data_1XN4 # _entry.id 1XN4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1XN4 RCSB RCSB030538 WWPDB D_1000030538 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id Lmaj001686AAA _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 1XN4 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2004-10-04 _pdbx_database_status.status_code REL _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Caruthers, J.' 1 'Merritt, E.A.' 2 'Structural Genomics of Pathogenic Protozoa Consortium (SGPP)' 3 # _citation.id primary _citation.title ;Crystal structures and proposed structural/functional classification of three protozoan proteins from the isochorismatase superfamily. ; _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 14 _citation.page_first 2887 _citation.page_last 2894 _citation.year 2005 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 0961-8368 _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16199669 _citation.pdbx_database_id_DOI 10.1110/ps.051783005 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Caruthers, J.' 1 primary 'Zucker, F.' 2 primary 'Worthey, E.' 3 primary 'Myler, P.J.' 4 primary 'Buckner, F.' 5 primary 'Van Voorhuis, W.' 6 primary 'Mehlin, C.' 7 primary 'Boni, E.' 8 primary 'Feist, T.' 9 primary 'Luft, J.' 10 primary 'Gulde, S.' 11 primary 'Lauricella, A.' 12 primary 'Kaluzhniy, O.' 13 primary 'Anderson, L.' 14 primary 'Le Trong, I.' 15 primary 'Holmes, M.A.' 16 primary 'Earnest, T.' 17 primary 'Soltis, M.' 18 primary 'Hodgson, K.O.' 19 primary 'Hol, W.G.' 20 primary 'Merritt, E.A.' 21 # _cell.entry_id 1XN4 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.length_a 100.431 _cell.length_b 100.431 _cell.length_c 44.736 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 # _symmetry.entry_id 1XN4 _symmetry.Int_Tables_number 79 _symmetry.space_group_name_H-M 'I 4' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'ribonuclease MAR1' _entity.formula_weight 21615.312 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSRLMPHYSKGKTAFLCVDLQEAFSKRIENFANCVFVANRLARLHELVPENTKYIVTEHYPKGLGRIVPGITLPQTAHLI EKTRFSCIVPQVEELLEDVDNAVVFGIEGHACILQTVADLLDMNKRVFLPKDGLGSQKKTDFKAAMKLMGSWSPNCEITT SESILLQMTKDAMDPNFKKISKLLKEEPPIPL ; _entity_poly.pdbx_seq_one_letter_code_can ;MSRLMPHYSKGKTAFLCVDLQEAFSKRIENFANCVFVANRLARLHELVPENTKYIVTEHYPKGLGRIVPGITLPQTAHLI EKTRFSCIVPQVEELLEDVDNAVVFGIEGHACILQTVADLLDMNKRVFLPKDGLGSQKKTDFKAAMKLMGSWSPNCEITT SESILLQMTKDAMDPNFKKISKLLKEEPPIPL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier Lmaj001686AAA # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 ARG n 1 4 LEU n 1 5 MET n 1 6 PRO n 1 7 HIS n 1 8 TYR n 1 9 SER n 1 10 LYS n 1 11 GLY n 1 12 LYS n 1 13 THR n 1 14 ALA n 1 15 PHE n 1 16 LEU n 1 17 CYS n 1 18 VAL n 1 19 ASP n 1 20 LEU n 1 21 GLN n 1 22 GLU n 1 23 ALA n 1 24 PHE n 1 25 SER n 1 26 LYS n 1 27 ARG n 1 28 ILE n 1 29 GLU n 1 30 ASN n 1 31 PHE n 1 32 ALA n 1 33 ASN n 1 34 CYS n 1 35 VAL n 1 36 PHE n 1 37 VAL n 1 38 ALA n 1 39 ASN n 1 40 ARG n 1 41 LEU n 1 42 ALA n 1 43 ARG n 1 44 LEU n 1 45 HIS n 1 46 GLU n 1 47 LEU n 1 48 VAL n 1 49 PRO n 1 50 GLU n 1 51 ASN n 1 52 THR n 1 53 LYS n 1 54 TYR n 1 55 ILE n 1 56 VAL n 1 57 THR n 1 58 GLU n 1 59 HIS n 1 60 TYR n 1 61 PRO n 1 62 LYS n 1 63 GLY n 1 64 LEU n 1 65 GLY n 1 66 ARG n 1 67 ILE n 1 68 VAL n 1 69 PRO n 1 70 GLY n 1 71 ILE n 1 72 THR n 1 73 LEU n 1 74 PRO n 1 75 GLN n 1 76 THR n 1 77 ALA n 1 78 HIS n 1 79 LEU n 1 80 ILE n 1 81 GLU n 1 82 LYS n 1 83 THR n 1 84 ARG n 1 85 PHE n 1 86 SER n 1 87 CYS n 1 88 ILE n 1 89 VAL n 1 90 PRO n 1 91 GLN n 1 92 VAL n 1 93 GLU n 1 94 GLU n 1 95 LEU n 1 96 LEU n 1 97 GLU n 1 98 ASP n 1 99 VAL n 1 100 ASP n 1 101 ASN n 1 102 ALA n 1 103 VAL n 1 104 VAL n 1 105 PHE n 1 106 GLY n 1 107 ILE n 1 108 GLU n 1 109 GLY n 1 110 HIS n 1 111 ALA n 1 112 CYS n 1 113 ILE n 1 114 LEU n 1 115 GLN n 1 116 THR n 1 117 VAL n 1 118 ALA n 1 119 ASP n 1 120 LEU n 1 121 LEU n 1 122 ASP n 1 123 MET n 1 124 ASN n 1 125 LYS n 1 126 ARG n 1 127 VAL n 1 128 PHE n 1 129 LEU n 1 130 PRO n 1 131 