HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 16-AUG-04 1X7V TITLE CRYSTAL STRUCTURE OF PA3566 FROM PSEUDOMONAS AERUGINOSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PA3566 PROTEIN; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: APC5058; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) STAR; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, MIDWEST KEYWDS 2 CENTER FOR STRUCTURAL GENOMICS, ALPHA-BETA PLAIT, PSI, MCSG, KEYWDS 3 UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR D.A.SANDERS,J.R.WALKER,T.SKARINA,E.GORODICHTCHENSKAIA, AUTHOR 2 A.JOACHIMIAK,A.EDWARDS,A.SAVCHENKO,MIDWEST CENTER FOR AUTHOR 3 STRUCTURAL GENOMICS (MCSG) REVDAT 4 24-FEB-09 1X7V 1 VERSN REVDAT 3 14-MAR-06 1X7V 1 JRNL REMARK REVDAT 2 18-JAN-05 1X7V 1 AUTHOR KEYWDS REMARK REVDAT 1 31-AUG-04 1X7V 0 JRNL AUTH D.A.SANDERS,J.R.WALKER,T.SKARINA,A.SAVCHENKO JRNL TITL THE X-RAY CRYSTAL STRUCTURE OF PA3566 FROM JRNL TITL 2 PSEUDOMONAS AUREGINOSA AT 1.8 A RESOLUTION. JRNL REF PROTEINS V. 61 209 2005 JRNL REFN ISSN 0887-3585 JRNL PMID 16049913 JRNL DOI 10.1002/PROT.20503 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 63.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 23288 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1256 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.78 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.83 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1270 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 71.57 REMARK 3 BIN R VALUE (WORKING SET) : 0.1950 REMARK 3 BIN FREE R VALUE SET COUNT : 69 REMARK 3 BIN FREE R VALUE : 0.3260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2392 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 196 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.59000 REMARK 3 B22 (A**2) : 1.06000 REMARK 3 B33 (A**2) : -1.64000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.381 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.136 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.089 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.152 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2428 ; 0.019 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2179 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3289 ; 1.661 ; 1.939 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5022 ; 0.832 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 290 ; 6.324 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 137 ;33.940 ;23.066 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 404 ;13.652 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;15.430 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 358 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2735 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 525 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 430 ; 0.214 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2031 ; 0.193 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1102 ; 0.173 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1517 ; 0.086 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 120 ; 0.153 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 21 ; 0.205 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 115 ; 0.234 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 27 ; 0.123 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1795 ; 1.765 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 591 ; 0.551 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2326 ; 2.174 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1052 ; 3.317 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 963 ; 4.728 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5360 ; 1.771 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 195 ; 8.687 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 4558 ; 2.778 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 1X7V COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-04. REMARK 100 THE RCSB ID CODE IS RCSB030049. