HEADER TRANSFERASE 24-AUG-04 1X9X TITLE SOLUTION STRUCTURE OF DIMERIC SAM DOMAIN FROM MAPKKK STE11 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE STE11; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: SAM DOMAIN (RESIDUES 37-104); COMPND 5 EC: 2.7.1.37; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: STE11; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET14B KEYWDS SAM DOMAIN, MAP KINASE, STE11, TRANSFERASE EXPDTA SOLUTION NMR NUMMDL 8 AUTHOR S.BHATTACHARJYA,P.XU,R.GINGRAS,R.SHAYKHUTDINOV,C.WU,M.WHITEWAY,F.NI REVDAT 3 02-MAR-22 1X9X 1 REMARK REVDAT 2 24-FEB-09 1X9X 1 VERSN REVDAT 1 30-AUG-05 1X9X 0 JRNL AUTH S.BHATTACHARJYA,P.XU,R.GINGRAS,R.SHAYKHUTDINOV,C.WU, JRNL AUTH 2 M.WHITEWAY,F.NI JRNL TITL SOLUTION STRUCTURE OF THE DIMERIC SAM DOMAIN OF MAPKKK STE11 JRNL TITL 2 AND ITS INTERACTIONS WITH THE ADAPTOR PROTEIN STE50 FROM THE JRNL TITL 3 BUDDING YEAST: IMPLICATIONS FOR STE11 ACTIVATION AND SIGNAL JRNL TITL 4 TRANSMISSION THROUGH THE STE50-STE11 COMPLEX. JRNL REF J.MOL.BIOL. V. 344 1071 2004 JRNL REFN ISSN 0022-2836 JRNL PMID 15544813 JRNL DOI 10.1016/J.JMB.2004.09.018 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 1.0.6, CYANA 1.0.6 REMARK 3 AUTHORS : GUENTERT (CYANA), GUENTERT (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: TOTAL DISTANT CONSTRAINTS USED, 1, 140, REMARK 3 INTER-SUBNUINT NOE: 40, INTRA-SUBUNIT NOE:1134, DIHEDRAL ANGLE:60 REMARK 4 REMARK 4 1X9X COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-AUG-04. REMARK 100 THE DEPOSITION ID IS D_1000030123. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 288 REMARK 210 PH : 5.8 REMARK 210 IONIC STRENGTH : 300 MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.8 MM STE11 SAM, U-15N, 13C, REMARK 210 10MM PHOSPHATE BUFFER, 300 MM REMARK 210 NACL, 90% H2O, 10% D2O; 0.8MM REMARK 210 STE11 SAM U-15N, 13C MIXED WITH REMARK 210 UNLABELLED STE11 SAM, 90% H2O, REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; FILTERED REMARK 210 NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : DISTANT GEOMETRY REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 8 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: STRUCTURE HAS BEEN DETERMINED BY 3-D NMR REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-8 REMARK 465 RES C SSSEQI REMARK 465 ASP A 1 REMARK 465 GLU A 2 REMARK 465 LYS A 3 REMARK 465 THR A 4 REMARK 465 ASN A 5 REMARK 465 ASP A 6 REMARK 465 ASP B 84 REMARK 465 GLU B 85 REMARK 465 LYS B 86 REMARK 465 THR B 87 REMARK 465 ASN B 88 REMARK 465 ASP B 89 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O VAL A 10 H LEU A 14 1.45 REMARK 500 O GLY B 137 H LEU B 140 1.48 REMARK 500 O PHE B 109 H ASN B 113 1.48 REMARK 500 O PHE A 26 H ASN A 30 1.50 REMARK 500 O ILE B 142 H SER B 146 1.53 REMARK 500 O GLY A 54 H LEU A 57 1.54 REMARK 500 O TYR A 22 H PHE A 26 1.