LYS n 1 132 ASP n 1 133 GLY n 1 134 LEU n 1 135 GLY n 1 136 SER n 1 137 GLN n 1 138 LYS n 1 139 LYS n 1 140 THR n 1 141 ASP n 1 142 PHE n 1 143 LYS n 1 144 ALA n 1 145 ALA n 1 146 MET n 1 147 LYS n 1 148 LEU n 1 149 MET n 1 150 GLY n 1 151 SER n 1 152 TRP n 1 153 SER n 1 154 PRO n 1 155 ASN n 1 156 CYS n 1 157 GLU n 1 158 ILE n 1 159 THR n 1 160 THR n 1 161 SER n 1 162 GLU n 1 163 SER n 1 164 ILE n 1 165 LEU n 1 166 LEU n 1 167 GLN n 1 168 MET n 1 169 THR n 1 170 LYS n 1 171 ASP n 1 172 ALA n 1 173 MET n 1 174 ASP n 1 175 PRO n 1 176 ASN n 1 177 PHE n 1 178 LYS n 1 179 LYS n 1 180 ILE n 1 181 SER n 1 182 LYS n 1 183 LEU n 1 184 LEU n 1 185 LYS n 1 186 GLU n 1 187 GLU n 1 188 PRO n 1 189 PRO n 1 190 ILE n 1 191 PRO n 1 192 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Leishmania _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Leishmania major' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5664 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET3a _entity_src_gen.plasmid_details 'SGPP target construct Lmaj001686AAA' _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name UNP _struct_ref.db_code Q4QGT7_LEIMA _struct_ref.pdbx_db_accession Q4QGT7 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1XN4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 192 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q4QGT7 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 192 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 192 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1XN4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.61 _exptl_crystal.density_percent_sol 52.86 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 290 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.20 _exptl_crystal_grow.pdbx_details '16% PEG 8000, 0.1 M K2HPO4, 0.1M MOPS pH7.2, VAPOR DIFFUSION, SITTING DROP, temperature 290K, pH 7.20' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2003-11-13 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.pdbx_wavelength 0.9795 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1XN4 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 3.800 _reflns.number_obs 2294 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.126 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.700 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 3.80 _reflns_shell.d_res_low 3.94 _reflns_shell.percent_possible_all 99.6 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 3.50 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1XN4 _refine.ls_number_reflns_obs 2289 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.86 _refine.ls_d_res_high 3.80 _refine.ls_percent_reflns_obs 99.7 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.313 _refine.ls_R_factor_R_free 0.312 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.412 _refine.ls_number_reflns_R_free 101 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.868 _refine.correlation_coeff_Fo_to_Fc_free 0.898 _refine.B_iso_mean 70.43 _refine.aniso_B[1][1] -1.37800 _refine.aniso_B[2][2] -1.37800 _refine.aniso_B[3][3] 2.75600 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 1X9G' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.998 _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1504 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1504 _refine_hist.d_res_high 3.80 _refine_hist.d_res_low 40.86 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.006 0.022 ? 1534 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 0.893 1.989 ? 2074 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 3.508 5.000 ? 190 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 29.844 24.839 ? 62 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.242 15.000 ? 289 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 10.422 15.000 ? 7 'X-RAY DIFFRACTION' ? r_chiral_restr 0.054 0.200 ? 240 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.001 0.020 ? 1122 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.177 0.200 ? 