data_1X5T # _entry.id 1X5T # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1X5T pdb_00001x5t 10.2210/pdb1x5t/pdb RCSB RCSB024415 ? ? WWPDB D_1000024415 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hss001003928.2 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1X5T _pdbx_database_status.recvd_initial_deposition_date 2005-05-16 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sato, A.' 1 'Kuwasako, K.' 2 'Muto, Y.' 3 'Inoue, M.' 4 'Kigawa, T.' 5 'Shirouzu, M.' 6 'Terada, T.' 7 'Yokoyama, S.' 8 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 9 # _citation.id primary _citation.title 'Solution structure of the second RRM domain in splicing factor = 3B' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sato, A.' 1 ? primary 'Kuwasako, K.' 2 ? primary 'Muto, Y.' 3 ? primary 'Inoue, M.' 4 ? primary 'Kigawa, T.' 5 ? primary 'Shirouzu, M.' 6 ? primary 'Terada, T.' 7 ? primary 'Yokoyama, S.' 8 ? # _cell.entry_id 1X5T _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1X5T _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Splicing factor 3B subunit 4' _entity.formula_weight 10178.248 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'RRM domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Spliceosome associated protein 49, SAP 49, SF3b50, Pre-mRNA splicing factor SF3b 49 kDa subunit' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITV SYAFKKDSKGSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITV SYAFKKDSKGSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hss001003928.2 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 ILE n 1 9 PHE n 1 10 ILE n 1 11 GLY n 1 12 ASN n 1 13 LEU n 1 14 ASP n 1 15 PRO n 1 16 GLU n 1 17 ILE n 1 18 ASP n 1 19 GLU n 1 20 LYS n 1 21 LEU n 1 22 LEU n 1 23 TYR n 1 24 ASP n 1 25 THR n 1 26 PHE n 1 27 SER n 1 28 ALA n 1 29 PHE n 1 30 GLY n 1 31 VAL n 1 32 ILE n 1 33 LEU n 1 34 GLN n 1 35 THR n 1 36 PRO n 1 37 LYS n 1 38 ILE n 1 39 MET n 1 40 ARG n 1 41 ASP n 1 42 PRO n 1 43 ASP n 1 44 THR n 1 45 GLY n 1 46 ASN n 1 47 SER n 1 48 LYS n 1 49 GLY n 1 50 TYR n 1 51 ALA n 1 52 PHE n 1 53 ILE n 1 54 ASN n 1 55 PHE n 1 56 ALA n 1 57 SER n 1 58 PHE n 1 59 ASP n 1 60 ALA n 1 61 SER n 1 62 ASP n 1 63 ALA n 1 64 ALA n 1 65 ILE n 1 66 GLU n 1 67 ALA n 1 68 MET n 1 69 ASN n 1 70 GLY n 1 71 GLN n 1 72 TYR n 1 73 LEU n 1 74 CYS n 1 75 ASN n 1 76 ARG n 1 77 PRO n 1 78 ILE n 1 79 THR n 1 80 VAL n 1 81 SER n 1 82 TYR n 1 83 ALA n 1 84 PHE n 1 85 LYS n 1 86 LYS n 1 87 ASP n 1 88 SER n 1 89 LYS n 1 90 GLY n 1 91 SER n 1 92 GLY n 1 93 PRO n 1 94 SER n 1 95 SER n 1 96 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'SF3B4, SAP49' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P040517-06 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SF3B4_HUMAN _struct_ref.pdbx_db_accession Q15427 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKD SKG ; _struct_ref.pdbx_align_begin 102 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1X5T _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 90 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q15427 _struct_ref_seq.db_align_beg 102 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 184 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 90 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1X5T GLY A 1 ? UNP Q15427 ? ? 