data_1XE1 # _entry.id 1XE1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1XE1 RCSB RCSB030255 WWPDB D_1000030255 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id Pfu-880080-001 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 1XE1 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2004-09-08 _pdbx_database_status.status_code REL _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chang, J.C.' 1 'Zhao, M.' 2 'Zhou, W.' 3 'Liu, Z.J.' 4 'Tempel, W.' 5 'Arendall III, W.B.' 6 'Chen, L.' 7 'Lee, D.' 8 'Habel, J.E.' 9 'Rose, J.P.' 10 'Richardson, J.S.' 11 'Richardson, D.C.' 12 'Wang, B.C.' 13 'Southeast Collaboratory for Structural Genomics (SECSG)' 14 # _citation.id primary _citation.title 'Hypothetical Protein From Pyrococcus Furiosus Pfu-880080-001' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Chang, J.C.' 1 primary 'Zhao, M.' 2 primary 'Zhou, W.' 3 primary 'Liu, Z.J.' 4 primary 'Tempel, W.' 5 primary 'Arendall III, W.B.' 6 primary 'Chen, L.' 7 primary 'Lee, D.' 8 primary 'Habel, J.E.' 9 primary 'Rose, J.P.' 10 primary 'Richardson, J.S.' 11 primary 'Richardson, D.C.' 12 primary 'Wang, B.C.' 13 primary 'Southeast Collaboratory for Structural Genomics' 14 # _cell.length_a 88.625 _cell.length_b 88.625 _cell.length_c 73.267 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.entry_id 1XE1 _cell.pdbx_unique_axis ? _cell.Z_PDB 12 # _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.Int_Tables_number 179 _symmetry.entry_id 1XE1 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'hypothetical protein PF0907' 12797.627 1 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 water nat water 18.015 28 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;AHHHHHHGSGLFDFLKRKEVKEEEKIEILSKKPAGKVVVEEVVNI(MSE)GKDVIIGTVESG(MSE)IGVGFKVKGPSGI GGIVRIERNREKVEFAIAGDRIGISIEGKIGKVKKGDVLEIYQT ; _entity_poly.pdbx_seq_one_letter_code_can ;AHHHHHHGSGLFDFLKRKEVKEEEKIEILSKKPAGKVVVEEVVNIMGKDVIIGTVESGMIGVGFKVKGPSGIGGIVRIER NREKVEFAIAGDRIGISIEGKIGKVKKGDVLEIYQT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier Pfu-880080-001 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 GLY n 1 9 SER n 1 10 GLY n 1 11 LEU n 1 12 PHE n 1 13 ASP n 1 14 PHE n 1 15 LEU n 1 16 LYS n 1 17 ARG n 1 18 LYS n 1 19 GLU n 1 20 VAL n 1 21 LYS n 1 22 GLU n 1 23 GLU n 1 24 GLU n 1 25 LYS n 1 26 ILE n 1 27 GLU n 1 28 ILE n 1 29 LEU n 1 30 SER n 1 31 LYS n 1 32 LYS n 1 33 PRO n 1 34 ALA n 1 35 GLY n 1 36 LYS n 1 37 VAL n 1 38 VAL n 1 39 VAL n 1 40 GLU n 1 41 GLU n 1 42 VAL n 1 43 VAL n 1 44 ASN n 1 45 ILE n 1 46 MSE n 1 47 GLY n 1 48 LYS n 1 49 ASP n 1 50 VAL n 1 51 ILE n 1 52 ILE n 1 53 GLY n 1 54 THR n 1 55 VAL n 1 56 GLU n 1 57 SER n 1 58 GLY n 1 59 MSE n 1 60 ILE n 1 61 GLY n 1 62 VAL n 1 63 GLY n 1 64 PHE n 1 65 LYS n 1 66 VAL n 1 67 LYS n 1 68 GLY n 1 69 PRO n 1 70 SER n 1 71 GLY n 1 72 ILE n 1 73 GLY n 1 74 GLY n 1 75 ILE n 1 76 VAL n 1 77 ARG n 1 78 ILE n 1 79 GLU n 1 80 