691 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.295 0.200 ? 1050 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.091 0.200 ? 36 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.152 0.200 ? 35 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.030 0.200 ? 2 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.145 1.500 ? 992 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.263 2.000 ? 1560 'X-RAY DIFFRACTION' ? r_scbond_it 0.023 3.000 ? 602 'X-RAY DIFFRACTION' ? r_scangle_it 0.036 4.500 ? 514 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 3.80 _refine_ls_shell.d_res_low 3.90 _refine_ls_shell.number_reflns_R_work 167 _refine_ls_shell.R_factor_R_work 0.464 _refine_ls_shell.percent_reflns_obs 98.30 _refine_ls_shell.R_factor_R_free 0.304 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 6 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1XN4 _struct.title 'PUTATIVE MAR1 RIBONUCLEASE FROM LEISHMANIA MAJOR' _struct.pdbx_descriptor 'ribonuclease MAR1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, SGPP, PSI, Structural Genomics of Pathogenic Protozoa Consortium, UNKNOWN FUNCTION ; _struct_keywords.entry_id 1XN4 # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 21 ? SER A 25 ? GLN A 21 SER A 25 5 ? 5 HELX_P HELX_P2 2 ASN A 30 ? VAL A 48 ? ASN A 30 VAL A 48 1 ? 19 HELX_P HELX_P3 3 VAL A 89 ? GLU A 94 ? VAL A 89 GLU A 94 1 ? 6 HELX_P HELX_P4 4 LEU A 95 ? GLU A 97 ? LEU A 95 GLU A 97 5 ? 3 HELX_P HELX_P5 5 ALA A 111 ? MET A 123 ? ALA A 111 MET A 123 1 ? 13 HELX_P HELX_P6 6 ASP A 132 ? LEU A 134 ? ASP A 132 LEU A 134 5 ? 3 HELX_P HELX_P7 7 LYS A 138 ? GLY A 150 ? LYS A 138 GLY A 150 1 ? 13 HELX_P HELX_P8 8 THR A 160 ? THR A 169 ? THR A 160 THR A 169 1 ? 10 HELX_P HELX_P9 9 ASN A 176 ? LYS A 185 ? ASN A 176 LYS A 185 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ILE 107 A . ? ILE 107 A GLU 108 A ? GLU 108 A 1 2.34 2 SER 153 A . ? SER 153 A PRO 154 A ? PRO 154 A 1 3.30 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 77 ? LYS A 82 ? ALA A 77 LYS A 82 A 2 THR A 52 ? HIS A 59 ? THR A 52 HIS A 59 A 3 THR A 13 ? VAL A 18 ? THR A 13 VAL A 18 A 4 ASN A 101 ? GLY A 106 ? ASN A 101 GLY A 106 A 5 ARG A 126 ? PRO A 130 ? ARG A 126 PRO A 130 A 6 CYS A 156 ? THR A 159 ? CYS A 156 THR A 159 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O HIS A 78 ? O HIS A 78 N TYR A 54 ? N TYR A 54 A 2 3 O LYS A 53 ? O LYS A 53 N PHE A 15 ? N PHE A 15 A 3 4 N LEU A 16 ? N LEU A 16 O VAL A 103 ? O VAL A 103 A 4 5 N ALA A 102 ? N ALA A 102 O PHE A 128 ? O PHE A 128 A 5 6 N LEU A 129 ? N LEU A 129 O GLU A 157 ? O GLU A 157 # _atom_sites.entry_id 1XN4 _atom_sites.fract_transf_matrix[1][1] 0.009957 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009957 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022353 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 ARG 3 3 3 ARG ARG A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 MET 5 5 5 MET MET A . n A 1 6 PRO 6 6 6 PRO PRO A . n A 1 7 HIS 7 7 7 HIS HIS A . n A 1 8 TYR 8 8 8 TYR TYR A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 PHE 15 15 15 PHE PHE A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 CYS 17 17 17 CYS CYS A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 PHE 24 24 24 PHE PHE A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 ARG 27 27 27 ARG ARG A . n A 1 28 ILE 28 28 28 ILE ILE A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 ASN 30 30 30 ASN ASN A . n A 1 31 PHE 31 31 31 PHE PHE A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 ASN 33 33 33 ASN ASN A . n A 1 34 CYS 34 34 34 CYS CYS A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 PHE 36 36 36 PHE PHE A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 ARG 43 43 43 ARG ARG A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 HIS 45 45 45 HIS HIS A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 PRO 49 49 49 PRO PRO A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 THR 52 52 52 THR THR A . n A 1 53 LYS 53 