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PHE A 9 40.72 -150.53 REMARK 500 1 ASN A 30 61.89 100.36 REMARK 500 1 GLU A 34 35.14 -87.35 REMARK 500 1 GLU A 35 -44.08 -147.43 REMARK 500 1 LYS A 52 99.17 -48.28 REMARK 500 1 ASP A 55 -31.18 -37.67 REMARK 500 1 SER A 65 -17.23 -49.41 REMARK 500 1 PHE B 92 82.19 -155.27 REMARK 500 1 CYS B 102 45.54 -142.12 REMARK 500 1 ASN B 113 65.79 97.61 REMARK 500 1 GLU B 118 -44.48 -136.85 REMARK 500 1 VAL B 133 77.72 -119.73 REMARK 500 1 LYS B 135 90.87 -46.90 REMARK 500 1 ASP B 138 -34.40 -37.35 REMARK 500 2 PHE A 9 115.51 -160.21 REMARK 500 2 CYS A 19 37.95 -153.80 REMARK 500 2 ASN A 30 53.90 98.55 REMARK 500 2 GLU A 34 34.02 -91.29 REMARK 500 2 GLU A 35 -44.96 -148.13 REMARK 500 2 LYS A 52 98.70 -51.78 REMARK 500 2 ASP A 55 -30.51 -37.28 REMARK 500 2 GLN A 67 -81.64 -118.51 REMARK 500 2 PHE B 92 52.18 -149.43 REMARK 500 2 CYS B 102 40.71 -143.41 REMARK 500 2 ASN B 113 45.21 99.46 REMARK 500 2 GLU B 117 31.21 -89.89 REMARK 500 2 GLU B 118 -45.82 -139.25 REMARK 500 2 ASP B 124 -168.25 -122.38 REMARK 500 2 LYS B 135 91.68 -46.51 REMARK 500 2 SER B 148 -19.24 -46.62 REMARK 500 3 CYS A 19 32.72 -153.37 REMARK 500 3 ASN A 30 56.36 101.36 REMARK 500 3 GLU A 35 -44.42 -132.27 REMARK 500 3 ASP A 41 -160.21 -100.32 REMARK 500 3 LYS A 52 102.06 -51.30 REMARK 500 3 ASP A 55 -32.70 -35.24 REMARK 500 3 PRO B 91 -89.75 -74.87 REMARK 500 3 ASN B 113 63.83 96.52 REMARK 500 3 VAL B 115 51.08 -109.32 REMARK 500 3 GLU B 117 36.61 34.10 REMARK 500 3 GLU B 118 -44.78 -155.70 REMARK 500 3 LYS B 135 97.32 -54.68 REMARK 500 3 ASP B 138 -34.95 -36.59 REMARK 500 3 GLN B 150 -93.54 -37.26 REMARK 500 4 PHE A 9 59.92 -147.79 REMARK 500 4 CYS A 19 36.27 -146.65 REMARK 500 4 ASN A 30 55.19 95.09 REMARK 500 4 VAL A 32 37.97 -94.28 REMARK 500 4 GLU A 35 -46.86 -131.05 REMARK 500 4 LYS A 52 98.03 -48.75 REMARK 500 REMARK 500 THIS ENTRY HAS 125 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5933 RELATED DB: BMRB REMARK 900 CHEMICAL SHIFTS DBREF 1X9X A 1 68 UNP P23561 STE11_YEAST 37 104 DBREF 1X9X B 84 151 UNP P23561 STE11_YEAST 37 104 SEQRES 1 A 68 ASP GLU LYS THR ASN ASP LEU PRO PHE VAL GLN LEU PHE SEQRES 2 A 68 LEU GLU GLU ILE GLY CYS THR GLN TYR LEU ASP SER PHE SEQRES 3 A 68 ILE GLN CYS ASN LEU VAL THR GLU GLU GLU ILE LYS TYR SEQRES 4 A 68 LEU ASP LYS ASP ILE LEU ILE ALA LEU GLY VAL ASN LYS SEQRES 5 A 68 ILE GLY ASP ARG LEU LYS ILE LEU ARG LYS SER LYS SER SEQRES 6 A 68 PHE GLN ARG SEQRES 1 B 68 ASP GLU LYS THR ASN ASP LEU PRO PHE VAL GLN LEU PHE SEQRES 2 B 68 LEU GLU GLU ILE GLY CYS THR GLN TYR LEU ASP SER PHE SEQRES 3 B 68 ILE GLN CYS ASN LEU VAL THR GLU GLU GLU ILE LYS TYR SEQRES 4 B 68 LEU ASP LYS ASP ILE LEU ILE ALA LEU GLY VAL ASN LYS SEQRES 5 B 68 ILE GLY ASP ARG LEU LYS ILE LEU ARG LYS SER LYS SER SEQRES 6 B 68 PHE GLN ARG HELIX 1 1 PHE A 9 GLY A 18 1 10 HELIX 2 2 CYS A 19 GLN A 21 5 3 HELIX 3 3 TYR A 22 ASN A 30 1 9 HELIX 4 4 GLU A 35 LEU A 40 5 6 HELIX 5 5 ASP A 41 GLY A 49 1 9 HELIX 6 6 GLY A 54 SER A 65 1 12 HELIX 7 7 PHE B 92 GLU B 98 1 7 HELIX 8 8 CYS B 102 GLN B 104 5 3 HELIX 9 9 TYR B 105 ASN B 113 1 9 HELIX 10 10 LYS B 125 GLY B 132 1 8 HELIX 11 11 GLY B 137 SER B 148 1 12 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1