ARG n 1 81 ASN n 1 82 ARG n 1 83 GLU n 1 84 LYS n 1 85 VAL n 1 86 GLU n 1 87 PHE n 1 88 ALA n 1 89 ILE n 1 90 ALA n 1 91 GLY n 1 92 ASP n 1 93 ARG n 1 94 ILE n 1 95 GLY n 1 96 ILE n 1 97 SER n 1 98 ILE n 1 99 GLU n 1 100 GLY n 1 101 LYS n 1 102 ILE n 1 103 GLY n 1 104 LYS n 1 105 VAL n 1 106 LYS n 1 107 LYS n 1 108 GLY n 1 109 ASP n 1 110 VAL n 1 111 LEU n 1 112 GLU n 1 113 ILE n 1 114 TYR n 1 115 GLN n 1 116 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Pyrococcus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pyrococcus furiosus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2261 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8U2D2_PYRFU _struct_ref.pdbx_db_accession Q8U2D2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GLFDFLKRKEVKEEEKIEILSKKPAGKVVVEEVVNIMGKDVIIGTVESGMIGVGFKVKGPSGIGGIVRIERNREKVEFAI AGDRIGISIEGKIGKVKKGDVLEIYQT ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1XE1 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 10 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 116 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8U2D2 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 108 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 108 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1XE1 ALA A 1 ? UNP Q8U2D2 ? ? 'EXPRESSION TAG' -7 1 1 1XE1 HIS A 2 ? UNP Q8U2D2 ? ? 'EXPRESSION TAG' -6 2 1 1XE1 HIS A 3 ? UNP Q8U2D2 ? ? 'EXPRESSION TAG' -5 3 1 1XE1 HIS A 4 ? UNP Q8U2D2 ? ? 'EXPRESSION TAG' -4 4 1 1XE1 HIS A 5 ? UNP Q8U2D2 ? ? 'EXPRESSION TAG' -3 5 1 1XE1 HIS A 6 ? UNP Q8U2D2 ? ? 'EXPRESSION TAG' -2 6 1 1XE1 HIS A 7 ? UNP Q8U2D2 ? ? 'EXPRESSION TAG' -1 7 1 1XE1 GLY A 8 ? UNP Q8U2D2 ? ? 'EXPRESSION TAG' 0 8 1 1XE1 SER A 9 ? UNP Q8U2D2 ? ? 'EXPRESSION TAG' 1 9 1 1XE1 MSE A 46 ? UNP Q8U2D2 MET 38 'MODIFIED RESIDUE' 38 10 1 1XE1 MSE A 59 ? UNP Q8U2D2 MET 51 'MODIFIED RESIDUE' 51 11 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 1XE1 _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 62.10 _exptl_crystal.density_Matthews 3.25 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'modified microbatch' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '1.6M magnesium sulfate, 0.1M MES, pH 6.5, modified microbatch, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2004-03-20 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol SAD _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID # _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 2.00 _reflns.number_obs 11239 _reflns.percent_possible_obs 93.700 _reflns.pdbx_Rmerge_I_obs 0.068 _reflns.pdbx_chi_squared 1.049 _reflns.entry_id 1XE1 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_low _reflns_shell.d_res_high _reflns_shell.number_measured_all _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_chi_squared _reflns_shell.number_unique_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.percent_possible_obs _reflns_shell.pdbx_redundancy _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.07 2.00 665 57.400 0.443 1.232 ? ? ? ? ? ? ? 