53 53 LYS LYS A . n A 1 54 TYR 54 54 54 TYR TYR A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 THR 57 57 57 THR THR A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 HIS 59 59 59 HIS HIS A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 LYS 62 62 62 LYS LYS A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 ARG 66 66 66 ARG ARG A . n A 1 67 ILE 67 67 67 ILE ILE A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 PRO 69 69 69 PRO PRO A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 THR 72 72 72 THR THR A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 PRO 74 74 74 PRO PRO A . n A 1 75 GLN 75 75 75 GLN GLN A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 HIS 78 78 78 HIS HIS A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 THR 83 83 83 THR THR A . n A 1 84 ARG 84 84 84 ARG ARG A . n A 1 85 PHE 85 85 85 PHE PHE A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 CYS 87 87 87 CYS CYS A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 PRO 90 90 90 PRO PRO A . n A 1 91 GLN 91 91 91 GLN GLN A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 ASP 100 100 100 ASP ASP A . n A 1 101 ASN 101 101 101 ASN ASN A . n A 1 102 ALA 102 102 102 ALA ALA A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 VAL 104 104 104 VAL VAL A . n A 1 105 PHE 105 105 105 PHE PHE A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 GLU 108 108 108 GLU GLU A . n A 1 109 GLY 109 109 109 GLY GLY A . n A 1 110 HIS 110 110 110 HIS HIS A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 CYS 112 112 112 CYS CYS A . n A 1 113 ILE 113 113 113 ILE ILE A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 GLN 115 115 115 GLN GLN A . n A 1 116 THR 116 116 116 THR THR A . n A 1 117 VAL 117 117 117 VAL VAL A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 ASP 119 119 119 ASP ASP A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 LEU 121 121 121 LEU LEU A . n A 1 122 ASP 122 122 122 ASP ASP A . n A 1 123 MET 123 123 123 MET MET A . n A 1 124 ASN 124 124 124 ASN ASN A . n A 1 125 LYS 125 125 125 LYS LYS A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 VAL 127 127 127 VAL VAL A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 PRO 130 130 130 PRO PRO A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 ASP 132 132 132 ASP ASP A . n A 1 133 GLY 133 133 133 GLY GLY A . n A 1 134 LEU 134 134 134 LEU LEU A . n A 1 135 GLY 135 135 135 GLY GLY A . n A 1 136 SER 136 136 136 SER SER A . n A 1 137 GLN 137 137 137 GLN GLN A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 LYS 139 139 139 LYS LYS A . n A 1 140 THR 140 140 140 THR THR A . n A 1 141 ASP 141 141 141 ASP ASP A . n A 1 142 PHE 142 142 142 PHE PHE A . n A 1 143 LYS 143 143 143 LYS LYS A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 ALA 145 145 145 ALA ALA A . n A 1 146 MET 146 146 146 MET MET A . n A 1 147 LYS 147 147 147 LYS LYS A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 MET 149 149 149 MET MET A . n A 1 150 GLY 150 150 150 GLY GLY A . n A 1 151 SER 151 151 151 SER SER A . n A 1 152 TRP 152 152 152 TRP TRP A . n A 1 153 SER 153 153 153 SER SER A . n A 1 154 PRO 154 154 154 PRO PRO A . n A 1 155 ASN 155 155 155 ASN ASN A . n A 1 156 CYS 156 156 156 CYS CYS A . n A 1 157 GLU 157 157 157 GLU GLU A . n A 1 158 ILE 158 158 158 ILE ILE A . n A 1 159 THR 159 159 159 THR THR A . n A 1 160 THR 160 160 160 THR THR A . n A 1 161 SER 161 161 161 SER SER A . n A 1 162 GLU 162 162 162 GLU GLU A . n A 1 163 SER 163 163 163 SER SER A . n A 1 164 ILE 164 164 164 ILE ILE A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 LEU 166 166 166 LEU LEU A . n A 1 167 GLN 167 167 167 GLN GLN A . n A 1 168 MET 168 168 168 MET MET A . n A 1 169 THR 169 169 169 THR THR A . n A 1 170 LYS 170 170 170 LYS LYS A . n A 1 171 ASP 171 171 171 ASP ASP A . n A 1 172 ALA 172 172 172 ALA ALA A . n A 1 173 MET 173 173 173 MET MET A . n A 1 174 ASP 174 174 174 ASP ASP A . n A 1 175 PRO 175 175 175 PRO PRO A . n A 1 176 ASN 176 176 176 ASN ASN A . n A 