data_1XKM # _entry.id 1XKM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1XKM pdb_00001xkm 10.2210/pdb1xkm/pdb RCSB RCSB030461 ? ? WWPDB D_1000030461 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1XKM _pdbx_database_status.recvd_initial_deposition_date 2004-09-29 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Amodeo, P.' 1 'Raimondo, D.' 2 'Andreotti, G.' 3 'Motta, A.' 4 'Scaloni, A.' 5 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'A folding-dependent mechanism of antimicrobial peptide resistance to degradation unveiled by solution structure of distinctin.' Proc.Natl.Acad.Sci.Usa 102 6309 6314 2005 PNASA6 US 0027-8424 0040 ? 15840728 10.1073/pnas.0409004102 1 'A novel heterodimeric antimicrobial peptide from the tree-frog Phyllomedusa distincta' 'Febs Lett.' 494 85 89 2001 FEBLAL NE 0014-5793 0165 ? 11297740 '10.1016/S0014-5793(01)02324-9' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Raimondo, D.' 1 ? primary 'Andreotti, G.' 2 ? primary 'Saint, N.' 3 ? primary 'Amodeo, P.' 4 ? primary 'Renzone, G.' 5 ? primary 'Sanseverino, M.' 6 ? primary 'Zocchi, I.' 7 ? primary 'Molle, G.' 8 ? primary 'Motta, A.' 9 ? primary 'Scaloni, A.' 10 ? 1 'Batista, C.V.' 11 ? 1 'Scaloni, A.' 12 ? 1 'Rigden, D.J.' 13 ? 1 'Silva, L.R.' 14 ? 1 'Rodrigues Romero, A.' 15 ? 1 'Dukor, R.' 16 ? 1 'Sebben, A.' 17 ? 1 'Talamo, F.' 18 ? 1 'Bloch, C.' 19 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Distinctin chain A' 2532.076 2 ? ? ? ? 2 polymer syn 'Distinctin chain B' 2960.563 2 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ENREVPPGFTALIKTLRKCKII ENREVPPGFTALIKTLRKCKII A,C ? 2 'polypeptide(L)' no no NLVSGLIEARKYLEQLHRKLKNCKV NLVSGLIEARKYLEQLHRKLKNCKV B,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 ASN n 1 3 ARG n 1 4 GLU n 1 5 VAL n 1 6 PRO n 1 7 PRO n 1 8 GLY n 1 9 PHE n 1 10 THR n 1 11 ALA n 1 12 LEU n 1 13 ILE n 1 14 LYS n 1 15 THR n 1 16 LEU n 1 17 ARG n 1 18 LYS n 1 19 CYS n 1 20 LYS n 1 21 ILE n 1 22 ILE n 2 1 ASN n 2 2 LEU n 2 3 VAL n 2 4 SER n 2 5 GLY n 2 6 LEU n 2 7 ILE n 2 8 GLU n 2 9 ALA n 2 10 ARG n 2 11 LYS n 2 12 TYR n 2 13 LEU n 2 14 GLU n 2 15 GLN n 2 16 LEU n 2 17 HIS n 2 18 ARG n 2 19 LYS n 2 20 LEU n 2 21 LYS n 2 22 ASN n 2 23 CYS n 2 24 LYS n 2 25 VAL n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? ? ? ? 'The peptide was prepared by solid-phase synthesis. This sequence occurs naturally in the tree-frog Phyllomedusa distincta' 2 1 sample ? ? ? ? ? 