1 1 2.15 2.07 970 82.600 0.478 1.423 ? ? ? ? ? ? ? 2 1 2.25 2.15 1118 96.100 0.323 1.151 ? ? ? ? ? ? ? 3 1 2.37 2.25 1168 99.700 0.254 0.865 ? ? ? ? ? ? ? 4 1 2.52 2.37 1181 100.000 0.218 0.805 ? ? ? ? ? ? ? 5 1 2.71 2.52 1185 100.000 0.16 0.801 ? ? ? ? ? ? ? 6 1 2.99 2.71 1189 100.000 0.097 0.881 ? ? ? ? ? ? ? 7 1 3.42 2.99 1212 100.000 0.068 1.216 ? ? ? ? ? ? ? 8 1 4.31 3.42 1224 100.000 0.065 1.322 ? ? ? ? ? ? ? 9 1 50.00 4.31 1327 99.500 0.046 1.200 ? ? ? ? ? ? ? 10 1 # _refine.B_iso_mean 41.428 _refine.aniso_B[1][1] 0.078 _refine.aniso_B[2][2] 0.078 _refine.aniso_B[3][3] -0.117 _refine.aniso_B[1][2] 0.039 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details 'BABINET MODEL PLUS MASK' _refine.ls_d_res_high 2 _refine.ls_d_res_low 76.696 _refine.ls_R_factor_obs 0.22219 _refine.ls_number_reflns_R_free 525 _refine.ls_number_reflns_obs 11213 _refine.ls_R_factor_R_work 0.2213 _refine.ls_R_factor_R_free 0.2397 _refine.ls_wR_factor_R_work 0.221 _refine.ls_wR_factor_R_free 0.247 _refine.ls_percent_reflns_obs 93.582 _refine.ls_percent_reflns_R_free 4.682 _refine.correlation_coeff_Fo_to_Fc 0.947 _refine.correlation_coeff_Fo_to_Fc_free 0.946 _refine.pdbx_overall_ESU_R 0.135 _refine.pdbx_overall_ESU_R_Free 0.126 _refine.entry_id 1XE1 _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 652 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 28 _refine_hist.number_atoms_total 685 _refine_hist.d_res_high 2 _refine_hist.d_res_low 76.696 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 664 0.013 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 891 1.465 2.001 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 90 6.124 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 20 39.922 25.500 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 127 18.680 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 3 22.522 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 107 0.086 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 465 0.005 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 237 0.200 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 453 0.302 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 41 0.145 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 36 0.209 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 1 0.016 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 442 2.500 2.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 710 4.022 3.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 222 3.356 2.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 181 5.394 3.000 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_low _refine_ls_shell.d_res_high _refine_ls_shell.number_reflns_all _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free _refine_ls_shell.number_reflns_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.R_factor_all 20 2.051 2 859 51.688 425 0.333 19 0.5 . . . . 