.54 REMARK 500 2 ARG A 81 -32.21 -38.86 REMARK 500 2 ASP A 82 99.86 -57.83 REMARK 500 2 ARG A 100 132.18 -174.21 REMARK 500 2 THR A 102 127.16 62.69 REMARK 500 2 SER A 104 161.94 67.24 REMARK 500 3 SER A 2 173.28 178.82 REMARK 500 3 SER A 3 158.70 62.36 REMARK 500 3 SER A 5 -60.76 -158.33 REMARK 500 3 SER A 6 167.60 57.25 REMARK 500 3 ALA A 18 168.01 55.64 REMARK 500 3 ASN A 29 17.21 59.08 REMARK 500 3 ASP A 33 50.71 -107.06 REMARK 500 3 TYR A 46 -60.14 -99.80 REMARK 500 3 ARG A 57 96.87 175.82 REMARK 500 3 ARG A 58 173.16 168.09 REMARK 500 3 ARG A 81 -37.72 -38.74 REMARK 500 3 ASP A 82 98.46 -43.41 REMARK 500 3 SER A 107 174.48 61.14 REMARK 500 4 SER A 2 124.79 -172.54 REMARK 500 4 MET A 8 -55.87 -121.08 REMARK 500 4 SER A 9 95.95 64.14 REMARK 500 4 VAL A 13 87.11 50.40 REMARK 500 4 ASN A 21 97.52 66.16 REMARK 500 4 ASP A 33 32.20 -99.14 REMARK 500 4 ASP A 51 144.90 178.35 REMARK 500 4 ASN A 56 88.60 49.56 REMARK 500 4 ARG A 57 -57.52 177.48 REMARK 500 4 ARG A 81 -38.70 -38.69 REMARK 500 4 ASP A 82 90.66 -54.15 REMARK 500 4 ARG A 97 170.56 62.13 REMARK 500 REMARK 500 THIS ENTRY HAS 269 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSS001003882 RELATED DB: TARGETDB DBREF 1X4A A 8 103 UNP Q07955 SFRS1_HUMAN 33 128 SEQADV 1X4A GLY A 1 UNP Q07955 CLONING ARTIFACT SEQADV 1X4A SER A 2 UNP Q07955 CLONING ARTIFACT SEQADV 1X4A SER A 3 UNP Q07955 CLONING ARTIFACT SEQADV 1X4A GLY A 4 UNP Q07955 CLONING ARTIFACT SEQADV 1X4A SER A 5 UNP Q07955 CLONING ARTIFACT SEQADV 1X4A SER A 6 UNP Q07955 CLONING ARTIFACT SEQADV 1X4A GLY A 7 UNP Q07955 CLONING ARTIFACT SEQADV 1X4A SER A 104 UNP Q07955 CLONING ARTIFACT SEQADV 1X4A GLY A 105 UNP Q07955 CLONING ARTIFACT SEQADV 1X4A PRO A 106 UNP Q07955 CLONING ARTIFACT SEQADV 1X4A SER A 107 UNP Q07955 CLONING ARTIFACT SEQADV 1X4A SER A 108 UNP Q07955 CLONING ARTIFACT SEQADV 1X4A GLY A 109 UNP Q07955 CLONING ARTIFACT SEQRES 1 A 109 GLY SER SER GLY SER SER GLY MET SER GLY GLY GLY VAL SEQRES 2 A 109 ILE ARG GLY PRO ALA GLY ASN ASN ASP CYS ARG ILE TYR SEQRES 3 A 109 VAL GLY ASN LEU PRO PRO ASP ILE ARG THR LYS ASP ILE SEQRES 4 A 109 GLU ASP VAL PHE TYR LYS TYR GLY ALA ILE ARG ASP ILE SEQRES 5 A 109 ASP LEU LYS ASN ARG ARG GLY GLY PRO PRO PHE ALA PHE SEQRES 6 A 109 VAL GLU PHE GLU ASP PRO ARG ASP ALA GLU ASP ALA VAL SEQRES 7 A 109 TYR GLY ARG ASP GLY TYR ASP TYR ASP GLY TYR ARG LEU SEQRES 8 A 109 ARG VAL GLU PHE PRO ARG SER GLY ARG GLY THR GLY SER SEQRES 9 A 109 GLY PRO SER SER GLY HELIX 1 1 THR A 36 PHE A 43 1 8 HELIX 2 2 TYR A 44 TYR A 46 5 3 HELIX 3 3 PRO A 71 ARG A 81 1 11 SHEET 1 A 4 ARG A 24 GLY A 28 0 SHEET 2 A 4 ILE A 49 LEU A 54 -1 SHEET 3 A 4 ALA A 64 PHE A 68 -1 SHEET 4 A 4 ASP A 85 TYR A 86 -1 SHEET 1 B 2 TYR A 89 ARG A 90 0 SHEET 2 B 2 ARG A 92 GLU A 94 -1 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1