'The peptide was prepared by solid-phase synthesis. This sequence occurs naturally in the tree-frog Phyllomedusa distincta' # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 1 PDB 1XKM 1XKM ? ? ? 2 2 PDB 1XKM 1XKM ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1XKM A 1 ? 22 ? 1XKM 1 ? 22 ? 1 22 2 2 1XKM B 1 ? 25 ? 1XKM 1 ? 25 ? 1 25 3 1 1XKM C 1 ? 22 ? 1XKM 1 ? 22 ? 1 22 4 2 1XKM D 1 ? 25 ? 1XKM 1 ? 25 ? 1 25 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 '2D NOESY' 2 1 1 '2D TOCSY' 3 1 2 '2D NOESY' 4 1 2 '2D TOCSY' 5 2 1 '2D NOESY' 6 2 1 '2D TOCSY' 7 2 2 '2D NOESY' 8 2 2 '2D TOCSY' 9 3 3 '2D NOESY' 10 3 3 '2D TOCSY' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature_units 1 310 ambient 6.8 NULL ? K 2 300 ambient 6.8 NULL ? K 3 310 ambient 6.4 NULL ? K 4 300 ambient 6.4 NULL ? K 5 310 ambient 5.4 NULL ? K 6 300 ambient 5.4 NULL ? K 7 310 ambient 5.0 NULL ? K 8 300 ambient 5.0 NULL ? K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 '3.8mM Natural Abundance Distinctin; NaN3' '90% H2O/10% D2O' 2 '0.05mM Natural Abundance Distinctin; NaN3' '90% H2O/10% D2O' 3 '3.8mM Natural Abundance Distinctin; NaN3' '100% D2O' 4 '0.05mM Natural Abundance Distinctin; NaN3' '100% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model DRX _pdbx_nmr_spectrometer.field_strength 500 # _pdbx_nmr_refine.entry_id 1XKM _pdbx_nmr_refine.method 'simulated annealing with cartesian coordinate dynamics' _pdbx_nmr_refine.details ;the structures are based on a total of 636 restraints, 548 are NOE-derived distance constraints, 88 distance restraints from hydrogen bonds. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1XKM _pdbx_nmr_details.text 'This structure was determined using standard 2D homonuclear techniques.' # _pdbx_nmr_ensemble.entry_id 1XKM _pdbx_nmr_ensemble.conformers_calculated_total_number 150 _pdbx_nmr_ensemble.conformers_submitted_total_number 24 _pdbx_nmr_ensemble.conformer_selection_criteria ;Structures within a prefixed threshold of amber energy, solvent accessible surface area and symmetry-based penalty functions (see jrnl) ; _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1XKM _pdbx_nmr_representative.conformer_id 20 _pdbx_nmr_representative.selection_criteria 'structure within a prefixed threshold of amber energy, solvent accessible surface area and symmetry-based penalty