'X-RAY DIFFRACTION' . 20 2.107 2.051 844 74.289 599 0.318 28 0.302 . . . . 'X-RAY DIFFRACTION' . 20 2.168 2.107 818 88.631 692 0.271 33 0.261 . . . . 'X-RAY DIFFRACTION' . 20 2.235 2.168 797 96.110 726 0.247 40 0.277 . . . . 'X-RAY DIFFRACTION' . 20 2.308 2.235 766 99.347 729 0.241 32 0.262 . . . . 'X-RAY DIFFRACTION' . 20 2.389 2.308 752 100.000 716 0.248 36 0.23 . . . . 'X-RAY DIFFRACTION' . 20 2.479 2.389 725 100.000 690 0.245 35 0.224 . . . . 'X-RAY DIFFRACTION' . 20 2.580 2.479 694 100.000 653 0.229 41 0.267 . . . . 'X-RAY DIFFRACTION' . 20 2.695 2.580 681 100.000 650 0.257 31 0.294 . . . . 'X-RAY DIFFRACTION' . 20 2.826 2.695 650 100.000 610 0.248 40 0.33 . . . . 'X-RAY DIFFRACTION' . 20 2.979 2.826 614 100.000 594 0.252 20 0.171 . . . . 'X-RAY DIFFRACTION' . 20 3.159 2.979 582 100.000 553 0.225 29 0.254 . . . . 'X-RAY DIFFRACTION' . 20 3.377 3.159 558 100.000 525 0.222 33 0.331 . . . . 'X-RAY DIFFRACTION' . 20 3.647 3.377 517 100.000 491 0.198 26 0.254 . . . . 'X-RAY DIFFRACTION' . 20 3.994 3.647 484 100.000 462 0.19 22 0.211 . . . . 'X-RAY DIFFRACTION' . 20 4.464 3.994 447 100.000 429 0.166 18 0.195 . . . . 'X-RAY DIFFRACTION' . 20 5.151 4.464 394 100.000 379 0.167 15 0.202 . . . . 'X-RAY DIFFRACTION' . 20 6.302 5.151 346 100.000 339 0.228 7 0.117 . . . . 'X-RAY DIFFRACTION' . 20 8.882 6.302 278 100.000 266 0.232 12 0.161 . . . . 'X-RAY DIFFRACTION' . 20 76.696 8.882 176 95.455 160 0.287 8 0.191 . . . . 'X-RAY DIFFRACTION' . # _struct.entry_id 1XE1 _struct.title 'Hypothetical Protein From Pyrococcus Furiosus Pfu-880080-001' _struct.pdbx_descriptor 'conserved hypothetical protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1XE1 _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;Structural genomics, Unknown function, Protein structure initiative, SECSG, Pyrococcus furiosus, Conserved hypothetical protein, hyperthermophile, PSI, Southeast Collaboratory for Structural Genomics ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ILE 45 C ? ? ? 1_555 A MSE 46 N ? ? A ILE 37 A MSE 38 1_555 ? ? ? ? ? ? ? 1.330 ? covale2 covale ? ? A MSE 46 C ? ? ? 1_555 A GLY 47 N ? ? A MSE 38 A GLY 39 1_555 ? ? ? ? ? ? ? 1.329 ? covale3 covale ? ? A GLY 58 C ? ? ? 1_555 A MSE 59 N ? ? A GLY 50 A MSE 51 1_555 ? ? ? ? ? ? ? 1.325 ? covale4 covale ? ? A MSE 59 C ? ? ? 1_555 A ILE 60 N ? ? A MSE 51 A ILE 52 1_555 ? ? ? ? ? ? ? 1.324 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 83 ? VAL A 85 ? GLU A 75 VAL A 77 A 2 ILE A 72 ? ARG A 80 ? ILE A 64 ARG A 72 A 3 LYS A 65 ? LYS A 67 ? LYS A 57 LYS A 59 A 4 VAL A 110 ? TYR A 114 ? VAL A 102 TYR A 106 A 5 GLY A 35 ? ILE A 45 ? GLY A 27 ILE A 37 A 6 LYS A 48 ? GLY A 61 ? LYS A 40 GLY A 53 A 7 PHE A 87 ? ILE A 89 ? PHE A 79 ILE A 81 B 1 GLU A 83 ? VAL A 85 ? GLU A 75 VAL A 77 B 2 ILE A 72 ? ARG A 80 ? ILE A 64 ARG A 72 B 