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-04 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96498, 0.97872, 0.98024 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-2 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : CCP4 (TRUNCATE) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25374 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.37800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, SODIUM CITRATE, REMARK 280 PH 5.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 52.27750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 19.19750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 52.27750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 19.19750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6, 7 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 7 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -63.72000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 GLY B -1 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 HIS A 0 REMARK 475 MSE A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 HIS A 0 CA - CB - CG ANGL. DEV. = 11.6 DEGREES REMARK 500 ARG A 23 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 23 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE C 77 27.01 -73.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 103 DISTANCE = 10.49 ANGSTROMS REMARK 525 HOH B 107 DISTANCE = 11.80 ANGSTROMS REMARK 525 HOH B 108 DISTANCE = 7.73 ANGSTROMS REMARK 525 HOH B 109 DISTANCE = 14.86 ANGSTROMS REMARK 525 HOH B 110 DISTANCE = 12.51 ANGSTROMS REMARK 525 HOH B 114 DISTANCE = 10.56 ANGSTROMS REMARK 525 HOH B 117 DISTANCE = 7.04 ANGSTROMS REMARK 525 HOH B 121 DISTANCE = 8.72 ANGSTROMS REMARK 525 HOH B 123 DISTANCE = 9.81 ANGSTROMS REMARK 525 HOH B 125 DISTANCE = 13.21 ANGSTROMS REMARK 525 HOH B 130 DISTANCE = 15.12 ANGSTROMS REMARK 525 HOH B 131 DISTANCE = 5.07 ANGSTROMS REMARK 525 HOH B 137 DISTANCE = 26.51 ANGSTROMS REMARK 525 HOH B 141 DISTANCE = 24.79 ANGSTROMS REMARK 525 HOH B 142 DISTANCE = 8.49 ANGSTROMS REMARK 525 HOH B 146 DISTANCE = 10.94 ANGSTROMS REMARK 525 HOH B 151 DISTANCE = 8.32 ANGSTROMS REMARK 525 HOH B 158 DISTANCE = 31.11 ANGSTROMS REMARK 525 HOH B 182 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH B 192 DISTANCE = 31.82 ANGSTROMS REMARK 525 HOH B 193 DISTANCE = 13.79 ANGSTROMS REMARK 525 HOH B 196 DISTANCE = 7.28 ANGSTROMS REMARK 525 HOH B 197 DISTANCE = 10.14 ANGSTROMS REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 HOH A 127 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC5058 RELATED DB: TARGETDB DBREF 1X7V A 1 97 UNP Q9HY51 Q9HY51_PSEAE 1 97 DBREF 1X7V B 1 97 UNP Q9HY51 Q9HY51_PSEAE 1 97 DBREF 1X7V C 1 97 UNP Q9HY51 Q9HY51_PSEAE 1 97 SEQADV 1X7V GLY A -1 UNP Q9HY51 CLONING ARTIFACT SEQADV 1X7V HIS A 0 UNP Q9HY51 CLONING ARTIFACT SEQADV 1X7V MSE A 1 UNP Q9HY51 MET 1 MODIFIED RESIDUE SEQADV 1X7V MSE A 55 UNP Q9HY51 MET 55 MODIFIED RESIDUE SEQADV 1X7V GLY B -1 UNP Q9HY51 CLONING ARTIFACT SEQADV 1X7V HIS B 0 UNP Q9HY51 CLONING ARTIFACT SEQADV 1X7V MSE B 1 UNP Q9HY51 MET 1 MODIFIED RESIDUE SEQADV 1X7V MSE B 55 UNP Q9HY51 MET 55 MODIFIED RESIDUE SEQADV 1X7V GLY C -1 UNP Q9HY51 CLONING ARTIFACT SEQADV 1X7V HIS C 0 UNP Q9HY51 CLONING ARTIFACT SEQADV 1X7V MSE C 1 UNP Q9HY51 MET 1 MODIFIED RESIDUE SEQADV 1X7V MSE C 55 UNP Q9HY51 MET 55 MODIFIED RESIDUE SEQRES 1 A 99 GLY HIS MSE SER THR PRO LEU THR LEU ILE ALA THR ILE SEQRES 2 A 99 THR ALA ALA PRO GLY HIS ALA GLU ALA LEU GLU ARG GLU