functions' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal Amber 5 'structure solution' 'Kollman, Case' 1 Amber 5 refinement 'Kollman, Case' 2 MOLMOL 2K.2 'data analysis' Koradi 3 XwinNMR 2.0 processing Bruker 4 # _exptl.entry_id 1XKM _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1XKM _struct.title 'NMR structure of antimicrobial peptide distinctin in water' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1XKM _struct_keywords.pdbx_keywords ANTIBIOTIC _struct_keywords.text 'PORE-FORMING PEPTIDE, HETERODIMER, HOMODIMER, DISULFIDE, FOUR-HELIX BUNDLE, ANTIBIOTIC' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? # loop_ _struct_biol.id 1 2 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 7 ? CYS A 19 ? PRO A 7 CYS A 19 1 ? 13 HELX_P HELX_P2 2 LEU B 6 ? LYS B 21 ? LEU B 6 LYS B 21 1 ? 16 HELX_P HELX_P3 3 PRO C 7 ? CYS C 19 ? PRO C 7 CYS C 19 1 ? 13 HELX_P HELX_P4 4 LEU D 6 ? LYS D 21 ? LEU D 6 LYS D 21 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 19 SG ? ? ? 1_555 B CYS 23 SG ? ? A CYS 19 B CYS 23 1_555 ? ? ? ? ? ? ? 2.114 ? ? disulf2 disulf ? ? C CYS 19 SG ? ? ? 1_555 D CYS 23 SG ? ? C CYS 19 D CYS 23 1_555 ? ? ? ? ? ? ? 2.115 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1XKM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1XKM _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 1 1 GLU GLU A . n A 1 2 ASN 2 2 2 ASN ASN A . n A 1 3 ARG 3 3 3 ARG ARG A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 PRO 6 6 6 PRO PRO A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 PHE 9 9 9 PHE PHE A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 CYS 19 19 19 CYS CYS A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 ILE 22 22 22 ILE ILE A . n B 2 1 ASN 1 1 1 ASN ASN B . n B 2 2 LEU 2 2 2 LEU LEU B . n B 2 3 VAL 3 3 3 VAL VAL B . n B 2 4 SER 4 4 4 SER SER B . n B 2 5 GLY 5 5 5 GLY GLY B . n B 2 6 LEU 6 6 6 LEU LEU B . n B 2 7 ILE 7 7 7 ILE ILE B . n B 2 8 GLU 8 8 8 GLU GLU B . n B 2 9 ALA 9 9 9 ALA ALA B . n B 2 10 ARG 10 10 10 ARG ARG B . n B 2 11 LYS 11 11 11 LYS LYS B . n B 2 12 TYR 12 12 12 TYR TYR B . n B 2 13 LEU 13 13 13 LEU LEU B . n B 2 14 GLU 14 14 14 GLU GLU B . n B 2 15 GLN 15 15 15 GLN GLN B . n B 2 16 LEU 16 16 16 LEU LEU B . n B 2 17 HIS 17 17 17 HIS HIS B . n B 2 18 ARG 18 18 18 ARG ARG B . n B 2 19 LYS 19 19 19 LYS LYS B . n B 2 20 LEU 20 20 20 LEU LEU B . n B 2 21 LYS 21 21 