3 ARG A 93 ? GLU A 99 ? ARG A 85 GLU A 91 B 4 LYS A 48 ? GLY A 61 ? LYS A 40 GLY A 53 B 5 PHE A 87 ? ILE A 89 ? PHE A 79 ILE A 81 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLU A 83 ? O GLU A 75 N ARG A 80 ? N ARG A 72 A 2 3 O GLY A 73 ? O GLY A 65 N VAL A 66 ? N VAL A 58 A 3 4 N LYS A 65 ? N LYS A 57 O TYR A 114 ? O TYR A 106 A 4 5 O LEU A 111 ? O LEU A 103 N VAL A 37 ? N VAL A 29 A 5 6 N VAL A 43 ? N VAL A 35 O VAL A 50 ? O VAL A 42 A 6 7 N ILE A 60 ? N ILE A 52 O ALA A 88 ? O ALA A 80 B 1 2 O GLU A 83 ? O GLU A 75 N ARG A 80 ? N ARG A 72 B 2 3 N GLU A 79 ? N GLU A 71 O GLY A 95 ? O GLY A 87 B 3 4 O ILE A 94 ? O ILE A 86 N GLY A 53 ? N GLY A 45 B 4 5 N ILE A 60 ? N ILE A 52 O ALA A 88 ? O ALA A 80 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 3 _struct_site.details 'BINDING SITE FOR RESIDUE SO4 A 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 ARG A 77 ? ARG A 69 . ? 1_555 ? 2 AC1 3 LYS A 84 ? LYS A 76 . ? 1_555 ? 3 AC1 3 LYS A 101 ? LYS A 93 . ? 12_554 ? # _atom_sites.entry_id 1XE1 _atom_sites.fract_transf_matrix[1][1] 0.0113 _atom_sites.fract_transf_matrix[1][2] 0.0065 _atom_sites.fract_transf_matrix[1][3] 0.0000 _atom_sites.fract_transf_matrix[2][1] 0.0000 _atom_sites.fract_transf_matrix[2][2] 0.0130 _atom_sites.fract_transf_matrix[2][3] 0.0000 _atom_sites.fract_transf_matrix[3][1] 0.0000 _atom_sites.fract_transf_matrix[3][2] 0.0000 _atom_sites.fract_transf_matrix[3][3] 0.0136 _atom_sites.fract_transf_vector[1] 0.0000 _atom_sites.fract_transf_vector[2] 0.0000 _atom_sites.fract_transf_vector[3] 0.0000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 -7 ? ? ? A . n A 1 2 HIS 2 -6 ? ? ? A . n A 1 3 HIS 3 -5 ? ? ? A . n A 1 4 HIS 4 -4 ? ? ? A . n A 1 5 HIS 5 -3 ? ? ? A . n A 1 6 HIS 6 -2 ? ? ? A . n A 1 7 HIS 7 -1 ? ? ? A . n A 1 8 GLY 8 0 ? ? ? A . n A 1 9 SER 9 1 ? ? ? A . n A 1 10 GLY 10 2 ? ? ? A . n A 1 11 LEU 11 3 ? ? ? A . n A 1 12 PHE 12 4 ? ? ? A . n A 1 13 ASP 13 5 ? ? ? A . n A 1 14 PHE 14 6 ? ? ? A . n A 1 15 LEU 15 7 ? ? ? A . n A 1 16 LYS 16 8 ? ? ? A . n A 1 17 ARG 17 9 ? ? ? A . n A 1 18 LYS 18 10 ? ? ? A . n A 1 19 GLU 19 11 ? ? ? A . n A 1 20 VAL 20 12 ? ? ? A . n A 1 21 LYS 21 13 ? ? ? A . n A 1 22 GLU 22 14 ? ? ? A . n A 1 23 GLU 23 15 ? ? ? A . n A 1 24 GLU 24 16 ? ? ? A . n A 1 25 LYS 25 17 ? ? ? A . n A 1 26 ILE 26 18 18 ILE ILE A . n A 1 27 GLU 27 19 19 GLU GLU A . n A 1 28 ILE 28 20 20 ILE ILE A . n A 1 29 LEU 29 21 21 LEU LEU A . n A 1 30 SER 30 22 22 SER SER A . n A 1 31 LYS 31 23 23 LYS LYS A . n A 1 32 LYS 32 24 24 LYS LYS A . n A 1 33 PRO 33 25 25 PRO PRO A . n A 1 34 ALA 34 26 26 ALA ALA A . n A 1 35 GLY 35 27 27 GLY GLY A . n A 1 36 LYS 36 28 28 LYS LYS A . n A 1 37 VAL 37 29 29 VAL VAL A . n A 1 38 VAL 38 30 30 VAL VAL A . n A 1 39 VAL 39 31 31 VAL VAL A . n A 1 40 GLU 40 32 32 GLU GLU A . n A 1 41 GLU 41 33 33 GLU GLU A . n A 1 42 VAL 42 34 34 VAL VAL A . n A 1 43 VAL 43 35 35 VAL VAL A . n A 1 44 