SEQRES 3 A 99 LEU ARG ALA LEU VAL ALA PRO SER ARG ALA GLU ALA GLY SEQRES 4 A 99 CYS LEU GLN TYR ASP LEU HIS GLN ASP ARG HIS ASP SER SEQRES 5 A 99 HIS LEU PHE TYR MSE ILE GLU GLN TRP ARG ASP ASP ALA SEQRES 6 A 99 ALA LEU GLU ARG HIS GLN ASN THR GLU HIS PHE LEU ARG SEQRES 7 A 99 PHE SER ARG GLY ASN GLU ALA LEU LEU GLN ASN VAL LYS SEQRES 8 A 99 ILE ASP GLN LEU TYR ARG LEU ALA SEQRES 1 B 99 GLY HIS MSE SER THR PRO LEU THR LEU ILE ALA THR ILE SEQRES 2 B 99 THR ALA ALA PRO GLY HIS ALA GLU ALA LEU GLU ARG GLU SEQRES 3 B 99 LEU ARG ALA LEU VAL ALA PRO SER ARG ALA GLU ALA GLY SEQRES 4 B 99 CYS LEU GLN TYR ASP LEU HIS GLN ASP ARG HIS ASP SER SEQRES 5 B 99 HIS LEU PHE TYR MSE ILE GLU GLN TRP ARG ASP ASP ALA SEQRES 6 B 99 ALA LEU GLU ARG HIS GLN ASN THR GLU HIS PHE LEU ARG SEQRES 7 B 99 PHE SER ARG GLY ASN GLU ALA LEU LEU GLN ASN VAL LYS SEQRES 8 B 99 ILE ASP GLN LEU TYR ARG LEU ALA SEQRES 1 C 99 GLY HIS MSE SER THR PRO LEU THR LEU ILE ALA THR ILE SEQRES 2 C 99 THR ALA ALA PRO GLY HIS ALA GLU ALA LEU GLU ARG GLU SEQRES 3 C 99 LEU ARG ALA LEU VAL ALA PRO SER ARG ALA GLU ALA GLY SEQRES 4 C 99 CYS LEU GLN TYR ASP LEU HIS GLN ASP ARG HIS ASP SER SEQRES 5 C 99 HIS LEU PHE TYR MSE ILE GLU GLN TRP ARG ASP ASP ALA SEQRES 6 C 99 ALA LEU GLU ARG HIS GLN ASN THR GLU HIS PHE LEU ARG SEQRES 7 C 99 PHE SER ARG GLY ASN GLU ALA LEU LEU GLN ASN VAL LYS SEQRES 8 C 99 ILE ASP GLN LEU TYR ARG LEU ALA MODRES 1X7V MSE A 1 MET SELENOMETHIONINE MODRES 1X7V MSE A 55 MET SELENOMETHIONINE MODRES 1X7V MSE B 1 MET SELENOMETHIONINE MODRES 1X7V MSE B 55 MET SELENOMETHIONINE MODRES 1X7V MSE C 1 MET SELENOMETHIONINE MODRES 1X7V MSE C 55 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 55 8 HET MSE B 1 8 HET MSE B 55 8 HET MSE C 1 8 HET MSE C 55 8 HET SO4 C 301 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 4 SO4 O4 S 2- FORMUL 5 HOH *196(H2 O) HELIX 1 1 HIS A 17 ALA A 27 1 11 HELIX 2 2 LEU A 28 GLU A 35 1 8 HELIX 3 3 ASP A 61 ASN A 70 1 10 HELIX 4 4 THR A 71 ARG A 79 1 9 HELIX 5 5 ASN A 81 ALA A 83 5 3 HELIX 6 6 HIS B 17 ALA B 34 1 18 HELIX 7 7 ASP B 61 ASN B 70 1 10 HELIX 8 8 THR B 71 ARG B 79 1 9 HELIX 9 9 ASN B 81 ALA B 83 5 3 HELIX 10 10 HIS C 17 ALA C 27 1 11 HELIX 11 11 LEU C 28 GLU C 35 1 8 HELIX 12 12 ASP C 61 GLN C 69 1 9 HELIX 13 13 THR C 71 PHE C 77 1 7 SHEET 1 A 8 CYS A 38 GLN A 45 0 SHEET 2 A 8 LEU A 52 TRP A 59 -1 O ILE A 56 N ASP A 42 SHEET 3 A 8 LEU A 5 ALA A 13 -1 N LEU A 7 O GLU A 57 SHEET 4 A 8 LEU A 85 TYR A 94 -1 O LEU A 93 N THR A 6 SHEET 5 A 8 LEU B 85 TYR B 94 -1 O ILE B 90 N GLN A 86 SHEET 6 A 8 LEU B 5 ALA B 13 -1 N THR B 12 O GLN B 86 SHEET 7 A 8 LEU B 52 TRP B 59 -1 O GLU B 57 N LEU B 7 SHEET 8 A 8 CYS B 38 GLN B 45 -1 N ASP B 42 O ILE B 56 SHEET 1 B 4 CYS C 38 GLN C 45 0 SHEET 2 B 4 LEU C 52 TRP C 59 -1 O ILE C 56 N ASP C 42 SHEET 3 B 4 LEU C 5 ALA C 13 -1 N LEU C 7 O GLU C 57 SHEET 4 B 4 LEU C 85 TYR C 94 -1 O LYS C 89 N THR C 10 LINK C HIS A 0 N MSE A 1 1555 1555 1.34 LINK O HIS A 0 CG MSE A 1 1555 1555 1.78 LINK C MSE A 1 N SER A 2 1555 1555 1.37 LINK C TYR A 54 N MSE A 55 1555 1555 1.35 LINK C MSE A 55 N ILE A 56 1555 1555 1.32 LINK C HIS B 0 N MSE B 1 1555 1555 1.34 LINK C MSE B 1 N SER B 2 1555 1555 1.33 LINK C TYR B 54 N MSE B 55 1555 1555 1.34 LINK C MSE B 55 N ILE B 56 1555 1555 1.34 LINK C HIS C 0 N MSE C 1 1555 1555 1.32 LINK C MSE C 1 N SER C 2 1555 1555 1.33 LINK C TYR C 54 N MSE C 55 1555 1555 1.32 LINK C MSE C 55 N ILE C 56 1555 1555 1.31 SITE 1 AC1 7 ALA A 36 GLY A 37 ARG A 60 HOH B 117 SITE 2 AC1 7 ARG C 60 ALA C 64 ARG C 67 CRYST1 104.555 38.395 63.720 90.00 90.00 90.00 P 21 21 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009564 0.000000 0.000000 0.00000 SCALE2 0.000000 0.026045 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015694 0.00000