21 LYS LYS B . n B 2 22 ASN 22 22 22 ASN ASN B . n B 2 23 CYS 23 23 23 CYS CYS B . n B 2 24 LYS 24 24 24 LYS LYS B . n B 2 25 VAL 25 25 25 VAL VAL B . n C 1 1 GLU 1 1 1 GLU GLU C . n C 1 2 ASN 2 2 2 ASN ASN C . n C 1 3 ARG 3 3 3 ARG ARG C . n C 1 4 GLU 4 4 4 GLU GLU C . n C 1 5 VAL 5 5 5 VAL VAL C . n C 1 6 PRO 6 6 6 PRO PRO C . n C 1 7 PRO 7 7 7 PRO PRO C . n C 1 8 GLY 8 8 8 GLY GLY C . n C 1 9 PHE 9 9 9 PHE PHE C . n C 1 10 THR 10 10 10 THR THR C . n C 1 11 ALA 11 11 11 ALA ALA C . n C 1 12 LEU 12 12 12 LEU LEU C . n C 1 13 ILE 13 13 13 ILE ILE C . n C 1 14 LYS 14 14 14 LYS LYS C . n C 1 15 THR 15 15 15 THR THR C . n C 1 16 LEU 16 16 16 LEU LEU C . n C 1 17 ARG 17 17 17 ARG ARG C . n C 1 18 LYS 18 18 18 LYS LYS C . n C 1 19 CYS 19 19 19 CYS CYS C . n C 1 20 LYS 20 20 20 LYS LYS C . n C 1 21 ILE 21 21 21 ILE ILE C . n C 1 22 ILE 22 22 22 ILE ILE C . n D 2 1 ASN 1 1 1 ASN ASN D . n D 2 2 LEU 2 2 2 LEU LEU D . n D 2 3 VAL 3 3 3 VAL VAL D . n D 2 4 SER 4 4 4 SER SER D . n D 2 5 GLY 5 5 5 GLY GLY D . n D 2 6 LEU 6 6 6 LEU LEU D . n D 2 7 ILE 7 7 7 ILE ILE D . n D 2 8 GLU 8 8 8 GLU GLU D . n D 2 9 ALA 9 9 9 ALA ALA D . n D 2 10 ARG 10 10 10 ARG ARG D . n D 2 11 LYS 11 11 11 LYS LYS D . n D 2 12 TYR 12 12 12 TYR TYR D . n D 2 13 LEU 13 13 13 LEU LEU D . n D 2 14 GLU 14 14 14 GLU GLU D . n D 2 15 GLN 15 15 15 GLN GLN D . n D 2 16 LEU 16 16 16 LEU LEU D . n D 2 17 HIS 17 17 17 HIS HIS D . n D 2 18 ARG 18 18 18 ARG ARG D . n D 2 19 LYS 19 19 19 LYS LYS D . n D 2 20 LEU 20 20 20 LEU LEU D . n D 2 21 LYS 21 21 21 LYS LYS D . n D 2 22 ASN 22 22 22 ASN ASN D . n D 2 23 CYS 23 23 23 CYS CYS D . n D 2 24 LYS 24 24 24 LYS LYS D . n D 2 25 VAL 25 25 25 VAL VAL D . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-04-05 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' # _pdbx_database_remark.id 650 _pdbx_database_remark.text ;HELIX DETERMINATION METHOD: AUTHOR DETERMINED ; # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 11 CA B CYS 23 ? ? CB B CYS 23 ? ? SG B CYS 23 ? ? 122.07 114.20 7.87 1.10 N 2 12 CA B CYS 23 ? ? CB B CYS 23 ? ? SG B CYS 23 ? ? 121.58 114.20 7.38 1.10 N 3 19 CA D CYS 23 ? ? CB D CYS 23 ? ? SG D CYS 23 ? ? 121.69 114.20 7.49 1.10 N 4 23 NE B ARG 10 ? ? CZ B ARG 10 ? ? NH1 B ARG 10 ? ? 123.38 120.30 3.08 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 3 ? ? -117.17 65.33 2 1 VAL A 5 ? ? 66.19 90.86 3 1 ILE A 21 ? ? 