ASN 44 36 36 ASN ASN A . n A 1 45 ILE 45 37 37 ILE ILE A . n A 1 46 MSE 46 38 38 MSE MSE A . n A 1 47 GLY 47 39 39 GLY GLY A . n A 1 48 LYS 48 40 40 LYS LYS A . n A 1 49 ASP 49 41 41 ASP ASP A . n A 1 50 VAL 50 42 42 VAL VAL A . n A 1 51 ILE 51 43 43 ILE ILE A . n A 1 52 ILE 52 44 44 ILE ILE A . n A 1 53 GLY 53 45 45 GLY GLY A . n A 1 54 THR 54 46 46 THR THR A . n A 1 55 VAL 55 47 47 VAL VAL A . n A 1 56 GLU 56 48 48 GLU GLU A . n A 1 57 SER 57 49 49 SER SER A . n A 1 58 GLY 58 50 50 GLY GLY A . n A 1 59 MSE 59 51 51 MSE MSE A . n A 1 60 ILE 60 52 52 ILE ILE A . n A 1 61 GLY 61 53 53 GLY GLY A . n A 1 62 VAL 62 54 54 VAL VAL A . n A 1 63 GLY 63 55 55 GLY GLY A . n A 1 64 PHE 64 56 56 PHE PHE A . n A 1 65 LYS 65 57 57 LYS LYS A . n A 1 66 VAL 66 58 58 VAL VAL A . n A 1 67 LYS 67 59 59 LYS LYS A . n A 1 68 GLY 68 60 60 GLY GLY A . n A 1 69 PRO 69 61 61 PRO PRO A . n A 1 70 SER 70 62 62 SER SER A . n A 1 71 GLY 71 63 63 GLY GLY A . n A 1 72 ILE 72 64 64 ILE ILE A . n A 1 73 GLY 73 65 65 GLY GLY A . n A 1 74 GLY 74 66 66 GLY GLY A . n A 1 75 ILE 75 67 67 ILE ILE A . n A 1 76 VAL 76 68 68 VAL VAL A . n A 1 77 ARG 77 69 69 ARG ARG A . n A 1 78 ILE 78 70 70 ILE ILE A . n A 1 79 GLU 79 71 71 GLU GLU A . n A 1 80 ARG 80 72 72 ARG ARG A . n A 1 81 ASN 81 73 73 ASN ASN A . n A 1 82 ARG 82 74 74 ARG ARG A . n A 1 83 GLU 83 75 75 GLU GLU A . n A 1 84 LYS 84 76 76 LYS LYS A . n A 1 85 VAL 85 77 77 VAL VAL A . n A 1 86 GLU 86 78 78 GLU GLU A . n A 1 87 PHE 87 79 79 PHE PHE A . n A 1 88 ALA 88 80 80 ALA ALA A . n A 1 89 ILE 89 81 81 ILE ILE A . n A 1 90 ALA 90 82 82 ALA ALA A . n A 1 91 GLY 91 83 83 GLY GLY A . n A 1 92 ASP 92 84 84 ASP ASP A . n A 1 93 ARG 93 85 85 ARG ARG A . n A 1 94 ILE 94 86 86 ILE ILE A . n A 1 95 GLY 95 87 87 GLY GLY A . n A 1 96 ILE 96 88 88 ILE ILE A . n A 1 97 SER 97 89 89 SER SER A . n A 1 98 ILE 98 90 90 ILE ILE A . n A 1 99 GLU 99 91 91 GLU GLU A . n A 1 100 GLY 100 92 92 GLY GLY A . n A 1 101 LYS 101 93 93 LYS LYS A . n A 1 102 ILE 102 94 94 ILE ILE A . n A 1 103 GLY 103 95 95 GLY GLY A . n A 1 104 LYS 104 96 96 LYS LYS A . n A 1 105 VAL 105 97 97 VAL VAL A . n A 1 106 LYS 106 98 98 LYS LYS A . n A 1 107 LYS 107 99 99 LYS LYS A . n A 1 108 GLY 108 100 100 GLY GLY A . n A 1 109 ASP 109 101 101 ASP ASP A . n A 1 110 VAL 110 102 102 VAL VAL A . n A 1 111 LEU 111 103 103 LEU LEU A . n A 1 112 GLU 112 104 104 GLU GLU A . n A 1 113 ILE 113 105 105 ILE ILE A . n A 1 114 TYR 114 106 106 TYR TYR A . n A 1 115 GLN 115 107 107 GLN GLN A . n A 1 116 THR 116 108 108 THR THR A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Southeast Collaboratory for Structural Genomics' _pdbx_SG_project.initial_of_center SECSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 301 301 SO4 SO4 A . C 3 HOH 1 201 201 HOH HOH A . C 3 HOH 2 202 202 HOH HOH A . C 3 HOH 3 203 203 HOH HOH A . C 3 HOH 4 204 204 HOH HOH A . C 3 HOH 5 205 205 HOH HOH A . C 3 HOH 6 206 206 HOH