1 177 PHE 177 177 177 PHE PHE A . n A 1 178 LYS 178 178 178 LYS LYS A . n A 1 179 LYS 179 179 179 LYS LYS A . n A 1 180 ILE 180 180 180 ILE ILE A . n A 1 181 SER 181 181 181 SER SER A . n A 1 182 LYS 182 182 182 LYS LYS A . n A 1 183 LEU 183 183 183 LEU LEU A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 LYS 185 185 185 LYS LYS A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 GLU 187 187 187 GLU GLU A . n A 1 188 PRO 188 188 188 PRO PRO A . n A 1 189 PRO 189 189 189 PRO PRO A . n A 1 190 ILE 190 190 190 ILE ILE A . n A 1 191 PRO 191 191 191 PRO PRO A . n A 1 192 LEU 192 192 192 LEU LEU A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Structural Genomics of Pathogenic Protozoa Consortium' _pdbx_SG_project.initial_of_center SGPP # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8130 ? 1 MORE -37 ? 1 'SSA (A^2)' 31070 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_755 -x+2,-y,z -1.0000000000 0.0000000000 0.0000000000 200.8620000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_645 -y+1,x-1,z 0.0000000000 -1.0000000000 0.0000000000 100.4310000000 1.0000000000 0.0000000000 0.0000000000 -100.4310000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_665 y+1,-x+1,z 0.0000000000 1.0000000000 0.0000000000 100.4310000000 -1.0000000000 0.0000000000 0.0000000000 100.4310000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-10-12 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-10-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Version format compliance' 5 4 'Structure model' 'Database references' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 95.3940 _pdbx_refine_tls.origin_y 22.3060 _pdbx_refine_tls.origin_z 30.0180 _pdbx_refine_tls.T[1][1] 0.6480 _pdbx_refine_tls.T[2][2] 0.5430 _pdbx_refine_tls.T[3][3] 0.7063 _pdbx_refine_tls.T[1][2] 0.1291 _pdbx_refine_tls.T[1][3] -0.1044 _pdbx_refine_tls.T[2][3] 0.0850 _pdbx_refine_tls.L[1][1] 6.5473 _pdbx_refine_tls.L[2][2] 10.7128 _pdbx_refine_tls.L[3][3] 5.2698 _pdbx_refine_tls.L[1][2] -0.5820 _pdbx_refine_tls.L[1][3] 0.9255 _pdbx_refine_tls.L[2][3] 1.3390 _pdbx_refine_tls.S[1][1] -0.0553 _pdbx_refine_tls.S[1][2] 0.0674 _pdbx_refine_tls.S[1][3] 2.2659 _pdbx_refine_tls.S[2][1] -0.0284 _pdbx_refine_tls.S[2][2] -0.0390 _pdbx_refine_tls.S[2][3] 0.6675 _pdbx_refine_tls.S[3][1] -0.0788 _pdbx_refine_tls.S[3][2] -0.1242 _pdbx_refine_tls.S[3][3] 0.0943 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 2 _pdbx_refine_tls_group.beg_auth_seq_id 2 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 192 _pdbx_refine_tls_group.end_auth_seq_id 192 _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # _phasing.method MR # loop_ _software.citation_id _software.classification _software.contact_author _software.contact_author_email _software.date _software.description _software.language _software.location _software.name _software.type _software.version _software.pdbx_ordinal ? 'data scaling' 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu . . . http://www.lnls.br/infra/linhasluz/denzo-hkl.htm SCALEPACK package . 1 ? refinement 'Garib N. Murshudov' garib@ysbl.york.ac.uk . '(un)restrained refinement or idealisation of macromolecularstructures' . . REFMAC . 'refmac_5.2.0005 24/04/2001' 2 ? phasing ? ? ? ? ? ? EPMR ? . 3 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE This protein is a putative homologue of the MAR1 endoribonuclease from L tarentolae, SPTR O77166. The closest Genbank sequence is the homologous protein from L Major, Genbank identifier LmjF12.0060. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 60 ? ? 41.59 70.93 2 1 LEU A 64 ? ? 54.17 72.72 3 1 ARG A 66 ? ? -171.39 128.49 4 1 CYS A 87 ? ? -77.67 30.06 5 1 ILE A 107 ? ? -173.27 137.49 6 1 ALA A 111 ? ? -104.55 -94.63 7 1 THR A 159 ? ? -120.83 -141.91 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id MET _pdbx_unobs_or_zero_occ_residues.auth_seq_id 1 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id MET _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 #