71.46 -56.94 4 1 LYS B 24 ? ? 70.49 -56.70 5 1 ASN C 2 ? ? -155.60 26.13 6 1 ARG C 3 ? ? -130.90 -73.04 7 1 SER D 4 ? ? 71.03 170.18 8 1 LEU D 6 ? ? -28.28 -64.96 9 1 LYS D 24 ? ? 62.21 -48.33 10 2 ASN A 2 ? ? 68.80 -39.93 11 2 ILE A 21 ? ? 69.28 -51.80 12 2 LEU B 2 ? ? -76.68 -70.24 13 2 LYS B 24 ? ? 69.51 -57.47 14 2 GLU C 4 ? ? 66.47 -53.86 15 2 SER D 4 ? ? 168.99 -60.79 16 2 CYS D 23 ? ? -57.92 -70.84 17 2 LYS D 24 ? ? 32.04 41.69 18 3 VAL A 5 ? ? -42.11 107.74 19 3 ILE A 21 ? ? 68.27 -57.79 20 3 LEU B 2 ? ? 65.17 -68.27 21 3 VAL B 3 ? ? -62.96 -70.45 22 3 GLU C 4 ? ? -92.20 -71.12 23 3 ILE C 21 ? ? 67.71 -62.88 24 3 LYS D 24 ? ? -151.71 -39.60 25 4 ASN A 2 ? ? 67.60 -52.05 26 4 ARG A 3 ? ? 75.85 -55.15 27 4 ILE A 21 ? ? 71.15 -59.01 28 4 LEU B 2 ? ? 63.45 -72.55 29 4 SER B 4 ? ? -167.30 -133.88 30 4 LYS B 24 ? ? 72.93 -52.82 31 4 ASN C 2 ? ? -65.30 90.40 32 4 GLU C 4 ? ? 64.60 -66.66 33 4 ILE C 21 ? ? 67.43 -55.23 34 4 LYS D 24 ? ? 68.54 -54.29 35 5 ASN A 2 ? ? -70.09 45.28 36 5 ARG A 3 ? ? 66.98 -58.58 37 5 ILE A 21 ? ? 67.04 -57.77 38 5 LEU B 2 ? ? 31.36 -89.26 39 5 LYS B 24 ? ? 59.86 -73.38 40 5 ASN C 2 ? ? 67.62 -177.74 41 5 ARG C 3 ? ? -9.29 99.73 42 5 ILE C 21 ? ? 68.91 -62.20 43 5 SER D 4 ? ? -133.35 -44.93 44 5 LYS D 24 ? ? -68.17 65.77 45 6 ARG A 3 ? ? 69.21 -42.44 46 6 GLU A 4 ? ? 68.54 -59.49 47 6 ILE A 21 ? ? 70.67 -53.50 48 6 SER B 4 ? ? -63.53 74.23 49 6 LYS B 24 ? ? -161.78 25.08 50 6 ASN C 2 ? ? 64.66 -58.04 51 6 ARG C 3 ? ? 71.12 -59.30 52 6 GLU C 4 ? ? -64.02 92.26 53 6 ILE C 21 ? ? 70.74 -55.21 54 6 LEU D 2 ? ? -124.40 -55.12 55 6 SER D 4 ? ? 66.04 89.74 56 6 LYS D 24 ? ? 69.23 -57.65 57 7 ARG A 3 ? ? 67.21 -58.02 58 7 ILE A 21 ? ? 71.19 -52.36 59 7 SER B 4 ? ? 69.67 -64.12 60 7 LEU B 6 ? ? -12.11 -62.45 61 7 LYS B 24 ? ? 69.66 -55.43 62 7 VAL C 5 ? ? -24.56 104.69 63 7 ILE C 21 ? ? 66.96 -60.72 64 7 LYS D 24 ? ? 61.31 -49.86 65 8 ILE A 21 ? ? 70.39 -58.09 66 8 ASN B 22 ? ? -59.73 -4.37 67 8 LYS B 24 ? ? -144.86 -37.38 68 8 ILE C 21 ? ? 65.47 -64.22 69 8 LEU D 2 ? ? 55.62 -166.85 70 8 LYS D 24 ? ? 25.45 68.35 71 9 GLU A 4 ? ? 65.25 -77.86 72 9 VAL A 5 ? ? -47.36 105.11 73 9 CYS A 19 ? ? -69.56 5.78 74 9 LEU B 2 ? ? 17.19 -92.20 75 9 GLU C 4 ? ? -69.92 50.62 76 9 VAL C 5 ? ? 179.55 115.05 77 9 ILE C 21 ? ? 68.48 -60.14 78 9 LEU D 2 ? ? 62.77 155.80 79 10 GLU A 4 ? ? -123.38 -119.94 80 10 VAL A 5 ? ? -170.73 99.45 81 10 ILE A 21 ? ? 