'cloning artifact' 1 1 1 1X5T SER A 2 ? UNP Q15427 ? ? 'cloning artifact' 2 2 1 1X5T SER A 3 ? UNP Q15427 ? ? 'cloning artifact' 3 3 1 1X5T GLY A 4 ? UNP Q15427 ? ? 'cloning artifact' 4 4 1 1X5T SER A 5 ? UNP Q15427 ? ? 'cloning artifact' 5 5 1 1X5T SER A 6 ? UNP Q15427 ? ? 'cloning artifact' 6 6 1 1X5T GLY A 7 ? UNP Q15427 ? ? 'cloning artifact' 7 7 1 1X5T SER A 91 ? UNP Q15427 ? ? 'cloning artifact' 91 8 1 1X5T GLY A 92 ? UNP Q15427 ? ? 'cloning artifact' 92 9 1 1X5T PRO A 93 ? UNP Q15427 ? ? 'cloning artifact' 93 10 1 1X5T SER A 94 ? UNP Q15427 ? ? 'cloning artifact' 94 11 1 1X5T SER A 95 ? UNP Q15427 ? ? 'cloning artifact' 95 12 1 1X5T GLY A 96 ? UNP Q15427 ? ? 'cloning artifact' 96 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.8mM U-15, 13C; 20mM phosphate buffer NA; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 1X5T _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1X5T _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function, structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1X5T _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 2.6 Bruker 1 processing NMRPipe 20031121 Delaglio,F. 2 'data analysis' NMRView 5.0.4 Johnson,B.A. 3 'data analysis' KUJIRA 0.925 Kobayashi,N. 4 'structure solution' CYANA 2.0.17 Guntert,P. 5 refinement CYANA 2.0.17 Guntert,P. 6 # _exptl.entry_id 1X5T _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1X5T _struct.title 'Solution structure of the second RRM domain in splicing factor = 3B' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1X5T _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text ;structure genomics, RRM domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, RNA BINDING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 19 ? SER A 27 ? GLU A 19 SER A 27 1 ? 9 HELX_P HELX_P2 2 SER A 57 ? ALA A 67 ? SER A 57 ALA A 67 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 37 ? ILE A 38 ? LYS A 37 ILE A 38 A 2 TYR A 50 ? ASN A 54 ? TYR A 50 ASN A 54 A 3 GLY A 7 ? GLY A 11 ? GLY A 7 GLY A 11 A 4 THR A 79 ? TYR A 82 ? THR A 79 TYR A 82 B 1 TYR A 72 ? LEU A 73 ? TYR A 72 LEU A 73 B 2 ARG A 76 ? PRO A 77 ? ARG A 76 PRO A 77 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 37 ? N LYS A 37 O PHE A 52 ? O PHE A 52 A 2 3 O ILE A 53 ? O ILE A 53 N ILE A 8 ? N ILE A 8 A 3 4 N PHE A 9 ? N PHE A 9 O SER A 81 ? O SER A 81 B 1 2 N LEU A 73 ? N LEU A 73 O ARG A 76 ? O ARG A 76 # _database_PDB_matrix.entry_id 1X5T _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1X5T _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 PHE 9 9 9 PHE PHE A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 PRO 15 15 15 PRO PRO A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 TYR 23 23 23 TYR TYR A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 PHE 26 26 26 PHE PHE A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 GLN 34 34 