HOH A . C 3 HOH 7 207 207 HOH HOH A . C 3 HOH 8 208 208 HOH HOH A . C 3 HOH 9 209 209 HOH HOH A . C 3 HOH 10 210 210 HOH HOH A . C 3 HOH 11 211 211 HOH HOH A . C 3 HOH 12 212 212 HOH HOH A . C 3 HOH 13 213 213 HOH HOH A . C 3 HOH 14 214 214 HOH HOH A . C 3 HOH 15 215 215 HOH HOH A . C 3 HOH 16 216 216 HOH HOH A . C 3 HOH 17 217 217 HOH HOH A . C 3 HOH 18 218 218 HOH HOH A . C 3 HOH 19 219 219 HOH HOH A . C 3 HOH 20 220 220 HOH HOH A . C 3 HOH 21 221 221 HOH HOH A . C 3 HOH 22 222 222 HOH HOH A . C 3 HOH 23 223 223 HOH HOH A . C 3 HOH 24 224 224 HOH HOH A . C 3 HOH 25 225 225 HOH HOH A . C 3 HOH 26 226 226 HOH HOH A . C 3 HOH 27 227 227 HOH HOH A . C 3 HOH 28 228 228 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 46 A MSE 38 ? MET SELENOMETHIONINE 2 A MSE 59 A MSE 51 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PQS monomeric 1 2 software_defined_assembly PISA dimeric 2 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C 2 1,2 A,B,C 3 1,3 A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 1200 ? 2 MORE -36 ? 2 'SSA (A^2)' 9570 ? 3 'ABSA (A^2)' 1170 ? 3 MORE -25 ? 3 'SSA (A^2)' 9600 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 12_554 x,x-y,-z-1/6 0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -12.2111666667 3 'crystal symmetry operation' 9_765 -x+2,-x+y+1,-z+1/3 -0.5000000000 -0.8660254038 0.0000000000 132.9375000000 -0.8660254038 0.5000000000 0.0000000000 76.7515014104 0.0000000000 0.0000000000 -1.0000000000 24.4223333333 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-09-21 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.date' 5 4 'Structure model' '_software.language' 6 4 'Structure model' '_software.location' 7 4 'Structure model' '_software.name' 8 4 'Structure model' '_software.type' 9 4 'Structure model' '_software.version' # loop_ _pdbx_phasing_MAD_shell.d_res_low _pdbx_phasing_MAD_shell.d_res_high _pdbx_phasing_MAD_shell.reflns _pdbx_phasing_MAD_shell.fom 20.000 10.92 162 0.21 10.92 7.35 235 0.31 7.35 5.88 280 0.36 5.88 5.04 315 0.35 5.04 4.48 348 0.37 4.48 4.07 387 0.38 4.07 3.76 407 0.36 3.76 3.51 433 0.36 # _pdbx_phasing_dm.entry_id 1XE1 _pdbx_phasing_dm.fom_acentric 0.48 _pdbx_phasing_dm.fom_centric 0.52 _pdbx_phasing_dm.fom 0.49 _pdbx_phasing_dm.reflns_acentric 5367 _pdbx_phasing_dm.reflns_centric 1308 _pdbx_phasing_dm.reflns 6675 # loop_ _pdbx_phasing_dm_shell.d_res_low _pdbx_phasing_dm_shell.d_res_high _pdbx_phasing_dm_shell.fom_acentric _pdbx_phasing_dm_shell.fom_centric _pdbx_phasing_dm_shell.fom _pdbx_phasing_dm_shell.reflns_acentric _pdbx_phasing_dm_shell.reflns_centric _pdbx_phasing_dm_shell.reflns 19.306 6.9 0.93 0.78 0.93 181 154 335 6.9 4.3 0.90 0.71 0.85 706 276 982 4.3 3.4 0.84 0.67 0.81 925 255 1180 3.4 3.0 0.56 0.52 0.55 965 202 1167 3.0 2.6 0.23 0.24 0.23 1643 287 1930 2.6 2.4 0.08 0.09 0.08 947 134 1081 # _phasing.method SAD # _phasing_MAD.entry_id 1XE1 _phasing_MAD.pdbx_d_res_high 