HEADER TRANSPORT PROTEIN 26-AUG-04 1XAQ OBSLTE 21-MAR-06 1XAQ 2GA5 TITLE YEAST FRATAXIN SOLUTION STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FRATAXIN HOMOLOG, MITOCHONDRIAL; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 GENE: YFH1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_COMMON: BACTERIA KEYWDS YFH1P, NMR, STRUCTURE EXPDTA NMR, 20 STRUCTURES AUTHOR Y.HE,S.L.ALAM,S.V.PROTEASA,Y.ZHANG,E.LESUISSE,A.DANCIS, AUTHOR 2 T.L.STEMMLER REVDAT 2 21-MAR-06 1XAQ 1 OBSLTE REVDAT 1 24-MAY-05 1XAQ 0 JRNL AUTH Y.HE,S.L.ALAM,S.V.PROTEASA,Y.ZHANG,E.LESUISSE, JRNL AUTH 2 A.DANCIS,T.L.STEMMLER JRNL TITL YEAST FRATAXIN SOLUTION STRUCTURE, IRON BINDING, JRNL TITL 2 AND FERROCHELATASE INTERACTION JRNL REF BIOCHEMISTRY V. 43 16254 2004 JRNL REFN ASTM BICHAW US ISSN 0006-2960 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : A. T. BRUNGER ET AL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: FRATAXIN STRUCTURES WERE REFINED REMARK 3 USING ANGLE DYNAMICS(TAD) WITHIN THE PROGRAM DYANA AND REMARK 3 REGULARIZED IN THE PROGRAM CNS. REMARK 4 REMARK 4 1XAQ COMPLIES WITH FORMAT V. 3.0, 1-DEC-2006 REMARK 4 REMARK 4 THIS FILE IS A TEST VERSION. REMARK 4 REMARK 4 THIS IS THE REMEDIATED VERSION OF THIS PDB ENTRY. REMARK 4 REMEDIATED DATA FILE REVISION 3.100 (2007-05-01) REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-SEP-2004. REMARK 100 THE RCSB ID CODE IS RCSB030147. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 25MM REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : 1MM YEAST FRATAXIN PROTEIN, 5 REMARK 210 MM SODIUM PHOSPHATE BUFFER, REMARK 210 PH7, 2MM DTT, 90%H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1, FELIX 950, DYANA REMARK 210 1.5, XEASY 1.3.13 REMARK 210 METHOD USED : DYANA AND CNS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : ALL CALCULATED STRUCTURES REMARK 210 SUBMITTED REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 5 149.68 63.00 REMARK 500 1 CYS A 47 -32.61 90.82 REMARK 500 1 LYS A 77 -30.50 84.11 REMARK 500 1 ARG A 102 -56.00 73.95 REMARK 500 2 LYS A 77 -34.00 88.79 REMARK 500 2 ARG A 102 -56.12 73.16 REMARK 500 3 LYS A 77 -31.00 87.41 REMARK 500 4 LYS A 77 -30.58 86.28 REMARK 500 5 THR A 67 -92.02 178.87 REMARK 500 5 LYS A 77 -31.08 89.14 REMARK 500 6 LYS A 77 -32.22 87.90 REMARK 500 7 ASN A 16 -56.13 78.86 REMARK 500 7 ASP A 50 155.32 59.62 REMARK 500 7 ARG A 102 -55.92 74.83 REMARK 500 8 VAL A 9 168.75 54.56 REMARK 500 9 LYS A 77 -30.86 86.88 REMARK 500 10 LYS A 77 -32.43 84.77 REMARK 500 11 ASN A 16 156.21 60.47 REMARK 500 12 ASN A 16 166.80 59.28 REMARK 500 12 LYS A 77 -30.44 87.29 REMARK 500 13 CYS A 47 -31.52 86.63 REMARK 500 13 LYS A 77 -33.02 87.20 REMARK 500 14 LYS A 77 -31.32 87.22 REMARK 500 14 LEU A 101 -33.61 89.95 REMARK 500 15 ASN A 16 154.14 60.06 REMARK 500 15 LYS A 77 -32.83 78.58 REMARK 500 15 ARG A 102 -54.15 74.56 REMARK 500 16 LYS A 77 -30.92 85.06 REMARK 500 17 ASN A 16 -65.48 75.57 REMARK 500 17 LEU A 17 139.66 62.74 REMARK 500 17 LYS A 77 -30.49 87.08 REMARK 500 18 LYS A 77 -31.38 82.70 REMARK 500 19 ASP A 50 148.75 86.75 REMARK 500 19 THR A 67 -90.76 -176.96 REMARK 500 19 LYS A 77 -30.74 88.52 REMARK 500 20 LEU A 17 147.49 63.95 REMARK 500 20 LYS A 77 -31.15 86.31 DBREF 1XAQ A 2 123 UNP Q07540 FRDA_YEAST 52 173 SEQADV 1XAQ MET A 1 UNP Q07540 CLONING ARTIFACT SEQRES 1 A 123 MET GLU SER SER THR ASP GLY GLN VAL VAL PRO GLN GLU SEQRES 2 A 123 VAL LEU ASN LEU PRO LEU GLU LYS TYR HIS GLU GLU ALA SEQRES 3 A 123 ASP ASP TYR LEU ASP HIS LEU LEU ASP SER LEU GLU GLU SEQRES 4 A 123 LEU SER GLU ALA HIS PRO ASP CYS ILE PRO ASP VAL GLU SEQRES 5 A 123 LEU SER HIS GLY VAL MET THR LEU GLU ILE PRO ALA PHE SEQRES 6 A 123 GLY THR TYR VAL ILE ASN LYS GLN PRO PRO ASN LYS GLN SEQRES 7 A 123 ILE TRP LEU ALA SER PRO LEU SER GLY PRO ASN ARG PHE SEQRES 8 A 123 ASP LEU LEU ASN GLY GLU TRP VAL SER LEU ARG ASN GLY SEQRES 9 A 123 THR LYS LEU THR ASP ILE LEU THR GLU GLU VAL GLU LYS SEQRES 10 A 123 ALA ILE SER LYS SER GLN HELIX 1 1 PRO A 18 HIS A 44 1 27 HELIX 2 2 LYS A 106 GLN A 123 1 18 SHEET 1 A 3 VAL A 51 HIS A 55 0 SHEET 2 A 3 LEU A 60 PHE A 65 -1 O ILE A 62 N LEU A 53 SHEET 3 A 3 VAL A 69 ILE A 70 -1 O VAL A 69 N PHE A 65 SHEET 1 B 3 GLN A 78 LEU A 81 0 SHEET 2 B 3 ASN A 89 LEU A 94 -1 O ASN A 89 N LEU A 81 SHEET 3 B 3 GLU A 97 VAL A 99 -1 O VAL A 99 N ASP A 92 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1