72.52 -55.39 82 10 LEU B 2 ? ? 46.51 -114.27 83 10 SER B 4 ? ? -69.65 87.24 84 10 LYS B 24 ? ? 59.96 -47.09 85 10 GLU C 4 ? ? 58.96 -65.39 86 10 ILE C 21 ? ? 68.35 -61.46 87 10 LEU D 2 ? ? 69.85 -58.75 88 10 LYS D 24 ? ? -161.78 68.40 89 11 ILE A 21 ? ? 69.06 -60.59 90 11 LEU B 2 ? ? 68.19 -62.42 91 11 VAL B 3 ? ? -65.67 80.02 92 11 SER B 4 ? ? 110.21 -17.10 93 11 ASN C 2 ? ? -144.84 59.71 94 11 GLU C 4 ? ? 64.68 -65.82 95 11 ILE C 21 ? ? 67.39 -61.61 96 11 LYS D 24 ? ? 63.83 -66.20 97 12 GLU A 4 ? ? 61.88 -69.83 98 12 ILE A 21 ? ? 71.06 -55.55 99 12 VAL B 3 ? ? 64.80 -70.25 100 12 LYS B 24 ? ? -69.82 71.92 101 12 ARG C 3 ? ? -44.18 109.23 102 12 GLU C 4 ? ? -73.44 33.39 103 12 VAL C 5 ? ? -177.67 104.08 104 12 ILE C 21 ? ? 68.63 -63.82 105 12 LYS D 24 ? ? 64.59 -65.21 106 13 ASN A 2 ? ? -68.97 89.91 107 13 ARG A 3 ? ? -68.53 66.69 108 13 GLU A 4 ? ? -87.81 -123.22 109 13 ILE A 21 ? ? 67.91 -62.86 110 13 SER B 4 ? ? -40.76 -70.35 111 13 LYS B 24 ? ? 71.75 -54.64 112 13 ARG C 3 ? ? 52.81 -113.08 113 13 ILE C 21 ? ? 69.27 -59.32 114 13 LEU D 2 ? ? 62.99 -66.76 115 13 SER D 4 ? ? 72.85 -46.72 116 14 ASN A 2 ? ? 50.94 -73.88 117 14 GLU A 4 ? ? 70.81 -60.78 118 14 VAL A 5 ? ? -174.43 125.80 119 14 ILE A 21 ? ? 67.57 -59.11 120 14 LYS B 24 ? ? 72.12 -59.30 121 14 ILE C 21 ? ? 68.30 -58.93 122 14 LEU D 2 ? ? 63.78 -63.88 123 14 LEU D 6 ? ? 19.85 -96.93 124 15 ASN A 2 ? ? 67.35 -61.89 125 15 ARG A 3 ? ? 62.69 170.23 126 15 GLU A 4 ? ? 68.08 -44.25 127 15 ILE A 21 ? ? 71.62 -59.66 128 15 VAL B 3 ? ? -92.86 -68.99 129 15 SER B 4 ? ? -170.26 -179.52 130 15 LEU B 6 ? ? 37.75 -94.42 131 15 LYS B 24 ? ? -66.76 65.10 132 15 VAL C 5 ? ? -164.51 118.19 133 15 ILE C 21 ? ? 70.09 -59.28 134 15 LYS D 24 ? ? 68.20 -58.80 135 16 ARG A 3 ? ? -109.98 -77.17 136 16 GLU A 4 ? ? -151.48 87.10 137 16 ILE A 21 ? ? 68.85 -57.03 138 16 LEU B 2 ? ? 65.74 -65.77 139 16 VAL B 3 ? ? -63.23 84.89 140 16 ASN C 2 ? ? 52.52 -95.08 141 16 GLU C 4 ? ? 65.92 -68.43 142 16 ILE C 21 ? ? 71.30 -60.29 143 16 LEU D 2 ? ? 60.10 179.00 144 17 GLU A 4 ? ? -147.39 -135.45 145 17 ILE A 21 ? ? 67.28 -52.30 146 17 LEU B 2 ? ? 54.65 -100.46 147 17 LYS B 24 ? ? 61.27 -52.28 148 17 ILE C 21 ? ? 68.25 -55.53 149 17 SER D 4 ? ? 66.62 -58.61 150 17 LYS D 24 ? ? 64.67 -73.63 151 18 ASN A 2 ? ? -69.31 77.72 152 18 ILE A 21 ? ? 69.58 -59.81 153 18 LEU B 2 ? ? 73.33 -42.14 154 18 VAL B 3 ? ? -68.60 70.97 155 18 LYS B 24 ? ? 