3.400 _phasing_MAD.pdbx_d_res_low 20.000 _phasing_MAD.pdbx_reflns 2567 _phasing_MAD.pdbx_fom 0.35 # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal SOLVE 2.03 20-Sept-2002 program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 1 RESOLVE 2.03 10-Aug-2002 program 'Terwilliger, T. C' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 2 DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 3 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 4 PDB_EXTRACT 1.0 02/20/2004 program H.Yang sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C/C++ ? 5 MAR345 . ? ? ? ? 'data collection' ? ? ? 6 REFMAC 5 ? ? ? ? refinement ? ? ? 7 # _pdbx_database_remark.id 300 _pdbx_database_remark.text ;BIOMOLECULE THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 1 CHAIN. THE BIOLOGICAL UNIT IS UNKNOWN. ; # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 84 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 84 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 84 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.88 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 5.58 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ILE 18 ? CG1 ? A ILE 26 CG1 2 1 Y 1 A ILE 18 ? CG2 ? A ILE 26 CG2 3 1 Y 1 A ILE 18 ? CD1 ? A ILE 26 CD1 4 1 Y 1 A GLU 19 ? CG ? A GLU 27 CG 5 1 Y 1 A GLU 19 ? CD ? A GLU 27 CD 6 1 Y 1 A GLU 19 ? OE1 ? A GLU 27 OE1 7 1 Y 1 A GLU 19 ? OE2 ? A GLU 27 OE2 8 1 Y 1 A LYS 23 ? CB ? A LYS 31 CB 9 1 Y 1 A LYS 23 ? CG ? A LYS 31 CG 10 1 Y 1 A LYS 23 ? CD ? A LYS 31 CD 11 1 Y 1 A LYS 23 ? CE ? A LYS 31 CE 12 1 Y 1 A LYS 23 ? NZ ? A LYS 31 NZ 13 1 Y 1 A LYS 24 ? CD ? A LYS 32 CD 14 1 Y 1 A LYS 24 ? CE ? A LYS 32 CE 15 1 Y 1 A LYS 24 ? NZ ? A LYS 32 NZ 16 1 Y 1 A LYS 40 ? NZ ? A LYS 48 NZ 17 1 Y 1 A ARG 74 ? CG ? A ARG 82 CG 18 1 Y 1 A ARG 74 ? CD ? A ARG 82 CD 19 1 Y 1 A ARG 74 ? NE ? A ARG 82 NE 20 1 Y 1 A ARG 74 ? CZ ? A ARG 82 CZ 21 1 Y 1 A ARG 74 ? NH1 ? A ARG 82 NH1 22 1 Y 1 A ARG 74 ? NH2 ? A ARG 82 NH2 23 1 Y 1 A LYS 96 ? CG ? A LYS 104 CG 24 1 Y 1 A LYS 96 ? CD ? A LYS 104 CD 25 1 Y 1 A LYS 96 ? CE ? A LYS 104 CE 26 1 Y 1 A LYS 96 ? NZ ? A LYS 104 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA -7 ? A ALA 1 2 1 Y 1 A HIS -6 ? A HIS 2 3 1 Y 1 A HIS -5 ? A HIS 3 4 1 Y 1 A HIS -4 ? A HIS 4 5 1 Y 1 A HIS -3 ? A HIS 5 6 1 Y 1 A HIS -2 ? A HIS 6 7 1 Y 1 A HIS -1 ? A HIS 7 8 1 Y 1 A GLY 0 ? A GLY 8 9 1 Y 1 A SER 1 ? A SER 9 10 1 Y 1 A GLY 2 ? A GLY 10 11 1 Y 1 A LEU 3 ? A LEU 11 12 1 Y 1 A PHE 4 ? A PHE 12 13 1 Y 1 A ASP 5 ? A ASP 13 14 1 Y 1 A PHE 6 ? A PHE 14 15 1 Y 1 A LEU 7 ? A LEU 15 16 1 Y 1 A LYS 8 ? A LYS 16 17 1 Y 1 A ARG 9 ? A ARG 17 18 1 Y 1 A LYS 10 ? A LYS 18 19 1 Y 1 A GLU 11 ? A GLU 19 20 1 Y 1 A VAL 12 ? A VAL 20 21 1 Y 1 A LYS 13 ? A LYS 21 22 1 Y 1 A GLU 14 ? A GLU 22 23 1 Y 1 A GLU 15 ? A GLU 23 24 1 Y 1 A GLU 16 ? A GLU 24 25 1 Y 1 A LYS 17 ? A LYS 25 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH #