HEADER HYDROLASE 01-OCT-04 1XMB TITLE X-RAY STRUCTURE OF IAA-AMINOACID HYDROLASE FROM ARABIDOPSIS THALIANA TITLE 2 GENE AT5G56660 COMPND MOL_ID: 1; COMPND 2 MOLECULE: IAA-AMINO ACID HYDROLASE HOMOLOG 2; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: ILL2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: B834(DE3) P(LACI+RARE); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PVP-13 KEYWDS STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, PSI, CESG, KEYWDS 2 AT5G56660, ILL2, INDOLE-3-ACETIC ACID, AUXIN, CENTER FOR EUKARYOTIC KEYWDS 3 STRUCTURAL GENOMICS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR G.E.WESENBERG,D.W.SMITH,G.N.PHILLIPS JR.,E.BITTO,C.A.BINGMAN, AUTHOR 2 S.T.M.ALLARD,CENTER FOR EUKARYOTIC STRUCTURAL GENOMICS (CESG) REVDAT 8 14-FEB-24 1XMB 1 REMARK REVDAT 7 11-OCT-17 1XMB 1 REMARK REVDAT 6 30-JAN-13 1XMB 1 AUTHOR JRNL VERSN REVDAT 5 22-JUN-11 1XMB 1 REMARK REVDAT 4 30-DEC-08 1XMB 1 JRNL VERSN REVDAT 3 12-FEB-08 1XMB 1 ATOM DBREF REMARK REVDAT 2 01-FEB-05 1XMB 1 AUTHOR KEYWDS REMARK REVDAT 1 12-OCT-04 1XMB 0 JRNL AUTH E.BITTO,C.A.BINGMAN,L.BITTOVA,N.L.HOUSTON,R.S.BOSTON, JRNL AUTH 2 B.G.FOX,G.N.PHILLIPS JR. JRNL TITL X-RAY STRUCTURE OF ILL2, AN AUXIN-CONJUGATE AMIDOHYDROLASE JRNL TITL 2 FROM ARABIDOPSIS THALIANA. JRNL REF PROTEINS V. 74 61 2009 JRNL REFN ISSN 0887-3585 JRNL PMID 18543330 JRNL DOI 10.1002/PROT.22124 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 29630 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.076 REMARK 3 FREE R VALUE TEST SET COUNT : 1504 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2058 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.40 REMARK 3 BIN R VALUE (WORKING SET) : 0.1860 REMARK 3 BIN FREE R VALUE SET COUNT : 110 REMARK 3 BIN FREE R VALUE : 0.2470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2889 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 285 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.00500 REMARK 3 B22 (A**2) : -0.00500 REMARK 3 B33 (A**2) : 0.00800 REMARK 3 B12 (A**2) : -0.00300 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.145 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.140 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.090 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.155 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2954 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2738 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3993 ; 1.587 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6384 ; 0.838 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 372 ; 6.279 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 124 ;34.503 ;24.113 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 516 ;14.355 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;20.747 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 452 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3259 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 571 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 604 ; 0.209 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2665 ; 0.189 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1442 ; 0.177 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1687 ; 0.088 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 222 ; 0.252 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 8 ; 0.197 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 46 ; 0.279 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 18 ; 0.261 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2385 ; 2.193 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 764 ; 0.353 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2997 ; 2.872 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2563 ; 1.339 ; 4.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1249 ; 5.454 ; 6.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2316 ; 1.828 ; 6.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 996 ; 7.081 ; 8.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3821 ; 3.065 ; 8.000 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL PLUS MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1XMB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-OCT-04. REMARK 100 THE DEPOSITION ID IS D_1000030509. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-AUG-04; 30-JUL-04 REMARK 200 TEMPERATURE (KELVIN) : 110; 110 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; APS REMARK 200 BEAMLINE : 19-BM; 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96411; 0.97932 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK DOUBLE-CRYSTAL REMARK 200 MONOCHROMATOR: WATER COOLED, REMARK 200 SAGITALLY FOCUSING 2ND CRYSTAL; REMARK 200 ROSENBAUM-ROCK DOUBLE-CRYSTAL REMARK 200 MONOCHROMATOR: WATER COOLED, REMARK 200 SAGITALLY FOCUSING 2ND CRYSTAL REMARK 200 OPTICS : ROSENBAUM-ROCK VERTICAL FOCUSING REMARK 200 MIRROR; ROSENBAUM-ROCK VERTICAL REMARK 200 FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : APS-1; APS-1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29672 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 24.210 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 8.400 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 0.33400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE 2.06, RESOLVE 2.06 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10 MG/ML PROTEIN, 0.080 M MAGNESIUM REMARK 280 SULFATE, 14 % PEG 1500, 0.100 M CHES, PH 9.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 87.25333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 43.62667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 43.62667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 87.25333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 22 REMARK 465 GLU A 23 REMARK 465 SER A 24 REMARK 465 PRO A 25 REMARK 465 TRP A 26 REMARK 465 ILE A 27 REMARK 465 ALA A 28 REMARK 465 GLU A 29 REMARK 465 ASP A 30 REMARK 465 THR A 31 REMARK 465 SER A 32 REMARK 465 GLN A 33 REMARK 465 ILE A 34 REMARK 465 GLN A 35 REMARK 465 THR A 36 REMARK 465 GLY A 229 REMARK 465 GLY A 230 REMARK 465 HIS A 231 REMARK 465 ALA A 232 REMARK 465 ALA A 233 REMARK 465 ILE A 234 REMARK 465 PRO A 235 REMARK 465 GLN A 236 REMARK 465 HIS A 237 REMARK 465 GLY A 275 REMARK 465 GLY A 276 REMARK 465 ASN A 277 REMARK 465 ALA A 278 REMARK 465 PHE A 279 REMARK 465 ASN A 280 REMARK 465 VAL A 281 REMARK 465 ILE A 282 REMARK 465 LYS A 429 REMARK 465 GLY A 430 REMARK 465 SER A 431 REMARK 465 VAL A 432 REMARK 465 SER A 433 REMARK 465 GLY A 434 REMARK 465 PHE A 435 REMARK 465 HIS A 436 REMARK 465 GLU A 437 REMARK 465 GLU A 438 REMARK 465 LEU A 439 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 340 O HOH A 641 1.85 REMARK 500 O HOH A 610 O HOH A 611 1.89 REMARK 500 O HOH A 521 O HOH A 691 1.93 REMARK 500 O HOH A 502 O HOH A 623 1.93 REMARK 500 O HOH A 568 O HOH A 573 2.02 REMARK 500 SG CYS A 137 O HOH A 451 2.03 REMARK 500 SG CYS A 137 O HOH A 451 2.05 REMARK 500 O HOH A 475 O HOH A 549 2.06 REMARK 500 NH1 ARG A 210 O HOH A 626 2.10 REMARK 500 OE2 GLU A 155 O HOH A 496 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 718 O HOH A 726 4545 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY A 83 N GLY A 83 CA -0.109 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 76 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG A 76 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 ILE A 82 CA - C - N ANGL. DEV. = 13.1 DEGREES REMARK 500 ILE A 82 O - C - N ANGL. DEV. = -10.9 DEGREES REMARK 500 ASP A 112 CB - CG - OD1 ANGL. DEV. = 6.8 DEGREES REMARK 500 ASP A 112 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ASP A 261 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 MET A 365 CG - SD - CE ANGL. DEV. = 11.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 92 -63.06 80.15 REMARK 500 PHE A 214 -57.16 -125.18 REMARK 500 GLU A 259 -152.08 -135.03 REMARK 500 HIS A 397 -3.69 72.