63.13 -44.52 156 18 ASN C 2 ? ? 70.42 -57.05 157 18 VAL C 5 ? ? -168.46 93.18 158 18 ILE C 21 ? ? 68.36 -58.61 159 18 SER D 4 ? ? -108.14 -63.37 160 18 LYS D 24 ? ? 66.19 -41.78 161 19 ILE A 21 ? ? 70.09 -60.32 162 19 VAL B 3 ? ? 52.25 -69.21 163 19 SER B 4 ? ? -33.64 -71.66 164 19 LYS B 21 ? ? -64.37 -70.55 165 19 LYS B 24 ? ? -147.22 -37.19 166 19 GLU C 4 ? ? 69.21 -54.14 167 19 ILE C 21 ? ? 71.98 -60.14 168 19 LYS D 24 ? ? -68.53 69.70 169 20 ILE A 21 ? ? 71.57 -53.70 170 20 VAL B 3 ? ? -121.00 -76.95 171 20 CYS B 23 ? ? -67.29 61.40 172 20 ILE C 21 ? ? 65.66 -61.32 173 20 VAL D 3 ? ? 13.29 -84.91 174 21 ARG A 3 ? ? 64.27 -67.33 175 21 ILE A 21 ? ? 70.74 -65.51 176 21 LYS B 24 ? ? 57.61 -56.84 177 21 ARG C 3 ? ? 69.60 -59.02 178 21 GLU C 4 ? ? 70.32 -58.73 179 21 ILE C 21 ? ? 67.31 -61.55 180 21 LEU D 2 ? ? 60.31 -65.92 181 21 SER D 4 ? ? 57.10 -122.51 182 21 LYS D 24 ? ? 41.88 25.78 183 22 GLU A 4 ? ? -87.02 -121.41 184 22 ILE A 21 ? ? 69.02 -55.09 185 22 VAL B 3 ? ? 60.26 -73.79 186 22 CYS B 23 ? ? -67.35 61.43 187 22 ASN C 2 ? ? 70.37 -31.16 188 22 ILE C 21 ? ? 68.17 -57.51 189 22 VAL D 3 ? ? 60.30 -73.31 190 22 SER D 4 ? ? -46.65 -71.22 191 22 LYS D 24 ? ? 60.63 -69.52 192 23 ILE A 21 ? ? 66.86 -57.11 193 23 CYS B 23 ? ? -67.74 60.65 194 23 ILE C 21 ? ? 68.67 -56.36 195 23 LYS D 24 ? ? 69.43 -60.81 196 24 ASN A 2 ? ? -69.49 63.71 197 24 ILE A 21 ? ? 71.48 -49.23 198 24 SER B 4 ? ? -36.68 98.73 199 24 LYS B 24 ? ? 62.09 -50.63 200 24 ILE C 21 ? ? 67.94 -60.22 201 24 SER D 4 ? ? -43.77 98.85 202 24 LYS D 24 ? ? 22.04 78.70 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 2 ARG A 3 ? ? 0.083 'SIDE CHAIN' 2 2 ARG A 17 ? ? 0.084 'SIDE CHAIN' 3 2 ARG D 10 ? ? 0.077 'SIDE CHAIN' 4 3 TYR B 12 ? ? 0.064 'SIDE CHAIN' 5 5 TYR B 12 ? ? 0.148 'SIDE CHAIN' 6 6 ARG A 3 ? ? 0.099 'SIDE CHAIN' 7 6 ARG B 10 ? ? 0.099 'SIDE CHAIN' 8 6 TYR D 12 ? ? 0.115 'SIDE CHAIN' 9 7 TYR B 12 ? ? 0.073 'SIDE CHAIN' 10 8 TYR D 12 ? ? 0.064 'SIDE CHAIN' 11 9 TYR B 12 ? ? 0.067 'SIDE CHAIN' 12 10 TYR D 12 ? ? 0.067 'SIDE CHAIN' 13 11 TYR D 12 ? ? 0.125 'SIDE CHAIN' 14 13 TYR B 12 ? ? 0.068 'SIDE CHAIN' 15 14 ARG D 10 ? ? 0.087 'SIDE CHAIN' 16 16 ARG C 3 ? ? 0.088 'SIDE CHAIN' 17 17 TYR B 12 ? ? 0.077 'SIDE CHAIN' 18 18 TYR D 12 ? ? 0.092 'SIDE CHAIN' 19 19 TYR B 12 ? ? 0.074 'SIDE CHAIN' 20 21 TYR B 12 ? ? 0.183 'SIDE CHAIN' 21 23 ARG A 3 ? ? 0.138 'SIDE CHAIN' #