34 GLN GLN A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 PRO 36 36 36 PRO PRO A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 MET 39 39 39 MET MET A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 ASP 41 41 41 ASP ASP A . n A 1 42 PRO 42 42 42 PRO PRO A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 TYR 50 50 50 TYR TYR A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 PHE 52 52 52 PHE PHE A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 ASN 54 54 54 ASN ASN A . n A 1 55 PHE 55 55 55 PHE PHE A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 PHE 58 58 58 PHE PHE A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 SER 61 61 61 SER SER A . n A 1 62 ASP 62 62 62 ASP ASP A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 ILE 65 65 65 ILE ILE A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 MET 68 68 68 MET MET A . n A 1 69 ASN 69 69 69 ASN ASN A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 GLN 71 71 71 GLN GLN A . n A 1 72 TYR 72 72 72 TYR TYR A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 CYS 74 74 74 CYS CYS A . n A 1 75 ASN 75 75 75 ASN ASN A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 TYR 82 82 82 TYR TYR A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 PHE 84 84 84 PHE PHE A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 LYS 86 86 86 LYS LYS A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 PRO 93 93 93 PRO PRO A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 GLY 96 96 96 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-16 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 2 ? ? -172.80 137.82 2 1 THR A 25 ? ? -39.97 -36.81 3 1 THR A 35 ? ? -38.39 132.34 4 1 ASP A 43 ? ? -96.78 -71.99 5 1 SER A 47 ? ? -174.82 121.14 6 1 ASN A 69 ? ? -64.04 84.04 7 1 GLN A 71 ? ? -35.46 119.77 8 1 CYS A 74 ? ? -32.19 91.09 9 1 ASN A 75 ? ? 39.39 47.57 10 1 ARG A 76 ? ? -170.43 109.83 11 1 TYR A 82 ? ? -38.16 122.98 12 2 ASN A 12 ? ? 74.10 49.69 13 2 THR A 25 ? ? -37.54 -38.48 14 2 PHE A 29 ? ? -57.51 -70.60 15 2 THR A 35 ? ? -35.42 138.97 16 2 PRO A 42 ? ? -69.76 1.67 17 2 ASN A 46 ? ? -43.30 104.26 18 2 SER A 47 ? ? -35.64 122.87 19 2 ALA A 67 ? ? -93.10 -60.12 20 2 ASN A 69 ? ? -69.18 86.93 21 2 CYS A 74 ? ? -33.69 90.90 22 2 ARG A 76 ? ? -170.32 106.03 23 2 TYR A 82 ? ? -45.71 108.14 24 2 LYS A 85 ? ? -171.68 123.21 25 2 SER A 94 ? ? 34.45 49.54 26 3 PRO A 15 ? ? -69.75 0.50 27 3 LEU A 21 ? ? -48.28 -70.17 28 3 THR A 35 ? ? -37.05 133.41 29 3 SER A 47 ? ? -48.03 105.48 30 3 ASN A 69 ? ? -65.99 81.47 31 3 CYS A 74 ? ? -33.17 90.87 32 3 ARG A 76 ? ? -170.42 105.58 33 3 ASP A 87 ? ? -172.41 134.29 34 4 THR A 35 ? ? -39.72 135.19 35 4 ASP A 43 ? ? -100.37 -64.36 36 4 ASN A 69 ? ? -63.98 73.91 37 4 GLN A 71 ? ? -34.06 127.90 38 4 CYS A 74 ? ? -32.16 90.96 39 4 ASN A 75 ? ? 39.35 47.15 40 4 ARG A 76 ? ? -170.60 112.81 41 4 TYR A 82 ? ? -35.79 127.42 42 4 LYS A 86 ? ? -112.82 56.34 43 5 THR A 35 ? ? -36.52 136.67 44 5 THR A 44 ? ? -77.08 -74.49 45 5 SER A 47 ? ? -47.60 107.32 46 5 ALA A 67 ? ? -96.59 -60.66 47 5 ASN A 69 ? ? -56.69 96.54 48 5 CYS A 74 ? ? -31.71 90.39 49 5 ASN A 75 ? ? 