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: GO.22207 RELATED DB: TARGETDB DBREF 1XMB A 22 439 UNP P54970 ILL2_ARATH 22 439 SEQRES 1 A 418 SER GLU SER PRO TRP ILE ALA GLU ASP THR SER GLN ILE SEQRES 2 A 418 GLN THR LYS LEU LEU GLU PHE ALA LYS SER PRO GLU VAL SEQRES 3 A 418 PHE ASP TRP MET VAL LYS ILE ARG ARG LYS ILE HIS GLU SEQRES 4 A 418 ASN PRO GLU LEU GLY TYR GLU GLU LEU GLU THR SER LYS SEQRES 5 A 418 LEU ILE ARG SER GLU LEU GLU LEU ILE GLY ILE LYS TYR SEQRES 6 A 418 ARG TYR PRO VAL ALA ILE THR GLY VAL ILE GLY TYR ILE SEQRES 7 A 418 GLY THR GLY GLU PRO PRO PHE VAL ALA LEU ARG ALA ASP SEQRES 8 A 418 MET ASP ALA LEU PRO ILE GLN GLU GLY VAL GLU TRP GLU SEQRES 9 A 418 HIS LYS SER LYS ILE ALA GLY LYS MET HIS ALA CYS GLY SEQRES 10 A 418 HIS ASP GLY HIS VAL THR MET LEU LEU GLY ALA ALA LYS SEQRES 11 A 418 ILE LEU HIS GLU HIS ARG HIS HIS LEU GLN GLY THR VAL SEQRES 12 A 418 VAL LEU ILE PHE GLN PRO ALA GLU GLU GLY LEU SER GLY SEQRES 13 A 418 ALA LYS LYS MET ARG GLU GLU GLY ALA LEU LYS ASN VAL SEQRES 14 A 418 GLU ALA ILE PHE GLY ILE HIS LEU SER ALA ARG ILE PRO SEQRES 15 A 418 PHE GLY LYS ALA ALA SER ARG ALA GLY SER PHE LEU ALA SEQRES 16 A 418 GLY ALA GLY VAL PHE GLU ALA VAL ILE THR GLY LYS GLY SEQRES 17 A 418 GLY HIS ALA ALA ILE PRO GLN HIS THR ILE ASP PRO VAL SEQRES 18 A 418 VAL ALA ALA SER SER ILE VAL LEU SER LEU GLN GLN LEU SEQRES 19 A 418 VAL SER ARG GLU THR ASP PRO LEU ASP SER LYS VAL VAL SEQRES 20 A 418 THR VAL SER LYS VAL ASN GLY GLY ASN ALA PHE ASN VAL SEQRES 21 A 418 ILE PRO ASP SER ILE THR ILE GLY GLY THR LEU ARG ALA SEQRES 22 A 418 PHE THR GLY PHE THR GLN LEU GLN GLN ARG VAL LYS GLU SEQRES 23 A 418 VAL ILE THR LYS GLN ALA ALA VAL HIS ARG CYS ASN ALA SEQRES 24 A 418 SER VAL ASN LEU THR PRO ASN GLY ARG GLU PRO MET PRO SEQRES 25 A 418 PRO THR VAL ASN ASN LYS ASP LEU TYR LYS GLN PHE LYS SEQRES 26 A 418 LYS VAL VAL ARG ASP LEU LEU GLY GLN GLU ALA PHE VAL SEQRES 27 A 418 GLU ALA ALA PRO VAL MET GLY SER GLU ASP PHE SER TYR SEQRES 28 A 418 PHE ALA GLU THR ILE PRO GLY HIS PHE SER LEU LEU GLY SEQRES 29 A 418 MET GLN ASP GLU THR ASN GLY TYR ALA SER SER HIS SER SEQRES 30 A 418 PRO LEU TYR ARG ILE ASN GLU ASP VAL LEU PRO TYR GLY SEQRES 31 A 418 ALA ALA ILE HIS ALA SER MET ALA VAL GLN TYR LEU LYS SEQRES 32 A 418 GLU LYS ALA SER LYS GLY SER VAL SER GLY PHE HIS GLU SEQRES 33 A 418 GLU LEU FORMUL 2 HOH *285(H2 O) HELIX 1 1 LYS A 37 SER A 44 1 8 HELIX 2 2 SER A 44 ASN A 61 1 18 HELIX 3 3 GLU A 68 GLY A 83 1 16 HELIX 4 4 GLY A 138 HIS A 156 1 19 HELIX 5 5 ARG A 157 LEU A 160 5 4 HELIX 6 6 SER A 176 GLU A 184 1 9 HELIX 7 7 ILE A 239 GLN A 254 1 16 HELIX 8 8 ASP A 261 ASP A 264 5 4 HELIX 9 9 GLY A 297 HIS A 316 1 20 HELIX 10 10 THR A 325 ARG A 329 5 5 HELIX 11 11 ASN A 338 GLY A 354 1 17 HELIX 12 12 ASP A 369 GLU A 375 1 7 HELIX 13 13 ASN A 404 ASP A 406 5 3 HELIX 14 14 VAL A 407 SER A 428 1 22 SHEET 1 A 8 TYR A 86 VAL A 90 0 SHEET 2 A 8 GLY A 94 GLY A 100 -1 O ILE A 96 N ARG A 87 SHEET 3 A 8 THR A 163 GLN A 169 -1 O VAL A 164 N ILE A 99 SHEET 4 A 8 PHE A 106 ASP A 112 1 N LEU A 109 O ILE A 167 SHEET 5 A 8 VAL A 190 PRO A 203 1 O ALA A 192 N ALA A 108 SHEET 6 A 8 GLY A 379 GLN A 387 1 O HIS A 380 N GLY A 195 SHEET 7 A 8 ALA A 207 SER A 209 -1 N ALA A 208 O LEU A 383 SHEET 8 A 8 PHE A 358 GLU A 360 1 O VAL A 359 N ALA A 207 SHEET 1 B 2 GLY A 212 LEU A 215 0 SHEET 2 B 2 THR A 335 ASN A 337 -1 O ASN A 337 N GLY A 212 SHEET 1 C 4 LYS A 266 ASN A 274 0 SHEET 2 C 4 SER A 285 ALA A 294 -1 O THR A 291 N THR A 269 SHEET 3 C 4 GLY A 217 GLY A 227 -1 N ILE A 225 O ILE A 286 SHEET 4 C 4 CYS A 318 ASN A 323 -1 O ASN A 319 N THR A 226 CISPEP 1 ILE A 82 GLY A 83 0 -23.77 CISPEP 2 TYR A 88 PRO A 89 0 -2.40 CISPEP 3 PRO A 104 PRO A 105 0 -2.78 CRYST1 75.264 75.264 130.880 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013287 0.007671 0.000000 0.00000 SCALE2 0.000000 0.015342 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007641 0.00000