39.81 48.08 50 5 ARG A 76 ? ? -170.93 106.66 51 5 PRO A 77 ? ? -69.79 99.56 52 5 TYR A 82 ? ? -51.27 100.70 53 5 ALA A 83 ? ? -38.15 131.62 54 6 THR A 35 ? ? -39.95 132.56 55 6 ASN A 69 ? ? -60.48 83.37 56 6 GLN A 71 ? ? -39.33 122.03 57 6 CYS A 74 ? ? -32.65 91.34 58 6 ARG A 76 ? ? -170.11 109.33 59 6 LYS A 85 ? ? -39.27 119.20 60 6 SER A 88 ? ? -126.70 -56.20 61 7 SER A 2 ? ? -55.74 -178.01 62 7 SER A 5 ? ? -108.02 57.40 63 7 ASN A 12 ? ? 74.12 54.97 64 7 THR A 25 ? ? -37.94 -36.55 65 7 THR A 35 ? ? -36.48 131.26 66 7 MET A 39 ? ? -67.54 96.46 67 7 ARG A 40 ? ? -67.95 -75.69 68 7 ASP A 43 ? ? -127.29 -75.28 69 7 ASN A 46 ? ? -97.96 -72.15 70 7 SER A 47 ? ? -173.97 121.47 71 7 ILE A 65 ? ? -49.06 -19.73 72 7 ALA A 67 ? ? -103.19 -61.05 73 7 ASN A 69 ? ? -59.79 87.18 74 7 GLN A 71 ? ? -38.97 122.07 75 7 CYS A 74 ? ? -30.28 91.08 76 7 ASN A 75 ? ? 37.94 49.30 77 7 ARG A 76 ? ? -170.64 110.65 78 8 SER A 2 ? ? -51.86 -73.57 79 8 THR A 35 ? ? -34.26 133.27 80 8 PRO A 42 ? ? -69.76 2.72 81 8 ASN A 69 ? ? -57.65 79.69 82 8 CYS A 74 ? ? -30.94 90.57 83 8 ASN A 75 ? ? 39.07 49.34 84 8 ARG A 76 ? ? -171.26 106.78 85 8 ALA A 83 ? ? -36.45 96.24 86 9 SER A 3 ? ? -39.07 128.13 87 9 SER A 6 ? ? -48.19 99.97 88 9 ASN A 12 ? ? 72.04 49.24 89 9 THR A 35 ? ? -35.39 136.34 90 9 PRO A 42 ? ? -69.77 3.36 91 9 ASP A 43 ? ? -115.63 -73.36 92 9 SER A 47 ? ? -173.34 147.97 93 9 ASN A 69 ? ? -58.41 78.57 94 9 GLN A 71 ? ? -35.46 134.99 95 9 CYS A 74 ? ? -28.21 91.23 96 9 ASN A 75 ? ? 35.18 50.05 97 9 ARG A 76 ? ? -171.08 112.19 98 10 ASN A 12 ? ? 71.25 47.09 99 10 PRO A 15 ? ? -69.80 1.93 100 10 THR A 25 ? ? -36.99 -35.57 101 10 THR A 35 ? ? -36.01 131.90 102 10 ASP A 43 ? ? -90.84 -63.19 103 10 SER A 47 ? ? -58.99 103.67 104 10 ALA A 64 ? ? -58.64 -72.19 105 10 ILE A 65 ? ? -39.84 -26.50 106 10 ASN A 69 ? ? -58.27 88.13 107 10 GLN A 71 ? ? -34.19 121.50 108 10 CYS A 74 ? ? -33.09 90.74 109 10 ARG A 76 ? ? -169.79 111.07 110 11 ASN A 12 ? ? 71.38 50.67 111 11 THR A 25 ? ? -39.61 -32.41 112 11 SER A 27 ? ? -39.71 -29.91 113 11 THR A 35 ? ? -39.44 137.66 114 11 ASP A 41 ? ? -50.31 109.07 115 11 ASP A 43 ? ? -95.94 -70.93 116 11 SER A 47 ? ? -38.62 106.62 117 11 ILE A 65 ? ? -48.00 -19.28 118 11 ASN A 69 ? ? -51.50 96.98 119 11 GLN A 71 ? ? -34.96 140.68 120 11 CYS A 74 ? ? -29.52 91.76 121 11 ASN A 75 ? ? 35.92 48.19 122 11 ARG A 76 ? ? -171.79 105.88 123 11 LYS A 85 ? ? -36.36 -32.47 124 11 SER A 91 ? ? -131.44 -34.74 125 12 ASN A 12 ? ? 73.91 47.59 126 12 THR A 25 ? ? -39.19 -36.74 127 12 THR A 35 ? ? -35.08 137.76 128 12 ILE A 65 ? ? -49.11 -19.52 129 12 ALA A 67 ? ? -105.15 -61.00 130 12 ASN A 69 ? ? -61.63 75.28 131 12 GLN A 71 ? ? -38.21 130.42 132 12 CYS A 74 ? ? -29.87 91.24 133 12 ASN A 75 ? ? 36.93 49.16 134 12 ARG A 76 ? ? -170.94 109.94 135 12 SER A 91 ? ? -171.72 135.21 136 13 SER A 5 ? ? -104.20 44.56 137 13 SER A 6 ? ? -91.91 43.06 138 13 ASN A 12 ? ? 74.46 54.05 139 13 THR A 25 ? ? -38.51 -38.80 140 13 THR A 35 ? ? -36.78 133.11 141 13 ASP A 41 ? ? -47.11 109.42 142 13 ALA A 67 ? ? -96.58 -60.81 143 13 ASN A 69 ? ? -56.88 82.03 144 13 CYS A 74 ? ? -30.61 90.28 145 13 ASN A 75 ? ? 38.87 49.35 146 13 ARG A 76 ? ? -171.14 107.29 147 13 PRO A 77 ? ? -69.80 99.21 148 13 PHE A 84 ? ? -39.68 114.98 149 14 SER A 2 ? ? -60.51 89.98 150 14 THR A 35 ? ? -36.04 133.32 151 14 SER A 47 ? ? -44.57 106.32 152 14 ALA A 67 ? ? -101.95 -60.37 153 14 ASN A 69 ? ? -63.82 74.06 154 14 CYS A 74 ? ? -28.67 91.41 155 14 ASN A 75 ? ? 35.58 49.70 156 14 ARG A 76 ? ? -171.40 112.75 157 15 ASN A 12 ? ? 72.55 35.03 158 15 THR A 35 ? ? -38.06 135.48 159 15 ASP A 41 ? ? -35.29 100.71 160 15 ILE A 65 ? ? -47.60 -19.80 161 15 ALA A 67 ? ? -101.88 -60.34 162 15 ASN A 69 ? ? -59.13 102.70 163 15 CYS A 74 ? ? -31.36 91.85 164 15 ASN A 75 ? ? 38.29 46.51 165 15 ARG A 76 ? ? -171.35 109.68 166 15 ALA A 83 ? ? -51.40 89.35 167 15 LYS A 85 ? ? -128.29 -74.27 168 15 SER A 94 ? ? -48.94 99.07 169 16 SER A 3 ? ? -128.10 -62.95 170 16 ASN A 12 ? ? 74.96 54.52 171 16 SER A 27 ? ? -34.35 -39.61 172 16 THR A 35 ? ? -33.52 137.17 173 16 PRO A 42 ? ? -69.76 0.96 174 16 ASN A 46 ? ? -134.80 -63.02 175 16 SER A 47 ? ? -172.61 105.43 176 16 ILE A 65 ? ? -49.10 -19.98 177 16 ALA A 67 ? ? -98.96 -61.15 178 16 ASN A 69 ? ? -55.12 91.39 179 16 GLN A 71 ? ? -33.59 132.30 180 16 CYS A 74 ? ? -27.65 92.07 181 16 ASN A 75 ? ? 35.83 50.55 182 16 ARG A 76 ? ? -172.46 112.10 183 16 SER A 88 ? ? -61.88 93.86 184 17 SER A 2 ? ? -88.98 40.90 185 17 SER A 5 ? ? -85.56 48.68 186 17 ASN A 12 ? ? 72.63 45.44 187 17 THR A 35 ? ? -39.64 134.61 188 17 ALA A 67 ? ? -98.57 -61.20 189 17 ASN A 69 ? ? -63.80 86.37 190 17 CYS A 74 ? ? -26.52 89.94 191 17 ASN A 75 ? ? 35.52 52.21 192 17 ARG A 76 ? ? -171.09 109.46 193 17 PRO A 77 ? ? -69.77 95.63 194 17 TYR A 82 ? ? -58.66 107.93 195 17 LYS A 86 ? ? -62.17 84.15 196 17 ASP A 87 ? ? -106.86 42.15 197 17 SER A 91 ? ? -129.97 -56.07 198 17 PRO A 93 ? ? -69.75 95.06 199 17 SER A 94 ? ? -38.55 109.52 200 17 SER A 95 ? ? -42.64 165.64 201 18 ASN A 12 ? ? 71.40 45.27 202 18 LEU A 21 ? ? -51.08 -70.31 203 18 THR A 35 ? ? -37.29 138.30 204 18 ASN A 69 ? ? -61.08 84.82 205 18 GLN A 71 ? ? -38.17 125.86 206 18 CYS A 74 ? ? -26.00 90.61 207 18 ASN A 75 ? ? 39.24 52.83 208 18 ARG A 76 ? ? -175.02 109.88 209 19 SER A 2 ? ? -44.63 -70.74 210 19 ASN A 12 ? ? 73.66 54.98 211 19 THR A 35 ? ? -37.71 131.80 212 19 ASP A 41 ? ? -38.17 117.12 213 19 ALA A 67 ? ? -104.83 -60.76 214 19 ASN A 69 ? ? -66.65 76.47 215 19 CYS A 74 ? ? -27.00 90.69 216 19 ASN A 75 ? ? 34.63 50.59 217 19 ARG A 76 ? ? -172.46 109.54 218 19 TYR A 82 ? ? -50.01 108.44 219 19 LYS A 86 ? ? -63.40 94.55 220 19 LYS A 89 ? ? -66.10 99.51 221 19 SER A 94 ? ? 39.75 35.97 222 20 SER A 3 ? ? 37.39 40.01 223 20 ASN A 12 ? ? 71.62 53.37 224 20 PRO A 15 ? ? -69.73 0.64 225 20 THR A 35 ? ? -39.31 136.06 226 20 ALA A 67 ? ? -99.66 -60.12 227 20 ASN A 69 ? ? -66.40 77.32 228 20 CYS A 74 ? ? -31.00 90.83 229 20 ASN A 75 ? ? 38.98 48.98 230 20 ARG A 76 ? ? -170.38 108.62 231 20 PRO A 77 ? ? -69.71 97.89 232 20 ASP A 87 ? ? -44.23 161.06 233 20 PRO A 93 ? ? -69.78 -179.72 234 20 SER A 95 ? ? 38.49 42.23 #